Query 024536
Match_columns 266
No_of_seqs 219 out of 1122
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 09:58:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024536.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024536hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.8 1.1E-17 3.8E-22 132.3 15.2 99 134-234 27-125 (126)
2 4ga2_A E3 SUMO-protein ligase 99.7 2.4E-18 8.2E-23 139.4 8.7 112 133-246 10-121 (150)
3 4ga2_A E3 SUMO-protein ligase 99.7 5.6E-17 1.9E-21 131.3 14.1 105 134-240 45-150 (150)
4 2pl2_A Hypothetical conserved 99.7 3.7E-17 1.3E-21 139.4 13.0 110 134-245 19-139 (217)
5 2pl2_A Hypothetical conserved 99.7 5.7E-17 2E-21 138.2 13.1 113 134-249 98-210 (217)
6 4gyw_A UDP-N-acetylglucosamine 99.7 7.1E-17 2.4E-21 163.6 15.6 109 134-244 23-131 (723)
7 3gyz_A Chaperone protein IPGC; 99.7 4.5E-18 1.5E-22 140.3 5.5 106 140-247 22-127 (151)
8 4gyw_A UDP-N-acetylglucosamine 99.7 3E-16 1E-20 159.0 16.3 110 134-245 57-166 (723)
9 3urz_A Uncharacterized protein 99.7 1.6E-16 5.6E-21 134.5 11.8 106 134-241 18-139 (208)
10 2vgx_A Chaperone SYCD; alterna 99.7 6.6E-17 2.3E-21 131.0 7.6 103 141-245 8-110 (148)
11 4gco_A Protein STI-1; structur 99.7 1.1E-16 3.8E-21 126.6 8.4 102 145-248 4-105 (126)
12 2vyi_A SGTA protein; chaperone 99.7 3.6E-15 1.2E-19 112.1 16.3 106 134-241 26-131 (131)
13 3upv_A Heat shock protein STI1 99.7 1.9E-15 6.4E-20 116.5 14.9 101 134-236 18-124 (126)
14 3sz7_A HSC70 cochaperone (SGT) 99.7 6.9E-16 2.4E-20 124.7 12.9 100 134-235 25-124 (164)
15 3gyz_A Chaperone protein IPGC; 99.7 1.4E-15 4.8E-20 125.3 14.4 89 134-224 50-138 (151)
16 2h6f_A Protein farnesyltransfe 99.7 5.6E-16 1.9E-20 145.6 13.4 111 134-246 111-222 (382)
17 3vtx_A MAMA; tetratricopeptide 99.7 1.4E-15 4.9E-20 123.8 14.1 111 134-246 19-163 (184)
18 4i17_A Hypothetical protein; T 99.6 2.7E-15 9.1E-20 126.5 14.3 113 134-248 21-141 (228)
19 2lni_A Stress-induced-phosphop 99.6 2.1E-15 7.2E-20 114.6 12.3 104 134-239 30-133 (133)
20 2xcb_A PCRH, regulatory protei 99.6 3.3E-16 1.1E-20 124.5 8.1 103 141-245 5-107 (142)
21 2e2e_A Formate-dependent nitri 99.6 6.9E-16 2.3E-20 125.5 10.0 114 134-248 24-139 (177)
22 2vgx_A Chaperone SYCD; alterna 99.6 2.2E-15 7.5E-20 122.0 12.4 93 134-228 35-127 (148)
23 3vtx_A MAMA; tetratricopeptide 99.6 7.9E-15 2.7E-19 119.3 15.6 90 134-225 87-176 (184)
24 1a17_A Serine/threonine protei 99.6 5.3E-15 1.8E-19 116.8 13.7 111 134-246 27-139 (166)
25 3k9i_A BH0479 protein; putativ 99.6 8.5E-16 2.9E-20 118.2 8.7 108 133-242 3-113 (117)
26 2xcb_A PCRH, regulatory protei 99.6 4.4E-15 1.5E-19 117.9 12.7 98 134-233 32-129 (142)
27 1na0_A Designed protein CTPR3; 99.6 3E-14 1E-18 106.2 16.1 103 134-238 23-125 (125)
28 2fo7_A Synthetic consensus TPR 99.6 7.8E-15 2.7E-19 110.0 13.0 112 134-247 15-126 (136)
29 1zu2_A Mitochondrial import re 99.6 3.1E-15 1.1E-19 125.9 11.7 98 134-232 16-133 (158)
30 3rkv_A Putative peptidylprolyl 99.6 3.6E-15 1.2E-19 120.3 11.7 109 134-244 25-152 (162)
31 2h6f_A Protein farnesyltransfe 99.6 3.2E-15 1.1E-19 140.4 12.8 108 135-244 147-255 (382)
32 1p5q_A FKBP52, FK506-binding p 99.6 6E-15 2.1E-19 134.7 13.9 109 134-244 161-284 (336)
33 1hxi_A PEX5, peroxisome target 99.6 3.9E-15 1.3E-19 116.6 10.9 90 134-225 31-120 (121)
34 1elw_A TPR1-domain of HOP; HOP 99.6 3.2E-14 1.1E-18 105.2 15.3 99 134-234 18-116 (118)
35 3as5_A MAMA; tetratricopeptide 99.6 2.9E-14 9.8E-19 113.1 15.5 111 134-246 56-166 (186)
36 2fbn_A 70 kDa peptidylprolyl i 99.6 1.4E-14 4.8E-19 120.5 13.4 109 134-244 52-176 (198)
37 4i17_A Hypothetical protein; T 99.6 2.5E-15 8.5E-20 126.7 8.6 105 134-240 56-169 (228)
38 1wao_1 Serine/threonine protei 99.6 1.8E-14 6.1E-19 138.3 15.0 113 134-248 20-134 (477)
39 4eqf_A PEX5-related protein; a 99.6 1.8E-14 6.3E-19 128.8 13.9 111 134-246 191-303 (365)
40 3q49_B STIP1 homology and U bo 99.6 1.7E-14 5.7E-19 111.5 11.8 102 134-237 23-129 (137)
41 4gcn_A Protein STI-1; structur 99.6 3.4E-14 1.2E-18 111.9 13.4 94 134-230 22-122 (127)
42 2pzi_A Probable serine/threoni 99.6 6.3E-15 2.2E-19 147.0 10.7 117 134-253 447-563 (681)
43 2q7f_A YRRB protein; TPR, prot 99.6 4.2E-14 1.4E-18 118.0 13.9 110 134-245 105-214 (243)
44 2dba_A Smooth muscle cell asso 99.6 5.7E-14 1.9E-18 108.8 13.1 100 134-235 42-144 (148)
45 1w3b_A UDP-N-acetylglucosamine 99.6 2.5E-14 8.5E-19 129.2 12.6 110 134-245 251-360 (388)
46 2q7f_A YRRB protein; TPR, prot 99.6 1.2E-13 4E-18 115.3 15.7 111 134-246 71-181 (243)
47 1w3b_A UDP-N-acetylglucosamine 99.6 3.6E-14 1.2E-18 128.2 13.4 113 134-248 217-329 (388)
48 2xev_A YBGF; tetratricopeptide 99.6 2E-13 6.8E-18 104.3 15.6 104 134-239 16-125 (129)
49 3as5_A MAMA; tetratricopeptide 99.6 3.9E-14 1.3E-18 112.3 12.0 111 134-246 22-132 (186)
50 1xnf_A Lipoprotein NLPI; TPR, 99.5 1E-14 3.5E-19 124.0 8.4 111 134-246 19-133 (275)
51 3uq3_A Heat shock protein STI1 99.5 6.2E-14 2.1E-18 117.4 13.0 111 134-246 93-229 (258)
52 2vsy_A XCC0866; transferase, g 99.5 3E-14 1E-18 137.2 12.1 111 134-246 37-150 (568)
53 2vsy_A XCC0866; transferase, g 99.5 1.8E-14 6.2E-19 138.8 10.5 111 134-246 3-113 (568)
54 3upv_A Heat shock protein STI1 99.5 5.9E-14 2E-18 108.1 11.4 94 151-246 1-94 (126)
55 1fch_A Peroxisomal targeting s 99.5 1E-13 3.5E-18 122.9 14.5 111 134-246 195-307 (368)
56 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 3E-14 1E-18 135.6 11.3 109 134-244 282-405 (457)
57 2ho1_A Type 4 fimbrial biogene 99.5 9.6E-14 3.3E-18 117.3 13.2 112 134-247 85-198 (252)
58 2hr2_A Hypothetical protein; a 99.5 1.7E-14 5.9E-19 121.4 8.3 98 134-233 25-145 (159)
59 1fch_A Peroxisomal targeting s 99.5 1E-13 3.5E-18 122.9 13.7 90 134-225 231-320 (368)
60 1hh8_A P67PHOX, NCF-2, neutrop 99.5 6.2E-14 2.1E-18 116.0 11.5 107 134-245 20-142 (213)
61 2r5s_A Uncharacterized protein 99.5 7.4E-15 2.5E-19 120.4 5.8 112 134-247 20-131 (176)
62 1xnf_A Lipoprotein NLPI; TPR, 99.5 1.8E-13 6.1E-18 116.3 14.6 109 134-245 57-165 (275)
63 4abn_A Tetratricopeptide repea 99.5 2.4E-14 8.3E-19 136.5 10.2 110 134-245 193-313 (474)
64 3hym_B Cell division cycle pro 99.5 9.3E-14 3.2E-18 120.5 12.5 113 134-248 173-294 (330)
65 2vq2_A PILW, putative fimbrial 99.5 1.7E-13 5.7E-18 112.5 13.4 110 134-245 56-168 (225)
66 3u4t_A TPR repeat-containing p 99.5 6.6E-14 2.3E-18 119.3 11.3 116 134-252 17-136 (272)
67 2vq2_A PILW, putative fimbrial 99.5 2.2E-13 7.6E-18 111.7 14.0 112 134-247 22-136 (225)
68 3qou_A Protein YBBN; thioredox 99.5 1.2E-13 4.2E-18 122.8 13.4 109 134-244 131-275 (287)
69 2kck_A TPR repeat; tetratricop 99.5 3.3E-14 1.1E-18 104.5 8.0 97 150-248 2-101 (112)
70 4abn_A Tetratricopeptide repea 99.5 2.9E-14 9.9E-19 136.0 9.7 110 134-246 116-243 (474)
71 3cv0_A Peroxisome targeting si 99.5 2E-13 6.9E-18 118.2 14.0 110 134-245 152-261 (327)
72 4eqf_A PEX5-related protein; a 99.5 1.1E-13 3.9E-18 123.6 12.8 113 134-248 227-351 (365)
73 1elr_A TPR2A-domain of HOP; HO 99.5 2.3E-13 7.8E-18 102.4 12.5 103 134-239 18-127 (131)
74 3q49_B STIP1 homology and U bo 99.5 2.5E-13 8.5E-18 104.8 12.8 97 148-246 3-99 (137)
75 3cv0_A Peroxisome targeting si 99.5 2.5E-13 8.5E-18 117.6 14.1 104 134-239 186-294 (327)
76 1ihg_A Cyclophilin 40; ppiase 99.5 5.2E-14 1.8E-18 131.1 10.4 111 134-246 237-363 (370)
77 2ho1_A Type 4 fimbrial biogene 99.5 1.3E-13 4.5E-18 116.4 12.0 112 134-247 51-164 (252)
78 3sz7_A HSC70 cochaperone (SGT) 99.5 1.3E-13 4.5E-18 111.2 11.5 95 150-246 7-101 (164)
79 2kat_A Uncharacterized protein 99.5 2.1E-13 7E-18 103.8 11.6 101 137-239 2-104 (115)
80 3hym_B Cell division cycle pro 99.5 1.8E-13 6.2E-18 118.6 12.3 109 135-245 106-214 (330)
81 2pzi_A Probable serine/threoni 99.5 9.9E-14 3.4E-18 138.4 12.1 111 133-246 404-522 (681)
82 2ond_A Cleavage stimulation fa 99.5 9.6E-14 3.3E-18 123.7 10.5 115 137-252 33-162 (308)
83 3u4t_A TPR repeat-containing p 99.5 2.9E-13 9.9E-18 115.3 12.8 109 134-245 88-200 (272)
84 2l6j_A TPR repeat-containing p 99.5 4.7E-13 1.6E-17 99.3 12.1 95 153-249 3-103 (111)
85 3uq3_A Heat shock protein STI1 99.5 1.9E-13 6.6E-18 114.4 11.1 112 134-247 52-196 (258)
86 3mkr_A Coatomer subunit epsilo 99.5 7.5E-13 2.6E-17 118.5 15.5 110 134-244 144-254 (291)
87 4gcn_A Protein STI-1; structur 99.5 1.9E-13 6.4E-18 107.6 10.2 93 152-246 6-105 (127)
88 3qky_A Outer membrane assembly 99.5 1.8E-13 6.3E-18 117.9 10.6 114 134-248 29-172 (261)
89 3ieg_A DNAJ homolog subfamily 99.5 2.8E-13 9.7E-18 118.2 11.7 112 134-247 17-143 (359)
90 1p5q_A FKBP52, FK506-binding p 99.5 1.3E-14 4.6E-19 132.4 2.7 112 134-247 127-253 (336)
91 2kck_A TPR repeat; tetratricop 99.5 9.2E-13 3.1E-17 96.6 11.9 89 134-224 20-111 (112)
92 2r5s_A Uncharacterized protein 99.4 2.3E-13 7.8E-18 111.5 9.1 111 134-246 54-166 (176)
93 3urz_A Uncharacterized protein 99.4 1.3E-13 4.3E-18 116.6 7.8 113 134-248 68-181 (208)
94 2e2e_A Formate-dependent nitri 99.4 1.1E-12 3.7E-17 106.4 12.9 93 134-227 58-152 (177)
95 1hxi_A PEX5, peroxisome target 99.4 2.4E-13 8.3E-18 106.3 8.7 91 156-248 19-109 (121)
96 3ieg_A DNAJ homolog subfamily 99.4 8.7E-13 3E-17 115.1 12.8 111 134-246 51-176 (359)
97 1na3_A Designed protein CTPR2; 99.4 1.9E-12 6.6E-17 92.8 11.9 85 152-238 7-91 (91)
98 2ond_A Cleavage stimulation fa 99.4 5.5E-13 1.9E-17 118.7 11.0 115 134-249 113-228 (308)
99 3fp2_A TPR repeat-containing p 99.4 1.4E-12 4.7E-17 121.5 13.6 111 134-246 290-400 (537)
100 2if4_A ATFKBP42; FKBP-like, al 99.4 1.9E-13 6.5E-18 125.0 7.5 110 134-245 193-320 (338)
101 2c2l_A CHIP, carboxy terminus 99.4 7.4E-13 2.5E-17 117.6 10.7 88 134-223 18-105 (281)
102 2xpi_A Anaphase-promoting comp 99.4 1.6E-12 5.3E-17 123.2 13.4 111 134-246 455-572 (597)
103 2y4t_A DNAJ homolog subfamily 99.4 1.4E-12 4.9E-17 118.9 12.4 113 134-248 40-167 (450)
104 2yhc_A BAMD, UPF0169 lipoprote 99.4 1.1E-12 3.8E-17 111.6 10.8 113 134-247 55-207 (225)
105 3qky_A Outer membrane assembly 99.4 5.7E-13 2E-17 114.8 9.1 112 134-247 66-218 (261)
106 2lni_A Stress-induced-phosphop 99.4 1.2E-12 4.2E-17 99.1 9.9 96 150-247 12-107 (133)
107 2y4t_A DNAJ homolog subfamily 99.4 3.5E-12 1.2E-16 116.4 14.2 114 134-249 225-354 (450)
108 2xpi_A Anaphase-promoting comp 99.4 3.3E-12 1.1E-16 121.0 14.5 111 134-246 387-497 (597)
109 2yhc_A BAMD, UPF0169 lipoprote 99.4 9.2E-13 3.2E-17 112.2 9.2 114 134-248 18-171 (225)
110 1elw_A TPR1-domain of HOP; HOP 99.4 3.4E-12 1.1E-16 94.2 11.0 94 153-248 3-96 (118)
111 1hh8_A P67PHOX, NCF-2, neutrop 99.4 8E-12 2.7E-16 103.2 14.3 101 134-236 51-167 (213)
112 1qqe_A Vesicular transport pro 99.4 1.2E-12 4.2E-17 116.0 9.9 112 134-247 91-222 (292)
113 1na0_A Designed protein CTPR3; 99.4 3.9E-12 1.4E-16 94.5 11.0 97 149-247 3-100 (125)
114 2vyi_A SGTA protein; chaperone 99.4 1.3E-12 4.5E-17 97.9 8.3 98 148-247 6-103 (131)
115 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 1.1E-13 3.8E-18 131.7 2.6 113 134-248 248-375 (457)
116 3mkr_A Coatomer subunit epsilo 99.4 8.9E-12 3E-16 111.5 14.7 105 134-244 180-285 (291)
117 3edt_B KLC 2, kinesin light ch 99.4 9.6E-13 3.3E-17 111.0 7.7 111 134-246 57-191 (283)
118 2dba_A Smooth muscle cell asso 99.4 2.5E-12 8.7E-17 99.3 9.2 99 147-247 21-122 (148)
119 3fp2_A TPR repeat-containing p 99.3 2.6E-12 8.8E-17 119.6 10.4 111 134-247 257-367 (537)
120 1qqe_A Vesicular transport pro 99.3 1.1E-12 3.8E-17 116.3 7.5 114 134-249 51-183 (292)
121 2fbn_A 70 kDa peptidylprolyl i 99.3 3.5E-13 1.2E-17 111.9 3.9 114 132-247 16-145 (198)
122 2hr2_A Hypothetical protein; a 99.3 5.5E-12 1.9E-16 106.1 10.7 91 154-246 11-124 (159)
123 4g1t_A Interferon-induced prot 99.3 2.8E-12 9.7E-17 118.2 9.0 114 134-247 152-270 (472)
124 3ma5_A Tetratricopeptide repea 99.3 1.2E-11 4.1E-16 93.1 10.7 90 149-240 2-93 (100)
125 2fo7_A Synthetic consensus TPR 99.3 3.2E-11 1.1E-15 90.0 12.9 88 134-223 49-136 (136)
126 3rkv_A Putative peptidylprolyl 99.3 7.2E-12 2.4E-16 100.7 9.9 91 154-246 11-119 (162)
127 3edt_B KLC 2, kinesin light ch 99.3 3.8E-12 1.3E-16 107.3 8.4 111 134-246 99-274 (283)
128 1elr_A TPR2A-domain of HOP; HO 99.3 6.7E-12 2.3E-16 94.2 8.9 94 152-247 2-102 (131)
129 4g1t_A Interferon-induced prot 99.3 2.6E-11 8.9E-16 111.7 14.6 111 134-245 65-196 (472)
130 1a17_A Serine/threonine protei 99.3 1.4E-11 4.7E-16 97.0 10.9 92 154-247 13-104 (166)
131 2xev_A YBGF; tetratricopeptide 99.3 5.9E-12 2E-16 96.0 8.5 92 155-248 3-100 (129)
132 2gw1_A Mitochondrial precursor 99.3 8.1E-12 2.8E-16 115.1 10.4 112 134-246 352-471 (514)
133 2c2l_A CHIP, carboxy terminus 99.3 1.7E-11 5.7E-16 108.8 11.9 94 151-246 1-94 (281)
134 2gw1_A Mitochondrial precursor 99.3 4.4E-12 1.5E-16 116.9 7.1 110 134-245 284-393 (514)
135 1ouv_A Conserved hypothetical 99.2 1.4E-10 4.9E-15 99.9 14.8 104 134-244 20-134 (273)
136 2qfc_A PLCR protein; TPR, HTH, 99.2 9.2E-11 3.1E-15 103.4 13.3 108 134-243 129-255 (293)
137 3nf1_A KLC 1, kinesin light ch 99.2 1.1E-11 3.9E-16 106.3 7.0 111 134-246 83-217 (311)
138 3ro3_A PINS homolog, G-protein 99.2 2E-11 6.8E-16 94.0 7.5 111 134-246 23-151 (164)
139 3nf1_A KLC 1, kinesin light ch 99.2 1.4E-11 4.7E-16 105.8 7.2 112 134-247 125-301 (311)
140 3k9i_A BH0479 protein; putativ 99.2 4.7E-12 1.6E-16 97.0 3.3 78 168-246 3-83 (117)
141 2ooe_A Cleavage stimulation fa 99.2 4.6E-11 1.6E-15 113.8 10.3 113 137-250 255-382 (530)
142 4a1s_A PINS, partner of inscut 99.2 2.5E-11 8.4E-16 109.6 7.9 104 134-239 62-181 (411)
143 3qou_A Protein YBBN; thioredox 99.2 1.1E-10 3.8E-15 103.6 12.0 97 148-246 111-241 (287)
144 2ooe_A Cleavage stimulation fa 99.2 4.2E-11 1.4E-15 114.1 9.8 115 134-249 335-450 (530)
145 1ouv_A Conserved hypothetical 99.2 4.5E-10 1.5E-14 96.8 15.1 106 133-245 55-171 (273)
146 3u3w_A Transcriptional activat 99.2 3.7E-11 1.3E-15 105.9 8.3 110 134-245 129-258 (293)
147 2kc7_A BFR218_protein; tetratr 99.2 3.1E-11 1.1E-15 88.8 6.6 67 159-227 5-72 (99)
148 3ulq_A Response regulator aspa 99.2 4.4E-11 1.5E-15 108.5 8.6 111 134-246 157-286 (383)
149 3rjv_A Putative SEL1 repeat pr 99.1 1.9E-10 6.5E-15 97.5 10.3 111 132-245 65-189 (212)
150 3gw4_A Uncharacterized protein 99.1 5.1E-11 1.8E-15 96.9 6.4 110 134-245 40-168 (203)
151 2ifu_A Gamma-SNAP; membrane fu 99.1 4.9E-11 1.7E-15 106.4 6.4 113 134-249 90-220 (307)
152 3ulq_A Response regulator aspa 99.1 4.9E-11 1.7E-15 108.2 6.4 111 134-246 117-246 (383)
153 2l6j_A TPR repeat-containing p 99.1 3.3E-11 1.1E-15 89.2 4.3 80 134-215 18-103 (111)
154 2qfc_A PLCR protein; TPR, HTH, 99.1 9E-10 3.1E-14 97.0 14.3 111 134-246 89-218 (293)
155 3sf4_A G-protein-signaling mod 99.1 7.4E-11 2.5E-15 105.1 7.2 110 134-245 201-328 (406)
156 3ro2_A PINS homolog, G-protein 99.1 9.3E-11 3.2E-15 100.5 7.4 104 134-239 19-138 (338)
157 1dce_A Protein (RAB geranylger 99.1 7.4E-10 2.5E-14 109.0 14.1 108 136-245 45-165 (567)
158 3rjv_A Putative SEL1 repeat pr 99.1 1.6E-10 5.5E-15 98.0 8.1 107 134-246 32-151 (212)
159 2ifu_A Gamma-SNAP; membrane fu 99.1 9.7E-11 3.3E-15 104.4 7.0 110 134-246 50-177 (307)
160 3sf4_A G-protein-signaling mod 99.1 1.6E-10 5.4E-15 102.9 8.3 104 134-239 23-142 (406)
161 2if4_A ATFKBP42; FKBP-like, al 99.1 1.9E-11 6.6E-16 111.7 2.1 106 142-249 167-289 (338)
162 3gw4_A Uncharacterized protein 99.1 2.5E-10 8.7E-15 92.7 8.5 110 134-246 6-129 (203)
163 2kat_A Uncharacterized protein 99.1 4E-10 1.4E-14 85.3 8.7 74 172-246 2-75 (115)
164 2kc7_A BFR218_protein; tetratr 99.1 1.5E-09 5.3E-14 79.5 11.4 81 134-224 14-95 (99)
165 3dra_A Protein farnesyltransfe 99.1 2E-09 6.9E-14 98.6 14.1 110 135-245 48-167 (306)
166 3ro2_A PINS homolog, G-protein 99.1 1.4E-10 4.7E-15 99.4 5.9 111 134-246 197-325 (338)
167 1dce_A Protein (RAB geranylger 99.1 5.6E-10 1.9E-14 109.9 10.9 107 135-242 124-244 (567)
168 1ihg_A Cyclophilin 40; ppiase 99.1 2.2E-10 7.6E-15 106.5 7.6 92 154-247 223-330 (370)
169 1na3_A Designed protein CTPR2; 99.0 2E-09 6.9E-14 76.8 10.8 67 134-201 23-89 (91)
170 4a1s_A PINS, partner of inscut 99.0 1.5E-10 5.2E-15 104.4 5.9 110 134-245 237-364 (411)
171 3q15_A PSP28, response regulat 99.0 3.2E-10 1.1E-14 103.1 7.7 111 134-246 155-283 (378)
172 1zu2_A Mitochondrial import re 99.0 1.4E-10 4.7E-15 97.5 4.7 77 168-245 15-112 (158)
173 3bee_A Putative YFRE protein; 99.0 9.5E-10 3.3E-14 83.6 8.9 74 150-225 2-78 (93)
174 1wao_1 Serine/threonine protei 99.0 3.8E-11 1.3E-15 115.1 1.3 92 154-247 6-97 (477)
175 3u3w_A Transcriptional activat 99.0 6.6E-10 2.3E-14 97.8 8.6 111 134-246 89-218 (293)
176 3dra_A Protein farnesyltransfe 99.0 4.3E-09 1.5E-13 96.4 14.1 109 134-244 124-240 (306)
177 1klx_A Cysteine rich protein B 99.0 2.3E-09 8E-14 85.6 9.8 105 132-245 7-118 (138)
178 1pc2_A Mitochondria fission pr 99.0 6E-09 2.1E-13 86.9 11.8 97 134-232 12-113 (152)
179 1hz4_A MALT regulatory protein 98.9 1.7E-09 6E-14 97.0 8.9 111 134-246 28-157 (373)
180 1hz4_A MALT regulatory protein 98.9 2.4E-09 8.1E-14 96.1 9.5 111 134-246 67-196 (373)
181 3q15_A PSP28, response regulat 98.9 6.6E-10 2.3E-14 100.9 5.9 111 134-246 115-244 (378)
182 3q7a_A Farnesyltransferase alp 98.9 5.1E-09 1.7E-13 98.0 12.0 106 135-241 69-176 (349)
183 4f3v_A ESX-1 secretion system 98.9 7.8E-10 2.7E-14 100.8 4.4 110 134-246 116-230 (282)
184 1klx_A Cysteine rich protein B 98.9 3.8E-08 1.3E-12 78.5 13.5 93 134-232 39-137 (138)
185 3u64_A Protein TP_0956; tetrat 98.9 4.8E-09 1.6E-13 96.2 9.2 90 133-222 176-272 (301)
186 3dss_A Geranylgeranyl transfer 98.9 2.1E-08 7.2E-13 93.1 13.4 102 136-239 90-194 (331)
187 3e4b_A ALGK; tetratricopeptide 98.9 8.3E-09 2.8E-13 97.6 10.5 93 134-236 231-330 (452)
188 3dss_A Geranylgeranyl transfer 98.9 2.1E-08 7.2E-13 93.1 12.6 108 136-245 46-166 (331)
189 3n71_A Histone lysine methyltr 98.8 9E-09 3.1E-13 100.0 9.6 109 134-244 323-455 (490)
190 3e4b_A ALGK; tetratricopeptide 98.8 1.2E-08 4E-13 96.5 10.1 107 134-246 193-309 (452)
191 2xm6_A Protein corresponding t 98.8 4.9E-08 1.7E-12 91.9 14.0 103 134-244 273-387 (490)
192 3ma5_A Tetratricopeptide repea 98.8 7.4E-09 2.5E-13 77.6 6.7 62 184-246 2-63 (100)
193 2xm6_A Protein corresponding t 98.8 6.8E-08 2.3E-12 91.0 14.8 107 133-245 92-208 (490)
194 3ly7_A Transcriptional activat 98.8 1.8E-08 6.2E-13 95.0 9.8 120 132-253 211-339 (372)
195 3ro3_A PINS homolog, G-protein 98.8 1.2E-08 4.1E-13 78.2 6.8 91 154-246 9-111 (164)
196 3q7a_A Farnesyltransferase alp 98.8 2.4E-08 8.1E-13 93.5 9.9 104 135-239 104-216 (349)
197 2v5f_A Prolyl 4-hydroxylase su 98.7 1.3E-07 4.4E-12 72.0 11.9 80 154-235 5-91 (104)
198 3qww_A SET and MYND domain-con 98.7 2.3E-08 7.8E-13 95.7 9.1 93 134-228 312-425 (433)
199 4f3v_A ESX-1 secretion system 98.6 8.5E-08 2.9E-12 87.3 9.5 95 134-231 149-248 (282)
200 3u64_A Protein TP_0956; tetrat 98.6 9.3E-08 3.2E-12 87.7 8.4 97 150-246 148-262 (301)
201 3qwp_A SET and MYND domain-con 98.5 3.9E-07 1.4E-11 86.8 10.3 101 134-236 301-425 (429)
202 3bee_A Putative YFRE protein; 98.3 7.5E-07 2.6E-11 67.4 6.4 62 185-247 2-66 (93)
203 4e6h_A MRNA 3'-END-processing 98.3 2.5E-06 8.4E-11 86.0 10.5 112 136-249 325-459 (679)
204 2v5f_A Prolyl 4-hydroxylase su 98.3 4.7E-06 1.6E-10 63.2 9.5 63 134-197 19-88 (104)
205 3ly7_A Transcriptional activat 98.2 5.8E-06 2E-10 78.0 11.3 77 146-225 269-345 (372)
206 1nzn_A CGI-135 protein, fissio 98.2 1E-05 3.4E-10 65.4 11.1 96 134-230 15-114 (126)
207 4b4t_Q 26S proteasome regulato 98.2 1.2E-06 4.2E-11 79.4 6.3 110 134-245 18-156 (434)
208 3qww_A SET and MYND domain-con 98.2 1.1E-06 3.8E-11 84.0 6.0 77 168-245 311-403 (433)
209 4e6h_A MRNA 3'-END-processing 98.2 2.1E-06 7.2E-11 86.5 7.1 122 134-256 448-573 (679)
210 3mv2_B Coatomer subunit epsilo 98.2 6E-06 2.1E-10 76.0 9.2 106 134-245 114-232 (310)
211 3mv2_B Coatomer subunit epsilo 98.2 3.9E-06 1.3E-10 77.3 7.9 115 139-255 85-209 (310)
212 3n71_A Histone lysine methyltr 98.1 3.5E-06 1.2E-10 81.7 7.8 78 167-245 321-414 (490)
213 4b4t_Q 26S proteasome regulato 98.1 7.5E-06 2.6E-10 74.2 8.5 111 133-245 108-237 (434)
214 1xi4_A Clathrin heavy chain; a 97.9 2.7E-05 9.1E-10 84.1 10.4 84 151-242 1102-1185(1630)
215 3qwp_A SET and MYND domain-con 97.9 1.3E-05 4.5E-10 76.2 7.0 78 167-245 299-392 (429)
216 2uy1_A Cleavage stimulation fa 97.8 9.2E-05 3.1E-09 71.3 10.3 110 136-249 195-345 (493)
217 1pc2_A Mitochondria fission pr 97.8 4E-05 1.4E-09 63.7 6.3 76 170-246 13-93 (152)
218 2uy1_A Cleavage stimulation fa 97.7 0.0003 1E-08 67.6 12.9 111 134-247 227-377 (493)
219 1xi4_A Clathrin heavy chain; a 97.7 8.6E-05 2.9E-09 80.3 9.8 93 134-245 1063-1155(1630)
220 1y8m_A FIS1; mitochondria, unk 97.6 0.00029 9.9E-09 58.0 8.9 95 134-230 20-117 (144)
221 4h7y_A Dual specificity protei 97.6 0.00089 3E-08 55.9 11.7 101 136-240 35-143 (161)
222 4h7y_A Dual specificity protei 97.5 0.00027 9.2E-09 59.0 7.9 97 147-246 6-116 (161)
223 3o48_A Mitochondria fission 1 97.5 0.00034 1.1E-08 57.0 7.9 95 134-230 21-118 (134)
224 1b89_A Protein (clathrin heavy 97.4 8.7E-05 3E-09 71.5 4.3 78 167-244 219-302 (449)
225 1b89_A Protein (clathrin heavy 97.3 0.00053 1.8E-08 66.0 8.5 92 132-237 134-254 (449)
226 1ya0_A SMG-7 transcript varian 96.8 0.0056 1.9E-07 59.5 10.3 80 156-237 154-233 (497)
227 3ffl_A Anaphase-promoting comp 96.7 0.0062 2.1E-07 51.2 8.8 97 134-233 34-164 (167)
228 3ffl_A Anaphase-promoting comp 96.7 0.0045 1.5E-07 52.1 7.6 79 167-246 32-144 (167)
229 1zbp_A Hypothetical protein VP 96.6 0.025 8.4E-07 51.1 12.1 62 134-196 11-72 (273)
230 4g26_A Pentatricopeptide repea 96.6 0.034 1.2E-06 53.5 13.9 111 134-247 84-198 (501)
231 1nzn_A CGI-135 protein, fissio 96.5 0.0038 1.3E-07 50.2 5.4 67 129-196 47-115 (126)
232 4gns_B Protein CSD3, chitin bi 96.3 0.017 5.8E-07 58.9 10.1 109 135-244 264-391 (754)
233 4g26_A Pentatricopeptide repea 96.0 0.076 2.6E-06 51.0 12.7 115 134-250 40-166 (501)
234 1y8m_A FIS1; mitochondria, unk 95.7 0.045 1.5E-06 44.9 8.3 65 131-196 53-118 (144)
235 3o48_A Mitochondria fission 1 95.7 0.034 1.2E-06 45.1 7.5 65 131-196 54-119 (134)
236 2ff4_A Probable regulatory pro 95.1 0.22 7.5E-06 46.2 12.1 83 134-218 129-233 (388)
237 4gns_B Protein CSD3, chitin bi 94.7 0.1 3.5E-06 53.2 9.2 59 156-216 339-397 (754)
238 1ya0_A SMG-7 transcript varian 94.6 0.099 3.4E-06 50.7 8.6 66 134-200 166-231 (497)
239 1zbp_A Hypothetical protein VP 94.5 0.17 5.9E-06 45.6 9.4 63 167-230 9-71 (273)
240 3mkq_A Coatomer beta'-subunit; 94.5 0.13 4.5E-06 50.0 9.3 95 150-245 677-804 (814)
241 2ff4_A Probable regulatory pro 92.3 0.38 1.3E-05 44.5 8.2 51 195-246 177-227 (388)
242 3mkq_A Coatomer beta'-subunit; 92.0 1 3.4E-05 43.8 11.0 43 168-216 665-707 (814)
243 4fhn_B Nucleoporin NUP120; pro 89.5 2.3 7.8E-05 44.8 11.6 98 145-244 833-958 (1139)
244 3mkq_B Coatomer subunit alpha; 88.3 5.1 0.00017 33.6 10.8 42 134-181 19-60 (177)
245 2br9_A 14-3-3E, 14-3-3 protein 86.4 1.6 5.3E-05 38.4 6.8 47 137-183 147-201 (234)
246 3iqu_A 14-3-3 protein sigma; s 86.2 1.6 5.4E-05 38.4 6.8 48 136-183 149-204 (236)
247 2npm_A 14-3-3 domain containin 85.8 1.7 5.8E-05 38.8 6.8 47 137-183 173-226 (260)
248 3mkq_B Coatomer subunit alpha; 85.5 3.6 0.00012 34.5 8.4 55 152-216 6-60 (177)
249 3uzd_A 14-3-3 protein gamma; s 85.5 1.8 6.2E-05 38.3 6.8 24 158-181 177-200 (248)
250 2npm_A 14-3-3 domain containin 85.4 4.5 0.00015 36.0 9.4 48 172-219 173-227 (260)
251 1o9d_A 14-3-3-like protein C; 85.1 1.9 6.5E-05 38.4 6.8 46 137-182 152-205 (260)
252 3iqu_A 14-3-3 protein sigma; s 84.9 4.2 0.00014 35.7 8.9 48 171-218 149-204 (236)
253 1o9d_A 14-3-3-like protein C; 84.7 5.1 0.00017 35.6 9.4 48 172-219 152-207 (260)
254 2o8p_A 14-3-3 domain containin 84.6 4.6 0.00016 35.3 8.9 48 136-183 141-196 (227)
255 3ubw_A 14-3-3E, 14-3-3 protein 84.1 2.3 7.7E-05 38.0 6.8 46 137-182 173-226 (261)
256 3ubw_A 14-3-3E, 14-3-3 protein 83.9 5.8 0.0002 35.3 9.4 47 172-218 173-227 (261)
257 3kae_A CDC27, possible protein 83.7 16 0.00054 31.3 11.5 60 167-227 74-151 (242)
258 3efz_A 14-3-3 protein; 14-3-3, 81.3 2 6.8E-05 38.5 5.4 47 137-183 169-225 (268)
259 4b4t_R RPN7, 26S proteasome re 80.6 0.99 3.4E-05 42.3 3.3 110 134-245 108-229 (429)
260 1qsa_A Protein (soluble lytic 79.8 8.3 0.00028 38.2 9.8 79 137-218 269-347 (618)
261 2br9_A 14-3-3E, 14-3-3 protein 79.1 5.2 0.00018 35.0 7.2 47 172-218 147-201 (234)
262 3uzd_A 14-3-3 protein gamma; s 76.6 6.7 0.00023 34.6 7.2 47 172-218 148-202 (248)
263 2o8p_A 14-3-3 domain containin 75.4 21 0.00073 31.0 10.0 52 168-219 138-197 (227)
264 1qsa_A Protein (soluble lytic 74.6 17 0.00059 35.8 10.5 109 135-245 229-340 (618)
265 2v6y_A AAA family ATPase, P60 74.3 5.9 0.0002 28.8 5.3 32 136-183 8-39 (83)
266 2w2u_A Hypothetical P60 katani 73.6 6.3 0.00022 28.8 5.3 32 136-183 16-47 (83)
267 3kae_A CDC27, possible protein 73.1 24 0.00084 30.1 9.5 89 151-246 30-136 (242)
268 2w2u_A Hypothetical P60 katani 72.8 6.5 0.00022 28.7 5.2 44 171-223 16-59 (83)
269 2v6y_A AAA family ATPase, P60 72.7 6.6 0.00022 28.6 5.2 44 172-224 9-52 (83)
270 4b4t_S RPN3, 26S proteasome re 70.4 5.6 0.00019 38.8 5.6 55 167-224 243-304 (523)
271 3txn_A 26S proteasome regulato 69.8 23 0.0008 33.0 9.6 109 136-246 75-203 (394)
272 3efz_A 14-3-3 protein; 14-3-3, 68.7 7.7 0.00026 34.7 5.7 49 171-219 168-226 (268)
273 3re2_A Predicted protein; meni 68.6 16 0.00056 34.4 8.0 66 152-219 253-325 (472)
274 4b4t_R RPN7, 26S proteasome re 67.9 23 0.00078 32.8 9.2 86 134-221 145-239 (429)
275 4gq2_M Nucleoporin NUP120; bet 66.3 47 0.0016 34.2 11.9 81 144-226 830-934 (950)
276 4b4t_P 26S proteasome regulato 66.2 85 0.0029 29.2 12.9 85 134-219 151-247 (445)
277 1wfd_A Hypothetical protein 15 65.3 15 0.00052 27.1 6.0 16 134-149 10-25 (93)
278 3esl_A Checkpoint serine/threo 64.3 23 0.00077 30.3 7.6 93 141-236 58-162 (202)
279 3spa_A Mtrpol, DNA-directed RN 63.9 84 0.0029 33.4 13.1 84 134-221 141-232 (1134)
280 1wfd_A Hypothetical protein 15 63.4 13 0.00044 27.6 5.2 16 168-183 28-43 (93)
281 3txn_A 26S proteasome regulato 63.1 23 0.0008 33.0 8.2 84 134-218 113-209 (394)
282 4a5x_A MITD1, MIT domain-conta 63.0 12 0.0004 27.5 4.9 18 166-183 27-44 (86)
283 2cpt_A SKD1 protein, vacuolar 62.6 11 0.00038 29.3 5.0 34 135-184 14-47 (117)
284 2cpt_A SKD1 protein, vacuolar 62.6 49 0.0017 25.5 8.7 46 171-225 15-60 (117)
285 3u84_A Menin; MLL, JUND, ledgf 62.4 24 0.00081 33.9 7.9 65 152-219 275-347 (550)
286 3spa_A Mtrpol, DNA-directed RN 61.9 43 0.0015 35.6 10.5 80 162-245 135-222 (1134)
287 2v6x_A Vacuolar protein sortin 61.5 16 0.00053 26.4 5.3 34 134-183 8-41 (85)
288 4gq4_A Menin; tumor suppressor 59.8 29 0.00098 33.2 8.0 66 152-219 260-332 (489)
289 2v6x_A Vacuolar protein sortin 59.1 18 0.0006 26.1 5.2 44 171-223 10-53 (85)
290 4a5x_A MITD1, MIT domain-conta 57.2 18 0.0006 26.5 5.0 45 135-188 12-56 (86)
291 1wy6_A Hypothetical protein ST 54.8 79 0.0027 26.0 8.9 53 167-220 103-155 (172)
292 4aez_C MAD3, mitotic spindle c 54.3 36 0.0012 29.4 7.3 87 142-236 99-197 (223)
293 4b4t_P 26S proteasome regulato 53.6 1.1E+02 0.0038 28.3 11.2 87 157-245 140-239 (445)
294 4b4t_S RPN3, 26S proteasome re 51.5 14 0.00048 36.0 4.6 112 134-249 150-295 (523)
295 3t5x_A PCI domain-containing p 49.5 39 0.0013 28.2 6.7 34 156-190 16-49 (203)
296 2cfu_A SDSA1; SDS-hydrolase, l 46.7 36 0.0012 33.7 6.8 47 196-243 456-502 (658)
297 2wpv_A GET4, UPF0363 protein Y 44.8 1.3E+02 0.0045 27.0 9.8 25 222-246 132-156 (312)
298 2wvi_A Mitotic checkpoint seri 44.7 86 0.0029 25.6 7.8 76 142-225 45-131 (164)
299 2cfu_A SDSA1; SDS-hydrolase, l 42.1 1.2E+02 0.004 30.0 9.7 35 167-201 461-495 (658)
300 2ijq_A Hypothetical protein; s 40.9 1.3E+02 0.0043 24.6 8.2 53 167-219 44-104 (161)
301 2crb_A Nuclear receptor bindin 40.4 45 0.0015 25.2 4.9 14 168-181 28-41 (97)
302 3ax2_A Mitochondrial import re 39.5 1E+02 0.0034 21.9 7.2 30 196-226 24-53 (73)
303 2czy_A Paired amphipathic heli 39.4 96 0.0033 22.0 6.5 57 171-227 4-60 (77)
304 2wpv_A GET4, UPF0363 protein Y 39.0 59 0.002 29.3 6.5 65 152-217 132-215 (312)
305 3lpz_A GET4 (YOR164C homolog); 39.0 1.9E+02 0.0065 26.3 9.9 82 136-218 118-215 (336)
306 2dl1_A Spartin; SPG20, MIT, st 37.4 19 0.00065 28.2 2.5 15 171-185 19-33 (116)
307 4a1g_A Mitotic checkpoint seri 37.3 1.1E+02 0.0036 24.8 7.1 78 141-226 49-137 (152)
308 4fhn_B Nucleoporin NUP120; pro 34.5 1.2E+02 0.0042 31.6 8.9 106 134-242 856-989 (1139)
309 2ca5_A MXIH; transport protein 33.5 32 0.0011 25.4 3.0 28 170-197 25-52 (85)
310 3esl_A Checkpoint serine/threo 33.1 1.5E+02 0.0053 25.0 7.8 51 136-187 95-147 (202)
311 3t5x_A PCI domain-containing p 32.8 1E+02 0.0035 25.6 6.6 65 134-207 28-96 (203)
312 1om2_A Protein (mitochondrial 32.2 1.3E+02 0.0043 22.5 6.3 48 132-191 9-56 (95)
313 2cwy_A Hypothetical protein TT 31.8 1.5E+02 0.0052 21.7 6.8 54 162-218 9-67 (94)
314 3mv2_A Coatomer subunit alpha; 30.4 3.1E+02 0.011 24.9 10.6 46 203-249 220-266 (325)
315 1wy6_A Hypothetical protein ST 29.5 1.4E+02 0.0049 24.4 6.6 50 134-184 105-154 (172)
316 2dl1_A Spartin; SPG20, MIT, st 29.2 91 0.0031 24.3 5.2 16 168-183 35-50 (116)
317 4a1g_A Mitotic checkpoint seri 28.9 78 0.0027 25.6 5.0 51 139-190 84-136 (152)
318 2wvi_A Mitotic checkpoint seri 28.0 81 0.0028 25.8 5.0 50 139-189 79-130 (164)
319 3t5v_B Nuclear mRNA export pro 27.2 1.6E+02 0.0054 27.9 7.5 88 134-223 140-254 (455)
320 2cr7_A Paired amphipathic heli 26.1 65 0.0022 23.1 3.6 59 134-192 8-66 (80)
321 2wb7_A PT26-6P; extra chromoso 25.3 4.1E+02 0.014 25.7 9.9 43 171-219 455-497 (526)
322 4aez_C MAD3, mitotic spindle c 24.5 95 0.0033 26.7 5.0 49 138-187 132-182 (223)
323 3ax2_A Mitochondrial import re 23.8 2E+02 0.0067 20.4 7.2 33 160-193 23-55 (73)
324 3u84_A Menin; MLL, JUND, ledgf 23.7 2.5E+02 0.0084 27.0 7.9 57 139-196 298-365 (550)
325 3lew_A SUSD-like carbohydrate 22.9 2.2E+02 0.0074 26.7 7.7 27 156-183 205-231 (495)
326 2ca5_A MXIH; transport protein 22.5 57 0.0019 24.1 2.7 30 205-234 25-54 (85)
327 3lew_A SUSD-like carbohydrate 22.4 2.2E+02 0.0075 26.6 7.6 48 172-220 175-233 (495)
328 1om2_A Protein (mitochondrial 22.0 2.5E+02 0.0085 20.9 6.7 46 170-227 12-57 (95)
329 2ymb_A MITD1, MIT domain-conta 22.0 19 0.00065 31.9 0.0 17 134-150 18-34 (257)
330 4gq4_A Menin; tumor suppressor 21.6 5E+02 0.017 24.8 9.6 60 138-198 282-352 (489)
331 2cr7_A Paired amphipathic heli 21.2 1.5E+02 0.005 21.1 4.7 63 171-233 10-72 (80)
332 3re2_A Predicted protein; meni 20.9 1.7E+02 0.0059 27.5 6.2 57 139-196 276-343 (472)
333 3rau_A Tyrosine-protein phosph 20.5 1.5E+02 0.0051 26.9 5.8 26 192-218 255-280 (363)
334 3kez_A Putative sugar binding 20.3 2.6E+02 0.0089 25.8 7.6 47 136-183 170-224 (461)
335 4gq2_M Nucleoporin NUP120; bet 20.2 83 0.0028 32.4 4.3 46 167-217 822-867 (950)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.77 E-value=1.1e-17 Score=132.29 Aligned_cols=99 Identities=17% Similarity=0.191 Sum_probs=93.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|++||+++|+++.+|+++|.++. ..|++++|+.+|++||+++|+++.+|+++|.++.. .|++++|+.+|
T Consensus 27 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~~A~~~~ 104 (126)
T 4gco_A 27 GDYPTAMRHYNEAVKRDPENAILYSNRAACLT-KLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA-MREWSKAQRAY 104 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHH-hhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 68999999999999999999999999999886 58999999999999999999999999999999876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHH
Q 024536 214 DRAVHSAPDDCHVLASYARFL 234 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll 234 (266)
++|++++|++..++..++.++
T Consensus 105 ~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 105 EDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999988764
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.75 E-value=2.4e-18 Score=139.40 Aligned_cols=112 Identities=14% Similarity=0.139 Sum_probs=103.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 024536 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (266)
Q Consensus 133 ~~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~ 212 (266)
.+++++|++.|++++..+|+++.+++++|.+++ ..|++++|+.+|++||+++|+++.+|.++|.++.. .|++++|+.+
T Consensus 10 ~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~~A~~~ 87 (150)
T 4ga2_A 10 KADVERYIASVQGSTPSPRQKSIKGFYFAKLYY-EAKEYDLAKKYICTYINVQERDPKAHRFLGLLYEL-EENTDKAVEC 87 (150)
T ss_dssp HHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cChHHHHHHHHHHhcccCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCchHHHHHH
Confidence 368999999999999999999999999999876 58999999999999999999999999999998876 8999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
|++|++++|+++.++.++|.++...+++++|.+.
T Consensus 88 ~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~ 121 (150)
T 4ga2_A 88 YRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKY 121 (150)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHH
Confidence 9999999999999999999999999999887643
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.73 E-value=5.6e-17 Score=131.31 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=96.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHH-H
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS-Y 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~-~ 212 (266)
+++++|+.+|+++|+++|+++.+|+++|.++. ..|++++|+.+|++||+++|+++.++.++|.++.. .+++++|.. +
T Consensus 45 ~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~aa~~~ 122 (150)
T 4ga2_A 45 KEYDLAKKYICTYINVQERDPKAHRFLGLLYE-LEENTDKAVECYRRSVELNPTQKDLVLKIAELLCK-NDVTDGRAKYW 122 (150)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HCSSSSHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCChHHHHHHH
Confidence 68999999999999999999999999999886 68999999999999999999999999999999877 678876655 5
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGEE 240 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~~ 240 (266)
+++|++++|+++.++...+.++...|+.
T Consensus 123 ~~~al~l~P~~~~~~~l~~~ll~~~G~d 150 (150)
T 4ga2_A 123 VERAAKLFPGSPAVYKLKEQLLDCEGED 150 (150)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHhCcC
Confidence 6999999999999999999998888763
No 4
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.72 E-value=3.7e-17 Score=139.37 Aligned_cols=110 Identities=14% Similarity=0.031 Sum_probs=81.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc----------
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH---------- 203 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~---------- 203 (266)
+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .
T Consensus 19 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~~~~~~~~~~~ 96 (217)
T 2pl2_A 19 GRYDAALTLFERALKENPQDPEALYWLARTQL-KLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA-LYRQAEDRERG 96 (217)
T ss_dssp TCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHTCSSHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-hhhhhhhhccc
Confidence 56777777777777777777777777777665 46777777777777777777777777777776655 5
Q ss_pred -CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 204 -KDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 204 -gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
|++++|+.+|++|++++|+++.++..+|.++...|++++|++
T Consensus 97 ~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~ 139 (217)
T 2pl2_A 97 KGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEA 139 (217)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHH
Confidence 677777777777777777777777777777777777777764
No 5
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.72 E-value=5.7e-17 Score=138.17 Aligned_cols=113 Identities=18% Similarity=0.160 Sum_probs=96.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.+|.++|.++. ..|++++|+.+|++|++++ +++.++.++|.++.. .|++++|+.+|
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~-~g~~~~A~~~~ 174 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQRGLVYA-LLGERDKAEASLKQALALE-DTPEIRSALAELYLS-MGRLDEALAQY 174 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 58899999999999999999999999999886 6899999999999999999 999999999999877 79999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDDQ 249 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~~ 249 (266)
+++++++|+++.++.++|.++...|++++|++.-+.
T Consensus 175 ~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~ 210 (217)
T 2pl2_A 175 AKALEQAPKDLDLRVRYASALLLKGKAEEAARAAAL 210 (217)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHTC-------------
T ss_pred HHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 999999999999999999999999999999976443
No 6
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.71 E-value=7.1e-17 Score=163.61 Aligned_cols=109 Identities=21% Similarity=0.239 Sum_probs=62.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+++|++||+++|+++.+|+|+|.++. ..|++++|+.+|++||+++|+++.+|+++|.++.. .|++++|+.+|
T Consensus 23 G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~-~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~-~g~~~~A~~~~ 100 (723)
T 4gyw_A 23 GNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE-MQDVQGALQCY 100 (723)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 45555555666666666655555555555554 35555555555555555555555555555555544 45555555555
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~ 244 (266)
++|++++|+++.++.++|.++..+|++++|+
T Consensus 101 ~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi 131 (723)
T 4gyw_A 101 TRAIQINPAFADAHSNLASIHKDSGNIPEAI 131 (723)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 5555555555555555555555555555555
No 7
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.71 E-value=4.5e-18 Score=140.29 Aligned_cols=106 Identities=8% Similarity=-0.011 Sum_probs=92.3
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 140 DVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 140 ~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l 219 (266)
...|+++++++|+++.+++++|..++ ..|++++|+.+|++|+.++|+++.+|.++|.++.. .|++++|+.+|++|+++
T Consensus 22 ~~~l~~al~l~p~~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~-~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 22 GATLKDINAIPDDMMDDIYSYAYDFY-NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI-KEQFQQAADLYAVAFAL 99 (151)
T ss_dssp SCCTGGGCCSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHhCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HccHHHHHHHHHHHHhh
Confidence 34677888889999999999998876 58999999999999999999999999999988866 78999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 220 APDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 220 ~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
+|+++.+++++|.+|...|++++|++..
T Consensus 100 ~P~~~~~~~~lg~~~~~lg~~~eA~~~~ 127 (151)
T 3gyz_A 100 GKNDYTPVFHTGQCQLRLKAPLKAKECF 127 (151)
T ss_dssp SSSCCHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999988543
No 8
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.69 E-value=3e-16 Score=159.00 Aligned_cols=110 Identities=22% Similarity=0.166 Sum_probs=106.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+++|++||+++|+++.+|+|+|.++. ..|++++|+++|++||+++|+++.+|+++|.++.. .|++++|+.+|
T Consensus 57 g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~-~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~-~g~~~eAi~~~ 134 (723)
T 4gyw_A 57 GKLQEALMHYKEAIRISPTFADAYSNMGNTLK-EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD-SGNIPEAIASY 134 (723)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999999886 58999999999999999999999999999999876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
++|++++|+++.++.++|.++..++++++|++
T Consensus 135 ~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~ 166 (723)
T 4gyw_A 135 RTALKLKPDFPDAYCNLAHCLQIVCDWTDYDE 166 (723)
T ss_dssp HHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHH
T ss_pred HHHHHhCCCChHHHhhhhhHHHhcccHHHHHH
Confidence 99999999999999999999999999999984
No 9
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.68 E-value=1.6e-16 Score=134.50 Aligned_cols=106 Identities=11% Similarity=0.156 Sum_probs=99.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHH----------------HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLAN----------------YAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~n----------------lA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ 197 (266)
+++++|+.+|+++++++|+++.+|++ +|.++. ..|++++|+.+|++||+++|+++.++.++|.
T Consensus 18 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 96 (208)
T 3urz_A 18 GQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYK-KNRNYDKAYLFYKELLQKAPNNVDCLEACAE 96 (208)
T ss_dssp TCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 68999999999999999999999999 999876 6899999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcc
Q 024536 198 LIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEE 241 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~ 241 (266)
++.. .|++++|+.+|+++++++|+++.++.++|.+++..++.+
T Consensus 97 ~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 97 MQVC-RGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 9877 799999999999999999999999999999988776543
No 10
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.67 E-value=6.6e-17 Score=131.00 Aligned_cols=103 Identities=11% Similarity=-0.036 Sum_probs=77.5
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 024536 141 VYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSA 220 (266)
Q Consensus 141 ~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~ 220 (266)
..|+++++++|+++.+++++|.++. ..|++++|+.+|++++.++|+++.+|+++|.++.. .|++++|+.+|++|+.++
T Consensus 8 ~~~~~al~~~p~~~~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 8 GTIAMLNEISSDTLEQLYSLAFNQY-QSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQA-MGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp CSHHHHTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS
T ss_pred hhHHHHHcCCHhhHHHHHHHHHHHH-HcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcC
Confidence 4677777777777777777777665 46777777777777777777777777777777655 677777777777777777
Q ss_pred CCCHHHHHHHHHHHHHcCCcccccc
Q 024536 221 PDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 221 P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
|+++.++.++|.++...|++++|++
T Consensus 86 p~~~~~~~~lg~~~~~~g~~~~A~~ 110 (148)
T 2vgx_A 86 IXEPRFPFHAAECLLQXGELAEAES 110 (148)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCchHHHHHHHHHHHcCCHHHHHH
Confidence 7777777777777777777777774
No 11
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.67 E-value=1.1e-16 Score=126.56 Aligned_cols=102 Identities=16% Similarity=0.044 Sum_probs=93.8
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 024536 145 EMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDC 224 (266)
Q Consensus 145 rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da 224 (266)
|+..+||+.+.++.+.|..++ ..|++++|+.+|++||+++|+++.+|.++|.++.. .|++++|+.+|++||+++|+++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYF-KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LMEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hccHHHHHHHHHHHHHhhhhhh
Confidence 556689999999999999887 58999999999999999999999999999999877 8999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCccccccccc
Q 024536 225 HVLASYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 225 ~a~~~lA~ll~~~G~~~eA~~~~~ 248 (266)
.++..+|.++..+|++++|++..+
T Consensus 82 ~a~~~lg~~~~~~~~~~~A~~~~~ 105 (126)
T 4gco_A 82 KGYIRKAACLVAMREWSKAQRAYE 105 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHH
Confidence 999999999999999999996543
No 12
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.67 E-value=3.6e-15 Score=112.09 Aligned_cols=106 Identities=20% Similarity=0.262 Sum_probs=100.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..+++++|+.+|++++.++|+++.++..+|.++.. .+++++|+.+|
T Consensus 26 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~ 103 (131)
T 2vyi_A 26 ENFEAAVHFYGKAIELNPANAVYFCNRAAAYS-KLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS-LNKHVEAVAYY 103 (131)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH-hCCHHHHHHHH
Confidence 68999999999999999999999999999886 58999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEE 241 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~ 241 (266)
++++.++|+++.++..++.++...|+++
T Consensus 104 ~~~~~~~p~~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 104 KKALELDPDNETYKSNLKIAELKLREAP 131 (131)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhcCccchHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999988764
No 13
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.67 E-value=1.9e-15 Score=116.55 Aligned_cols=101 Identities=23% Similarity=0.134 Sum_probs=94.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.+|.++|.++. ..|++++|+.+|++|++++|+++.+++++|.++.. .|++++|+.+|
T Consensus 18 ~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~ 95 (126)
T 3upv_A 18 SDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEYASALETL 95 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-HhCHHHHHHHH
Confidence 68999999999999999999999999999886 58999999999999999999999999999999876 89999999999
Q ss_pred HHHHHhC------CCCHHHHHHHHHHHHH
Q 024536 214 DRAVHSA------PDDCHVLASYARFLWD 236 (266)
Q Consensus 214 ekAL~l~------P~da~a~~~lA~ll~~ 236 (266)
+++++++ |++..++..++.+...
T Consensus 96 ~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 96 DAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 9999999 9999999888877654
No 14
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.67 E-value=6.9e-16 Score=124.73 Aligned_cols=100 Identities=18% Similarity=0.140 Sum_probs=91.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.+|+++|.++. ..|++++|+.+|++||+++|+++.+|+++|.++.. .|++++|+.+|
T Consensus 25 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 102 (164)
T 3sz7_A 25 KEYSKAIDLYTQALSIAPANPIYLSNRAAAYS-ASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFD-MADYKGAKEAY 102 (164)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccCHHHHHHHH
Confidence 68999999999999999999999999999886 58999999999999999999999999999999877 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHH
Q 024536 214 DRAVHSAPDDCHVLASYARFLW 235 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~ 235 (266)
+++++++|+++.++...+....
T Consensus 103 ~~al~~~p~~~~~~~~~~l~~~ 124 (164)
T 3sz7_A 103 EKGIEAEGNGGSDAMKRGLETT 124 (164)
T ss_dssp HHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHHHHhCCCchHHHHHHHHHHH
Confidence 9999999999886555554433
No 15
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.66 E-value=1.4e-15 Score=125.26 Aligned_cols=89 Identities=16% Similarity=0.163 Sum_probs=85.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.+|+++|.++. ..|++++|+.+|++|++++|+++.+|+++|.++.. .|++++|+.+|
T Consensus 50 g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~-lg~~~eA~~~~ 127 (151)
T 3gyz_A 50 GRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ-IKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR-LKAPLKAKECF 127 (151)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999999886 68999999999999999999999999999999876 89999999999
Q ss_pred HHHHHhCCCCH
Q 024536 214 DRAVHSAPDDC 224 (266)
Q Consensus 214 ekAL~l~P~da 224 (266)
++|++++|+.+
T Consensus 128 ~~al~l~~~~~ 138 (151)
T 3gyz_A 128 ELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHCCCHH
T ss_pred HHHHHhCCCHH
Confidence 99999999876
No 16
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.66 E-value=5.6e-16 Score=145.58 Aligned_cols=111 Identities=12% Similarity=0.068 Sum_probs=102.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGD-FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd-~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~ 212 (266)
+++++|+++|++||+++|+++.+|+++|.++. ..|+ +++|+.+|++||+++|+++.+|+++|.++.. .|++++|+.+
T Consensus 111 g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~-~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~-~g~~~eAl~~ 188 (382)
T 2h6f_A 111 ERSERAFKLTRDAIELNAANYTVWHFRRVLLK-SLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW-LRDPSQELEF 188 (382)
T ss_dssp CCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCTTHHHH
T ss_pred CChHHHHHHHHHHHHhCccCHHHHHHHHHHHH-HcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-ccCHHHHHHH
Confidence 57899999999999999999999999999886 5785 9999999999999999999999999998876 7899999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
|++||+++|+++.+|.++|.++...|++++|++.
T Consensus 189 ~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~ 222 (382)
T 2h6f_A 189 IADILNQDAKNYHAWQHRQWVIQEFKLWDNELQY 222 (382)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred HHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHH
Confidence 9999999999999999999999999999999854
No 17
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.66 E-value=1.4e-15 Score=123.76 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC----------------------------------CHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG----------------------------------DFVKAEEYCG 179 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~g----------------------------------d~e~A~~~~e 179 (266)
+++++|+.+|++||+++|+++.+|.++|.++. ..| +++.|..+++
T Consensus 19 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 97 (184)
T 3vtx_A 19 GDFDGAIRAYKKVLKADPNNVETLLKLGKTYM-DIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQ 97 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 68899999999999999999999999988764 344 4555555555
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 180 RAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 180 rAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+|+.++|++..++..+|.++.. .|++++|+.+|+++++++|+++.++.++|.++..+|++++|++.
T Consensus 98 ~a~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 163 (184)
T 3vtx_A 98 RAIALNTVYADAYYKLGLVYDS-MGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKY 163 (184)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHhCccchHHHHHHHHHHHH-hCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHH
Confidence 5555666666666666665544 57777777777777777777777777777777777777777754
No 18
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.64 E-value=2.7e-15 Score=126.48 Aligned_cols=113 Identities=14% Similarity=0.096 Sum_probs=106.0
Q ss_pred CCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYP-EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P-~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~ 212 (266)
+++++|+.+|+++++++| .+..+++++|.++. ..|++++|+.+|++|+.++|+++.++.++|.++.. .|++++|+.+
T Consensus 21 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A~~~ 98 (228)
T 4i17_A 21 KNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCAD-NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD-MKNNQEYIAT 98 (228)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH-HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH-cccHHHHHHH
Confidence 689999999999999999 99999999999876 68999999999999999999999999999999876 8999999999
Q ss_pred HHHHHHhCCCCH-------HHHHHHHHHHHHcCCccccccccc
Q 024536 213 FDRAVHSAPDDC-------HVLASYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 213 ~ekAL~l~P~da-------~a~~~lA~ll~~~G~~~eA~~~~~ 248 (266)
|+++++++|+++ .++..+|.++...|++++|++..+
T Consensus 99 ~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~ 141 (228)
T 4i17_A 99 LTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYK 141 (228)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHH
Confidence 999999999999 669999999999999999996543
No 19
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.64 E-value=2.1e-15 Score=114.57 Aligned_cols=104 Identities=19% Similarity=0.159 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..+++++|+.+|++++.++|+++.++.++|.++.. .+++++|+.+|
T Consensus 30 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~ 107 (133)
T 2lni_A 30 GDYPQAMKHYTEAIKRNPKDAKLYSNRAACYT-KLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA-MKDYTKAMDVY 107 (133)
T ss_dssp TCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 68899999999999999999999999999876 58999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCC
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGE 239 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~ 239 (266)
++++.++|++..++..++.++..+++
T Consensus 108 ~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 108 QKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 99999999999999999999988764
No 20
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.64 E-value=3.3e-16 Score=124.46 Aligned_cols=103 Identities=8% Similarity=-0.081 Sum_probs=63.2
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 024536 141 VYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSA 220 (266)
Q Consensus 141 ~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~ 220 (266)
..|+++++++|+++.+++++|..+. ..|++++|+.+|++++.++|+++.+|+++|.++.. .|++++|+.+|++|+.++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQY-QAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQS-LGLYEQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcC
Confidence 3556666666666666666666554 35666666666666666666666666666665544 566666666666666666
Q ss_pred CCCHHHHHHHHHHHHHcCCcccccc
Q 024536 221 PDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 221 P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
|+++.++.++|.++...|++++|++
T Consensus 83 p~~~~~~~~lg~~~~~~g~~~~A~~ 107 (142)
T 2xcb_A 83 INEPRFPFHAAECHLQLGDLDGAES 107 (142)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHH
Confidence 6666666666666666666666653
No 21
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.64 E-value=6.9e-16 Score=125.47 Aligned_cols=114 Identities=11% Similarity=0.146 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH--HHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDA--PRAKS 211 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~--deAi~ 211 (266)
+++++|+.+|+++++.+|+++.+|+.+|.++. ..|++++|+.+|++|+.++|+++.++.++|.+++...+++ ++|+.
T Consensus 24 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~ 102 (177)
T 2e2e_A 24 QNPEAQLQALQDKIRANPQNSEQWALLGEYYL-WQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRA 102 (177)
T ss_dssp ---CCCCHHHHHHHHHCCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHH
Confidence 67899999999999999999999999999886 5899999999999999999999999999999844447898 99999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccccc
Q 024536 212 YFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 212 ~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~ 248 (266)
+|+++++++|+++.++..+|.++...|++++|++.-+
T Consensus 103 ~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 139 (177)
T 2e2e_A 103 MIDKALALDSNEITALMLLASDAFMQANYAQAIELWQ 139 (177)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 9999999999999999999999999999999996543
No 22
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.63 E-value=2.2e-15 Score=122.00 Aligned_cols=93 Identities=9% Similarity=-0.020 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.+|+++|.++. ..|++++|+.+|++|+.++|+++.+++++|.++.. .|++++|+.+|
T Consensus 35 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 112 (148)
T 2vgx_A 35 GXYEDAHXVFQALCVLDHYDSRFFLGLGACRQ-AMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ-XGELAEAESGL 112 (148)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCcccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999999886 68999999999999999999999999999999876 89999999999
Q ss_pred HHHHHhCCCCHHHHH
Q 024536 214 DRAVHSAPDDCHVLA 228 (266)
Q Consensus 214 ekAL~l~P~da~a~~ 228 (266)
++|++++|+++....
T Consensus 113 ~~al~~~p~~~~~~~ 127 (148)
T 2vgx_A 113 FLAQELIANXPEFXE 127 (148)
T ss_dssp HHHHHHHTTCGGGHH
T ss_pred HHHHHHCcCCCcchH
Confidence 999999999876543
No 23
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.63 E-value=7.9e-15 Score=119.33 Aligned_cols=90 Identities=19% Similarity=0.080 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
++++.|+..+.++++++|+++.++..+|.++. ..|++++|+.+|+++++++|+++.++.++|.++.. .|++++|+.+|
T Consensus 87 ~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 164 (184)
T 3vtx_A 87 DEKQAAIDALQRAIALNTVYADAYYKLGLVYD-SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG-KGLRDEAVKYF 164 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH-CCCHHHHHHHH
Confidence 68999999999999999999999999999886 68999999999999999999999999999999876 89999999999
Q ss_pred HHHHHhCCCCHH
Q 024536 214 DRAVHSAPDDCH 225 (266)
Q Consensus 214 ekAL~l~P~da~ 225 (266)
++||+++|+++.
T Consensus 165 ~~al~~~p~~a~ 176 (184)
T 3vtx_A 165 KKALEKEEKKAK 176 (184)
T ss_dssp HHHHHTTHHHHH
T ss_pred HHHHhCCccCHH
Confidence 999999998754
No 24
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.63 E-value=5.3e-15 Score=116.77 Aligned_cols=111 Identities=16% Similarity=0.063 Sum_probs=102.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+.+|++++.++|+++.++.++|.++.. .|++++|+.+|
T Consensus 27 ~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 104 (166)
T 1a17_A 27 KDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAALRDY 104 (166)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-hccHHHHHHHH
Confidence 68999999999999999999999999999876 58999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHH--HHHcCCccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARF--LWDAGEEEDDDDG 246 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~l--l~~~G~~~eA~~~ 246 (266)
++++.++|++..++..++.+ +...|++++|++.
T Consensus 105 ~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~ 139 (166)
T 1a17_A 105 ETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAG 139 (166)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999988555554 8888999999854
No 25
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.63 E-value=8.5e-16 Score=118.23 Aligned_cols=108 Identities=13% Similarity=0.164 Sum_probs=94.1
Q ss_pred CCCHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 024536 133 GKESESMDVYYQEMIKA---YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRA 209 (266)
Q Consensus 133 ~~~~eeA~~~y~rALel---~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deA 209 (266)
.+++++|+.+|++|+++ +|+++.+++++|.++. ..|++++|+.+|++|++++|+++.+++++|.++.. .|++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFR-TLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-LGRYEQG 80 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-cCCHHHH
Confidence 46889999999999999 6999999999999886 58999999999999999999999999999999877 7999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccc
Q 024536 210 KSYFDRAVHSAPDDCHVLASYARFLWDAGEEED 242 (266)
Q Consensus 210 i~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~e 242 (266)
+.+|++++.+.|+++.+......+....+..++
T Consensus 81 ~~~~~~al~~~p~~~~~~~~~~ai~~~~~~l~~ 113 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQSYKQAILFYADKLDE 113 (117)
T ss_dssp HHHHHHHHHHHCCCHHHHHTHHHHHHHTTCTTC
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987766666666665544
No 26
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.62 E-value=4.4e-15 Score=117.92 Aligned_cols=98 Identities=15% Similarity=-0.021 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.+|+++|.++. ..|++++|+.+|++|+.++|+++.+++++|.++.. .|++++|+.+|
T Consensus 32 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 109 (142)
T 2xcb_A 32 GKWDDAQKIFQALCMLDHYDARYFLGLGACRQ-SLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ-LGDLDGAESGF 109 (142)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999999886 68999999999999999999999999999999876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHH
Q 024536 214 DRAVHSAPDDCHVLASYARF 233 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~l 233 (266)
+++++++|+++........+
T Consensus 110 ~~al~~~p~~~~~~~~~~~~ 129 (142)
T 2xcb_A 110 YSARALAAAQPAHEALAARA 129 (142)
T ss_dssp HHHHHHHHTCGGGHHHHHHH
T ss_pred HHHHHhCCCCcchHHHHHHH
Confidence 99999999987665444433
No 27
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.62 E-value=3e-14 Score=106.17 Aligned_cols=103 Identities=19% Similarity=0.328 Sum_probs=96.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++.++|.++.++.++|.++.. .+++++|+.+|
T Consensus 23 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~ 100 (125)
T 1na0_A 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYY 100 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 68999999999999999999999999999876 58999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAG 238 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G 238 (266)
++++.++|+++.++..++.++...|
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 101 QKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 9999999999999999999887654
No 28
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.62 E-value=7.8e-15 Score=109.98 Aligned_cols=112 Identities=18% Similarity=0.290 Sum_probs=105.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..+++++|..+|++++..+|.++.++.++|.++.. .+++++|+.+|
T Consensus 15 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 92 (136)
T 2fo7_A 15 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYY 92 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCcchhHHHHHHHHHH-HhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 68999999999999999999999999998876 57999999999999999999999999999998866 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
++++...|++..++..++.++...|++++|.+.-
T Consensus 93 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 126 (136)
T 2fo7_A 93 QKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYY 126 (136)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHH
Confidence 9999999999999999999999999999998643
No 29
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.61 E-value=3.1e-15 Score=125.89 Aligned_cols=98 Identities=22% Similarity=0.231 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGD----------FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH 203 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd----------~e~A~~~~erAL~ldP~da~al~nla~ll~~~~ 203 (266)
..+++|++.|++|++++|+++.+|+|+|.++.. .++ +++|+.+|++||+++|+++.+|+++|.+|....
T Consensus 16 ~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~-l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg 94 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE-LSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFA 94 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-hcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhc
Confidence 578999999999999999999999999998763 343 579999999999999999999999999997632
Q ss_pred ----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 024536 204 ----------KDAPRAKSYFDRAVHSAPDDCHVLASYAR 232 (266)
Q Consensus 204 ----------gd~deAi~~~ekAL~l~P~da~a~~~lA~ 232 (266)
+++++|+.+|++||+++|++..++.++..
T Consensus 95 ~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~ 133 (158)
T 1zu2_A 95 FLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEM 133 (158)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 58999999999999999999887766543
No 30
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.61 E-value=3.6e-15 Score=120.27 Aligned_cols=109 Identities=14% Similarity=0.096 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHHHHH------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA------------------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMY 195 (266)
Q Consensus 134 ~~~eeA~~~y~rALel------------------~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nl 195 (266)
+++++|+.+|++||++ +|.++.+|+|+|.++. ..|++++|+.+|++||.++|+++.+|+++
T Consensus 25 ~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 103 (162)
T 3rkv_A 25 KDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL-NIGDLHEAEETSSEVLKREETNEKALFRR 103 (162)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 6899999999999999 7888899999999886 58999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcCCccccc
Q 024536 196 GDLIWINHKDAPRAKSYFDRAVHSAPDDC-HVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 196 a~ll~~~~gd~deAi~~~ekAL~l~P~da-~a~~~lA~ll~~~G~~~eA~ 244 (266)
|.++.. .|++++|+.+|++|+.++|+++ .+...+..+.....+..++.
T Consensus 104 g~~~~~-~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~ 152 (162)
T 3rkv_A 104 AKARIA-AWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADS 152 (162)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHH-HhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999877 8999999999999999999999 67778887777666555544
No 31
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.61 E-value=3.2e-15 Score=140.40 Aligned_cols=108 Identities=11% Similarity=0.054 Sum_probs=101.2
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 024536 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFD 214 (266)
Q Consensus 135 ~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~e 214 (266)
++++|+.+|++||+++|+++.+|+++|.++. ..|++++|+.+|++||+++|+++.+|+++|.++.. .|++++|+.+|+
T Consensus 147 d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~-~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~-~g~~~eAl~~~~ 224 (382)
T 2h6f_A 147 DLHEEMNYITAIIEEQPKNYQVWHHRRVLVE-WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE-FKLWDNELQYVD 224 (382)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH-cCChHHHHHHHH
Confidence 4999999999999999999999999999886 57999999999999999999999999999999877 799999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHH-cCCccccc
Q 024536 215 RAVHSAPDDCHVLASYARFLWD-AGEEEDDD 244 (266)
Q Consensus 215 kAL~l~P~da~a~~~lA~ll~~-~G~~~eA~ 244 (266)
+||+++|+++.+|+++|.++.. .+..++|+
T Consensus 225 ~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~ 255 (382)
T 2h6f_A 225 QLLKEDVRNNSVWNQRYFVISNTTGYNDRAV 255 (382)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCSCSHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHhcCcchHHH
Confidence 9999999999999999999999 55557773
No 32
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.61 E-value=6e-15 Score=134.74 Aligned_cols=109 Identities=15% Similarity=0.119 Sum_probs=104.3
Q ss_pred CCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPED---------------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDL 198 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~---------------~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~l 198 (266)
+++++|+.+|++|++++|++ +.+|+|+|.++. ..|++++|+.+|++||+++|+++.+++++|.+
T Consensus 161 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 239 (336)
T 1p5q_A 161 GKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHL-KLQAFSAAIESCNKALELDSNNEKGLSRRGEA 239 (336)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 79999999999999999999 699999999886 58999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccc
Q 024536 199 IWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 199 l~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~ 244 (266)
+.. .|++++|+.+|++|++++|+++.++..++.++..+++.++|.
T Consensus 240 ~~~-~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~ 284 (336)
T 1p5q_A 240 HLA-VNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLARE 284 (336)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 877 899999999999999999999999999999999999999885
No 33
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.61 E-value=3.9e-15 Score=116.58 Aligned_cols=90 Identities=12% Similarity=-0.031 Sum_probs=77.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.+|+++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++|+.+|
T Consensus 31 g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~-~g~~~~A~~~~ 108 (121)
T 1hxi_A 31 ANLAEAALAFEAVCQKEPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-EHNANAALASL 108 (121)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999999876 58999999999999999999999999999998876 78999999999
Q ss_pred HHHHHhCCCCHH
Q 024536 214 DRAVHSAPDDCH 225 (266)
Q Consensus 214 ekAL~l~P~da~ 225 (266)
+++++++|+++.
T Consensus 109 ~~al~~~P~~~~ 120 (121)
T 1hxi_A 109 RAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHC-------
T ss_pred HHHHHhCcCCCC
Confidence 999999998754
No 34
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.61 E-value=3.2e-14 Score=105.19 Aligned_cols=99 Identities=17% Similarity=0.198 Sum_probs=93.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..+++++|..+|++++..+|+++.++.++|.++.. .|++++|+.+|
T Consensus 18 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 95 (118)
T 1elw_A 18 GNIDDALQCYSEAIKLDPHNHVLYSNRSAAYA-KKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF-LNRFEEAKRTY 95 (118)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 68999999999999999999999999999876 58999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHH
Q 024536 214 DRAVHSAPDDCHVLASYARFL 234 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll 234 (266)
+++++++|+++.++..++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 96 EEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999998888764
No 35
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.60 E-value=2.9e-14 Score=113.06 Aligned_cols=111 Identities=14% Similarity=0.007 Sum_probs=104.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..+++++|..+|++++..+|+++.++..+|.++.. .|++++|+.+|
T Consensus 56 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 133 (186)
T 3as5_A 56 GAVDRGTELLERSLADAPDNVKVATVLGLTYV-QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDN-LGRFDEAIDSF 133 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH-cCcHHHHHHHH
Confidence 68999999999999999999999999999876 57999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++++..+|+++.++..+|.++...|++++|.+.
T Consensus 134 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 166 (186)
T 3as5_A 134 KIALGLRPNEGKVHRAIAFSYEQMGRHEEALPH 166 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHhcCccchHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999999999999854
No 36
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.59 E-value=1.4e-14 Score=120.47 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=101.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCH----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDA----------------LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~----------------~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ 197 (266)
+++++|+.+|++++++.|.++ .++.++|.++. ..+++++|+.+|++|+.++|+++.+++++|.
T Consensus 52 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 130 (198)
T 2fbn_A 52 NEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYN-KNKDYPKAIDHASKVLKIDKNNVKALYKLGV 130 (198)
T ss_dssp TCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 689999999999999999998 89999999886 5899999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccc
Q 024536 198 LIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~ 244 (266)
++.. .+++++|+.+|++|+.++|++..++..++.++...++.+++.
T Consensus 131 ~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 131 ANMY-FGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHHH-HTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHH-cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9876 799999999999999999999999999999999998888877
No 37
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.59 E-value=2.5e-15 Score=126.65 Aligned_cols=105 Identities=14% Similarity=0.124 Sum_probs=99.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHHcCCH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG-------NVLSMYGDLIWINHKDA 206 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da-------~al~nla~ll~~~~gd~ 206 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++ .++.++|.++.. .|++
T Consensus 56 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~-~~~~ 133 (228)
T 4i17_A 56 KKYKEAADYFDIAIKKNYNLANAYIGKSAAYR-DMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQ-AGNI 133 (228)
T ss_dssp TCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH-TTCH
T ss_pred hcHHHHHHHHHHHHHhCcchHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHH-hccH
Confidence 68999999999999999999999999999886 68999999999999999999999 669999998876 8999
Q ss_pred HHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCc
Q 024536 207 PRAKSYFDRAVHSAPD--DCHVLASYARFLWDAGEE 240 (266)
Q Consensus 207 deAi~~~ekAL~l~P~--da~a~~~lA~ll~~~G~~ 240 (266)
++|+.+|++|++++|+ ++.++.++|.++...|+.
T Consensus 134 ~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 134 EKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999887
No 38
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.58 E-value=1.8e-14 Score=138.34 Aligned_cols=113 Identities=17% Similarity=0.083 Sum_probs=103.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+++|++|++++|+++.+|+++|.++. ..+++++|+.+|++|++++|+++.+++++|.++.. .|++++|+.+|
T Consensus 20 g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~eA~~~~ 97 (477)
T 1wao_1 20 KDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAALRDY 97 (477)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 79999999999999999999999999999886 58999999999999999999999999999999877 79999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHH--HHHcCCccccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARF--LWDAGEEEDDDDGDD 248 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~l--l~~~G~~~eA~~~~~ 248 (266)
++|++++|+++.++..++.+ +...+++++|++..+
T Consensus 98 ~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 98 ETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999988 888999999997644
No 39
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.58 E-value=1.8e-14 Score=128.79 Aligned_cols=111 Identities=14% Similarity=0.172 Sum_probs=106.2
Q ss_pred CCHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPE--DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~--~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~ 211 (266)
+++++|+.+|+++++++|+ ++.+++++|.++. ..|++++|+.+|+++++++|+++.+|.++|.++.. .|++++|+.
T Consensus 191 g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~ 268 (365)
T 4eqf_A 191 SVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFH-LSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLAN-GDRSEEAVE 268 (365)
T ss_dssp HHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHH
Confidence 7899999999999999999 9999999999886 58999999999999999999999999999999876 899999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 212 YFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 212 ~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+|+++++++|+++.++.++|.++...|++++|++.
T Consensus 269 ~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 303 (365)
T 4eqf_A 269 AYTRALEIQPGFIRSRYNLGISCINLGAYREAVSN 303 (365)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHH
Confidence 99999999999999999999999999999999954
No 40
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.58 E-value=1.7e-14 Score=111.46 Aligned_cols=102 Identities=15% Similarity=0.038 Sum_probs=84.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|++|+.++|+++.+++++|.++.. .|++++|+.+|
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A~~~~ 100 (137)
T 3q49_B 23 RKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYDEAIANL 100 (137)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 67888999999999999999989999888776 57889999999999999999999888888888766 78899999999
Q ss_pred HHHHHhCCC-----CHHHHHHHHHHHHHc
Q 024536 214 DRAVHSAPD-----DCHVLASYARFLWDA 237 (266)
Q Consensus 214 ekAL~l~P~-----da~a~~~lA~ll~~~ 237 (266)
++++.++|+ +..+...+..+....
T Consensus 101 ~~a~~~~p~~~~~~~~~~~~~l~~~~~~~ 129 (137)
T 3q49_B 101 QRAYSLAKEQRLNFGDDIPSALRIAKKKR 129 (137)
T ss_dssp HHHHHHHHHTTCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHChhHHHHHHHHHHHHHHHHHHHH
Confidence 999998888 666666666554433
No 41
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.57 E-value=3.4e-14 Score=111.90 Aligned_cols=94 Identities=19% Similarity=0.285 Sum_probs=80.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHHcCCH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG-------NVLSMYGDLIWINHKDA 206 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da-------~al~nla~ll~~~~gd~ 206 (266)
+++++|+.+|++||+++|+++.+|+|+|.++. ..|++++|+.+|++||+++|++. .++.++|.++.. .+++
T Consensus 22 ~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~ 99 (127)
T 4gcn_A 22 KDFEKAHVHYDKAIELDPSNITFYNNKAAVYF-EEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQK-QNDL 99 (127)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTCH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHH-HhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHH-cCCH
Confidence 68999999999999999999999999998876 58999999999999999988763 578888888765 7999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHH
Q 024536 207 PRAKSYFDRAVHSAPDDCHVLASY 230 (266)
Q Consensus 207 deAi~~~ekAL~l~P~da~a~~~l 230 (266)
++|+.+|++|+...|+ +.....+
T Consensus 100 ~~A~~~~~kal~~~~~-~~~~~~l 122 (127)
T 4gcn_A 100 SLAVQWFHRSLSEFRD-PELVKKV 122 (127)
T ss_dssp HHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHHHHHHHHHhhCcC-HHHHHHH
Confidence 9999999999999885 5554443
No 42
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.57 E-value=6.3e-15 Score=147.03 Aligned_cols=117 Identities=9% Similarity=-0.006 Sum_probs=108.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+++|+++++++|+++.+|+++|.++. ..|++++|+++|++|++++|+++.+++++|.++.. .|++++ +.+|
T Consensus 447 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~-~g~~~~-~~~~ 523 (681)
T 2pzi_A 447 GDVAKATRKLDDLAERVGWRWRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL-AGNTDE-HKFY 523 (681)
T ss_dssp TCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH-HTCCCT-TCHH
T ss_pred CCHHHHHHHHHHHhccCcchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCChHH-HHHH
Confidence 78999999999999999999999999999886 58999999999999999999999999999999876 799999 9999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccccccccccC
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDDQETCA 253 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~~~~~~ 253 (266)
++|++++|+++.+++++|.++...|++++|++.-+..-..
T Consensus 524 ~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 563 (681)
T 2pzi_A 524 QTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPT 563 (681)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTT
T ss_pred HHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999655444333
No 43
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.56 E-value=4.2e-14 Score=118.03 Aligned_cols=110 Identities=13% Similarity=0.041 Sum_probs=68.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|.++.++.++|.++. ..|++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|
T Consensus 105 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 182 (243)
T 2q7f_A 105 EMYKEAKDMFEKALRAGMENGDLFYMLGTVLV-KLEQPKLALPYLQRAVELNENDTEARFQFGMCLAN-EGMLDEALSQF 182 (243)
T ss_dssp TCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 35566666666666666666666666665554 35666666666666666666666666666665544 45666666666
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
++++..+|+++.++..+|.++...|++++|++
T Consensus 183 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 214 (243)
T 2q7f_A 183 AAVTEQDPGHADAFYNAGVTYAYKENREKALE 214 (243)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHccCHHHHHH
Confidence 66666666666666666666666666666654
No 44
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=5.7e-14 Score=108.75 Aligned_cols=100 Identities=17% Similarity=0.069 Sum_probs=93.0
Q ss_pred CCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPED---ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAK 210 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~---~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi 210 (266)
+++++|+.+|+++++++|++ +.++.++|.++. ..+++++|+.+|++++.++|+++.+++++|.++.. .+++++|+
T Consensus 42 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~ 119 (148)
T 2dba_A 42 GDYGGALAAYTQALGLDATPQDQAVLHRNRAACHL-KLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK-LGRLDQAV 119 (148)
T ss_dssp TCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH-HTCHHHHH
T ss_pred CCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH-cCCHHHHH
Confidence 78999999999999999998 899999999876 58999999999999999999999999999998877 79999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHH
Q 024536 211 SYFDRAVHSAPDDCHVLASYARFLW 235 (266)
Q Consensus 211 ~~~ekAL~l~P~da~a~~~lA~ll~ 235 (266)
.+|+++++++|++..++..++.+..
T Consensus 120 ~~~~~al~~~p~~~~~~~~l~~~~~ 144 (148)
T 2dba_A 120 LDLQRCVSLEPKNKVFQEALRNISG 144 (148)
T ss_dssp HHHHHHHHHCSSCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 9999999999999999988877643
No 45
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.55 E-value=2.5e-14 Score=129.25 Aligned_cols=110 Identities=17% Similarity=0.177 Sum_probs=58.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.+++.++.. .|++++|+.+|
T Consensus 251 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 328 (388)
T 1w3b_A 251 GLIDLAIDTYRRAIELQPHFPDAYCNLANALK-EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE-QGNIEEAVRLY 328 (388)
T ss_dssp TCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 34555555555555555555555555555443 34555555555555555555555555555554433 45555555555
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
+++++++|+++.++..++.++...|++++|++
T Consensus 329 ~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 360 (388)
T 1w3b_A 329 RKALEVFPEFAAAHSNLASVLQQQGKLQEALM 360 (388)
T ss_dssp HHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 55555555555555555555555555555554
No 46
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.55 E-value=1.2e-13 Score=115.25 Aligned_cols=111 Identities=16% Similarity=0.239 Sum_probs=104.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|
T Consensus 71 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 148 (243)
T 2q7f_A 71 NELERALAFYDKALELDSSAATAYYGAGNVYV-VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK-LEQPKLALPYL 148 (243)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH-TSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcchHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccHHHHHHHH
Confidence 68999999999999999999999999999876 58999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++++.++|+++.++..+|.++...|++++|++.
T Consensus 149 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 181 (243)
T 2q7f_A 149 QRAVELNENDTEARFQFGMCLANEGMLDEALSQ 181 (243)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999999999999854
No 47
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.55 E-value=3.6e-14 Score=128.18 Aligned_cols=113 Identities=17% Similarity=0.148 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+..|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++.. .|++++|+.+|
T Consensus 217 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 294 (388)
T 1w3b_A 217 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYY-EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKE-KGSVAEAEDCY 294 (388)
T ss_dssp TCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHH-HSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 45566777777777777777777777776655 46777777777777777777777777777776655 57777777777
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCccccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~ 248 (266)
+++++++|+++.++..++.++...|++++|++.-+
T Consensus 295 ~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 329 (388)
T 1w3b_A 295 NTALRLCPTHADSLNNLANIKREQGNIEEAVRLYR 329 (388)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 77777777777777777777777777777775433
No 48
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.55 E-value=2e-13 Score=104.26 Aligned_cols=104 Identities=12% Similarity=0.069 Sum_probs=93.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHH
Q 024536 134 KESESMDVYYQEMIKAYPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD---GNVLSMYGDLIWINHKDAP 207 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~---~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d---a~al~nla~ll~~~~gd~d 207 (266)
+++++|+.+|+++++.+|+++ .+++++|.++. ..|++++|+.+|++++..+|++ +.+++++|.++.. .|+++
T Consensus 16 ~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~-~g~~~ 93 (129)
T 2xev_A 16 GKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-ATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG-EGKNT 93 (129)
T ss_dssp TCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHH
T ss_pred CCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-cCCHH
Confidence 689999999999999999999 89999999886 5899999999999999999999 8999999999876 89999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 024536 208 RAKSYFDRAVHSAPDDCHVLASYARFLWDAGE 239 (266)
Q Consensus 208 eAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~ 239 (266)
+|+.+|++++...|+++.+......+....++
T Consensus 94 ~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 94 EAQQTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp HHHHHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 99999999999999999887777665554443
No 49
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.55 E-value=3.9e-14 Score=112.27 Aligned_cols=111 Identities=14% Similarity=0.074 Sum_probs=105.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|.++.++..+|.++. ..|++++|..+|++++..+|+++.++.++|.++.. .+++++|+.+|
T Consensus 22 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 99 (186)
T 3as5_A 22 GRYSQAVMLLEQVYDADAFDVDVALHLGIAYV-KTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ-VQKYDLAVPLL 99 (186)
T ss_dssp TCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCccChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 68999999999999999999999999999876 58999999999999999999999999999998876 79999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++++..+|+++.++..+|.++...|++++|++.
T Consensus 100 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~ 132 (186)
T 3as5_A 100 IKVAEANPINFNVRFRLGVALDNLGRFDEAIDS 132 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHH
Confidence 999999999999999999999999999999864
No 50
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.54 E-value=1e-14 Score=123.97 Aligned_cols=111 Identities=15% Similarity=0.128 Sum_probs=88.2
Q ss_pred CCHHHHHHHHHHHHHH----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 024536 134 KESESMDVYYQEMIKA----YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRA 209 (266)
Q Consensus 134 ~~~eeA~~~y~rALel----~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deA 209 (266)
+++++|+.+|+++++. +|.++.+++++|.++. ..|++++|+.+|++|+.++|+++.++.++|.++.. .|++++|
T Consensus 19 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~A 96 (275)
T 1xnf_A 19 LQQEVILARMEQILASRALTDDERAQLLYERGVLYD-SLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ-AGNFDAA 96 (275)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHH
T ss_pred chHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH-HcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-ccCHHHH
Confidence 5778888888888887 3456677888887765 47888888888888888888888888888877765 6788888
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 210 KSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 210 i~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+.+|++|++++|+++.++..+|.++...|++++|++.
T Consensus 97 ~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 133 (275)
T 1xnf_A 97 YEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDD 133 (275)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHH
Confidence 8888888888888888888888888888888888754
No 51
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.54 E-value=6.2e-14 Score=117.41 Aligned_cols=111 Identities=17% Similarity=0.099 Sum_probs=101.2
Q ss_pred CCHHHHHHHHHHHHH--------------------------HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 024536 134 KESESMDVYYQEMIK--------------------------AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG 187 (266)
Q Consensus 134 ~~~eeA~~~y~rALe--------------------------l~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~ 187 (266)
+++++|+.+|+++++ .+|.++.++.++|.++. ..|++++|+.+|++++.++|.
T Consensus 93 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~ 171 (258)
T 3uq3_A 93 GDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPE 171 (258)
T ss_dssp TCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTT
T ss_pred ccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcc
Confidence 567777777777777 77888899999999886 589999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 188 DGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 188 da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++.++.++|.++.. .|++++|+.+|+++++++|+++.++..+|.++...|++++|.+.
T Consensus 172 ~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 229 (258)
T 3uq3_A 172 DARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALET 229 (258)
T ss_dssp CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999998876 89999999999999999999999999999999999999999854
No 52
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.54 E-value=3e-14 Score=137.23 Aligned_cols=111 Identities=13% Similarity=0.066 Sum_probs=100.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+++|+++++++|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++|+.+|
T Consensus 37 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~ 114 (568)
T 2vsy_A 37 GDTTAGEMAVQRGLALHPGHPEAVARLGRVRW-TQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED-AGQAEAAAAAY 114 (568)
T ss_dssp TCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68899999999999999999999999998876 58999999999999999999999999999988876 78999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHc---CCccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDA---GEEEDDDDG 246 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~---G~~~eA~~~ 246 (266)
++|++++|+++.++.+++.++... |++++|++.
T Consensus 115 ~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~ 150 (568)
T 2vsy_A 115 TRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQ 150 (568)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 999999999999999999999999 888888853
No 53
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.53 E-value=1.8e-14 Score=138.81 Aligned_cols=111 Identities=18% Similarity=0.244 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+++|+++++++|+++.+|+++|.++. ..|++++|+++|++|++++|+++.++.++|.++.. .|++++|+.+|
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 80 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVAWLMLADAEL-GMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWT-QQRHAEAAVLL 80 (568)
T ss_dssp ------------------CCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 57899999999999999999999999999886 57999999999999999999999999999999876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++|++++|+++.++.++|.++...|++++|++.
T Consensus 81 ~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~ 113 (568)
T 2vsy_A 81 QQASDAAPEHPGIALWLGHALEDAGQAEAAAAA 113 (568)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999999999999964
No 54
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.53 E-value=5.9e-14 Score=108.06 Aligned_cols=94 Identities=15% Similarity=0.021 Sum_probs=87.7
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 024536 151 PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASY 230 (266)
Q Consensus 151 P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~l 230 (266)
|..+..|.++|..++ ..|++++|+.+|++||.++|+++.++.++|.++.. .|++++|+.+|++|++++|+++.++..+
T Consensus 1 p~~a~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l 78 (126)
T 3upv_A 1 SMKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNFVRAYIRK 78 (126)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 456788999998876 58999999999999999999999999999999877 8999999999999999999999999999
Q ss_pred HHHHHHcCCccccccc
Q 024536 231 ARFLWDAGEEEDDDDG 246 (266)
Q Consensus 231 A~ll~~~G~~~eA~~~ 246 (266)
|.++...|++++|++.
T Consensus 79 g~~~~~~~~~~~A~~~ 94 (126)
T 3upv_A 79 ATAQIAVKEYASALET 94 (126)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhCHHHHHHH
Confidence 9999999999999854
No 55
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.53 E-value=1e-13 Score=122.92 Aligned_cols=111 Identities=14% Similarity=0.171 Sum_probs=88.8
Q ss_pred CCHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPE--DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~--~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~ 211 (266)
+++++|+.+|+++++++|+ ++.++.++|.++. ..|++++|+.+|++++.++|+++.++.++|.++.. .|++++|+.
T Consensus 195 ~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~ 272 (368)
T 1fch_A 195 SLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFN-LSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLAN-GNQSEEAVA 272 (368)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-cCCHHHHHH
Confidence 6778888888888888888 7788888887765 47888888888888888888888888888877765 678888888
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 212 YFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 212 ~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+|++++.++|+++.++..+|.++...|++++|++.
T Consensus 273 ~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 307 (368)
T 1fch_A 273 AYRRALELQPGYIRSRYNLGISCINLGAHREAVEH 307 (368)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHH
Confidence 88888888888888888888888888888888743
No 56
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.53 E-value=3e-14 Score=135.57 Aligned_cols=109 Identities=16% Similarity=0.191 Sum_probs=99.9
Q ss_pred CCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPED---------------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDL 198 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~---------------~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~l 198 (266)
+++++|+.+|++||+++|.+ ..+|+|+|.++. ..+++++|+.+|++||+++|+++.+|+++|.+
T Consensus 282 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a 360 (457)
T 1kt0_A 282 GKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYL-KLREYTKAVECCDKALGLDSANEKGLYRRGEA 360 (457)
T ss_dssp TCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence 79999999999999999999 799999999886 58999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccc
Q 024536 199 IWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 199 l~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~ 244 (266)
+.. .+++++|+.+|++|++++|++..++..++.++...++.++|+
T Consensus 361 ~~~-~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~ 405 (457)
T 1kt0_A 361 QLL-MNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERD 405 (457)
T ss_dssp HHH-TTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 877 899999999999999999999999999999999999888776
No 57
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.53 E-value=9.6e-14 Score=117.26 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=100.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL--AKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~--ldP~da~al~nla~ll~~~~gd~deAi~ 211 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++. .+|.++.++.++|.++.. .|++++|+.
T Consensus 85 ~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~ 162 (252)
T 2ho1_A 85 MEPKLADEEYRKALASDSRNARVLNNYGGFLY-EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ-MKKPAQAKE 162 (252)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH-cCCHHHHHH
Confidence 58899999999999999999999999998876 58999999999999999 888899999999988876 789999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 212 YFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 212 ~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
+|+++++++|+++.++..+|.++...|++++|++.-
T Consensus 163 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 198 (252)
T 2ho1_A 163 YFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYY 198 (252)
T ss_dssp HHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999999999998643
No 58
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.53 E-value=1.7e-14 Score=121.44 Aligned_cols=98 Identities=13% Similarity=0.050 Sum_probs=88.2
Q ss_pred CCHHHHHHHHHHHHHHCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCHHHH--
Q 024536 134 KESESMDVYYQEMIKAYPE-------DAL-----VLANYAKFLKEIRGDFVKAEEYCGRAILA-------KPGDGNVL-- 192 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~-------~~~-----al~nlA~~L~~~~gd~e~A~~~~erAL~l-------dP~da~al-- 192 (266)
+++++|+..|++||+++|+ +.. +|.|+|.++. ..|++++|+.+|++||++ +|+++.+|
T Consensus 25 g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~-~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~ 103 (159)
T 2hr2_A 25 GEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALA-GLRSFDEALHSADKALHYFNRRGELNQDEGKLWIS 103 (159)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHH
Confidence 6899999999999999999 444 9999999886 589999999999999999 99999999
Q ss_pred --HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 024536 193 --SMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARF 233 (266)
Q Consensus 193 --~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~l 233 (266)
++.|.++.. .|++++|+.+|++|++++|++..+...+..+
T Consensus 104 ~~~~rG~aL~~-lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~ 145 (159)
T 2hr2_A 104 AVYSRALALDG-LGRGAEAMPEFKKVVEMIEERKGETPGKERM 145 (159)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHCCSCCTTHHHH
T ss_pred HHHhHHHHHHH-CCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 999999876 7999999999999999999987765544443
No 59
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.52 E-value=1e-13 Score=122.91 Aligned_cols=90 Identities=16% Similarity=0.043 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|++++.++|+++.++.++|.++.. .|++++|+.+|
T Consensus 231 g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 308 (368)
T 1fch_A 231 GEYDKAVDCFTAALSVRPNDYLLWNKLGATLA-NGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN-LGAHREAVEHF 308 (368)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 79999999999999999999999999999886 58999999999999999999999999999999877 79999999999
Q ss_pred HHHHHhCCCCHH
Q 024536 214 DRAVHSAPDDCH 225 (266)
Q Consensus 214 ekAL~l~P~da~ 225 (266)
++++.++|++..
T Consensus 309 ~~al~~~~~~~~ 320 (368)
T 1fch_A 309 LEALNMQRKSRG 320 (368)
T ss_dssp HHHHHHHHTC--
T ss_pred HHHHHhCCCCCC
Confidence 999999998743
No 60
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.52 E-value=6.2e-14 Score=116.04 Aligned_cols=107 Identities=15% Similarity=0.071 Sum_probs=99.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|++++ +| ++.+++++|.++. ..|++++|+.+|++|+.++|+++.++.++|.++.. .|++++|+.+|
T Consensus 20 ~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~ 94 (213)
T 1hh8_A 20 KDWKGALDAFSAVQ--DP-HSRICFNIGCMYT-ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ-TEKYDLAIKDL 94 (213)
T ss_dssp TCHHHHHHHHHTSS--SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHc--CC-ChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cccHHHHHHHH
Confidence 68999999999996 44 7899999999886 58999999999999999999999999999999877 89999999999
Q ss_pred HHHHHhCCCCH----------------HHHHHHHHHHHHcCCcccccc
Q 024536 214 DRAVHSAPDDC----------------HVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 214 ekAL~l~P~da----------------~a~~~lA~ll~~~G~~~eA~~ 245 (266)
++++++.|++. .++.++|.++...|++++|++
T Consensus 95 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 142 (213)
T 1hh8_A 95 KEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEE 142 (213)
T ss_dssp HHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHH
Confidence 99999988877 999999999999999999985
No 61
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.52 E-value=7.4e-15 Score=120.45 Aligned_cols=112 Identities=15% Similarity=0.087 Sum_probs=89.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|++++..+| ++..+..++.+......+..+|+.+|
T Consensus 20 g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~ 97 (176)
T 2r5s_A 20 GEHAQALNVIQTLSDELQSRGDVKLAKADCLL-ETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRL 97 (176)
T ss_dssp TCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHH-HTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHH
Confidence 68999999999999999999999999999876 58999999988888888888 77766655544332223344578888
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
+++++++|+++.++..+|.++...|++++|++.-
T Consensus 98 ~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~ 131 (176)
T 2r5s_A 98 EQELAANPDNFELACELAVQYNQVGRDEEALELL 131 (176)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHH
Confidence 8888888888888888888888888888888543
No 62
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.52 E-value=1.8e-13 Score=116.26 Aligned_cols=109 Identities=12% Similarity=0.044 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.++.++|.++. ..|++++|..+|++|+.++|+++.++.++|.++.. .|++++|+.+|
T Consensus 57 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~ 134 (275)
T 1xnf_A 57 GLRALARNDFSQALAIRPDMPEVFNYLGIYLT-QAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY-GGRDKLAQDDL 134 (275)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH-hccHHHHHHHH
Confidence 68999999999999999999999999999886 58999999999999999999999999999999877 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
+++++++|++..+...++. +...|++++|++
T Consensus 135 ~~a~~~~~~~~~~~~~~~~-~~~~~~~~~A~~ 165 (275)
T 1xnf_A 135 LAFYQDDPNDPFRSLWLYL-AEQKLDEKQAKE 165 (275)
T ss_dssp HHHHHHCTTCHHHHHHHHH-HHHHHCHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHH-HHHhcCHHHHHH
Confidence 9999999999755544443 344466666663
No 63
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.52 E-value=2.4e-14 Score=136.53 Aligned_cols=110 Identities=8% Similarity=-0.164 Sum_probs=104.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIR--------GDFVKAEEYCGRAILAKP---GDGNVLSMYGDLIWIN 202 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~--------gd~e~A~~~~erAL~ldP---~da~al~nla~ll~~~ 202 (266)
+++++|+.+|++|++++|+++.+|+++|.++. .. +++++|+.+|++|++++| +++.+|+++|.++..
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~- 270 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYL-SLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKY- 270 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH-
Confidence 68999999999999999999999999999886 46 889999999999999999 999999999999877
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 203 HKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 203 ~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
.|++++|+.+|++|++++|+++.++..++.++...+++++|++
T Consensus 271 ~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi~ 313 (474)
T 4abn_A 271 EESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLE 313 (474)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999984
No 64
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.52 E-value=9.3e-14 Score=120.51 Aligned_cols=113 Identities=17% Similarity=0.184 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------CCCHHHHHHHHHHHHHHcC
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAK---------PGDGNVLSMYGDLIWINHK 204 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ld---------P~da~al~nla~ll~~~~g 204 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++.+. |.++.++.++|.++.. .|
T Consensus 173 ~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g 250 (330)
T 3hym_B 173 NNSKLAERFFSQALSIAPEDPFVMHEVGVVAF-QNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK-LK 250 (330)
T ss_dssp TCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH-TT
T ss_pred hhHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH-hc
Confidence 46677777777777777777777777776654 4677777777777777765 5566677777766654 67
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccccc
Q 024536 205 DAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 205 d~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~ 248 (266)
++++|+.+|+++++++|+++.++..+|.++...|++++|++.-+
T Consensus 251 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 294 (330)
T 3hym_B 251 KYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFH 294 (330)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHH
Confidence 77777777777777777777777777777777777777775433
No 65
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.52 E-value=1.7e-13 Score=112.46 Aligned_cols=110 Identities=20% Similarity=0.181 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIR-GDFVKAEEYCGRAIL--AKPGDGNVLSMYGDLIWINHKDAPRAK 210 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~-gd~e~A~~~~erAL~--ldP~da~al~nla~ll~~~~gd~deAi 210 (266)
+++++|+.+|+++++.+|+++.++.++|.++. .. |++++|+.+|++++. .+|.+..++.++|.++.. .|++++|+
T Consensus 56 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~ 133 (225)
T 2vq2_A 56 KVNDKAQESFRQALSIKPDSAEINNNYGWFLC-GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAK-QGQFGLAE 133 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHH-TTCHHHHH
T ss_pred CChHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHH-cCCHHHHH
Confidence 35566666666666666666666666665554 35 566666666666666 445555566666655544 55666666
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 211 SYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 211 ~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
.+|++++..+|+++.++..+|.++...|++++|++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 168 (225)
T 2vq2_A 134 AYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADY 168 (225)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHH
Confidence 66666666666666666666666666666666553
No 66
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.52 E-value=6.6e-14 Score=119.30 Aligned_cols=116 Identities=8% Similarity=0.054 Sum_probs=102.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHcCCHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG----NVLSMYGDLIWINHKDAPRA 209 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da----~al~nla~ll~~~~gd~deA 209 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++. .|.++ .++.++|.++.. .|++++|
T Consensus 17 ~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~-~~~~~~A 93 (272)
T 3u4t_A 17 NNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYY-ELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMK-KGQDSLA 93 (272)
T ss_dssp TCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHH-HTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHH-TTCHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHH-cccHHHH
Confidence 68999999999999999999999999999776 68999999999999999 44444 458999998876 8999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccccccccc
Q 024536 210 KSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDDQETC 252 (266)
Q Consensus 210 i~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~~~~~ 252 (266)
+.+|+++++++|+++.++..+|.++...|++++|++.-+..-.
T Consensus 94 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 136 (272)
T 3u4t_A 94 IQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIR 136 (272)
T ss_dssp HHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCC
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999965444333
No 67
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.52 E-value=2.2e-13 Score=111.70 Aligned_cols=112 Identities=16% Similarity=0.161 Sum_probs=104.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-CCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH-KDAPRAKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~-gd~deAi~~ 212 (266)
+++++|+.+|+++++.+|+++.++..+|.++. ..|++++|..+|++++.++|+++.++.++|.++.. . |++++|+.+
T Consensus 22 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~~A~~~ 99 (225)
T 2vq2_A 22 QDYRQATASIEDALKSDPKNELAWLVRAEIYQ-YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCG-RLNRPAESMAY 99 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCcHHHHHHH
Confidence 68999999999999999999999999999876 58999999999999999999999999999998866 8 999999999
Q ss_pred HHHHHH--hCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 213 FDRAVH--SAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 213 ~ekAL~--l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
|++++. ..|.+..++..+|.++...|++++|++.-
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 136 (225)
T 2vq2_A 100 FDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYL 136 (225)
T ss_dssp HHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999999 77777899999999999999999998643
No 68
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.51 E-value=1.2e-13 Score=122.85 Aligned_cols=109 Identities=8% Similarity=-0.014 Sum_probs=76.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH--------------------------------
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRA-------------------------------- 181 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erA-------------------------------- 181 (266)
+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|+++
T Consensus 131 g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~ 209 (287)
T 3qou_A 131 SNYTDALPLLXDAWQLSNQNGEIGLLLAETLI-ALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQ 209 (287)
T ss_dssp TCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcchhHHHHHHHHHH-HCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHH
Confidence 78999999999999999999999999999876 578888877665555
Q ss_pred --HHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCccccc
Q 024536 182 --ILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD--CHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 182 --L~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~d--a~a~~~lA~ll~~~G~~~eA~ 244 (266)
++++|+++.+++++|.++.. .|++++|+.+|+++++++|++ +.++.+++.++...|+.++|+
T Consensus 210 ~al~~~P~~~~~~~~la~~l~~-~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~ 275 (287)
T 3qou_A 210 QQVAENPEDAALATQLALQLHQ-VGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALA 275 (287)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHhcCCccHHHHHHHHHHHHH-cccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHH
Confidence 55555555555555555544 555555555555555555555 555555555555555555554
No 69
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.51 E-value=3.3e-14 Score=104.51 Aligned_cols=97 Identities=14% Similarity=0.170 Sum_probs=74.8
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHH
Q 024536 150 YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPD--DCHVL 227 (266)
Q Consensus 150 ~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~--da~a~ 227 (266)
+|+++.+++++|.++. ..+++++|..+|++++.++|+++.++.++|.++.. .+++++|+.+|+++++++|+ +..++
T Consensus 2 ~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQY-DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-LERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp CCSSTTGGGGHHHHHH-SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred CCCcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 5777777777777665 46788888888888888888888888888877765 67788888888888888888 78888
Q ss_pred HHHHHHHHHc-CCccccccccc
Q 024536 228 ASYARFLWDA-GEEEDDDDGDD 248 (266)
Q Consensus 228 ~~lA~ll~~~-G~~~eA~~~~~ 248 (266)
..+|.++... |++++|++.-+
T Consensus 80 ~~l~~~~~~~~~~~~~A~~~~~ 101 (112)
T 2kck_A 80 AAKADALRYIEGKEVEAEIAEA 101 (112)
T ss_dssp HHHHHHHTTCSSCSHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHH
Confidence 8888888888 88888775433
No 70
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.51 E-value=2.9e-14 Score=135.99 Aligned_cols=110 Identities=11% Similarity=0.009 Sum_probs=103.7
Q ss_pred CCH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc---------
Q 024536 134 KES-ESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH--------- 203 (266)
Q Consensus 134 ~~~-eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~--------- 203 (266)
+++ ++|+.+|++|++++|+++.+|+++|.++. ..|++++|+.+|++|++++|+ +.++.++|.++.. .
T Consensus 116 g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~-~~~~~~~~~~ 192 (474)
T 4abn_A 116 PDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYW-KKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQ-LQTDSGDEHS 192 (474)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTT-CCCSCHHHHH
T ss_pred cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHH-hccCChhhhh
Confidence 578 99999999999999999999999999887 589999999999999999999 7999999998865 7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------CCccccccc
Q 024536 204 KDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDA--------GEEEDDDDG 246 (266)
Q Consensus 204 gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~--------G~~~eA~~~ 246 (266)
+++++|+.+|++|++++|+++.++.++|.++... |++++|++.
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~ 243 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSA 243 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHH
Confidence 8999999999999999999999999999999999 999999854
No 71
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.51 E-value=2e-13 Score=118.23 Aligned_cols=110 Identities=15% Similarity=0.215 Sum_probs=77.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|..+|++++..+|+++.++.++|.++.. .|++++|+.+|
T Consensus 152 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 229 (327)
T 3cv0_A 152 NEYRECRTLLHAALEMNPNDAQLHASLGVLYN-LSNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GNRPQEALDAY 229 (327)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 56677777777777777777777777776654 46777777777777777777777777777766655 66777777777
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
+++++++|+++.++..+|.++...|++++|++
T Consensus 230 ~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 261 (327)
T 3cv0_A 230 NRALDINPGYVRVMYNMAVSYSNMSQYDLAAK 261 (327)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHhccHHHHHH
Confidence 77777777777777777777777777777664
No 72
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.51 E-value=1.1e-13 Score=123.61 Aligned_cols=113 Identities=17% Similarity=-0.007 Sum_probs=104.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|+++.+|+++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++|+.+|
T Consensus 227 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 304 (365)
T 4eqf_A 227 GEFNRAIDAFNAALTVRPEDYSLWNRLGATLA-NGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCIN-LGAYREAVSNF 304 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 78999999999999999999999999999886 58999999999999999999999999999999877 79999999999
Q ss_pred HHHHHhCCC------------CHHHHHHHHHHHHHcCCccccccccc
Q 024536 214 DRAVHSAPD------------DCHVLASYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 214 ekAL~l~P~------------da~a~~~lA~ll~~~G~~~eA~~~~~ 248 (266)
++|++++|+ +..++..++.++...|+.+.+.+...
T Consensus 305 ~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~ 351 (365)
T 4eqf_A 305 LTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANL 351 (365)
T ss_dssp HHHHHHHHCC------------CHHHHHHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 999999998 36789999999999999998886533
No 73
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.51 E-value=2.3e-13 Score=102.38 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=93.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD-------GNVLSMYGDLIWINHKDA 206 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d-------a~al~nla~ll~~~~gd~ 206 (266)
+++++|+.+|+++++.+|.++.+++++|.++. ..+++++|..+|++++.++|++ +.+++++|.++.. .+++
T Consensus 18 ~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~ 95 (131)
T 1elr_A 18 KDFDTALKHYDKAKELDPTNMTYITNQAAVYF-EKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFK-EEKY 95 (131)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH-TTCH
T ss_pred cCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-hccH
Confidence 68999999999999999999999999999876 5899999999999999999988 9999999998876 8999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 024536 207 PRAKSYFDRAVHSAPDDCHVLASYARFLWDAGE 239 (266)
Q Consensus 207 deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~ 239 (266)
++|+.+|++++.+.| ++.++..++.++...++
T Consensus 96 ~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 96 KDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 999999999999999 68888888887766543
No 74
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.51 E-value=2.5e-13 Score=104.78 Aligned_cols=97 Identities=12% Similarity=0.032 Sum_probs=89.4
Q ss_pred HHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 024536 148 KAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVL 227 (266)
Q Consensus 148 el~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~ 227 (266)
..+|.++.++.++|..+. ..|++++|+.+|++++.++|+++.++.++|.++.. .+++++|+.+|++++.++|+++.++
T Consensus 3 ~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp ---CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCchhHHHH
Confidence 467889999999999886 58999999999999999999999999999999876 8999999999999999999999999
Q ss_pred HHHHHHHHHcCCccccccc
Q 024536 228 ASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 228 ~~lA~ll~~~G~~~eA~~~ 246 (266)
..+|.++...|++++|++.
T Consensus 81 ~~l~~~~~~~~~~~~A~~~ 99 (137)
T 3q49_B 81 FFLGQCQLEMESYDEAIAN 99 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHH
Confidence 9999999999999999853
No 75
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.50 E-value=2.5e-13 Score=117.65 Aligned_cols=104 Identities=13% Similarity=0.002 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|..+|++++.++|+++.++.++|.++.. .|++++|+.+|
T Consensus 186 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 263 (327)
T 3cv0_A 186 NNYDSAAANLRRAVELRPDDAQLWNKLGATLA-NGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN-MSQYDLAAKQL 263 (327)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hccHHHHHHHH
Confidence 79999999999999999999999999999886 58999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCCHHHHHH-----HHHHHHHcCC
Q 024536 214 DRAVHSAPDDCHVLAS-----YARFLWDAGE 239 (266)
Q Consensus 214 ekAL~l~P~da~a~~~-----lA~ll~~~G~ 239 (266)
++++.++|++...... ...++...+.
T Consensus 264 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 294 (327)
T 3cv0_A 264 VRAIYMQVGGTTPTGEASREATRSMWDFFRM 294 (327)
T ss_dssp HHHHHHHTTSCC-----CCTHHHHHHHHHHH
T ss_pred HHHHHhCCccccccccchhhcCHHHHHHHHH
Confidence 9999999985433221 4455554443
No 76
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.50 E-value=5.2e-14 Score=131.08 Aligned_cols=111 Identities=16% Similarity=0.146 Sum_probs=104.4
Q ss_pred CCHHHHHHHHHHHHH----------------HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIK----------------AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALe----------------l~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ 197 (266)
+++++|+.+|++||+ ++|.++.+|+|+|.++. ..+++++|+.+|++||+++|+++.+++++|.
T Consensus 237 g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 315 (370)
T 1ihg_A 237 QNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKL-KMSDWQGAVDSCLEALEIDPSNTKALYRRAQ 315 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 789999999999999 88889999999999886 6899999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 198 LIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++.. .+++++|+.+|++|++++|++..++..++.++..+++.+++.+.
T Consensus 316 ~~~~-~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 316 GWQG-LKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9877 89999999999999999999999999999999999988887743
No 77
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.50 E-value=1.3e-13 Score=116.40 Aligned_cols=112 Identities=16% Similarity=0.172 Sum_probs=105.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++..+|+++.++.++|.++.. .|++++|+.+|
T Consensus 51 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~ 128 (252)
T 2ho1_A 51 GNTEQAKVPLRKALEIDPSSADAHAALAVVFQ-TEMEPKLADEEYRKALASDSRNARVLNNYGGFLYE-QKRYEEAYQRL 128 (252)
T ss_dssp TCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CChHHHHHHHHHHHhcCCChHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-HhHHHHHHHHH
Confidence 57899999999999999999999999999876 58999999999999999999999999999998876 89999999999
Q ss_pred HHHHH--hCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 214 DRAVH--SAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 214 ekAL~--l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
++++. ..|.++.++..+|.++...|++++|++.-
T Consensus 129 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 164 (252)
T 2ho1_A 129 LEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYF 164 (252)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999 88999999999999999999999999653
No 78
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.50 E-value=1.3e-13 Score=111.21 Aligned_cols=95 Identities=13% Similarity=0.078 Sum_probs=88.6
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 024536 150 YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLAS 229 (266)
Q Consensus 150 ~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~ 229 (266)
++.++.+|+++|.+++ ..|++++|+.+|++||.++|+++.+|+++|.++.. .+++++|+.+|++|++++|+++.++..
T Consensus 7 ~~~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAM-ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp CCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 4567788999998886 58999999999999999999999999999999877 899999999999999999999999999
Q ss_pred HHHHHHHcCCccccccc
Q 024536 230 YARFLWDAGEEEDDDDG 246 (266)
Q Consensus 230 lA~ll~~~G~~~eA~~~ 246 (266)
+|.++...|++++|++.
T Consensus 85 lg~~~~~~g~~~~A~~~ 101 (164)
T 3sz7_A 85 LGLARFDMADYKGAKEA 101 (164)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHccCHHHHHHH
Confidence 99999999999999853
No 79
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.50 E-value=2.1e-13 Score=103.80 Aligned_cols=101 Identities=15% Similarity=0.142 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024536 137 ESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRA 216 (266)
Q Consensus 137 eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekA 216 (266)
++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|++|+.++|+++.+++++|.++.. .|++++|+.+|+++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~~~a 79 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYA-EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-QGDRAGARQAWESG 79 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 36889999999999999999999999886 58999999999999999999999999999999877 79999999999999
Q ss_pred HHhCC--CCHHHHHHHHHHHHHcCC
Q 024536 217 VHSAP--DDCHVLASYARFLWDAGE 239 (266)
Q Consensus 217 L~l~P--~da~a~~~lA~ll~~~G~ 239 (266)
++++| .+..++..+..++...++
T Consensus 80 l~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 80 LAAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHhccccccHHHHHHHHHHHHHhcc
Confidence 99998 456666677666665544
No 80
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.49 E-value=1.8e-13 Score=118.64 Aligned_cols=109 Identities=15% Similarity=0.147 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 024536 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFD 214 (266)
Q Consensus 135 ~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~e 214 (266)
++++|+.+|+++++++|+++.+|.++|.++. ..|++++|+.+|++++.++|++..++..+|.++.. .+++++|+.+|+
T Consensus 106 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~ 183 (330)
T 3hym_B 106 KNEHARRYLSKATTLEKTYGPAWIAYGHSFA-VESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL-TNNSKLAERFFS 183 (330)
T ss_dssp CHHHHHHHHHHHHTTCTTCTHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 4555555555555555555555555555443 34555555555555555555555555555554443 455555555555
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 215 RAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 215 kAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
+++.++|+++.++..+|.++...|++++|++
T Consensus 184 ~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 214 (330)
T 3hym_B 184 QALSIAPEDPFVMHEVGVVAFQNGEWKTAEK 214 (330)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHhCCCChHHHHHHHHHHHHcccHHHHHH
Confidence 5555555555555555555555555555553
No 81
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.49 E-value=9.9e-14 Score=138.38 Aligned_cols=111 Identities=12% Similarity=-0.041 Sum_probs=104.4
Q ss_pred CCCHHHHHHHHHHHH--------HHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 024536 133 GKESESMDVYYQEMI--------KAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHK 204 (266)
Q Consensus 133 ~~~~eeA~~~y~rAL--------el~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~g 204 (266)
.+++++|+++|++++ +.+|+++.+++++|.++. ..|++++|+.+|++|++++|+++.+|+++|.++.. .|
T Consensus 404 ~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g 481 (681)
T 2pzi_A 404 LSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALL-DLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL-TG 481 (681)
T ss_dssp TCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HT
T ss_pred ccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHH-hcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-cC
Confidence 378999999999999 999999999999999886 58999999999999999999999999999999876 79
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 205 DAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 205 d~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++++|+.+|++|++++|+++.++.++|.++...|++++ ++.
T Consensus 482 ~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~ 522 (681)
T 2pzi_A 482 DYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKF 522 (681)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHH
Confidence 99999999999999999999999999999999999999 754
No 82
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.49 E-value=9.6e-14 Score=123.70 Aligned_cols=115 Identities=16% Similarity=0.133 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHH------HcCCH-------HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHH
Q 024536 137 ESMDVYYQEMIKAYPEDALVLANYAKFLKE------IRGDF-------VKAEEYCGRAIL-AKPGDGNVLSMYGDLIWIN 202 (266)
Q Consensus 137 eeA~~~y~rALel~P~~~~al~nlA~~L~~------~~gd~-------e~A~~~~erAL~-ldP~da~al~nla~ll~~~ 202 (266)
++|+..|++||+++|+++.+|+++|.++.. ..|++ ++|...|++||+ ++|++..+|.++|.++..
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~- 111 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES- 111 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh-
Confidence 789999999999999999999999988753 24775 999999999999 799999999999998866
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHcCCccccccccccccc
Q 024536 203 HKDAPRAKSYFDRAVHSAPDDCH-VLASYARFLWDAGEEEDDDDGDDQETC 252 (266)
Q Consensus 203 ~gd~deAi~~~ekAL~l~P~da~-a~~~lA~ll~~~G~~~eA~~~~~~~~~ 252 (266)
.|++++|+.+|++|++++|+++. +|..++.++...|+.++|+++.+..-.
T Consensus 112 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 162 (308)
T 2ond_A 112 RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARE 162 (308)
T ss_dssp TTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 89999999999999999999987 999999999999999999866544333
No 83
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.48 E-value=2.9e-13 Score=115.32 Aligned_cols=109 Identities=16% Similarity=0.124 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH-HHHHHHcCCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG-DLIWINHKDAPRAKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla-~ll~~~~gd~deAi~~ 212 (266)
+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++| .++ . .+++++|+.+
T Consensus 88 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~-~~~~~~A~~~ 164 (272)
T 3u4t_A 88 GQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFY-NKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYY-Y-NKEYVKADSS 164 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHH-H-TTCHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH-H-HHHHHHHHHH
Confidence 68999999999999999999999999999886 589999999999999999999999999999 554 4 5699999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCC---cccccc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGE---EEDDDD 245 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~---~~eA~~ 245 (266)
|+++++++|+++.++..+|.++...++ +++|++
T Consensus 165 ~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~ 200 (272)
T 3u4t_A 165 FVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKP 200 (272)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTTHH
T ss_pred HHHHHHhCccchHHHHHHHHHHHHcCcchhhHHHHH
Confidence 999999999999999999999999998 777774
No 84
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.48 E-value=4.7e-13 Score=99.34 Aligned_cols=95 Identities=11% Similarity=-0.038 Sum_probs=87.0
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHH
Q 024536 153 DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD------CHV 226 (266)
Q Consensus 153 ~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~d------a~a 226 (266)
++.+|.++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++|+.+|++|++++|++ ..+
T Consensus 3 ~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 80 (111)
T 2l6j_A 3 QFEKQKEQGNSLF-KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LGEYTQAIQMCQQGLRYTSTAEHVAIRSKL 80 (111)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTSCSSTTSHHHHHHH
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCccHHHHHHHH
Confidence 4678899998876 58999999999999999999999999999999877 899999999999999999999 899
Q ss_pred HHHHHHHHHHcCCcccccccccc
Q 024536 227 LASYARFLWDAGEEEDDDDGDDQ 249 (266)
Q Consensus 227 ~~~lA~ll~~~G~~~eA~~~~~~ 249 (266)
+..++.++...|+.++|++..+.
T Consensus 81 ~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 81 QYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHHhHhhhHhHHHH
Confidence 99999999999999999976443
No 85
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.48 E-value=1.9e-13 Score=114.39 Aligned_cols=112 Identities=17% Similarity=0.174 Sum_probs=104.2
Q ss_pred CCHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----------------------
Q 024536 134 KESESMDVYYQEMIKAYPED-------ALVLANYAKFLKEIRGDFVKAEEYCGRAIL----------------------- 183 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~-------~~al~nlA~~L~~~~gd~e~A~~~~erAL~----------------------- 183 (266)
+++++|+.+|+++++++|++ +.++.++|.++. ..+++++|..+|++++.
T Consensus 52 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~ 130 (258)
T 3uq3_A 52 GEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYH-KLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEA 130 (258)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHH
Confidence 68999999999999999988 799999999886 68999999999999999
Q ss_pred ---hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 184 ---AKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 184 ---ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
.+|+++.++.++|.++.. .|++++|+.+|++++.++|+++.++..+|.++...|++++|++.-
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 196 (258)
T 3uq3_A 131 EAYVNPEKAEEARLEGKEYFT-KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADC 196 (258)
T ss_dssp HHHCCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCcchHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 778888999999998876 899999999999999999999999999999999999999999643
No 86
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.48 E-value=7.5e-13 Score=118.46 Aligned_cols=110 Identities=8% Similarity=-0.085 Sum_probs=96.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLK-EIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~-~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~ 212 (266)
+++++|+++|+++++.+|++.......+++.. ...+++++|..+|+++++.+|+++.+++++|.++.. .|++++|+.+
T Consensus 144 g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~-~g~~~eA~~~ 222 (291)
T 3mkr_A 144 DRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMA-QGRWEAAEGV 222 (291)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHH
Confidence 68999999999999999999755444333221 124889999999999999999999999999998876 8999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCccccc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~ 244 (266)
|++|++++|+++.++.+++.+++..|+.+++.
T Consensus 223 l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 223 LQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 99999999999999999999999999997753
No 87
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.48 E-value=1.9e-13 Score=107.62 Aligned_cols=93 Identities=12% Similarity=0.118 Sum_probs=84.5
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------H
Q 024536 152 EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD-------C 224 (266)
Q Consensus 152 ~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~d-------a 224 (266)
+.+.++.++|..++ ..|++++|+.+|++||+++|+++.+|.++|.++.. .|++++|+.+|++||+++|++ +
T Consensus 6 d~A~a~~~lG~~~~-~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 6 DAAIAEKDLGNAAY-KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 34678899999887 58999999999999999999999999999999877 899999999999999999976 3
Q ss_pred HHHHHHHHHHHHcCCccccccc
Q 024536 225 HVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 225 ~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
.++.++|.++..++++++|++.
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~ 105 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQW 105 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHH
Confidence 5788999999999999999964
No 88
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.47 E-value=1.8e-13 Score=117.91 Aligned_cols=114 Identities=13% Similarity=-0.007 Sum_probs=102.4
Q ss_pred CCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHH-----
Q 024536 134 KESESMDVYYQEMIKAYPED---ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD---GNVLSMYGDLIWIN----- 202 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~---~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d---a~al~nla~ll~~~----- 202 (266)
+++++|+.+|+++++.+|++ +.+++++|.+++ ..|++++|+.+|++++.+.|++ +.+++++|.+++..
T Consensus 29 g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~ 107 (261)
T 3qky_A 29 GKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYY-QNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYE 107 (261)
T ss_dssp TCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTT
T ss_pred CCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccccc
Confidence 68999999999999999999 899999999887 5899999999999999998855 67899999887541
Q ss_pred --cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCccccccccc
Q 024536 203 --HKDAPRAKSYFDRAVHSAPDDCHVL-----------------ASYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 203 --~gd~deAi~~~ekAL~l~P~da~a~-----------------~~lA~ll~~~G~~~eA~~~~~ 248 (266)
.|++++|+.+|++++...|++..+. ..+|.++...|++++|++.-+
T Consensus 108 ~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 172 (261)
T 3qky_A 108 LDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYE 172 (261)
T ss_dssp SCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 6899999999999999999987766 788999999999999996543
No 89
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.47 E-value=2.8e-13 Score=118.20 Aligned_cols=112 Identities=13% Similarity=0.067 Sum_probs=104.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|++++.++|+++.++..+|.++.. .|++++|+.+|
T Consensus 17 g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 94 (359)
T 3ieg_A 17 GQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLK-QGKLDEAEDDF 94 (359)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHH-cCChHHHHHHH
Confidence 68999999999999999999999999999886 58999999999999999999999999999999877 79999999999
Q ss_pred HHHHHhCC---CCHHHHHHH------------HHHHHHcCCcccccccc
Q 024536 214 DRAVHSAP---DDCHVLASY------------ARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 214 ekAL~l~P---~da~a~~~l------------A~ll~~~G~~~eA~~~~ 247 (266)
++++.++| ++..++..+ |.++...|++++|++.-
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 143 (359)
T 3ieg_A 95 KKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFL 143 (359)
T ss_dssp HHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHH
Confidence 99999999 899888877 78999999999999653
No 90
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.46 E-value=1.3e-14 Score=132.44 Aligned_cols=112 Identities=8% Similarity=-0.075 Sum_probs=105.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD---------------GNVLSMYGDL 198 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d---------------a~al~nla~l 198 (266)
.++++|+.+|+++++.+|+++.++.++|.+++ ..|++++|+.+|++||.++|++ +.++.++|.+
T Consensus 127 ~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 205 (336)
T 1p5q_A 127 KSFEKAKESWEMNSEEKLEQSTIVKERGTVYF-KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMC 205 (336)
T ss_dssp EEEECCCCGGGCCHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eecccccchhcCCHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999887 5899999999999999999999 6999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 199 IWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 199 l~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
+.. .+++++|+.+|++|++++|+++.+++++|.++..+|++++|++..
T Consensus 206 ~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~ 253 (336)
T 1p5q_A 206 HLK-LQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADF 253 (336)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 877 899999999999999999999999999999999999999999643
No 91
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.45 E-value=9.2e-13 Score=96.64 Aligned_cols=89 Identities=13% Similarity=0.028 Sum_probs=83.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHc-CCHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG--DGNVLSMYGDLIWINH-KDAPRAK 210 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~--da~al~nla~ll~~~~-gd~deAi 210 (266)
+++++|+.+|+++++++|.++.++.++|.++. ..+++++|+.+|+++++++|+ ++.++.++|.++.. . +++++|+
T Consensus 20 ~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~A~ 97 (112)
T 2kck_A 20 GNYTESIDLFEKAIQLDPEESKYWLMKGKALY-NLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY-IEGKEVEAE 97 (112)
T ss_dssp CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT-CSSCSHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-HhCCHHHHH
Confidence 68999999999999999999999999999886 589999999999999999999 99999999998866 8 9999999
Q ss_pred HHHHHHHHhCCCCH
Q 024536 211 SYFDRAVHSAPDDC 224 (266)
Q Consensus 211 ~~~ekAL~l~P~da 224 (266)
.+|++++...|.++
T Consensus 98 ~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 98 IAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHHGGGCCCCC
T ss_pred HHHHHHhhcccCCC
Confidence 99999999999763
No 92
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.45 E-value=2.3e-13 Score=111.47 Aligned_cols=111 Identities=11% Similarity=-0.010 Sum_probs=96.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+| ++.++..++.+......+..+|+.+|+++++++|+++.+++++|.++.. .|++++|+.+|
T Consensus 54 g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~-~g~~~~A~~~~ 131 (176)
T 2r5s_A 54 KQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQ-VGRDEEALELL 131 (176)
T ss_dssp TCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cccHHHHHHHH
Confidence 689999999999999999 8887777665433222334568999999999999999999999999876 89999999999
Q ss_pred HHHHHhCCCC--HHHHHHHHHHHHHcCCccccccc
Q 024536 214 DRAVHSAPDD--CHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 214 ekAL~l~P~d--a~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+++++++|+. +.++..++.++...|+.++|+..
T Consensus 132 ~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~ 166 (176)
T 2r5s_A 132 WNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK 166 (176)
T ss_dssp HHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH
Confidence 9999999975 66999999999999999998854
No 93
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.45 E-value=1.3e-13 Score=116.60 Aligned_cols=113 Identities=9% Similarity=0.120 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-cCCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN-HKDAPRAKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~-~gd~deAi~~ 212 (266)
+++++|+.+|+++++++|+++.+|+++|.++. ..|++++|+.+|++||+++|+++.+++++|.+++.. ..+.++|+..
T Consensus 68 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~ 146 (208)
T 3urz_A 68 RNYDKAYLFYKELLQKAPNNVDCLEACAEMQV-CRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETD 146 (208)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 68999999999999999999999999999886 589999999999999999999999999999887542 1234556666
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCccccccccc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~ 248 (266)
|++++..+|. ..+++.+|..+...+++++|++..+
T Consensus 147 ~~~~~~~~~~-~~a~~~~g~~~~~~~~~~~A~~~~~ 181 (208)
T 3urz_A 147 YKKLSSPTKM-QYARYRDGLSKLFTTRYEKARNSLQ 181 (208)
T ss_dssp HC---CCCHH-HHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHhCCCch-hHHHHHHHHHHHHccCHHHHHHHHH
Confidence 6666543322 2345566667777777777775433
No 94
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.44 E-value=1.1e-12 Score=106.43 Aligned_cols=93 Identities=10% Similarity=0.137 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDF--VKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~--e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~ 211 (266)
+++++|+.+|+++++++|+++.++.++|.+++...+++ ++|+.+|+++++++|+++.+++++|.++.. .|++++|+.
T Consensus 58 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~ 136 (177)
T 2e2e_A 58 NDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFM-QANYAQAIE 136 (177)
T ss_dssp TCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cccHHHHHH
Confidence 58999999999999999999999999999844467998 999999999999999999999999998877 899999999
Q ss_pred HHHHHHHhCCCCHHHH
Q 024536 212 YFDRAVHSAPDDCHVL 227 (266)
Q Consensus 212 ~~ekAL~l~P~da~a~ 227 (266)
+|++++.++|++....
T Consensus 137 ~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 137 LWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHHHHHHTCCTTSCHH
T ss_pred HHHHHHhhCCCCccHH
Confidence 9999999999986554
No 95
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.44 E-value=2.4e-13 Score=106.26 Aligned_cols=91 Identities=11% Similarity=-0.069 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 024536 156 VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLW 235 (266)
Q Consensus 156 al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~ 235 (266)
.++++|..+. ..|++++|+.+|++|++++|+++.+|+++|.++.. .|++++|+.+|++|++++|+++.++..+|.++.
T Consensus 19 ~~~~~g~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 19 NPMEEGLSML-KLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE-NEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp CHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3567777765 58999999999999999999999999999999876 899999999999999999999999999999999
Q ss_pred HcCCccccccccc
Q 024536 236 DAGEEEDDDDGDD 248 (266)
Q Consensus 236 ~~G~~~eA~~~~~ 248 (266)
..|++++|++.-+
T Consensus 97 ~~g~~~~A~~~~~ 109 (121)
T 1hxi_A 97 NEHNANAALASLR 109 (121)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHH
Confidence 9999999996533
No 96
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.44 E-value=8.7e-13 Score=115.09 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=90.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHH------------HHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKP---GDGNVLSMY------------GDL 198 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP---~da~al~nl------------a~l 198 (266)
+++++|+.+|+++++++|+++.++..+|.++. ..|++++|..+|++++.++| +++.++..+ |.+
T Consensus 51 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ 129 (359)
T 3ieg_A 51 GKSKAALPDLTKVIALKMDFTAARLQRGHLLL-KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALD 129 (359)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH-HcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888888888888888888888888888775 57888888888888888888 788877776 455
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 199 IWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 199 l~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+.. .|++++|+.+|++++..+|+++.++..+|.++...|++++|++.
T Consensus 130 ~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 176 (359)
T 3ieg_A 130 AFD-GADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISD 176 (359)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHH-ccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHH
Confidence 544 78888888888888888888888888888888888888888854
No 97
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.43 E-value=1.9e-12 Score=92.85 Aligned_cols=85 Identities=19% Similarity=0.302 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 024536 152 EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYA 231 (266)
Q Consensus 152 ~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA 231 (266)
.++.+++++|.++. ..+++++|+.+|++|+.++|+++.++.++|.++.. .+++++|+.+|+++++++|+++.++.+++
T Consensus 7 ~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~l~ 84 (91)
T 1na3_A 7 NSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAKQNLG 84 (91)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 46788999998876 58999999999999999999999999999998876 89999999999999999999999999999
Q ss_pred HHHHHcC
Q 024536 232 RFLWDAG 238 (266)
Q Consensus 232 ~ll~~~G 238 (266)
.++...|
T Consensus 85 ~~~~~~g 91 (91)
T 1na3_A 85 NAKQKQG 91 (91)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9987754
No 98
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.43 E-value=5.5e-13 Score=118.75 Aligned_cols=115 Identities=15% Similarity=0.132 Sum_probs=87.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDAL-VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~-al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~ 212 (266)
+++++|++.|+++++++|.++. +|.+++.++. ..|++++|..+|++|++.+|.+..+|..++.+.+...|++++|+.+
T Consensus 113 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~ 191 (308)
T 2ond_A 113 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKI 191 (308)
T ss_dssp TCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH-HHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccccCccHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4678888888888888887775 7888877665 4577777777777777777777777665554433335788888888
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccccc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDDQ 249 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~~ 249 (266)
|++|++++|+++.+|..++.++...|+.++|.+..+.
T Consensus 192 ~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 228 (308)
T 2ond_A 192 FELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFER 228 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 8888888888888888888888888888888865443
No 99
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.42 E-value=1.4e-12 Score=121.50 Aligned_cols=111 Identities=16% Similarity=0.204 Sum_probs=101.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++.++|+++.++.++|.++.. .|++++|+.+|
T Consensus 290 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~ 367 (537)
T 3fp2_A 290 ENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYF-ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK-QGKFTESEAFF 367 (537)
T ss_dssp SCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 67899999999999999999999999998876 58999999999999999999999999999988876 79999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+++++++|+++.++..+|.++...|++++|++.
T Consensus 368 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 400 (537)
T 3fp2_A 368 NETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQ 400 (537)
T ss_dssp HHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHH
Confidence 999999999999999999999999999999854
No 100
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.42 E-value=1.9e-13 Score=125.04 Aligned_cols=110 Identities=16% Similarity=0.103 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCH-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDA-----------------LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~-----------------~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla 196 (266)
+++++|+.+|++|++++|++. .+|+|+|.++. ..+++++|+.+|++||+++|+++.+|+++|
T Consensus 193 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 271 (338)
T 2if4_A 193 EKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLI-KLKRYDEAIGHCNIVLTEEEKNPKALFRRG 271 (338)
T ss_dssp SCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 789999999999999999988 48999999876 589999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCcccccc
Q 024536 197 DLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDA-GEEEDDDD 245 (266)
Q Consensus 197 ~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~-G~~~eA~~ 245 (266)
.++.. .+++++|+.+|++|++++|+++.++..++.+.... +..+.+.+
T Consensus 272 ~a~~~-~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~ 320 (338)
T 2if4_A 272 KAKAE-LGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKE 320 (338)
T ss_dssp HHHHT-TTCHHHHHHHHHHTTC----------------------------
T ss_pred HHHHH-cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99876 89999999999999999999999999999885544 34444443
No 101
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.41 E-value=7.4e-13 Score=117.61 Aligned_cols=88 Identities=17% Similarity=0.087 Sum_probs=83.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|++|++++|+++.+++++|.++. ..|++++|+.+|++|++++|+++.+++++|.++.. .|++++|+.+|
T Consensus 18 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 95 (281)
T 2c2l_A 18 RKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYDEAIANL 95 (281)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999999886 68999999999999999999999999999999876 89999999999
Q ss_pred HHHHHhCCCC
Q 024536 214 DRAVHSAPDD 223 (266)
Q Consensus 214 ekAL~l~P~d 223 (266)
++|++++|++
T Consensus 96 ~~al~l~p~~ 105 (281)
T 2c2l_A 96 QRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHhCccc
Confidence 9999999976
No 102
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.41 E-value=1.6e-12 Score=123.24 Aligned_cols=111 Identities=14% Similarity=0.047 Sum_probs=75.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCC-HHHHHHHHHHHHHHcCCH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGD-GNVLSMYGDLIWINHKDA 206 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l------dP~d-a~al~nla~ll~~~~gd~ 206 (266)
+++++|+++|+++++.+|+++.+|++++.++. ..|++++|+.+|++++++ +|++ ..+|..++.++.. .|++
T Consensus 455 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~-~g~~ 532 (597)
T 2xpi_A 455 GNILLANEYLQSSYALFQYDPLLLNELGVVAF-NKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRK-LKMY 532 (597)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHH-TTCH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH-hcCH
Confidence 46667777777777777777777777766654 466777777777777766 5554 5666667766655 6677
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 207 PRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 207 deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++|+.+|+++++++|+++.++..++.++...|++++|++.
T Consensus 533 ~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 572 (597)
T 2xpi_A 533 DAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITH 572 (597)
T ss_dssp HHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHH
Confidence 7777777777777777777777777777777777777654
No 103
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.41 E-value=1.4e-12 Score=118.90 Aligned_cols=113 Identities=13% Similarity=0.088 Sum_probs=103.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|++++|+.+|
T Consensus 40 g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 117 (450)
T 2y4t_A 40 GQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLK-QGKLDEAEDDF 117 (450)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 68999999999999999999999999999886 58999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCCH---HHHHHH------------HHHHHHcCCccccccccc
Q 024536 214 DRAVHSAPDDC---HVLASY------------ARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 214 ekAL~l~P~da---~a~~~l------------A~ll~~~G~~~eA~~~~~ 248 (266)
++++.++|++. .++..+ |.++...|++++|++..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 167 (450)
T 2y4t_A 118 KKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLD 167 (450)
T ss_dssp HHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99999999998 776655 666999999999986543
No 104
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.40 E-value=1.1e-12 Score=111.64 Aligned_cols=113 Identities=7% Similarity=-0.031 Sum_probs=98.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH---HHHHHHHHHHHH-----------------cCCHHHHHHHHHHHHHhCCCCHHHH-
Q 024536 134 KESESMDVYYQEMIKAYPEDAL---VLANYAKFLKEI-----------------RGDFVKAEEYCGRAILAKPGDGNVL- 192 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~---al~nlA~~L~~~-----------------~gd~e~A~~~~erAL~ldP~da~al- 192 (266)
+++++|+..|+++++.+|+++. +++++|.++... .+++++|+..|+++|+..|+++.++
T Consensus 55 ~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~ 134 (225)
T 2yhc_A 55 ADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTD 134 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHH
T ss_pred CCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHH
Confidence 6899999999999999999974 788888876531 4689999999999999999998665
Q ss_pred ----------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCcccccccc
Q 024536 193 ----------------SMYGDLIWINHKDAPRAKSYFDRAVHSAPDDC---HVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 193 ----------------~nla~ll~~~~gd~deAi~~~ekAL~l~P~da---~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
..+|.+++. +|++++|+..|+++++..|+++ .++..+|.++..+|+.++|++..
T Consensus 135 a~~~l~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~ 207 (225)
T 2yhc_A 135 ATKRLVFLKDRLAKYEYSVAEYYTE-RGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVA 207 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 467777766 7999999999999999999987 67999999999999999999543
No 105
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.40 E-value=5.7e-13 Score=114.80 Aligned_cols=112 Identities=18% Similarity=0.001 Sum_probs=99.0
Q ss_pred CCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHhCCCCHHHH----------
Q 024536 134 KESESMDVYYQEMIKAYPED---ALVLANYAKFLKEI--------RGDFVKAEEYCGRAILAKPGDGNVL---------- 192 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~---~~al~nlA~~L~~~--------~gd~e~A~~~~erAL~ldP~da~al---------- 192 (266)
+++++|+.+|+++++.+|++ +.+++++|.++. . .|++++|+.+|++++..+|+++.+.
T Consensus 66 ~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~ 144 (261)
T 3qky_A 66 KEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY-KLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELR 144 (261)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH-HHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHH-HhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHH
Confidence 68999999999999998865 578999998876 5 7999999999999999999997766
Q ss_pred -------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHc----------CCcccccccc
Q 024536 193 -------SMYGDLIWINHKDAPRAKSYFDRAVHSAPD---DCHVLASYARFLWDA----------GEEEDDDDGD 247 (266)
Q Consensus 193 -------~nla~ll~~~~gd~deAi~~~ekAL~l~P~---da~a~~~lA~ll~~~----------G~~~eA~~~~ 247 (266)
+++|.++.. .|++++|+.+|+++++..|+ .+.++..+|.++... |++++|++.-
T Consensus 145 ~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~ 218 (261)
T 3qky_A 145 AKLARKQYEAARLYER-RELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELY 218 (261)
T ss_dssp HHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHH
Confidence 788998876 89999999999999999998 466899999999987 7778888543
No 106
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.40 E-value=1.2e-12 Score=99.08 Aligned_cols=96 Identities=18% Similarity=0.072 Sum_probs=88.9
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 024536 150 YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLAS 229 (266)
Q Consensus 150 ~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~ 229 (266)
.|.++.+|+++|..+. ..+++++|+.+|++++..+|+++.++.++|.++.. .+++++|+.+|+++++++|+++.++..
T Consensus 12 ~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 12 NPDLALMVKNKGNECF-QKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTK-LLEFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp SSCHHHHHHHHHHHHH-HTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTT-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCchHHHHH
Confidence 4677889999998876 58999999999999999999999999999998866 899999999999999999999999999
Q ss_pred HHHHHHHcCCcccccccc
Q 024536 230 YARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 230 lA~ll~~~G~~~eA~~~~ 247 (266)
+|.++...|++++|++..
T Consensus 90 la~~~~~~~~~~~A~~~~ 107 (133)
T 2lni_A 90 KAAALEAMKDYTKAMDVY 107 (133)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHH
Confidence 999999999999999643
No 107
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.40 E-value=3.5e-12 Score=116.37 Aligned_cols=114 Identities=13% Similarity=0.090 Sum_probs=102.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHH------------HHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANY------------AKFLKEIRGDFVKAEEYCGRAILAKPGDGN----VLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nl------------A~~L~~~~gd~e~A~~~~erAL~ldP~da~----al~nla~ 197 (266)
+++++|+.+|+++++++|+++.++..+ |.++. ..|++++|..+|++++.++|+++. ++.++|.
T Consensus 225 g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~ 303 (450)
T 2y4t_A 225 GDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELI-RDGRYTDATSKYESVMKTEPSIAEYTVRSKERICH 303 (450)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 689999999999999999999988777 77665 579999999999999999999954 7888898
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccccc
Q 024536 198 LIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDDQ 249 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~~ 249 (266)
++.. .|++++|+.+|++++.++|+++.++..+|.++...|++++|++.-+.
T Consensus 304 ~~~~-~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 354 (450)
T 2y4t_A 304 CFSK-DEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYET 354 (450)
T ss_dssp HHHT-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHH-CCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 8866 79999999999999999999999999999999999999999965433
No 108
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.39 E-value=3.3e-12 Score=121.01 Aligned_cols=111 Identities=12% Similarity=0.066 Sum_probs=79.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++++|++..+|++++.++. ..|++++|+++|++++..+|+++.++..++.++.. .|++++|+.+|
T Consensus 387 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 464 (597)
T 2xpi_A 387 NKISEARRYFSKSSTMDPQFGPAWIGFAHSFA-IEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ-LGNILLANEYL 464 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 56777777777777777777777777776654 46777777777777777777777777777766655 57777777777
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+++++++|+++.++..++.++...|++++|++.
T Consensus 465 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 497 (597)
T 2xpi_A 465 QSSYALFQYDPLLLNELGVVAFNKSDMQTAINH 497 (597)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHH
Confidence 777777777777777777777777777777754
No 109
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.39 E-value=9.2e-13 Score=112.15 Aligned_cols=114 Identities=18% Similarity=0.091 Sum_probs=100.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHH-----
Q 024536 134 KESESMDVYYQEMIKAYPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN---VLSMYGDLIWIN----- 202 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~---~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~---al~nla~ll~~~----- 202 (266)
+++++|+.+|+++++.+|+++ .+++++|.+++ ..|++++|+..|+++++.+|+++. +++.+|.++...
T Consensus 18 g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~ 96 (225)
T 2yhc_A 18 GNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYY-KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSAL 96 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhh
Confidence 689999999999999999874 78999999887 589999999999999999999875 788899887642
Q ss_pred ------------cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCccccccccc
Q 024536 203 ------------HKDAPRAKSYFDRAVHSAPDDCHVL-----------------ASYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 203 ------------~gd~deAi~~~ekAL~l~P~da~a~-----------------~~lA~ll~~~G~~~eA~~~~~ 248 (266)
.+++++|+.+|+++++..|+++.++ ..+|.++...|++++|++.-+
T Consensus 97 ~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 171 (225)
T 2yhc_A 97 QGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVE 171 (225)
T ss_dssp -----------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 4689999999999999999998654 577889999999999996533
No 110
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.38 E-value=3.4e-12 Score=94.17 Aligned_cols=94 Identities=16% Similarity=-0.019 Sum_probs=86.3
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 024536 153 DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYAR 232 (266)
Q Consensus 153 ~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ 232 (266)
.+.+++.+|..+. ..+++++|..+|++++..+|+++.++.++|.++.. .+++++|+.+|++++.++|+++.++..+|.
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 80 (118)
T 1elw_A 3 QVNELKEKGNKAL-SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK-KGDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80 (118)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4567888898776 58999999999999999999999999999998877 799999999999999999999999999999
Q ss_pred HHHHcCCccccccccc
Q 024536 233 FLWDAGEEEDDDDGDD 248 (266)
Q Consensus 233 ll~~~G~~~eA~~~~~ 248 (266)
++...|++++|.+.-+
T Consensus 81 ~~~~~~~~~~A~~~~~ 96 (118)
T 1elw_A 81 ALEFLNRFEEAKRTYE 96 (118)
T ss_dssp HHHHTTCHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHH
Confidence 9999999999996543
No 111
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.38 E-value=8e-12 Score=103.23 Aligned_cols=101 Identities=12% Similarity=-0.006 Sum_probs=89.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG----------------NVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da----------------~al~nla~ 197 (266)
+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|++|+.+.|.+. .+++++|.
T Consensus 51 g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (213)
T 1hh8_A 51 KNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY-QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAF 129 (213)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHH
Confidence 68999999999999999999999999999886 58999999999999999888877 99999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 024536 198 LIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWD 236 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~ 236 (266)
++.. .|++++|+.+|++|++++|++.......+.....
T Consensus 130 ~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~ 167 (213)
T 1hh8_A 130 MYAK-KEEWKKAEEQLALATSMKSEPRHSKIDKAMECVW 167 (213)
T ss_dssp HHHH-TTCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHHH
T ss_pred HHHH-ccCHHHHHHHHHHHHHcCcccccchHHHHHHHHH
Confidence 9877 8999999999999999999876555555544443
No 112
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.38 E-value=1.2e-12 Score=116.01 Aligned_cols=112 Identities=13% Similarity=0.035 Sum_probs=90.3
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIR-GDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIW 200 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~------~~al~nlA~~L~~~~-gd~e~A~~~~erAL~ldP~d------a~al~nla~ll~ 200 (266)
+++++|+.+|++|+++.|.. +.++.++|.++. .. |++++|+.+|++|+++.|.+ +.++.++|.++.
T Consensus 91 g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~ 169 (292)
T 1qqe_A 91 GNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE-NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKA 169 (292)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 57888999999998888754 467888888765 45 88999999999999888765 567888888886
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHHHcCCcccccccc
Q 024536 201 INHKDAPRAKSYFDRAVHSAPDDCH-------VLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 201 ~~~gd~deAi~~~ekAL~l~P~da~-------a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
. .|++++|+.+|++++++.|++.. ++.++|.++..+|++++|++.-
T Consensus 170 ~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 222 (292)
T 1qqe_A 170 L-DGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTL 222 (292)
T ss_dssp H-TTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred H-hCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 6 78899999999999998887653 5678888888889988888543
No 113
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.38 E-value=3.9e-12 Score=94.46 Aligned_cols=97 Identities=18% Similarity=0.297 Sum_probs=86.6
Q ss_pred HCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 024536 149 AYPED-ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVL 227 (266)
Q Consensus 149 l~P~~-~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~ 227 (266)
.+|.+ +.+++++|.++. ..+++++|+.+|++++..+|+++.++..+|.++.. .+++++|+.+|++++.++|+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~ 80 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAW 80 (125)
T ss_dssp ----CHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCCccHHHH
Confidence 46666 788999998776 58999999999999999999999999999998876 8999999999999999999999999
Q ss_pred HHHHHHHHHcCCcccccccc
Q 024536 228 ASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 228 ~~lA~ll~~~G~~~eA~~~~ 247 (266)
..+|.++...|++++|++..
T Consensus 81 ~~la~~~~~~~~~~~A~~~~ 100 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYY 100 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHH
Confidence 99999999999999999653
No 114
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.37 E-value=1.3e-12 Score=97.87 Aligned_cols=98 Identities=13% Similarity=0.038 Sum_probs=89.5
Q ss_pred HHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 024536 148 KAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVL 227 (266)
Q Consensus 148 el~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~ 227 (266)
+.+|.++.++..+|..+. ..+++++|..+|++++..+|+++.++.++|.++.. .+++++|+.+|++++.++|+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~ 83 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQM-KVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSK-LGNYAGAVQDCERAICIDPAYSKAY 83 (131)
T ss_dssp -CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hcchhhhHHHHHHHHHHH-HccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hhchHHHHHHHHHHHhcCccCHHHH
Confidence 345677888999998876 58999999999999999999999999999998876 8999999999999999999999999
Q ss_pred HHHHHHHHHcCCcccccccc
Q 024536 228 ASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 228 ~~lA~ll~~~G~~~eA~~~~ 247 (266)
..+|.++...|++++|++.-
T Consensus 84 ~~~~~~~~~~~~~~~A~~~~ 103 (131)
T 2vyi_A 84 GRMGLALSSLNKHVEAVAYY 103 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999653
No 115
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.37 E-value=1.1e-13 Score=131.68 Aligned_cols=113 Identities=12% Similarity=0.014 Sum_probs=105.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD---------------GNVLSMYGDL 198 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d---------------a~al~nla~l 198 (266)
.++++|+.+|+++++.+|+++.+|.++|.+++ ..+++++|+.+|++||.++|++ ..+|+++|.+
T Consensus 248 ~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 326 (457)
T 1kt0_A 248 KSFEKAKESWEMDTKEKLEQAAIVKEKGTVYF-KGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMC 326 (457)
T ss_dssp EEEECCCCGGGSCHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCcchhhcCHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 46778999999999999999999999999887 5899999999999999999999 7999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccccc
Q 024536 199 IWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 199 l~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~ 248 (266)
++. .+++++|+.+|++||+++|+++.+++++|.+|..++++++|++..+
T Consensus 327 ~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~ 375 (457)
T 1kt0_A 327 YLK-LREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFE 375 (457)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHH-hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 877 8999999999999999999999999999999999999999996543
No 116
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.37 E-value=8.9e-12 Score=111.47 Aligned_cols=105 Identities=14% Similarity=0.113 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH-HHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPR-AKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~de-Ai~~ 212 (266)
+++++|+.+|+++++.+|+++.+|+++|.++. ..|++++|+.+|++||+++|+++.++.+++.++.. .|+.++ |..+
T Consensus 180 ~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~-~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~-~g~~~eaa~~~ 257 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADKCSPTLLLLNGQAACHM-AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQH-LGKPPEVTNRY 257 (291)
T ss_dssp THHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence 68999999999999999999999999999876 68999999999999999999999999999988877 677765 6799
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCccccc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~ 244 (266)
++++++++|+++.+.. +......++++.
T Consensus 258 ~~~~~~~~P~~~~~~d----~~~~~~~fd~~~ 285 (291)
T 3mkr_A 258 LSQLKDAHRSHPFIKE----YRAKENDFDRLV 285 (291)
T ss_dssp HHHHHHHCTTCHHHHH----HHHHHHHHHHHH
T ss_pred HHHHHHhCCCChHHHH----HHHHHHHHHHHH
Confidence 9999999999998763 333444444443
No 117
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.36 E-value=9.6e-13 Score=111.02 Aligned_cols=111 Identities=21% Similarity=0.281 Sum_probs=100.6
Q ss_pred CCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA--------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--------KPGDGNVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel--------~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l--------dP~da~al~nla~ 197 (266)
+++++|+.+|++++++ +|..+.++.++|.++. ..|++++|+.+|++|+.+ +|....++.++|.
T Consensus 57 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 135 (283)
T 3edt_B 57 NKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLAL 135 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 6899999999999998 4666789999999876 589999999999999998 5777899999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 198 LIWINHKDAPRAKSYFDRAVHS--------APDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l--------~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++.. .|++++|+.+|++++++ .|..+.++..+|.++...|++++|++.
T Consensus 136 ~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 191 (283)
T 3edt_B 136 LCQN-QGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETL 191 (283)
T ss_dssp HHHT-TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 8876 89999999999999999 788888999999999999999999953
No 118
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=2.5e-12 Score=99.32 Aligned_cols=99 Identities=13% Similarity=-0.011 Sum_probs=91.0
Q ss_pred HHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 024536 147 IKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD---GNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (266)
Q Consensus 147 Lel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d---a~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~d 223 (266)
+..+|.++..++.+|..+. ..+++++|+.+|++++.++|++ ..++.++|.++.. .+++++|+.+|++++.++|++
T Consensus 21 ~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 21 ATPGASSVEQLRKEGNELF-KCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEKDGGD 98 (148)
T ss_dssp CCTTCCCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTSCC
T ss_pred CccchHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhCccC
Confidence 3457889999999998876 5899999999999999999998 8999999998876 899999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCcccccccc
Q 024536 224 CHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 224 a~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
+.++..+|.++...|++++|++.-
T Consensus 99 ~~~~~~~a~~~~~~~~~~~A~~~~ 122 (148)
T 2dba_A 99 VKALYRRSQALEKLGRLDQAVLDL 122 (148)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999653
No 119
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.35 E-value=2.6e-12 Score=119.64 Aligned_cols=111 Identities=18% Similarity=0.163 Sum_probs=104.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|+ +.++.++|.++. ..|++++|..+|++++..+|+++.++..+|.++.. .|++++|+.+|
T Consensus 257 ~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 333 (537)
T 3fp2_A 257 NNLLDAQVLLQESINLHPT-PNSYIFLALTLA-DKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFI-LQDYKNAKEDF 333 (537)
T ss_dssp TCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTC-CSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCC-chHHHHHHHHHH-HhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh-cCCHHHHHHHH
Confidence 5889999999999999999 999999999875 57999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
++++.++|+++.++..+|.++...|++++|++.-
T Consensus 334 ~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 367 (537)
T 3fp2_A 334 QKAQSLNPENVYPYIQLACLLYKQGKFTESEAFF 367 (537)
T ss_dssp HHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999999999999653
No 120
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.35 E-value=1.1e-12 Score=116.33 Aligned_cols=114 Identities=16% Similarity=0.067 Sum_probs=98.7
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~------~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d------a~al~nla~ll~~ 201 (266)
+++++|+.+|++|+++.+.. +.++.++|.++. ..|++++|+.+|++|+.+.|.. +.++.++|.++..
T Consensus 51 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~ 129 (292)
T 1qqe_A 51 KELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFK-SGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEN 129 (292)
T ss_dssp TCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 68899999999999996432 678999999876 5899999999999999998754 5689999998865
Q ss_pred Hc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCcccccccccc
Q 024536 202 NH-KDAPRAKSYFDRAVHSAPDD------CHVLASYARFLWDAGEEEDDDDGDDQ 249 (266)
Q Consensus 202 ~~-gd~deAi~~~ekAL~l~P~d------a~a~~~lA~ll~~~G~~~eA~~~~~~ 249 (266)
. |++++|+.+|++|+++.|.+ +.++.++|.++..+|++++|++..+.
T Consensus 130 -~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 183 (292)
T 1qqe_A 130 -DLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSK 183 (292)
T ss_dssp -TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -hhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 5 99999999999999999865 56788999999999999999965443
No 121
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.34 E-value=3.5e-13 Score=111.92 Aligned_cols=114 Identities=10% Similarity=-0.059 Sum_probs=100.5
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHH
Q 024536 132 SGKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG----------------NVLSMY 195 (266)
Q Consensus 132 ~~~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da----------------~al~nl 195 (266)
..+++++|.+.|....+..+..+..+.++|..++ ..+++++|+.+|++|+.+.|.++ .++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (198)
T 2fbn_A 16 NLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFF-KKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNL 94 (198)
T ss_dssp ------CCCSGGGCCHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccCchhhCCHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHH
Confidence 3468888888998888888889999999999886 58999999999999999999998 899999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 196 GDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 196 a~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
|.++.. .+++++|+.+|++|+.++|+++.++..+|.++...|++++|++..
T Consensus 95 a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~ 145 (198)
T 2fbn_A 95 ATCYNK-NKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENL 145 (198)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHH-hcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHH
Confidence 998876 899999999999999999999999999999999999999998643
No 122
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.34 E-value=5.5e-12 Score=106.09 Aligned_cols=91 Identities=19% Similarity=0.140 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--
Q 024536 154 ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG-------DGN-----VLSMYGDLIWINHKDAPRAKSYFDRAVHS-- 219 (266)
Q Consensus 154 ~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~-------da~-----al~nla~ll~~~~gd~deAi~~~ekAL~l-- 219 (266)
+..+.+.|..+. ..|+|++|+.+|++||+++|+ +.. +|.|+|.++.. .|++++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~-~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 11 AYLALSDAQRQL-VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhh
Confidence 567788888876 579999999999999999999 544 99999999877 79999999999999999
Q ss_pred -----CCCCHHHH----HHHHHHHHHcCCccccccc
Q 024536 220 -----APDDCHVL----ASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 220 -----~P~da~a~----~~lA~ll~~~G~~~eA~~~ 246 (266)
+|+++.+| ++.|.+|..+|++++|++.
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~ 124 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPE 124 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHH
Confidence 99999999 9999999999999999953
No 123
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.32 E-value=2.8e-12 Score=118.18 Aligned_cols=114 Identities=15% Similarity=0.151 Sum_probs=97.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLK--EIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWI---NHKDAPR 208 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~--~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~---~~gd~de 208 (266)
+++++|+.+|++|++++|+++.++.+++.+++ ...++.++|+.+|++|++++|+++.++.++|..+.. ..+++++
T Consensus 152 ~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~ 231 (472)
T 4g1t_A 152 NQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGE 231 (472)
T ss_dssp THHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHH
Confidence 57999999999999999999999999998753 235778899999999999999999999998876543 2467899
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 209 AKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 209 Ai~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
|+.+|++|+.++|+++.++.++|.++...|++++|++.-
T Consensus 232 a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~ 270 (472)
T 4g1t_A 232 GEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELL 270 (472)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 999999999999999999999999999999999998643
No 124
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.32 E-value=1.2e-11 Score=93.07 Aligned_cols=90 Identities=13% Similarity=0.037 Sum_probs=76.9
Q ss_pred HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHH
Q 024536 149 AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAP--DDCHV 226 (266)
Q Consensus 149 l~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P--~da~a 226 (266)
.+|+++.+|+++|.++. ..|++++|+.+|++|++++|+++.+|+++|.++.. .|++++|+.+|++|+++.| .+..+
T Consensus 2 ~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~~~~~~~~~ 79 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHL-KHDNASRALALFEELVETDPDYVGTYYHLGKLYER-LDRTDDAIDTYAQGIEVAREEGTQKD 79 (100)
T ss_dssp ---CCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred CCccCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhhhcCCchhH
Confidence 57999999999999886 58999999999999999999999999999999876 8999999999999999987 45666
Q ss_pred HHHHHHHHHHcCCc
Q 024536 227 LASYARFLWDAGEE 240 (266)
Q Consensus 227 ~~~lA~ll~~~G~~ 240 (266)
...+..++...+.+
T Consensus 80 ~~~l~~~l~~~~~~ 93 (100)
T 3ma5_A 80 LSELQDAKLKAEGL 93 (100)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcccc
Confidence 67777777655544
No 125
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.32 E-value=3.2e-11 Score=90.02 Aligned_cols=88 Identities=22% Similarity=0.346 Sum_probs=82.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|.++.++.++|.++. ..|++++|..+|++++..+|.++.++..++.++.. .|++++|+.+|
T Consensus 49 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~ 126 (136)
T 2fo7_A 49 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYY 126 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-HccHHHHHHHH
Confidence 68999999999999999999999999999876 58999999999999999999999999999998876 89999999999
Q ss_pred HHHHHhCCCC
Q 024536 214 DRAVHSAPDD 223 (266)
Q Consensus 214 ekAL~l~P~d 223 (266)
++++.++|++
T Consensus 127 ~~~~~~~~~~ 136 (136)
T 2fo7_A 127 QKALELDPRS 136 (136)
T ss_dssp HHHHHHSTTC
T ss_pred HHHHccCCCC
Confidence 9999999974
No 126
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.32 E-value=7.2e-12 Score=100.73 Aligned_cols=91 Identities=11% Similarity=0.040 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 024536 154 ALVLANYAKFLKEIRGDFVKAEEYCGRAILA------------------KPGDGNVLSMYGDLIWINHKDAPRAKSYFDR 215 (266)
Q Consensus 154 ~~al~nlA~~L~~~~gd~e~A~~~~erAL~l------------------dP~da~al~nla~ll~~~~gd~deAi~~~ek 215 (266)
+..+.+.|..++ ..|++++|+.+|++||.+ +|.++.+|.++|.++.. .|++++|+.+|++
T Consensus 11 a~~~~~~G~~~~-~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 11 VEALRQKGNELF-VQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHH
Confidence 467788888876 589999999999999999 77888999999999877 7999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 216 AVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 216 AL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
||.++|+++.+++.+|.++...|++++|++.
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~ 119 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEED 119 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHHH
Confidence 9999999999999999999999999999954
No 127
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.31 E-value=3.8e-12 Score=107.34 Aligned_cols=111 Identities=15% Similarity=0.170 Sum_probs=99.5
Q ss_pred CCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA--------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--------KPGDGNVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel--------~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l--------dP~da~al~nla~ 197 (266)
+++++|+.+|++++++ +|....++.++|.++. ..|++++|+.+|++++.+ +|....++.++|.
T Consensus 99 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 177 (283)
T 3edt_B 99 GKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ-NQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLAS 177 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 6899999999999999 5777889999999876 589999999999999999 7888899999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-------------------------------------------------CCCCHHHHH
Q 024536 198 LIWINHKDAPRAKSYFDRAVHS-------------------------------------------------APDDCHVLA 228 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l-------------------------------------------------~P~da~a~~ 228 (266)
++.. .|++++|+.+|++++.+ .|..+.++.
T Consensus 178 ~~~~-~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (283)
T 3edt_B 178 CYLK-QGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLR 256 (283)
T ss_dssp HHHH-HTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 9877 79999999999999997 255567889
Q ss_pred HHHHHHHHcCCccccccc
Q 024536 229 SYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 229 ~lA~ll~~~G~~~eA~~~ 246 (266)
.+|.++...|++++|++.
T Consensus 257 ~la~~~~~~g~~~~A~~~ 274 (283)
T 3edt_B 257 SLGALYRRQGKLEAAHTL 274 (283)
T ss_dssp HHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHH
Confidence 999999999999999854
No 128
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.31 E-value=6.7e-12 Score=94.21 Aligned_cols=94 Identities=12% Similarity=0.106 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------H
Q 024536 152 EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD-------C 224 (266)
Q Consensus 152 ~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~d-------a 224 (266)
..+.+++++|.++. ..+++++|..+|++++..+|+++.++.++|.++.. .+++++|+.+|++++.+.|++ +
T Consensus 2 ~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 79 (131)
T 1elr_A 2 KQALKEKELGNDAY-KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-KGDYNKCRELCEKAIEVGRENREDYRQIA 79 (131)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred hHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhccccchhHHHHH
Confidence 45678899998876 58999999999999999999999999999998876 799999999999999999987 8
Q ss_pred HHHHHHHHHHHHcCCcccccccc
Q 024536 225 HVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 225 ~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
.++..+|.++...|++++|++..
T Consensus 80 ~~~~~la~~~~~~~~~~~A~~~~ 102 (131)
T 1elr_A 80 KAYARIGNSYFKEEKYKDAIHFY 102 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHH
Confidence 99999999999999999999643
No 129
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.31 E-value=2.6e-11 Score=111.72 Aligned_cols=111 Identities=14% Similarity=0.091 Sum_probs=94.2
Q ss_pred CCHHHHHHHHHHHHHH---------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA---------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--------KPGDGNVLSMYG 196 (266)
Q Consensus 134 ~~~eeA~~~y~rALel---------~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l--------dP~da~al~nla 196 (266)
|++++|+++|++|+++ +|....+|.|+|.+++ .+|++++|+.+|++|+.+ .++.+.++.+.|
T Consensus 65 G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~-~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g 143 (472)
T 4g1t_A 65 GQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYY-HMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEG 143 (472)
T ss_dssp TCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHH
Confidence 5899999999999997 7888899999999886 589999999999999987 356788999988
Q ss_pred HHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---cCCcccccc
Q 024536 197 DLIWIN-HKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWD---AGEEEDDDD 245 (266)
Q Consensus 197 ~ll~~~-~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~---~G~~~eA~~ 245 (266)
+++... ++++++|+.+|++|++++|+++.++..++.++.. .++.++|++
T Consensus 144 ~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~ 196 (472)
T 4g1t_A 144 WTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAID 196 (472)
T ss_dssp HHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHH
T ss_pred HHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 776553 3579999999999999999999999999988654 455666654
No 130
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.31 E-value=1.4e-11 Score=96.96 Aligned_cols=92 Identities=14% Similarity=-0.067 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 024536 154 ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARF 233 (266)
Q Consensus 154 ~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~l 233 (266)
+..++++|..+. ..|++++|..+|++++.++|+++.++.++|.++.. .+++++|+.+|++++.++|+++.++..+|.+
T Consensus 13 ~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~ 90 (166)
T 1a17_A 13 AEELKTQANDYF-KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-TECYGYALGDATRAIELDKKYIKGYYRRAAS 90 (166)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 567888888776 58999999999999999999999999999998876 8999999999999999999999999999999
Q ss_pred HHHcCCcccccccc
Q 024536 234 LWDAGEEEDDDDGD 247 (266)
Q Consensus 234 l~~~G~~~eA~~~~ 247 (266)
+...|++++|++.-
T Consensus 91 ~~~~~~~~~A~~~~ 104 (166)
T 1a17_A 91 NMALGKFRAALRDY 104 (166)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHhccHHHHHHHH
Confidence 99999999999643
No 131
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.31 E-value=5.9e-12 Score=95.96 Aligned_cols=92 Identities=15% Similarity=0.117 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHH
Q 024536 155 LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG---NVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD---CHVLA 228 (266)
Q Consensus 155 ~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da---~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~d---a~a~~ 228 (266)
.+++++|..+. ..|++++|..+|++++..+|+++ .+++++|.+++. .|++++|+.+|++++..+|++ +.++.
T Consensus 3 ~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 3 RTAYNVAFDAL-KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp CCHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 35677888776 58999999999999999999999 899999998877 899999999999999999999 89999
Q ss_pred HHHHHHHHcCCccccccccc
Q 024536 229 SYARFLWDAGEEEDDDDGDD 248 (266)
Q Consensus 229 ~lA~ll~~~G~~~eA~~~~~ 248 (266)
.+|.++...|++++|++.-+
T Consensus 81 ~la~~~~~~g~~~~A~~~~~ 100 (129)
T 2xev_A 81 KLGLSQYGEGKNTEAQQTLQ 100 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999996543
No 132
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.30 E-value=8.1e-12 Score=115.07 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=93.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHH--cCC
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN------VLSMYGDLIWIN--HKD 205 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~------al~nla~ll~~~--~gd 205 (266)
+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|..+|++++.++|+++. ++.++|.++... .|+
T Consensus 352 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 430 (514)
T 2gw1_A 352 NKFDDCETLFSEAKRKFPEAPEVPNFFAEILT-DKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVEN 430 (514)
T ss_dssp TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTH
T ss_pred CCHHHHHHHHHHHHHHcccCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCC
Confidence 67888888888888888888888888888775 578888888888888888888855 888888776431 588
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 206 APRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 206 ~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+++|+.+|++++.++|+++.++..+|.++...|++++|.+.
T Consensus 431 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 471 (514)
T 2gw1_A 431 FIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITL 471 (514)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHH
Confidence 88999999999999998888888889889988988888854
No 133
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.29 E-value=1.7e-11 Score=108.84 Aligned_cols=94 Identities=13% Similarity=0.041 Sum_probs=88.8
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 024536 151 PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASY 230 (266)
Q Consensus 151 P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~l 230 (266)
|.++.++.++|..+. ..|++++|+.+|++|+.++|+++.+++++|.++.. .|++++|+.+|++|++++|+++.++..+
T Consensus 1 p~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l 78 (281)
T 2c2l_A 1 SPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQSVKAHFFL 78 (281)
T ss_dssp CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTSCTTCHHHHHHH
T ss_pred ChhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 678899999999886 58999999999999999999999999999999876 8999999999999999999999999999
Q ss_pred HHHHHHcCCccccccc
Q 024536 231 ARFLWDAGEEEDDDDG 246 (266)
Q Consensus 231 A~ll~~~G~~~eA~~~ 246 (266)
|.++...|++++|++.
T Consensus 79 g~~~~~~g~~~~A~~~ 94 (281)
T 2c2l_A 79 GQCQLEMESYDEAIAN 94 (281)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH
Confidence 9999999999999953
No 134
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.27 E-value=4.4e-12 Score=116.86 Aligned_cols=110 Identities=15% Similarity=0.147 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+++++|+.+|+++++.+|.++.++.++|.++. ..|++++|..+|++++.++|+++.++.++|.++.. .|++++|+.+|
T Consensus 284 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 361 (514)
T 2gw1_A 284 NDSTEYYNYFDKALKLDSNNSSVYYHRGQMNF-ILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYR-ENKFDDCETLF 361 (514)
T ss_dssp SCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHH-HTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTT-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 34566666666666666666666666666554 46777777777777777777777777777766654 67777777777
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
++++..+|+++.++..+|.++...|++++|++
T Consensus 362 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 393 (514)
T 2gw1_A 362 SEAKRKFPEAPEVPNFFAEILTDKNDFDKALK 393 (514)
T ss_dssp HHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcccCHHHHHHHHHHHHHCCCHHHHHH
Confidence 77777777777777777777777777777764
No 135
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.24 E-value=1.4e-10 Score=99.91 Aligned_cols=104 Identities=14% Similarity=0.179 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEI----RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWI---NHKDA 206 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~----~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~---~~gd~ 206 (266)
+++++|+.+|+++++ |+++.+++++|.++. . .+++++|..+|++|++++ ++.+++++|.++.. ..+++
T Consensus 20 ~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~ 94 (273)
T 1ouv_A 20 KDFTQAKKYFEKACD--LKENSGCFNLGVLYY-QGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNT 94 (273)
T ss_dssp TCHHHHHHHHHHHHH--TTCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCH
T ss_pred CCHHHHHHHHHHHHH--CCCHHHHHHHHHHHH-cCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCH
Confidence 356666666666666 566666666666553 4 566666666666666654 56666666655532 04566
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCccccc
Q 024536 207 PRAKSYFDRAVHSAPDDCHVLASYARFLWD----AGEEEDDD 244 (266)
Q Consensus 207 deAi~~~ekAL~l~P~da~a~~~lA~ll~~----~G~~~eA~ 244 (266)
++|+.+|++|++. +++.++.++|.++.. .+++++|+
T Consensus 95 ~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~ 134 (273)
T 1ouv_A 95 NKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAV 134 (273)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred HHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHH
Confidence 6666666666665 356666666666666 66666665
No 136
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.23 E-value=9.2e-11 Score=103.37 Aligned_cols=108 Identities=9% Similarity=0.044 Sum_probs=94.9
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAI---LAKPGDG----NVLSMYGDLIW 200 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~------~~al~nlA~~L~~~~gd~e~A~~~~erAL---~ldP~da----~al~nla~ll~ 200 (266)
+++++|+.+|++|+++.+.. ..+++++|.++. ..|++++|+.+|++|+ ...|++. .+++++|.++.
T Consensus 129 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~ 207 (293)
T 2qfc_A 129 VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY 207 (293)
T ss_dssp SCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHH
Confidence 58999999999999887655 568999999886 5899999999999999 5677754 68999999887
Q ss_pred HHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCcccc
Q 024536 201 INHKDAPRAKSYFDRAVHSAPD------DCHVLASYARFLWDAGEEEDD 243 (266)
Q Consensus 201 ~~~gd~deAi~~~ekAL~l~P~------da~a~~~lA~ll~~~G~~~eA 243 (266)
. .|++++|+.+|++|+.+.++ -+.++.++|.++...|++++|
T Consensus 208 ~-~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 208 L-DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp H-TTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred H-HhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 6 89999999999999998753 277899999999999999999
No 137
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.23 E-value=1.1e-11 Score=106.34 Aligned_cols=111 Identities=19% Similarity=0.261 Sum_probs=99.6
Q ss_pred CCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA--------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAK--------PGDGNVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel--------~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ld--------P~da~al~nla~ 197 (266)
+++++|+.+|++++++ +|..+.++.++|.++. ..|++++|+.+|++++.+. |....++.++|.
T Consensus 83 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~ 161 (311)
T 3nf1_A 83 NKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLAL 161 (311)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 6899999999999998 4666789999999876 5899999999999999984 666788999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 198 LIWINHKDAPRAKSYFDRAVHS--------APDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l--------~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++.. .|++++|+.+|++++.+ .|..+.++..+|.++...|++++|++.
T Consensus 162 ~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 217 (311)
T 3nf1_A 162 LCQN-QGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETL 217 (311)
T ss_dssp HHHT-TTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 8876 89999999999999999 778888999999999999999999854
No 138
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.22 E-value=2e-11 Score=94.02 Aligned_cols=111 Identities=14% Similarity=0.111 Sum_probs=94.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDA------LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~------~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d------a~al~nla~ll~~ 201 (266)
+++++|+.+|++++++.+... .++.++|.++. ..|++++|..+|++|+.+.+.. +.++.++|.++..
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 101 (164)
T 3ro3_A 23 GNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 101 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 689999999999999976533 47888998876 5899999999999999987654 6788899998876
Q ss_pred HcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCccccccc
Q 024536 202 NHKDAPRAKSYFDRAVHSAPD------DCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 202 ~~gd~deAi~~~ekAL~l~P~------da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
.+++++|+.+|++++.+.+. .+.++..+|.+++..|++++|++.
T Consensus 102 -~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 151 (164)
T 3ro3_A 102 -LQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHF 151 (164)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred -HhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHH
Confidence 89999999999999988542 256788999999999999999854
No 139
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.22 E-value=1.4e-11 Score=105.82 Aligned_cols=112 Identities=14% Similarity=0.208 Sum_probs=99.9
Q ss_pred CCHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAY--------PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--------KPGDGNVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~--------P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l--------dP~da~al~nla~ 197 (266)
+++++|+.+|++++++. |....++.++|.++. ..|++++|+.+|++++.+ +|..+.++.++|.
T Consensus 125 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~ 203 (311)
T 3nf1_A 125 GKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ-NQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLAS 203 (311)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 68999999999999985 666788999999876 589999999999999999 7888889999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-------------------------------------------------CCCCHHHHH
Q 024536 198 LIWINHKDAPRAKSYFDRAVHS-------------------------------------------------APDDCHVLA 228 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l-------------------------------------------------~P~da~a~~ 228 (266)
++.. .|++++|+.+|++++.+ .|..+.++.
T Consensus 204 ~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 282 (311)
T 3nf1_A 204 CYLK-QGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLK 282 (311)
T ss_dssp HHHH-HTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHH
Confidence 9877 79999999999999985 466778899
Q ss_pred HHHHHHHHcCCcccccccc
Q 024536 229 SYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 229 ~lA~ll~~~G~~~eA~~~~ 247 (266)
.+|.++...|++++|++..
T Consensus 283 ~la~~~~~~g~~~~A~~~~ 301 (311)
T 3nf1_A 283 NLGALYRRQGKFEAAETLE 301 (311)
T ss_dssp HHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHH
Confidence 9999999999999998643
No 140
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.21 E-value=4.7e-12 Score=97.05 Aligned_cols=78 Identities=18% Similarity=0.180 Sum_probs=70.8
Q ss_pred cCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccc
Q 024536 168 RGDFVKAEEYCGRAILA---KPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 168 ~gd~e~A~~~~erAL~l---dP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~ 244 (266)
.|++++|+.+|++||++ +|+++.++.++|.++.. .|++++|+.+|++|++++|+++.++.++|.++...|++++|+
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 58899999999999999 69999999999999877 899999999999999999999999999999999999999999
Q ss_pred cc
Q 024536 245 DG 246 (266)
Q Consensus 245 ~~ 246 (266)
+.
T Consensus 82 ~~ 83 (117)
T 3k9i_A 82 EL 83 (117)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 141
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.20 E-value=4.6e-11 Score=113.81 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH------cCCHH-------HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHH
Q 024536 137 ESMDVYYQEMIKAYPEDALVLANYAKFLKEI------RGDFV-------KAEEYCGRAIL-AKPGDGNVLSMYGDLIWIN 202 (266)
Q Consensus 137 eeA~~~y~rALel~P~~~~al~nlA~~L~~~------~gd~e-------~A~~~~erAL~-ldP~da~al~nla~ll~~~ 202 (266)
.+|+.+|++||..+|.++.+|+++|.++... .|+++ +|...|++|++ ++|+++.+|..++.++..
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~- 333 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES- 333 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh-
Confidence 5888999999999999999999999987532 68877 99999999998 899999999999988765
Q ss_pred cCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcCCccccccccccc
Q 024536 203 HKDAPRAKSYFDRAVHSAPDDC-HVLASYARFLWDAGEEEDDDDGDDQE 250 (266)
Q Consensus 203 ~gd~deAi~~~ekAL~l~P~da-~a~~~lA~ll~~~G~~~eA~~~~~~~ 250 (266)
.|++++|+.+|++|++++|+++ .+|..++.++...|+.++|.+..+..
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~A 382 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA 382 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 8999999999999999999986 69999999999999999998654433
No 142
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.20 E-value=2.5e-11 Score=109.63 Aligned_cols=104 Identities=15% Similarity=0.216 Sum_probs=95.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHc
Q 024536 134 KESESMDVYYQEMIKAYPEDA----LVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGDGNVLSMYGDLIWINH 203 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~----~al~nlA~~L~~~~gd~e~A~~~~erAL~l------dP~da~al~nla~ll~~~~ 203 (266)
+++++|+.+|+++++++|+++ .+++++|.++. ..|++++|+.+|++|+.+ +|..+.++.++|.++.. .
T Consensus 62 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~ 139 (411)
T 4a1s_A 62 GDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKV-M 139 (411)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-T
T ss_pred CcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHH-C
Confidence 689999999999999999997 58889998876 589999999999999998 68888999999998876 8
Q ss_pred CCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCC
Q 024536 204 KDAPRAKSYFDRAVHS------APDDCHVLASYARFLWDAGE 239 (266)
Q Consensus 204 gd~deAi~~~ekAL~l------~P~da~a~~~lA~ll~~~G~ 239 (266)
|++++|+.+|++|+.+ .|..+.++..+|.++...|+
T Consensus 140 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 140 GRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 9999999999999999 67778899999999999999
No 143
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.20 E-value=1.1e-10 Score=103.62 Aligned_cols=97 Identities=15% Similarity=0.192 Sum_probs=85.7
Q ss_pred HHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHH-----------------
Q 024536 148 KAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAK----------------- 210 (266)
Q Consensus 148 el~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi----------------- 210 (266)
..-|+++.+++.+|..+. ..|++++|+..|+++++++|+++.+++++|.++.. .|++++|+
T Consensus 111 ~~lp~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~-~g~~~~A~~~l~~~~~~~p~~~~~~ 188 (287)
T 3qou_A 111 XVLPREEELXAQQAMQLM-QESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIA-LNRSEDAEAVLXTIPLQDQDTRYQG 188 (287)
T ss_dssp HHSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH-TTCHHHHHHHHTTSCGGGCSHHHHH
T ss_pred HHcCCchhhHHHHHHHHH-hCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHH-CCCHHHHHHHHHhCchhhcchHHHH
Confidence 334999999999999876 58999999999999999999999999999998866 78877765
Q ss_pred -----------------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 211 -----------------SYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 211 -----------------~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
..|+++++++|+++.++.++|.++...|++++|+++
T Consensus 189 ~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~ 241 (287)
T 3qou_A 189 LVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALEL 241 (287)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHH
Confidence 456666888999999999999999999999999964
No 144
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.20 E-value=4.2e-11 Score=114.11 Aligned_cols=115 Identities=16% Similarity=0.147 Sum_probs=91.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDA-LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~-~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~ 212 (266)
+++++|...|+++++++|.++ .+|.+++.++. ..|++++|..+|++|+...|.+..++...+.+.+...|++++|..+
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~ 413 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKI 413 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccccCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHH
Confidence 577888888888888888775 57888877664 4577788888888888877777766666665544447899999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccccc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDDQ 249 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~~ 249 (266)
|++|++..|+++.+|..++.++...|+.++|.+..+.
T Consensus 414 ~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~ 450 (530)
T 2ooe_A 414 FELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFER 450 (530)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHH
Confidence 9999999999999999999999999999988865443
No 145
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.19 E-value=4.5e-10 Score=96.76 Aligned_cols=106 Identities=13% Similarity=0.061 Sum_probs=69.3
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCC
Q 024536 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEI----RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWI---NHKD 205 (266)
Q Consensus 133 ~~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~----~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~---~~gd 205 (266)
.+++++|+.+|++|++.+ ++.+++++|.++. . .+++++|+.+|++|+..+ ++.+++++|.++.. ..++
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~ 129 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYY-SGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRD 129 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCC
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHh-CCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccC
Confidence 356677777777777664 6677777776654 4 567777777777777663 66777777766543 0466
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCcccccc
Q 024536 206 APRAKSYFDRAVHSAPDDCHVLASYARFLWD----AGEEEDDDD 245 (266)
Q Consensus 206 ~deAi~~~ekAL~l~P~da~a~~~lA~ll~~----~G~~~eA~~ 245 (266)
+++|+.+|++|++++ ++.++.++|.++.. .+++++|++
T Consensus 130 ~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~ 171 (273)
T 1ouv_A 130 FKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALA 171 (273)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHH
Confidence 777777777777664 45666667766666 666666663
No 146
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.18 E-value=3.7e-11 Score=105.95 Aligned_cols=110 Identities=9% Similarity=0.035 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDA------LVLANYAKFLKEIRGDFVKAEEYCGRAILA-------KPGDGNVLSMYGDLIW 200 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~------~al~nlA~~L~~~~gd~e~A~~~~erAL~l-------dP~da~al~nla~ll~ 200 (266)
+++++|+.+|++|+++.+... .+++++|.++. ..|++++|+.+|++|+.. .+..+.+++++|.++.
T Consensus 129 ~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~ 207 (293)
T 3u3w_A 129 VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY 207 (293)
T ss_dssp SCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 589999999999999765433 47899998876 589999999999999952 2334568899999987
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCc-ccccc
Q 024536 201 INHKDAPRAKSYFDRAVHSAPDD------CHVLASYARFLWDAGEE-EDDDD 245 (266)
Q Consensus 201 ~~~gd~deAi~~~ekAL~l~P~d------a~a~~~lA~ll~~~G~~-~eA~~ 245 (266)
. .|++++|+.++++|+++.+.. +.++.++|.++...|+. ++|++
T Consensus 208 ~-~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~ 258 (293)
T 3u3w_A 208 L-DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIED 258 (293)
T ss_dssp H-TTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred H-HhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 7 899999999999999998655 78999999999999964 88874
No 147
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.18 E-value=3.1e-11 Score=88.81 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=46.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 024536 159 NYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN-VLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVL 227 (266)
Q Consensus 159 nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~-al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~ 227 (266)
+.|..+. ..|++++|+.+|+++++.+|+++. +++++|.++.. .|++++|+.+|++|++++|+++.++
T Consensus 5 ~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 5 KTIKELI-NQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHH-HHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHH-HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 4454444 357777777777777777777777 77777776655 5677777777777777777777666
No 148
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.18 E-value=4.4e-11 Score=108.55 Aligned_cols=111 Identities=14% Similarity=0.102 Sum_probs=97.3
Q ss_pred CCHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPED-------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG------NVLSMYGDLIW 200 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~-------~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da------~al~nla~ll~ 200 (266)
+++++|+.+|++|+++.+.. +.++.++|.++. ..|++++|+.+|++|+.+.+... .++.++|.++.
T Consensus 157 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 235 (383)
T 3ulq_A 157 KQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL-DLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKN 235 (383)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 68999999999999995544 468899998876 58999999999999999865443 58999999887
Q ss_pred HHcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHHHHHHHHcCCccccccc
Q 024536 201 INHKDAPRAKSYFDRAVH-----SA-PDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 201 ~~~gd~deAi~~~ekAL~-----l~-P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
. .|++++|+.+|++|++ .+ |..+.++.++|.++...|++++|++.
T Consensus 236 ~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 286 (383)
T 3ulq_A 236 S-QSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEY 286 (383)
T ss_dssp H-TTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred H-CCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 6 8999999999999999 57 88889999999999999999999853
No 149
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.14 E-value=1.9e-10 Score=97.55 Aligned_cols=111 Identities=9% Similarity=-0.004 Sum_probs=91.8
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHH---c
Q 024536 132 SGKESESMDVYYQEMIKAYPEDALVLANYAKFLKE---IRGDFVKAEEYCGRAILAKP--GDGNVLSMYGDLIWIN---H 203 (266)
Q Consensus 132 ~~~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~---~~gd~e~A~~~~erAL~ldP--~da~al~nla~ll~~~---~ 203 (266)
...++++|+.+|++|++ ++++.+++++|.++.. ..+++++|+.+|++|++..| +++.+++++|.++... .
T Consensus 65 ~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~ 142 (212)
T 3rjv_A 65 QQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGP 142 (212)
T ss_dssp TSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSS
T ss_pred CCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCC
Confidence 44689999999999954 6899999999987742 15799999999999999988 4599999999887652 4
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC------Ccccccc
Q 024536 204 KDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAG------EEEDDDD 245 (266)
Q Consensus 204 gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G------~~~eA~~ 245 (266)
+|+++|+.+|++|+++ |+++.++.++|.+|.... +.++|++
T Consensus 143 ~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~ 189 (212)
T 3rjv_A 143 EDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALH 189 (212)
T ss_dssp CCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 6899999999999998 778889999999888752 5666663
No 150
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.14 E-value=5.1e-11 Score=96.91 Aligned_cols=110 Identities=10% Similarity=0.096 Sum_probs=92.0
Q ss_pred CCHHHHHHHHHHHHH------HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC----HHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIK------AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA---KPGD----GNVLSMYGDLIW 200 (266)
Q Consensus 134 ~~~eeA~~~y~rALe------l~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l---dP~d----a~al~nla~ll~ 200 (266)
+++++|+.+|+++++ ..|..+.++.++|.++. ..|++++|+.+|++|+.+ .+++ +.++.++|.++.
T Consensus 40 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 118 (203)
T 3gw4_A 40 DRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER-MAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL 118 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 689999999999999 45566788999998876 589999999999999998 4533 567889998887
Q ss_pred HHcCCHHHHHHHHHHHHHhCC--CCH----HHHHHHHHHHHHcCCcccccc
Q 024536 201 INHKDAPRAKSYFDRAVHSAP--DDC----HVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 201 ~~~gd~deAi~~~ekAL~l~P--~da----~a~~~lA~ll~~~G~~~eA~~ 245 (266)
. .|++++|+.+|++++.+.+ .+. .++..+|.+++..|++++|++
T Consensus 119 ~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 168 (203)
T 3gw4_A 119 H-FGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQ 168 (203)
T ss_dssp H-HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred H-hCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 6 7999999999999997743 232 346899999999999999984
No 151
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.13 E-value=4.9e-11 Score=106.38 Aligned_cols=113 Identities=11% Similarity=0.073 Sum_probs=90.6
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~------~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d------a~al~nla~ll~~ 201 (266)
+++++|+.+|++|+++.+.. +.++.++|.++. . |++++|+.+|++|+.+.|.. +.++.++|.++..
T Consensus 90 g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~ 167 (307)
T 2ifu_A 90 QRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME-P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVR 167 (307)
T ss_dssp TCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT-T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Confidence 57889999999999885432 467888888775 4 99999999999999988754 5788889988866
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCcccccccccc
Q 024536 202 NHKDAPRAKSYFDRAVHSAPDD------CHVLASYARFLWDAGEEEDDDDGDDQ 249 (266)
Q Consensus 202 ~~gd~deAi~~~ekAL~l~P~d------a~a~~~lA~ll~~~G~~~eA~~~~~~ 249 (266)
.|++++|+.+|++|+.+.|++ +.++..++.++..+|++++|++..+.
T Consensus 168 -~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ 220 (307)
T 2ifu_A 168 -QQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRE 220 (307)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 789999999999999987754 34677888888888999999865433
No 152
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.13 E-value=4.9e-11 Score=108.21 Aligned_cols=111 Identities=14% Similarity=0.000 Sum_probs=95.6
Q ss_pred CCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG-------DGNVLSMYGDLIW 200 (266)
Q Consensus 134 ~~~eeA~~~y~rALel------~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~-------da~al~nla~ll~ 200 (266)
+++++|+.+|++|+++ .+..+.+++++|.++. ..|++++|..+|++|+.+.+. .+.++.++|.++.
T Consensus 117 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 195 (383)
T 3ulq_A 117 REYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYY-YMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL 195 (383)
T ss_dssp TCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH
Confidence 6899999999999998 3335689999999886 589999999999999998443 3568999999887
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCccccccc
Q 024536 201 INHKDAPRAKSYFDRAVHSAPDDC------HVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 201 ~~~gd~deAi~~~ekAL~l~P~da------~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
. .|++++|+.+|++|+++.|... .++.++|.++...|++++|++.
T Consensus 196 ~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~ 246 (383)
T 3ulq_A 196 D-LKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPY 246 (383)
T ss_dssp H-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred H-hcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 6 8999999999999999976433 4899999999999999999954
No 153
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.12 E-value=3.3e-11 Score=89.18 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHcCCHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWINHKDAP 207 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d------a~al~nla~ll~~~~gd~d 207 (266)
+++++|+.+|+++++++|+++.+++++|.++. ..|++++|+.+|++|++++|++ ..+++.+|.++.. .|+++
T Consensus 18 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~ 95 (111)
T 2l6j_A 18 GLYREAVHCYDQLITAQPQNPVGYSNKAMALI-KLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGA-VGSVQ 95 (111)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHH-HHCCC
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHH-HHhHh
Confidence 68999999999999999999999999999886 5899999999999999999999 8999999988866 57777
Q ss_pred HHHHHHHH
Q 024536 208 RAKSYFDR 215 (266)
Q Consensus 208 eAi~~~ek 215 (266)
+|+..|++
T Consensus 96 ~a~~~~~~ 103 (111)
T 2l6j_A 96 IPVVEVDE 103 (111)
T ss_dssp CCSSSSSS
T ss_pred hhHhHHHH
Confidence 77766654
No 154
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.12 E-value=9e-10 Score=96.99 Aligned_cols=111 Identities=9% Similarity=-0.033 Sum_probs=93.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDAL------VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~------al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d------a~al~nla~ll~~ 201 (266)
+++++|+.+|+++++..|.... .++.+|.++. ..|++++|+.+|++|+.+.+.. ..++.++|.++..
T Consensus 89 ~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 2qfc_A 89 KRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL-KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH-TSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 5899999999999999988763 3455666554 4689999999999999876654 6789999998876
Q ss_pred HcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHcCCccccccc
Q 024536 202 NHKDAPRAKSYFDRAV---HSAPDDC----HVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 202 ~~gd~deAi~~~ekAL---~l~P~da----~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
.|++++|+.+|++|+ ...|++. .++.++|.++...|++++|++.
T Consensus 168 -~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~ 218 (293)
T 2qfc_A 168 -NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQ 218 (293)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHH
Confidence 899999999999999 6677754 5889999999999999999953
No 155
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.12 E-value=7.4e-11 Score=105.06 Aligned_cols=110 Identities=14% Similarity=0.087 Sum_probs=91.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDAL------VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~------al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d------a~al~nla~ll~~ 201 (266)
+++++|+.+|++++++.|.... ++.++|.++. ..|++++|+.+|++|+.+.|.. +.++.++|.++..
T Consensus 201 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 279 (406)
T 3sf4_A 201 GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 279 (406)
T ss_dssp TBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHH
Confidence 5789999999999988776544 8888888775 5799999999999999887766 7788888888766
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCcccccc
Q 024536 202 NHKDAPRAKSYFDRAVHSAPDD------CHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 202 ~~gd~deAi~~~ekAL~l~P~d------a~a~~~lA~ll~~~G~~~eA~~ 245 (266)
.|++++|+.+|++|+.+.+.. +.++..+|.++...|++++|++
T Consensus 280 -~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 328 (406)
T 3sf4_A 280 -LQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMH 328 (406)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred -hCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 789999999999999886654 6678889999999999988885
No 156
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.12 E-value=9.3e-11 Score=100.47 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=92.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHc
Q 024536 134 KESESMDVYYQEMIKAYPEDA----LVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGDGNVLSMYGDLIWINH 203 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~----~al~nlA~~L~~~~gd~e~A~~~~erAL~l------dP~da~al~nla~ll~~~~ 203 (266)
+++++|+.+|+++++++|+++ .++.++|.++. ..|++++|+.+|++|+.+ .|..+.++..+|.++.. .
T Consensus 19 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~ 96 (338)
T 3ro2_A 19 GDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV-L 96 (338)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-T
T ss_pred ccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHH-c
Confidence 689999999999999999995 67888998876 589999999999999998 56667899999998876 8
Q ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC
Q 024536 204 KDAPRAKSYFDRAVHSAPDD------CHVLASYARFLWDAGE 239 (266)
Q Consensus 204 gd~deAi~~~ekAL~l~P~d------a~a~~~lA~ll~~~G~ 239 (266)
|++++|+.+|++++.+.|.. +.++..+|.++...|+
T Consensus 97 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 97 GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 99999999999999997744 3488899999999999
No 157
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.10 E-value=7.4e-10 Score=109.01 Aligned_cols=108 Identities=11% Similarity=0.029 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-
Q 024536 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGD----------FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHK- 204 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd----------~e~A~~~~erAL~ldP~da~al~nla~ll~~~~g- 204 (266)
.++|+++|.++|+++|++..+|++.+.++.. .++ +++|.+++++||+.+|.+..+|++.++++.. .+
T Consensus 45 ~eeal~~~~~~l~~nP~~~taW~~R~~~l~~-l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~-l~~ 122 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATLWNCRREVLQH-LETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR-LPE 122 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-CSS
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHh-cccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccc
Confidence 4799999999999999999999999998864 455 9999999999999999999999999998866 67
Q ss_pred -CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-Ccccccc
Q 024536 205 -DAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAG-EEEDDDD 245 (266)
Q Consensus 205 -d~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G-~~~eA~~ 245 (266)
++++|+++++++++++|.+..+|...++++...+ .+++|++
T Consensus 123 ~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~ 165 (567)
T 1dce_A 123 PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELA 165 (567)
T ss_dssp CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHH
T ss_pred ccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHH
Confidence 6799999999999999999999999999999999 6666664
No 158
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.10 E-value=1.6e-10 Score=97.99 Aligned_cols=107 Identities=11% Similarity=0.139 Sum_probs=91.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG----DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWI---NHKDA 206 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~g----d~e~A~~~~erAL~ldP~da~al~nla~ll~~---~~gd~ 206 (266)
+++++|+.+|++|++. +++.+++++|.++.. + ++++|..+|++|+ +++++.+++++|.++.. ..+|+
T Consensus 32 ~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~--~g~~~~~~~A~~~~~~A~--~~g~~~a~~~Lg~~y~~g~g~~~d~ 105 (212)
T 3rjv_A 32 GDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR--NPQQADYPQARQLAEKAV--EAGSKSGEIVLARVLVNRQAGATDV 105 (212)
T ss_dssp TCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS--STTSCCHHHHHHHHHHHH--HTTCHHHHHHHHHHHTCGGGSSCCH
T ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc--CCCCCCHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCccCH
Confidence 6899999999999875 689999999988753 6 8999999999995 46899999999988753 15799
Q ss_pred HHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH----cCCccccccc
Q 024536 207 PRAKSYFDRAVHSAP--DDCHVLASYARFLWD----AGEEEDDDDG 246 (266)
Q Consensus 207 deAi~~~ekAL~l~P--~da~a~~~lA~ll~~----~G~~~eA~~~ 246 (266)
++|+.+|++|++..| +++.++.++|.+|.. .+++++|++.
T Consensus 106 ~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~ 151 (212)
T 3rjv_A 106 AHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEY 151 (212)
T ss_dssp HHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 999999999999988 458999999999999 7778888743
No 159
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.10 E-value=9.7e-11 Score=104.45 Aligned_cols=110 Identities=16% Similarity=0.173 Sum_probs=94.3
Q ss_pred CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPED------ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG--D----GNVLSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~------~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~--d----a~al~nla~ll~~ 201 (266)
+++++|+.+|++|+++.+.. +.++.++|.++. ..|++++|+.+|++|+.+.+. + +.++.++|.++..
T Consensus 50 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~ 128 (307)
T 2ifu_A 50 KQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLK-DLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP 128 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc
Confidence 68999999999999997643 568888998775 589999999999999998543 2 4678899988743
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCccccccc
Q 024536 202 NHKDAPRAKSYFDRAVHSAPDD------CHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 202 ~~gd~deAi~~~ekAL~l~P~d------a~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
|++++|+.+|++|+++.|.. +.++.++|.++..+|++++|++.
T Consensus 129 --g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 177 (307)
T 2ifu_A 129 --LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAAS 177 (307)
T ss_dssp --TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 99999999999999998854 56889999999999999999964
No 160
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.10 E-value=1.6e-10 Score=102.93 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=92.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHc
Q 024536 134 KESESMDVYYQEMIKAYPEDA----LVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGDGNVLSMYGDLIWINH 203 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~----~al~nlA~~L~~~~gd~e~A~~~~erAL~l------dP~da~al~nla~ll~~~~ 203 (266)
+++++|+.+|+++++++|+++ .++.++|.++. ..|++++|..+|++|+.+ .|..+.++.++|.++.. .
T Consensus 23 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~ 100 (406)
T 3sf4_A 23 GDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV-L 100 (406)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-T
T ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-c
Confidence 689999999999999999995 67889998876 589999999999999998 45667899999998876 8
Q ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC
Q 024536 204 KDAPRAKSYFDRAVHSAPDD------CHVLASYARFLWDAGE 239 (266)
Q Consensus 204 gd~deAi~~~ekAL~l~P~d------a~a~~~lA~ll~~~G~ 239 (266)
|++++|+.+|++|+.+.|.. +.++..+|.++...|+
T Consensus 101 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 101 GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 99999999999999998753 5589999999999999
No 161
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.09 E-value=1.9e-11 Score=111.67 Aligned_cols=106 Identities=10% Similarity=-0.086 Sum_probs=92.7
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHHcC
Q 024536 142 YYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG-----------------NVLSMYGDLIWINHK 204 (266)
Q Consensus 142 ~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da-----------------~al~nla~ll~~~~g 204 (266)
.+...++..+..+..+.++|..++ ..+++++|+.+|++||.++|++. .+|+++|.++.. .+
T Consensus 167 ~~~~~~~~~~~~a~~~~~~g~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g 244 (338)
T 2if4_A 167 RSDMTVEERIGAADRRKMDGNSLF-KEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LK 244 (338)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHTC-SSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TT
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cC
Confidence 444555566667788999998876 57999999999999999999988 489999998876 89
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccccc
Q 024536 205 DAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDDQ 249 (266)
Q Consensus 205 d~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~~ 249 (266)
++++|+.+|++|++++|+++.+++++|.++..+|++++|++..+.
T Consensus 245 ~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~ 289 (338)
T 2if4_A 245 RYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRK 289 (338)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999965433
No 162
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.09 E-value=2.5e-10 Score=92.74 Aligned_cols=110 Identities=11% Similarity=0.043 Sum_probs=92.7
Q ss_pred CCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHHcCCH
Q 024536 134 KESESMDVYYQEMIKAYP-EDALVLANYAKFLKEIRGDFVKAEEYCGRAIL------AKPGDGNVLSMYGDLIWINHKDA 206 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P-~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~------ldP~da~al~nla~ll~~~~gd~ 206 (266)
+++++|++.++.... +| ..+.++.++|.++. ..|++++|+.+|++|+. ..|..+.++.++|.++.. .|++
T Consensus 6 g~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~ 82 (203)
T 3gw4_A 6 HDYALAERQAQALLA-HPATASGARFMLGYVYA-FMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERM-AGNW 82 (203)
T ss_dssp -CHHHHHHHHHHHHT-STTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTCH
T ss_pred ccHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH-cCCH
Confidence 689999996665554 55 67889999998876 58999999999999999 556677899999998876 8999
Q ss_pred HHHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHcCCccccccc
Q 024536 207 PRAKSYFDRAVHS---APDD----CHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 207 deAi~~~ekAL~l---~P~d----a~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++|+.+|++|+.+ .+++ +.++.++|.+++..|++++|++.
T Consensus 83 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 129 (203)
T 3gw4_A 83 DAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQE 129 (203)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 9999999999999 4533 45788999999999999999853
No 163
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.08 E-value=4e-10 Score=85.33 Aligned_cols=74 Identities=11% Similarity=0.019 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 172 VKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 172 e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++|+.+|+++++.+|+++.+++++|.++.. .|++++|+.+|++++.++|+++.++..+|.++...|++++|++.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~ 75 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAE-HEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQA 75 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHH
Confidence 368899999999999999999999998876 89999999999999999999999999999999999999999853
No 164
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.07 E-value=1.5e-09 Score=79.54 Aligned_cols=81 Identities=14% Similarity=0.132 Sum_probs=73.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDAL-VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~-al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~ 212 (266)
+++++|+.+|+++++.+|+++. +++++|.++. ..|++++|+.+|++|++++|+++.++.+ +.+.+|+.+
T Consensus 14 ~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~---------~~~~~a~~~ 83 (99)
T 2kc7_A 14 GDIENALQALEEFLQTEPVGKDEAYYLMGNAYR-KLGDWQKALNNYQSAIELNPDSPALQAR---------KMVMDILNF 83 (99)
T ss_dssp TCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTSTHHHHH---------HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCcHHHHHH---------HHHHHHHHH
Confidence 6899999999999999999999 9999999886 5899999999999999999999988743 357889999
Q ss_pred HHHHHHhCCCCH
Q 024536 213 FDRAVHSAPDDC 224 (266)
Q Consensus 213 ~ekAL~l~P~da 224 (266)
|++++..+|++.
T Consensus 84 ~~~~~~~~p~~~ 95 (99)
T 2kc7_A 84 YNKDMYNQLEHH 95 (99)
T ss_dssp HCCTTHHHHCCS
T ss_pred HHHHhccCcccc
Confidence 999999998764
No 165
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.06 E-value=2e-09 Score=98.64 Aligned_cols=110 Identities=14% Similarity=0.092 Sum_probs=98.8
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHHc--CCH
Q 024536 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG--DFVKAEEYCGRAILAKPGDGNVLSMYGDLI----WINH--KDA 206 (266)
Q Consensus 135 ~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~g--d~e~A~~~~erAL~ldP~da~al~nla~ll----~~~~--gd~ 206 (266)
..++|++++.++|+++|++..+|+..+.++. ..+ ++++|+++++++|..+|.+..+|++.+.++ .... +++
T Consensus 48 ~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~-~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~ 126 (306)
T 3dra_A 48 YSERALHITELGINELASHYTIWIYRFNILK-NLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDP 126 (306)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCT
T ss_pred CCHHHHHHHHHHHHHCcHHHHHHHHHHHHHH-HcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCH
Confidence 3479999999999999999999999999886 456 999999999999999999999999999888 4421 789
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcc--cccc
Q 024536 207 PRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEE--DDDD 245 (266)
Q Consensus 207 deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~--eA~~ 245 (266)
++++.+++++++++|.+..+|..-++++...++++ ++++
T Consensus 127 ~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~ 167 (306)
T 3dra_A 127 YREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELS 167 (306)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHH
Confidence 99999999999999999999999999999999887 5553
No 166
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.06 E-value=1.4e-10 Score=99.41 Aligned_cols=111 Identities=14% Similarity=0.076 Sum_probs=81.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDA------LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~------~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d------a~al~nla~ll~~ 201 (266)
+++++|+.+|++++++.+... .++.++|.++. ..|++++|+.+|++++.+.+.. +.++.++|.++..
T Consensus 197 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 275 (338)
T 3ro2_A 197 GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 275 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Confidence 577888888888887765432 27777777665 4688888888888888876655 6677778877765
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCccccccc
Q 024536 202 NHKDAPRAKSYFDRAVHSAPDD------CHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 202 ~~gd~deAi~~~ekAL~l~P~d------a~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
.|++++|+.+|++|+.+.+.. ..++..+|.++...|++++|.+.
T Consensus 276 -~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 325 (338)
T 3ro2_A 276 -LQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHF 325 (338)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred -hcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 788888888888888776532 44677788888888888887753
No 167
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.05 E-value=5.6e-10 Score=109.87 Aligned_cols=107 Identities=7% Similarity=-0.080 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-----------
Q 024536 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG-DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN----------- 202 (266)
Q Consensus 135 ~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~g-d~e~A~~~~erAL~ldP~da~al~nla~ll~~~----------- 202 (266)
++++|+++|.++++++|.|..+|++.+.++. ..+ .+++|.++++++|+.+|.|..+|++.+.++...
T Consensus 124 ~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~-~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~ 202 (567)
T 1dce_A 124 NWARELELCARFLEADERNFHCWDYRRFVAA-QAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGR 202 (567)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCS
T ss_pred cHHHHHHHHHHHHhhccccccHHHHHHHHHH-HcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccccccccccc
Confidence 6899999999999999999999999998876 466 899999999999999999999999999888663
Q ss_pred --cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccc
Q 024536 203 --HKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEED 242 (266)
Q Consensus 203 --~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~e 242 (266)
.+.+++|++++++||.++|++..+|+++++++...+++++
T Consensus 203 ~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~~~~ 244 (567)
T 1dce_A 203 LPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPHDV 244 (567)
T ss_dssp SCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCCCSC
T ss_pred ccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCCccc
Confidence 1457999999999999999999999999999998888555
No 168
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.05 E-value=2.2e-10 Score=106.49 Aligned_cols=92 Identities=13% Similarity=-0.024 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 024536 154 ALVLANYAKFLKEIRGDFVKAEEYCGRAIL----------------AKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAV 217 (266)
Q Consensus 154 ~~al~nlA~~L~~~~gd~e~A~~~~erAL~----------------ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL 217 (266)
+..|.++|..++ ..+++++|+.+|++||+ ++|.++.+|.++|.+++. .+++++|+.+|++|+
T Consensus 223 a~~~~~~g~~~~-~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 223 SEDLKNIGNTFF-KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHH
Confidence 456888998876 58999999999999999 889999999999999876 899999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 218 HSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 218 ~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
+++|+++.+++.+|.++..++++++|++.-
T Consensus 301 ~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l 330 (370)
T 1ihg_A 301 EIDPSNTKALYRRAQGWQGLKEYDQALADL 330 (370)
T ss_dssp TTCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhCchhHHHHHHHHHHHHHccCHHHHHHHH
Confidence 999999999999999999999999999643
No 169
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.05 E-value=2e-09 Score=76.78 Aligned_cols=67 Identities=21% Similarity=0.298 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~ 201 (266)
+++++|+.+|+++++++|+++.+++++|.++. ..+++++|+.+|+++++++|+++.++.++|.++..
T Consensus 23 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 68999999999999999999999999999886 58999999999999999999999999999988754
No 170
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.04 E-value=1.5e-10 Score=104.42 Aligned_cols=110 Identities=15% Similarity=0.039 Sum_probs=91.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDAL------VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~------al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d------a~al~nla~ll~~ 201 (266)
+++++|+.+|++++++.|.... ++.++|.++. ..|++++|+.+|++|+.+.|.. +.++.++|.++..
T Consensus 237 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 315 (411)
T 4a1s_A 237 GDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHI-FLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTL 315 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 6889999999999998876543 7888888775 5799999999999999988754 6788888988866
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCcccccc
Q 024536 202 NHKDAPRAKSYFDRAVHSAPDD------CHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 202 ~~gd~deAi~~~ekAL~l~P~d------a~a~~~lA~ll~~~G~~~eA~~ 245 (266)
.|++++|+.+|++++.+.+.. +.++..+|.++...|++++|.+
T Consensus 316 -~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 364 (411)
T 4a1s_A 316 -LHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALK 364 (411)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 789999999999999886542 4578889999999999998884
No 171
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.04 E-value=3.2e-10 Score=103.08 Aligned_cols=111 Identities=15% Similarity=-0.049 Sum_probs=96.7
Q ss_pred CCHHHHHHHHHHHHHHCCC-------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPE-------DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKP------GDGNVLSMYGDLIW 200 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~-------~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP------~da~al~nla~ll~ 200 (266)
+++++|+.+|++|+++.+. .+.+++++|.++. ..|++++|+.+|++|+.+.+ ..+.++.++|.++.
T Consensus 155 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 233 (378)
T 3q15_A 155 KQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYD-DFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYD 233 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 6899999999999998654 2457889998876 68999999999999999743 23468899999887
Q ss_pred HHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 201 INHKDAPRAKSYFDRAVH-----SAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 201 ~~~gd~deAi~~~ekAL~-----l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
. .|++++|+.+|++|+. .+|..+.++..+|.++...|++++|++.
T Consensus 234 ~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 283 (378)
T 3q15_A 234 R-SGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQF 283 (378)
T ss_dssp H-HTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred H-CCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 7 7999999999999999 8898899999999999999999999853
No 172
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.03 E-value=1.4e-10 Score=97.46 Aligned_cols=77 Identities=12% Similarity=0.090 Sum_probs=69.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 024536 168 RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKD----------APRAKSYFDRAVHSAPDDCHVLASYARFLWDA 237 (266)
Q Consensus 168 ~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd----------~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~ 237 (266)
.+.+++|.+.|++|++++|+++++|.++|.++.. .++ +++|+..|++||+++|+++.+++++|.+|..+
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~-l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE-LSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-hcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 4568999999999999999999999999998876 444 56999999999999999999999999999988
Q ss_pred C-----------Ccccccc
Q 024536 238 G-----------EEEDDDD 245 (266)
Q Consensus 238 G-----------~~~eA~~ 245 (266)
| ++++|++
T Consensus 94 g~l~P~~~~a~g~~~eA~~ 112 (158)
T 1zu2_A 94 AFLTPDETEAKHNFDLATQ 112 (158)
T ss_dssp HHHCCCHHHHHHHHHHHHH
T ss_pred cccCcchhhhhccHHHHHH
Confidence 5 7888885
No 173
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.03 E-value=9.5e-10 Score=83.61 Aligned_cols=74 Identities=16% Similarity=0.024 Sum_probs=67.1
Q ss_pred CCCCHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 024536 150 YPEDALVLANYAKFLKEIRGD---FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCH 225 (266)
Q Consensus 150 ~P~~~~al~nlA~~L~~~~gd---~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~ 225 (266)
+|+++.++..+|.+++. .++ .++|..++++||++||+++.+++.+|.++++ .|+|++|+.+|+++++.+|.++.
T Consensus 2 ~p~~~~~~~~~a~al~~-~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 2 NAVTATQLAAKATTLYY-LHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCCCHHHHHHHHHHHHH-TTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCcc
Confidence 79999999999999863 343 6999999999999999999999999999887 89999999999999999998543
No 174
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.03 E-value=3.8e-11 Score=115.11 Aligned_cols=92 Identities=14% Similarity=-0.067 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 024536 154 ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARF 233 (266)
Q Consensus 154 ~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~l 233 (266)
+.++.++|..+. ..|++++|+++|++|++++|+++.++.++|.++.. .+++++|+.+|++|++++|+++.++.++|.+
T Consensus 6 a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~ 83 (477)
T 1wao_1 6 AEELKTQANDYF-KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-TECYGYALGDATRAIELDKKYIKGYYRRAAS 83 (477)
T ss_dssp HTTSSSSSSSTT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 445566666655 57999999999999999999999999999999877 8999999999999999999999999999999
Q ss_pred HHHcCCcccccccc
Q 024536 234 LWDAGEEEDDDDGD 247 (266)
Q Consensus 234 l~~~G~~~eA~~~~ 247 (266)
+..+|++++|++.-
T Consensus 84 ~~~~g~~~eA~~~~ 97 (477)
T 1wao_1 84 NMALGKFRAALRDY 97 (477)
T ss_dssp HHHHTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHH
Confidence 99999999999643
No 175
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.01 E-value=6.6e-10 Score=97.85 Aligned_cols=111 Identities=9% Similarity=-0.033 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHH------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALV------LANYAKFLKEIRGDFVKAEEYCGRAILAKPGD------GNVLSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~a------l~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d------a~al~nla~ll~~ 201 (266)
+++++|+.+|+++++..+.++.. +..+|.++. ..+++++|+.+|++|+.+.+.. ..++.++|.++..
T Consensus 89 ~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 3u3w_A 89 KRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL-KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHT-TSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHH-cccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 68999999999999999888762 223565543 4679999999999999975443 3478999998876
Q ss_pred HcCCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 202 NHKDAPRAKSYFDRAVHS-------APDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 202 ~~gd~deAi~~~ekAL~l-------~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
.|++++|+.+|++|++. .+..+.++.++|.++...|++++|++.
T Consensus 168 -~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~ 218 (293)
T 3u3w_A 168 -NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQ 218 (293)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 89999999999999953 223345789999999999999999953
No 176
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.01 E-value=4.3e-09 Score=96.43 Aligned_cols=109 Identities=9% Similarity=0.006 Sum_probs=99.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC------
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFV--KAEEYCGRAILAKPGDGNVLSMYGDLIWINHKD------ 205 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e--~A~~~~erAL~ldP~da~al~nla~ll~~~~gd------ 205 (266)
.+++++++++.++++.+|.|..+|++.+.++. ..+.++ +++++++++|+.+|.|..+|.+.+.++.. .++
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~-~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~-l~~~~~~~~ 201 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVD-TFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS-KKHLATDNT 201 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS-SGGGCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh-ccccchhhh
Confidence 35799999999999999999999999998885 578888 99999999999999999999999988865 455
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccc
Q 024536 206 APRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 206 ~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~ 244 (266)
+++++.+++++|.++|+|..+|+.++.++...|+..++.
T Consensus 202 ~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~ 240 (306)
T 3dra_A 202 IDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQL 240 (306)
T ss_dssp HHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGG
T ss_pred HHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHH
Confidence 999999999999999999999999999999999976655
No 177
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.98 E-value=2.3e-09 Score=85.65 Aligned_cols=105 Identities=16% Similarity=0.107 Sum_probs=87.2
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCHHH
Q 024536 132 SGKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWI---NHKDAPR 208 (266)
Q Consensus 132 ~~~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~---~~gd~de 208 (266)
..+++++|+.+|++|.+.....+. +|.++. ....+++|..+|++|.+. +++.+++++|.++.. ..+|+++
T Consensus 7 ~~~d~~~A~~~~~~aa~~g~~~a~----lg~~y~-~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~ 79 (138)
T 1klx_A 7 VKKDLKKAIQYYVKACELNEMFGC----LSLVSN-SQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRK 79 (138)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTHH----HHHHTC-TTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred CccCHHHHHHHHHHHHcCCCHhhh----HHHHHH-cCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHH
Confidence 347899999999999998755544 887664 456788899999999987 789999999988764 1579999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCcccccc
Q 024536 209 AKSYFDRAVHSAPDDCHVLASYARFLWD----AGEEEDDDD 245 (266)
Q Consensus 209 Ai~~~ekAL~l~P~da~a~~~lA~ll~~----~G~~~eA~~ 245 (266)
|+.+|++|.+. .++.++.++|.+|.. ..+.++|++
T Consensus 80 A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~ 118 (138)
T 1klx_A 80 AAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVK 118 (138)
T ss_dssp HHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHH
T ss_pred HHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHH
Confidence 99999999987 788999999999998 778877774
No 178
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.96 E-value=6e-09 Score=86.95 Aligned_cols=97 Identities=11% Similarity=0.024 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG---DFVKAEEYCGRAILAK-P-GDGNVLSMYGDLIWINHKDAPR 208 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~g---d~e~A~~~~erAL~ld-P-~da~al~nla~ll~~~~gd~de 208 (266)
.....+++.|.++++.+|.+..+.++||+.|.. .. ++++++.+++..++.+ | ++.++++++|..+++ .++|++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~-S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k-l~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVR-SKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-TSCHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH-ccCHHH
Confidence 567889999999999999999999999998853 34 6789999999999999 8 678999999999987 799999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHH
Q 024536 209 AKSYFDRAVHSAPDDCHVLASYAR 232 (266)
Q Consensus 209 Ai~~~ekAL~l~P~da~a~~~lA~ 232 (266)
|+.|++++|+++|++.++..-.-.
T Consensus 90 A~~y~~~lL~ieP~n~QA~~Lk~~ 113 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAKELERL 113 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHH
Confidence 999999999999999988755433
No 179
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.95 E-value=1.7e-09 Score=97.00 Aligned_cols=111 Identities=9% Similarity=0.148 Sum_probs=93.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDAL-----VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG------NVLSMYGDLIWIN 202 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~-----al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da------~al~nla~ll~~~ 202 (266)
+++++|+.+++++++..|.+.. ++.++|.++. ..|++++|+.++++|+.+.|... .++.++|.++..
T Consensus 28 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~- 105 (373)
T 1hz4_A 28 GNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLH-CKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA- 105 (373)
T ss_dssp TCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-
Confidence 6899999999999999886632 6778887765 57999999999999999876543 346788988866
Q ss_pred cCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCccccccc
Q 024536 203 HKDAPRAKSYFDRAVHSA--------PDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 203 ~gd~deAi~~~ekAL~l~--------P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
.|++++|+.+|++++++. |..+.++.++|.+++..|++++|++.
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 157 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEAS 157 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 899999999999999986 34456788899999999999999854
No 180
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.94 E-value=2.4e-09 Score=96.12 Aligned_cols=111 Identities=14% Similarity=0.119 Sum_probs=94.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDA------LVLANYAKFLKEIRGDFVKAEEYCGRAILAK--------PGDGNVLSMYGDLI 199 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~------~al~nlA~~L~~~~gd~e~A~~~~erAL~ld--------P~da~al~nla~ll 199 (266)
+++++|+.+|++++++.|... .++.++|.++. ..|++++|+.+|++++++. |....++.++|.++
T Consensus 67 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 145 (373)
T 1hz4_A 67 GELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILF-AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLL 145 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHH
Confidence 689999999999999877543 34678888775 5899999999999999976 44567788899988
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHcCCccccccc
Q 024536 200 WINHKDAPRAKSYFDRAVHSAPD-----DCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 200 ~~~~gd~deAi~~~ekAL~l~P~-----da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+. .|++++|+.++++++.+.|. ...++..+|.++...|++++|.+.
T Consensus 146 ~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 196 (373)
T 1hz4_A 146 WA-WARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQ 196 (373)
T ss_dssp HH-TTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HH-hcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 77 89999999999999999885 246788999999999999999854
No 181
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.94 E-value=6.6e-10 Score=100.95 Aligned_cols=111 Identities=18% Similarity=0.002 Sum_probs=94.1
Q ss_pred CCHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYP------EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG-------DGNVLSMYGDLIW 200 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P------~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~-------da~al~nla~ll~ 200 (266)
+++++|+.+|++|+++.+ ..+.+++++|.++. ..|++++|..++++|+.+.+. .+.++.++|.++.
T Consensus 115 g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~ 193 (378)
T 3q15_A 115 KEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYY-HMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYD 193 (378)
T ss_dssp TCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 689999999999998843 34678999999886 589999999999999997543 2567889999887
Q ss_pred HHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCccccccc
Q 024536 201 INHKDAPRAKSYFDRAVHSAPD------DCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 201 ~~~gd~deAi~~~ekAL~l~P~------da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
. .|++++|+.+|++|+++.+. .+.++.++|.++...|++++|++.
T Consensus 194 ~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~ 244 (378)
T 3q15_A 194 D-FKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEH 244 (378)
T ss_dssp H-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred H-hCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 6 89999999999999998541 245788999999999999999954
No 182
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.94 E-value=5.1e-09 Score=98.01 Aligned_cols=106 Identities=11% Similarity=0.012 Sum_probs=98.1
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHH
Q 024536 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG-DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHK-DAPRAKSY 212 (266)
Q Consensus 135 ~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~g-d~e~A~~~~erAL~ldP~da~al~nla~ll~~~~g-d~deAi~~ 212 (266)
..++|++++.++|.++|++..+|+..+.++. ..+ ++++++++++++|..+|.+..+|++.++++....+ ++++++.+
T Consensus 69 ~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~-~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~ 147 (349)
T 3q7a_A 69 KSERALELTEIIVRMNPAHYTVWQYRFSLLT-SLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEY 147 (349)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHhCchhHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHH
Confidence 4478999999999999999999999999886 456 69999999999999999999999999999977536 89999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCcc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGEEE 241 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~~~ 241 (266)
++++++++|.|..+|...++++...++++
T Consensus 148 ~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 148 IHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999988877
No 183
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.89 E-value=7.8e-10 Score=100.75 Aligned_cols=110 Identities=12% Similarity=-0.160 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCC-HHHHHHHHHHHHHHcCCHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAK-PGD-GNVLSMYGDLIWINHKDAPRAKS 211 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ld-P~d-a~al~nla~ll~~~~gd~deAi~ 211 (266)
+++++|.+.|+.++..+|++. +++.+|.+++ ..+++++|+.+|++++... |.. ..+++++|.++.. .|++++|+.
T Consensus 116 g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~-~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~-LG~~~eAl~ 192 (282)
T 4f3v_A 116 GNYADAMEALEAAPVAGSEHL-VAWMKAVVYG-AAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN-LALFTEAER 192 (282)
T ss_dssp TCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHH-HTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCchH-HHHHHHHHHH-HcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH-CCCHHHHHH
Confidence 799999999999999999999 9999998776 5899999999999887763 221 3589999998866 899999999
Q ss_pred HHHHHHHhC--CC-CHHHHHHHHHHHHHcCCccccccc
Q 024536 212 YFDRAVHSA--PD-DCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 212 ~~ekAL~l~--P~-da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+|++++... |. .+.+++++|.++.++|+.++|.++
T Consensus 193 ~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~ 230 (282)
T 4f3v_A 193 RLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVAL 230 (282)
T ss_dssp HHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999654 55 667999999999999999999954
No 184
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.88 E-value=3.8e-08 Score=78.53 Aligned_cols=93 Identities=14% Similarity=0.165 Sum_probs=77.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCCHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKE---IRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWIN---HKDAP 207 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~---~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~---~gd~d 207 (266)
...++|+.+|++|.+. +++.+++++|.++.. ..+|+++|..+|++|.+. .++.+++++|.++..- .+|++
T Consensus 39 ~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~ 114 (138)
T 1klx_A 39 INKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEK 114 (138)
T ss_dssp SCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred CCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHH
Confidence 4567899999999997 899999999998763 168999999999999987 7899999999888651 57999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHH
Q 024536 208 RAKSYFDRAVHSAPDDCHVLASYAR 232 (266)
Q Consensus 208 eAi~~~ekAL~l~P~da~a~~~lA~ 232 (266)
+|+.+|++|.+. .++.+..+++.
T Consensus 115 ~A~~~~~~Aa~~--g~~~A~~~l~~ 137 (138)
T 1klx_A 115 QAVKTFEKACRL--GSEDACGILNN 137 (138)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHC--
T ss_pred HHHHHHHHHHHC--CCHHHHHHHhh
Confidence 999999999998 45666665553
No 185
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.88 E-value=4.8e-09 Score=96.23 Aligned_cols=90 Identities=16% Similarity=0.190 Sum_probs=80.6
Q ss_pred CCCHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHcCC
Q 024536 133 GKESESMDVYYQEMIKAYPE--DALVLANYAKFLKEI----RGDFVKAEEYCGRAILAKPGD-GNVLSMYGDLIWINHKD 205 (266)
Q Consensus 133 ~~~~eeA~~~y~rALel~P~--~~~al~nlA~~L~~~----~gd~e~A~~~~erAL~ldP~d-a~al~nla~ll~~~~gd 205 (266)
.....+|...+++||+++|+ +..+|..+|.++..+ -|+.++|+++|+|||+++|+. ..+++.||.++...++|
T Consensus 176 l~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd 255 (301)
T 3u64_A 176 PDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN 255 (301)
T ss_dssp HHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC
T ss_pred HHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC
Confidence 36788999999999999999 677999999877531 389999999999999999975 99999999988765699
Q ss_pred HHHHHHHHHHHHHhCCC
Q 024536 206 APRAKSYFDRAVHSAPD 222 (266)
Q Consensus 206 ~deAi~~~ekAL~l~P~ 222 (266)
+++|.+++++|+..+|.
T Consensus 256 ~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 256 RAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 99999999999999887
No 186
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.87 E-value=2.1e-08 Score=93.08 Aligned_cols=102 Identities=8% Similarity=0.019 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-HHHHHHH
Q 024536 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG--DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKD-APRAKSY 212 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~g--d~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd-~deAi~~ 212 (266)
+++++.++.++|..+|.+..+|++.+.++. ..+ ++++++.++.++++++|.|..+|.+.+.++.. .+. +++++.+
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~-~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~-l~~~~~eel~~ 167 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAF 167 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCcCHHHHHHH
Confidence 789999999999999999999999999886 456 58999999999999999999999999988866 577 6999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGE 239 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~ 239 (266)
++++|+.+|.|..+|++.+.++.....
T Consensus 168 ~~~~I~~~p~N~SAW~~R~~ll~~l~~ 194 (331)
T 3dss_A 168 TDSLITRNFSNYSSWHYRSCLLPQLHP 194 (331)
T ss_dssp HHHHHHHCSCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999988743
No 187
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.86 E-value=8.3e-09 Score=97.59 Aligned_cols=93 Identities=16% Similarity=0.211 Sum_probs=67.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-----CH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLK--EIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHK-----DA 206 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~--~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~g-----d~ 206 (266)
+++++|+.+|++++ |+++.+++++|.+++ ...+++++|..+|++|++. +++.+++++|.++.. | |+
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~~--G~g~~~d~ 303 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYYE--GKWVPADA 303 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH--CSSSCCCH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHc--CCCCCCCH
Confidence 57777777777776 777777777777643 2357777788888777754 477777777776643 4 77
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 024536 207 PRAKSYFDRAVHSAPDDCHVLASYARFLWD 236 (266)
Q Consensus 207 deAi~~~ekAL~l~P~da~a~~~lA~ll~~ 236 (266)
++|+.+|++|+ |+++.+++++|.+|..
T Consensus 304 ~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~ 330 (452)
T 3e4b_A 304 KAAEAHFEKAV---GREVAADYYLGQIYRR 330 (452)
T ss_dssp HHHHHHHHTTT---TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh---CCCHHHHHHHHHHHHC
Confidence 88888888777 7777777777766665
No 188
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.85 E-value=2.1e-08 Score=93.10 Aligned_cols=108 Identities=11% Similarity=0.024 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-
Q 024536 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGD----------FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHK- 204 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd----------~e~A~~~~erAL~ldP~da~al~nla~ll~~~~g- 204 (266)
.++|++++.++|.++|++..+|+..+.++.. .+. +++++.+++++|..+|.+..+|++.++++.. .+
T Consensus 46 s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~-l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~-l~~ 123 (331)
T 3dss_A 46 DESVLELTSQILGANPDFATLWNCRREVLQH-LETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR-LPE 123 (331)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-CSS
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHH-hcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhc-cCc
Confidence 3689999999999999999999999988753 332 7899999999999999999999999999876 55
Q ss_pred -CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCc-ccccc
Q 024536 205 -DAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEE-EDDDD 245 (266)
Q Consensus 205 -d~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~-~eA~~ 245 (266)
++++++.+++++++++|.|..+|..-++++...++. +++++
T Consensus 124 ~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~ 166 (331)
T 3dss_A 124 PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELA 166 (331)
T ss_dssp CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHH
Confidence 589999999999999999999999999999999984 56653
No 189
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.82 E-value=9e-09 Score=99.97 Aligned_cols=109 Identities=10% Similarity=0.058 Sum_probs=92.1
Q ss_pred CCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA-----KPGDG---NVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel-----~P~~~---~al~nlA~~L~~~~gd~e~A~~~~erAL~l-----dP~da---~al~nla~ 197 (266)
+++++|+.+|+++|++ .|+|+ .+++|+|.++. .+|+|++|+.+|++||++ -|++| ..++|+|.
T Consensus 323 g~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 401 (490)
T 3n71_A 323 GLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLS-YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGL 401 (490)
T ss_dssp TCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 7899999999999987 45665 57788998876 689999999999999985 46666 46889999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHcCCccccc
Q 024536 198 LIWINHKDAPRAKSYFDRAVHS-----APDDCH---VLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l-----~P~da~---a~~~lA~ll~~~G~~~eA~ 244 (266)
+++. +|++++|+.+|++|+++ -|+++. ....++.++.+++.+++|+
T Consensus 402 ~~~~-~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae 455 (490)
T 3n71_A 402 TNWH-AGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNE 455 (490)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-CCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877 89999999999999975 577765 4568888888888888888
No 190
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.82 E-value=1.2e-08 Score=96.54 Aligned_cols=107 Identities=12% Similarity=0.163 Sum_probs=92.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HHcCCHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEI---RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIW--INHKDAPR 208 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~---~gd~e~A~~~~erAL~ldP~da~al~nla~ll~--~~~gd~de 208 (266)
.++++|+.+|+++++.+|.++.+++++|.++... .+++++|..+|++|+ |+++.+++++|.+++ ...+|+++
T Consensus 193 ~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~ 269 (452)
T 3e4b_A 193 EQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQ 269 (452)
T ss_dssp HHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHH
T ss_pred ccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHH
Confidence 4899999999999999999999999999887421 269999999999998 999999999999855 44799999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----Cccccccc
Q 024536 209 AKSYFDRAVHSAPDDCHVLASYARFLWDAG-----EEEDDDDG 246 (266)
Q Consensus 209 Ai~~~ekAL~l~P~da~a~~~lA~ll~~~G-----~~~eA~~~ 246 (266)
|+.+|++|++. +++.+++++|.+|. .| ++++|++.
T Consensus 270 A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~ 309 (452)
T 3e4b_A 270 MMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAH 309 (452)
T ss_dssp HHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHH
Confidence 99999999965 58999999999888 55 66666643
No 191
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.81 E-value=4.9e-08 Score=91.88 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC---C
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIR-----GDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHK---D 205 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~-----gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~g---d 205 (266)
+++++|+.+|++|++. +++.+++++|.++. .. +++++|+.+|++|++. +++.+++++|.++.. .+ +
T Consensus 273 ~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~-~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~-~g~~~~ 346 (490)
T 2xm6_A 273 KEPLKALEWYRKSAEQ--GNSDGQYYLAHLYD-KGAEGVAKNREQAISWYTKSAEQ--GDATAQANLGAIYFR-LGSEEE 346 (490)
T ss_dssp CCHHHHHHHHHHHHTT--TCHHHHHHHHHHHH-HCBTTBCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH-SCCHHH
T ss_pred CCHHHHHHHHHHHHHc--CCHHHHHHHHHHHH-cCCCCCcCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHh-CCCccc
Confidence 4555555555555443 44555555555443 22 4555555555555543 334455555554433 22 4
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCccccc
Q 024536 206 APRAKSYFDRAVHSAPDDCHVLASYARFLWD----AGEEEDDD 244 (266)
Q Consensus 206 ~deAi~~~ekAL~l~P~da~a~~~lA~ll~~----~G~~~eA~ 244 (266)
+++|+.+|++|++. +++.++.++|.++.. .+++++|+
T Consensus 347 ~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~ 387 (490)
T 2xm6_A 347 HKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAA 387 (490)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHH
Confidence 55555555555554 345555555555555 44444444
No 192
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.81 E-value=7.4e-09 Score=77.57 Aligned_cols=62 Identities=19% Similarity=0.217 Sum_probs=56.3
Q ss_pred hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 184 AKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 184 ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
.+|+++.+++++|.+++. .|++++|+.+|++|++++|+++.++..+|.++...|++++|++.
T Consensus 2 ~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~ 63 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLK-HDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDT 63 (100)
T ss_dssp ---CCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHH
Confidence 479999999999999877 89999999999999999999999999999999999999999853
No 193
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.81 E-value=6.8e-08 Score=90.95 Aligned_cols=107 Identities=10% Similarity=0.112 Sum_probs=72.2
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCH
Q 024536 133 GKESESMDVYYQEMIKAYPEDALVLANYAKFLKEI---RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWI---NHKDA 206 (266)
Q Consensus 133 ~~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~---~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~---~~gd~ 206 (266)
.+++++|+.+|++|++. +++.+++++|.++... .+++++|+.+|++|+.. +++.+++++|.++.. ..+++
T Consensus 92 ~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~ 167 (490)
T 2xm6_A 92 PQDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDY 167 (490)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred CCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCH
Confidence 45677777777777664 4677777777765421 45777777777777664 467777777766643 14577
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCcccccc
Q 024536 207 PRAKSYFDRAVHSAPDDCHVLASYARFLWD----AGEEEDDDD 245 (266)
Q Consensus 207 deAi~~~ekAL~l~P~da~a~~~lA~ll~~----~G~~~eA~~ 245 (266)
++|+.+|++|++. +++.++..+|.++.. .+++++|++
T Consensus 168 ~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~ 208 (490)
T 2xm6_A 168 VMAREWYSKAAEQ--GNVWSCNQLGYMYSRGLGVERNDAISAQ 208 (490)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCCCcCHHHHHH
Confidence 7777777777765 467777777777776 566666653
No 194
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.78 E-value=1.8e-08 Score=95.03 Aligned_cols=120 Identities=8% Similarity=-0.026 Sum_probs=90.9
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH--HcC--C---HHHHHHHHH--HHHHhCCCCHHHHHHHHHHHHHH
Q 024536 132 SGKESESMDVYYQEMIKAYPEDALVLANYAKFLKE--IRG--D---FVKAEEYCG--RAILAKPGDGNVLSMYGDLIWIN 202 (266)
Q Consensus 132 ~~~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~--~~g--d---~e~A~~~~e--rAL~ldP~da~al~nla~ll~~~ 202 (266)
+..++.+|+.+|++|++++|+++.+|..++.++.. ..+ . .+.....++ .++..+|.++.++..++.+++.
T Consensus 211 ~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~- 289 (372)
T 3ly7_A 211 DDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALV- 289 (372)
T ss_dssp SHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHh-
Confidence 45778999999999999999999999877665421 112 1 111112222 2335679999999999987765
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccccccccC
Q 024536 203 HKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGDDQETCA 253 (266)
Q Consensus 203 ~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~~~~~~~ 253 (266)
+|++++|+.++++|+.++|+ ..++..+|.++...|+.++|+++-+..-.+
T Consensus 290 ~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 290 KGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp HTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 79999999999999999974 778889999999999999999765443333
No 195
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.77 E-value=1.2e-08 Score=78.17 Aligned_cols=91 Identities=15% Similarity=0.075 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----
Q 024536 154 ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG------NVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD---- 223 (266)
Q Consensus 154 ~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da------~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~d---- 223 (266)
+.++.++|.++. ..+++++|+.+|++|+.+.+... .++.++|.++.. .|++++|+.+|++++.+.+..
T Consensus 9 ~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~ 86 (164)
T 3ro3_A 9 GRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIF-LGEFETASEYYKKTLLLARQLKDRA 86 (164)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhCCcH
Confidence 457788888776 58999999999999999876432 478889998876 899999999999999987653
Q ss_pred --HHHHHHHHHHHHHcCCccccccc
Q 024536 224 --CHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 224 --a~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
+.++.++|.++...|++++|++.
T Consensus 87 ~~~~~~~~l~~~~~~~~~~~~A~~~ 111 (164)
T 3ro3_A 87 VEAQSCYSLGNTYTLLQDYEKAIDY 111 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 56889999999999999999853
No 196
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.76 E-value=2.4e-08 Score=93.47 Aligned_cols=104 Identities=12% Similarity=-0.003 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH------
Q 024536 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRG-DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAP------ 207 (266)
Q Consensus 135 ~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~g-d~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~d------ 207 (266)
.++++++++.++|..+|++..+|++.+.++....+ ++++++++++++|.++|.|..+|.+.+.++.. .+.++
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~-l~~~~~~~~~~ 182 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSH-FSTLGRISEAQ 182 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHH-HHHTTCCCHHH
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccccccchhh
Confidence 68999999999999999999999999998865436 89999999999999999999999999988866 45566
Q ss_pred --HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 024536 208 --RAKSYFDRAVHSAPDDCHVLASYARFLWDAGE 239 (266)
Q Consensus 208 --eAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~ 239 (266)
+++++++++|+.+|.|..+|.+.+.++...++
T Consensus 183 ~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 183 WGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999998887
No 197
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.75 E-value=1.3e-07 Score=72.04 Aligned_cols=80 Identities=14% Similarity=0.135 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 024536 154 ALVLANYAKFLKEIRGDFVKAEEYCGRAILAK-------PGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHV 226 (266)
Q Consensus 154 ~~al~nlA~~L~~~~gd~e~A~~~~erAL~ld-------P~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a 226 (266)
+.-.+.+|.+++ ..++|..|...|++|+... +..+.++.++|.++++ .|++++|+.++++|++++|++..+
T Consensus 5 a~dc~~lG~~~~-~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 5 AEDCFELGKVAY-TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHH-HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCCHHH
Confidence 455678888887 5899999999999999974 3567899999999987 899999999999999999999999
Q ss_pred HHHHHHHHH
Q 024536 227 LASYARFLW 235 (266)
Q Consensus 227 ~~~lA~ll~ 235 (266)
+.++..+-.
T Consensus 83 ~~n~~~~~~ 91 (104)
T 2v5f_A 83 NGNLKYFEY 91 (104)
T ss_dssp HHHHHHHHH
T ss_pred HhhHHHHHH
Confidence 988884433
No 198
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.74 E-value=2.3e-08 Score=95.73 Aligned_cols=93 Identities=10% Similarity=0.009 Sum_probs=78.0
Q ss_pred CCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA-----KPGDG---NVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel-----~P~~~---~al~nlA~~L~~~~gd~e~A~~~~erAL~l-----dP~da---~al~nla~ 197 (266)
+++++|+.+|+++|++ .|+|+ ..++|+|.++. .+|+|++|+.+|++||++ -|+++ ..++|+|.
T Consensus 312 g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 312 KSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCL-YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp SCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 5789999999999996 57776 56788998876 689999999999999985 46665 46889999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHH
Q 024536 198 LIWINHKDAPRAKSYFDRAVHS-----APDDCHVLA 228 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l-----~P~da~a~~ 228 (266)
+++. +|++++|+.+|+||+++ -|+++.+..
T Consensus 391 ~~~~-qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 391 LYMG-LENKAAGEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred HHHh-ccCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 9877 89999999999999986 478876643
No 199
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.64 E-value=8.5e-08 Score=87.28 Aligned_cols=95 Identities=9% Similarity=-0.099 Sum_probs=80.3
Q ss_pred CCHHHHHHHHHHHHHHCCC-C-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHcCCHHH
Q 024536 134 KESESMDVYYQEMIKAYPE-D-ALVLANYAKFLKEIRGDFVKAEEYCGRAILAK--PG-DGNVLSMYGDLIWINHKDAPR 208 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~-~-~~al~nlA~~L~~~~gd~e~A~~~~erAL~ld--P~-da~al~nla~ll~~~~gd~de 208 (266)
+++++|+.+|++++...+. . ..+++++|.++. ..|++++|+.+|++|+... |. .+++++++|.++.. +|+.++
T Consensus 149 ~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~-~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~-lGr~de 226 (282)
T 4f3v_A 149 ERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA-NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRS-QGNESA 226 (282)
T ss_dssp TCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH-HTCHHH
T ss_pred CCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH-HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH-cCCHHH
Confidence 7999999999988775322 1 358999999875 6899999999999999655 66 66799999999877 799999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHH
Q 024536 209 AKSYFDRAVHSAPDDCHVLASYA 231 (266)
Q Consensus 209 Ai~~~ekAL~l~P~da~a~~~lA 231 (266)
|+.+|+++++.+|+ +.+...|.
T Consensus 227 A~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 227 AVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp HHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHHHHHHHHhcCCc-HHHHHHHh
Confidence 99999999999999 87776653
No 200
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.60 E-value=9.3e-08 Score=87.67 Aligned_cols=97 Identities=14% Similarity=0.036 Sum_probs=78.3
Q ss_pred CCCCHHHHHHHHHHHHH---H-cC------CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHH----cCCHHHHHHHH
Q 024536 150 YPEDALVLANYAKFLKE---I-RG------DFVKAEEYCGRAILAKPG--DGNVLSMYGDLIWIN----HKDAPRAKSYF 213 (266)
Q Consensus 150 ~P~~~~al~nlA~~L~~---~-~g------d~e~A~~~~erAL~ldP~--da~al~nla~ll~~~----~gd~deAi~~~ 213 (266)
+|+++.+++..|..+.. . .+ ...+|...++|||++||+ +..+|..+|.+|... .|+.++|+++|
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~f 227 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAF 227 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHH
Confidence 45567766666654321 1 23 358999999999999999 788999999887652 49999999999
Q ss_pred HHHHHhCCCC-HHHHHHHHHHHHHc-CCccccccc
Q 024536 214 DRAVHSAPDD-CHVLASYARFLWDA-GEEEDDDDG 246 (266)
Q Consensus 214 ekAL~l~P~d-a~a~~~lA~ll~~~-G~~~eA~~~ 246 (266)
+|||+++|+. ..++..||.+++.. ++.++|++.
T Consensus 228 erAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~ 262 (301)
T 3u64_A 228 EHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEA 262 (301)
T ss_dssp HHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHH
T ss_pred HHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHH
Confidence 9999999975 99999999999885 888888854
No 201
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.50 E-value=3.9e-07 Score=86.76 Aligned_cols=101 Identities=14% Similarity=-0.018 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHHH
Q 024536 134 KESESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAILA-----KPGDGN---VLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel-----~P~~~---~al~nlA~~L~~~~gd~e~A~~~~erAL~l-----dP~da~---al~nla~ 197 (266)
+++++|+.+|+++|++ .|+|+ .++.|+|.++. .+|+|++|+.+++++|++ -|++|. .++++|.
T Consensus 301 g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~-~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~ 379 (429)
T 3qwp_A 301 WKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACI-NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGK 379 (429)
T ss_dssp TCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHH
Confidence 5889999999999975 56676 56788888776 589999999999999985 466664 5889999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHH---HHHHHHHHH
Q 024536 198 LIWINHKDAPRAKSYFDRAVHS-----APDDCHVL---ASYARFLWD 236 (266)
Q Consensus 198 ll~~~~gd~deAi~~~ekAL~l-----~P~da~a~---~~lA~ll~~ 236 (266)
+++. +|++++|+.+|++|+++ -|+++.+. .+++.++.+
T Consensus 380 ~~~~-~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 380 LQLH-QGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHh-cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 9877 89999999999999986 57877653 455555543
No 202
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.35 E-value=7.5e-07 Score=67.40 Aligned_cols=62 Identities=10% Similarity=0.029 Sum_probs=56.9
Q ss_pred CCCCHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 185 KPGDGNVLSMYGDLIWINHKD---APRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 185 dP~da~al~nla~ll~~~~gd---~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
+|++++++..+|.+++. .++ .++|+.++++|++++|+++.++..+|.++++.|++++|++.-
T Consensus 2 ~p~~~~~~~~~a~al~~-~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w 66 (93)
T 3bee_A 2 NAVTATQLAAKATTLYY-LHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTW 66 (93)
T ss_dssp CCCCHHHHHHHHHHHHH-TTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 79999999999999976 444 799999999999999999999999999999999999999643
No 203
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.29 E-value=2.5e-06 Score=86.00 Aligned_cols=112 Identities=9% Similarity=0.025 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 024536 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAE-EYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFD 214 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~-~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~e 214 (266)
.++....|++||...|.++.+|..||.++. ..++.++|. ..|++|+...|.+...|..++.+... .+++++|..+|+
T Consensus 325 ~~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~-~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~-~~~~e~aR~iye 402 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCFAPEIWFNMANYQG-EKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYEL-NTKIPEIETTIL 402 (679)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCCHHHHHHHHH
Confidence 345678999999999999999999999875 568888996 99999999999999999999987755 799999999999
Q ss_pred HHHHh-----------CCC-----------CHHHHHHHHHHHHHcCCcccccccccc
Q 024536 215 RAVHS-----------APD-----------DCHVLASYARFLWDAGEEEDDDDGDDQ 249 (266)
Q Consensus 215 kAL~l-----------~P~-----------da~a~~~lA~ll~~~G~~~eA~~~~~~ 249 (266)
+++.. .|. .+.+|..++.+....+..+.|.++.+.
T Consensus 403 k~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~ 459 (679)
T 4e6h_A 403 SCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGK 459 (679)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 99985 253 456899999999999988888865443
No 204
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.28 E-value=4.7e-06 Score=63.23 Aligned_cols=63 Identities=11% Similarity=0.114 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHHHHHC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAY-------PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGD 197 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~-------P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ 197 (266)
+++..|+.+|++|++.. +..+.++.+||.+++ ..|++++|..++++|++++|+++.++.|+..
T Consensus 19 ~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~ 88 (104)
T 2v5f_A 19 ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLELDPEHQRANGNLKY 88 (104)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHhhHHH
Confidence 68999999999999974 356789999999887 5899999999999999999999999988873
No 205
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.25 E-value=5.8e-06 Score=77.96 Aligned_cols=77 Identities=9% Similarity=-0.014 Sum_probs=66.6
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 024536 146 MIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCH 225 (266)
Q Consensus 146 ALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~ 225 (266)
++..+|.++.++..++..+. ..|++++|..++++|++++|+ ..+|..+|.++. ..|++++|++.|++|+.++|....
T Consensus 269 a~~~~~~~a~~~~alal~~l-~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~-~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 269 TLPELNNLSIIYQIKAVSAL-VKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYE-MKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp TCGGGTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred hcccCCcCHHHHHHHHHHHH-hCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcCh
Confidence 34667999999999987664 479999999999999999975 778888888775 589999999999999999998764
No 206
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.24 E-value=1e-05 Score=65.41 Aligned_cols=96 Identities=11% Similarity=0.038 Sum_probs=80.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEI--RGDFVKAEEYCGRAILAK-P-GDGNVLSMYGDLIWINHKDAPRA 209 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~--~gd~e~A~~~~erAL~ld-P-~da~al~nla~ll~~~~gd~deA 209 (266)
.....++..|.+++..++....+.++||+.|... ..+..+++.+++..+..+ | ..-+.++.+|..+++ .|+|++|
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk-lg~Y~~A 93 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-hhhHHHH
Confidence 3467788999999999999999999999988421 124566999999999987 5 566889999999988 7999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHH
Q 024536 210 KSYFDRAVHSAPDDCHVLASY 230 (266)
Q Consensus 210 i~~~ekAL~l~P~da~a~~~l 230 (266)
+.+++.+|+.+|+|.++..-.
T Consensus 94 ~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 94 LKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHH
Confidence 999999999999999886543
No 207
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.23 E-value=1.2e-06 Score=79.38 Aligned_cols=110 Identities=7% Similarity=0.047 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCH-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH------
Q 024536 134 KESESMDVYYQEMIKAYPEDA-----------------LVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN------ 190 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~-----------------~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~------ 190 (266)
+++++|++.|+++++.+|... .++.++|.++. ..|++++|..+|++++...+....
T Consensus 18 ~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 96 (434)
T 4b4t_Q 18 KQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYV-TMGAKDKLREFIPHSTEYMMQFAKSKTVKV 96 (434)
T ss_dssp TCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHTHHHHHTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 689999999999999999864 35888998876 589999999999999997665432
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCcccccc
Q 024536 191 VLSMYGDLIWINHKDAPRAKSYFDRAVHSAPD------DCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 191 al~nla~ll~~~~gd~deAi~~~ekAL~l~P~------da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
+..+++.++ ...+++++|+.++++++...+. .+.++..+|.++...|++++|.+
T Consensus 97 ~~~~l~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 156 (434)
T 4b4t_Q 97 LKTLIEKFE-QVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLA 156 (434)
T ss_dssp HHHHHHHHC-SCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHH
Confidence 344556554 3478999999999999987543 35678899999999999999984
No 208
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.22 E-value=1.1e-06 Score=84.01 Aligned_cols=77 Identities=8% Similarity=0.039 Sum_probs=66.2
Q ss_pred cCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHH
Q 024536 168 RGDFVKAEEYCGRAILA-----KPGDG---NVLSMYGDLIWINHKDAPRAKSYFDRAVHS-----APDDCH---VLASYA 231 (266)
Q Consensus 168 ~gd~e~A~~~~erAL~l-----dP~da---~al~nla~ll~~~~gd~deAi~~~ekAL~l-----~P~da~---a~~~lA 231 (266)
.|+|++|+.+|+++|++ .|+++ .++.++|.+|.. +|+|++|+.+|+++|++ -|+++. .++++|
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 47899999999999994 57776 567889998876 89999999999999976 456555 588999
Q ss_pred HHHHHcCCcccccc
Q 024536 232 RFLWDAGEEEDDDD 245 (266)
Q Consensus 232 ~ll~~~G~~~eA~~ 245 (266)
.+|+.+|++++|+.
T Consensus 390 ~~~~~qg~~~eA~~ 403 (433)
T 3qww_A 390 RLYMGLENKAAGEK 403 (433)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHhccCHHHHHH
Confidence 99999999999994
No 209
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.17 E-value=2.1e-06 Score=86.47 Aligned_cols=122 Identities=11% Similarity=0.043 Sum_probs=101.5
Q ss_pred CCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA-YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (266)
Q Consensus 134 ~~~eeA~~~y~rALel-~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~ 212 (266)
++.+.|.+.|.+|++. .+....+|..+|.+-+...++++.|.+.|+++|+..|+++..|..|+.+... .++.++|..+
T Consensus 448 ~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~-~~~~~~AR~l 526 (679)
T 4e6h_A 448 QGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY-VNEESQVKSL 526 (679)
T ss_dssp HCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh-CCCHHHHHHH
Confidence 4578999999999998 5556778887776554333568999999999999999999999999988766 6899999999
Q ss_pred HHHHHHhCCC---CHHHHHHHHHHHHHcCCcccccccccccccCCCC
Q 024536 213 FDRAVHSAPD---DCHVLASYARFLWDAGEEEDDDDGDDQETCASQP 256 (266)
Q Consensus 213 ~ekAL~l~P~---da~a~~~lA~ll~~~G~~~eA~~~~~~~~~~~~~ 256 (266)
|++|+...|+ ...+|..+..+-...|+.+.+.++.+...+.+|.
T Consensus 527 feral~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~P~ 573 (679)
T 4e6h_A 527 FESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKFPE 573 (679)
T ss_dssp HHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHSTT
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 9999999984 5567889999999999999888777666666654
No 210
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.16 E-value=6e-06 Score=76.00 Aligned_cols=106 Identities=8% Similarity=0.005 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHH--HHHHHHHcC
Q 024536 134 KESESMDVYYQEMIKAYP--EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG-----DGNVLSMY--GDLIWINHK 204 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P--~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~-----da~al~nl--a~ll~~~~g 204 (266)
+++++|+++|.+.|..+| ++.+++..++.++. .+|+.+.|.+.++++.+.+|+ +.. +..+ +++... +|
T Consensus 114 g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L-~~~r~d~A~k~l~~~~~~~~d~~~~~d~~-l~~Laea~v~l~-~g 190 (310)
T 3mv2_B 114 GDLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL-LNNNVSTASTIFDNYTNAIEDTVSGDNEM-ILNLAESYIKFA-TN 190 (310)
T ss_dssp TCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCHHHHHHHHH-HHHHHHHHHHHH-HT
T ss_pred CCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCccccccchHH-HHHHHHHHHHHH-hC
Confidence 567777777777777776 66666666666654 467777777777777777773 332 2233 333332 23
Q ss_pred --CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCcccccc
Q 024536 205 --DAPRAKSYFDRAVHSAPD--DCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 205 --d~deAi~~~ekAL~l~P~--da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
++.+|..+|+++....|+ ....+.+ ++..+|++++|++
T Consensus 191 ~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~ 232 (310)
T 3mv2_B 191 KETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQG 232 (310)
T ss_dssp CSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHH
Confidence 677777777777666665 2333333 6777777777774
No 211
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.15 E-value=3.9e-06 Score=77.28 Aligned_cols=115 Identities=14% Similarity=0.109 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024536 139 MDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKP--GDGNVLSMYGDLIWINHKDAPRAKSYFDRA 216 (266)
Q Consensus 139 A~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP--~da~al~nla~ll~~~~gd~deAi~~~ekA 216 (266)
|+..|++.++..+....++..+|.++. ..|++++|++++.++|..+| ++.+++...+.++.. .++.+.|.+.++++
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~-~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~-~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQA-ILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALL-NNNVSTASTIFDNY 162 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHH-HcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHH-CCCHHHHHHHHHHH
Confidence 677888888887777778888888776 57999999999999999997 889999988888876 89999999999999
Q ss_pred HHhCCC-----CH-HHHHHHHHHHHHcC--CcccccccccccccCCC
Q 024536 217 VHSAPD-----DC-HVLASYARFLWDAG--EEEDDDDGDDQETCASQ 255 (266)
Q Consensus 217 L~l~P~-----da-~a~~~lA~ll~~~G--~~~eA~~~~~~~~~~~~ 255 (266)
.+.+|+ +. .....-+++.+..| ++++|..+.++....+|
T Consensus 163 ~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 163 TNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFP 209 (310)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSC
T ss_pred HhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCC
Confidence 999993 33 23333355566666 88888866554544444
No 212
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.14 E-value=3.5e-06 Score=81.69 Aligned_cols=78 Identities=15% Similarity=0.238 Sum_probs=67.2
Q ss_pred HcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHH
Q 024536 167 IRGDFVKAEEYCGRAILA-----KPGDG---NVLSMYGDLIWINHKDAPRAKSYFDRAVHS-----APDDCH---VLASY 230 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~l-----dP~da---~al~nla~ll~~~~gd~deAi~~~ekAL~l-----~P~da~---a~~~l 230 (266)
.+|+|++|+.+|+++|++ .|+++ .++.++|.+|.. +|+|++|+.++++||++ -|+++. .++++
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 399 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRA 399 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 479999999999999985 46665 568889988876 89999999999999976 466655 58899
Q ss_pred HHHHHHcCCcccccc
Q 024536 231 ARFLWDAGEEEDDDD 245 (266)
Q Consensus 231 A~ll~~~G~~~eA~~ 245 (266)
|.+|+.+|++++|+.
T Consensus 400 a~~~~~~G~~~eA~~ 414 (490)
T 3n71_A 400 GLTNWHAGHIEVGHG 414 (490)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHHCCCHHHHHH
Confidence 999999999999994
No 213
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.10 E-value=7.5e-06 Score=74.18 Aligned_cols=111 Identities=7% Similarity=-0.004 Sum_probs=90.3
Q ss_pred CCCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHH
Q 024536 133 GKESESMDVYYQEMIKAYPE------DALVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGDGNVLSMYGDLIW 200 (266)
Q Consensus 133 ~~~~eeA~~~y~rALel~P~------~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l------dP~da~al~nla~ll~ 200 (266)
.+++++|+.+|++++...+. .+.++.++|.++. ..|++++|..++++++.. .+...+++.+.+.++.
T Consensus 108 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (434)
T 4b4t_Q 108 PDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHY-QKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYH 186 (434)
T ss_dssp CSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH-HccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 36789999999999987543 3678899999876 589999999999999986 4455688999999887
Q ss_pred HHcCCHHHHHHHHHHHHHhCC---CC----HHHHHHHHHHHHHcCCcccccc
Q 024536 201 INHKDAPRAKSYFDRAVHSAP---DD----CHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 201 ~~~gd~deAi~~~ekAL~l~P---~d----a~a~~~lA~ll~~~G~~~eA~~ 245 (266)
. .+++++|+.+|++|+.+.+ +. +.++..++.++...+++++|..
T Consensus 187 ~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~ 237 (434)
T 4b4t_Q 187 K-LRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFS 237 (434)
T ss_dssp H-TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred H-hCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 6 8999999999999998864 23 2456677888888888888873
No 214
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.95 E-value=2.7e-05 Score=84.14 Aligned_cols=84 Identities=14% Similarity=0.013 Sum_probs=65.1
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 024536 151 PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASY 230 (266)
Q Consensus 151 P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~l 230 (266)
.+.+.+|++||.++. ..|++++|+.+|.+| +|+..|...+.++.+ .|++++|+++|++|++..++. .+...+
T Consensus 1102 vn~p~vWsqLAKAql-~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~-lGkyEEAIeyL~mArk~~~e~-~Idt~L 1173 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQL-QKGMVKEAIDSYIKA-----DDPSSYMEVVQAANT-SGNWEELVKYLQMARKKARES-YVETEL 1173 (1630)
T ss_pred cCCHHHHHHHHHHHH-hCCCHHHHHHHHHhc-----CChHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhcccc-cccHHH
Confidence 577899999998775 689999999999886 888999999988765 799999999999999888542 233346
Q ss_pred HHHHHHcCCccc
Q 024536 231 ARFLWDAGEEED 242 (266)
Q Consensus 231 A~ll~~~G~~~e 242 (266)
|..|.+.++.++
T Consensus 1174 afaYAKl~rlee 1185 (1630)
T 1xi4_A 1174 IFALAKTNRLAE 1185 (1630)
T ss_pred HHHHHhhcCHHH
Confidence 666666655553
No 215
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.93 E-value=1.3e-05 Score=76.22 Aligned_cols=78 Identities=12% Similarity=-0.021 Sum_probs=66.9
Q ss_pred HcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHH
Q 024536 167 IRGDFVKAEEYCGRAILA-----KPGDG---NVLSMYGDLIWINHKDAPRAKSYFDRAVHS-----APDDCH---VLASY 230 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~l-----dP~da---~al~nla~ll~~~~gd~deAi~~~ekAL~l-----~P~da~---a~~~l 230 (266)
.+|++++|+.+|++++++ .|+++ .++.++|.++.. +|++++|+.++++++++ -|+++. .++++
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nL 377 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 377 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHH
Confidence 479999999999999984 46665 568889988876 79999999999999976 366665 58899
Q ss_pred HHHHHHcCCcccccc
Q 024536 231 ARFLWDAGEEEDDDD 245 (266)
Q Consensus 231 A~ll~~~G~~~eA~~ 245 (266)
|.+|+.+|++++|+.
T Consensus 378 a~~~~~~g~~~eA~~ 392 (429)
T 3qwp_A 378 GKLQLHQGMFPQAMK 392 (429)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHhcCCHHHHHH
Confidence 999999999999994
No 216
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.79 E-value=9.2e-05 Score=71.25 Aligned_cols=110 Identities=15% Similarity=0.072 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-----------------
Q 024536 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDL----------------- 198 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~l----------------- 198 (266)
.+++...|++||...|..+.+|.+|+.++. ..++.++|...|++|+.. |.+...+..++.+
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~-~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~ 272 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLI-GIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMG 272 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhh
Confidence 466788999999999999999999999875 589999999999999999 9987666555543
Q ss_pred -----------------------HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-Ccccccccccc
Q 024536 199 -----------------------IWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAG-EEEDDDDGDDQ 249 (266)
Q Consensus 199 -----------------------l~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G-~~~eA~~~~~~ 249 (266)
..+ .++.++|..+|++| ...+....++...|.+-+..+ +.+.|.++.+.
T Consensus 273 ~~~~~~~~~~~~~~~lw~~y~~~~~r-~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~ 345 (493)
T 2uy1_A 273 EAESAEKVFSKELDLLRINHLNYVLK-KRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSS 345 (493)
T ss_dssp --------CHHHHHHHHHHHHHHHHH-HHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHH
T ss_pred ccchhhhhcccccHHHHHHHHHHHHH-cCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHH
Confidence 111 34578888888888 332335566666666666555 36666655443
No 217
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.76 E-value=4e-05 Score=63.73 Aligned_cols=76 Identities=13% Similarity=-0.004 Sum_probs=68.1
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCCccccc
Q 024536 170 DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHK---DAPRAKSYFDRAVHSA-P-DDCHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 170 d~e~A~~~~erAL~ldP~da~al~nla~ll~~~~g---d~deAi~~~ekAL~l~-P-~da~a~~~lA~ll~~~G~~~eA~ 244 (266)
++..+++.|.+++..+|.+.++.++||+++.+ .. ++++|+.+|+..++.+ | ++.++++++|..+.+.+++++|.
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~-S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVR-SKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHH
Confidence 35788899999999999999999999999976 45 6789999999999999 7 66889999999999999999999
Q ss_pred cc
Q 024536 245 DG 246 (266)
Q Consensus 245 ~~ 246 (266)
+.
T Consensus 92 ~y 93 (152)
T 1pc2_A 92 KY 93 (152)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 218
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.73 E-value=0.0003 Score=67.64 Aligned_cols=111 Identities=11% Similarity=0.087 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHH----------------------------------------HHHHcCCHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKF----------------------------------------LKEIRGDFVK 173 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~----------------------------------------L~~~~gd~e~ 173 (266)
++.++|...|++|+.. |.+..+|..|+.+ +. ..++.++
T Consensus 227 ~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~-r~~~~~~ 304 (493)
T 2uy1_A 227 GQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVL-KKRGLEL 304 (493)
T ss_dssp TCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHH-HHHCHHH
T ss_pred CCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHH-HcCCHHH
Confidence 4679999999999999 9988777766654 11 2456889
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccccc
Q 024536 174 AEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 174 A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
|...|++| ...+....+|...|.+-+...++.++|..+|+++++.-|+++..+..|+.+....|+.+.|..+.
T Consensus 305 AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~ 377 (493)
T 2uy1_A 305 FRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALF 377 (493)
T ss_dssp HHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999 44334667777777666665568999999999999999999998888999988988888776443
No 219
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.72 E-value=8.6e-05 Score=80.26 Aligned_cols=93 Identities=16% Similarity=0.112 Sum_probs=77.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYF 213 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ 213 (266)
+.+++|.++|+++- .+..+. ..+.+..+++++|.++++++ +++.+|+.+|.++.. .|++++|+.+|
T Consensus 1063 glyEEAf~IYkKa~----~~~~A~----~VLie~i~nldrAiE~Aerv-----n~p~vWsqLAKAql~-~G~~kEAIdsY 1128 (1630)
T 1xi4_A 1063 ELFEEAFAIFRKFD----VNTSAV----QVLIEHIGNLDRAYEFAERC-----NEPAVWSQLAKAQLQ-KGMVKEAIDSY 1128 (1630)
T ss_pred CCHHHHHHHHHHcC----CHHHHH----HHHHHHHhhHHHHHHHHHhc-----CCHHHHHHHHHHHHh-CCCHHHHHHHH
Confidence 78999999999972 222221 23334568899999999876 779999999999876 89999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 214 DRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 214 ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
.+| +++..+...+.++.+.|++++|++
T Consensus 1129 iKA-----dD~say~eVa~~~~~lGkyEEAIe 1155 (1630)
T 1xi4_A 1129 IKA-----DDPSSYMEVVQAANTSGNWEELVK 1155 (1630)
T ss_pred Hhc-----CChHHHHHHHHHHHHcCCHHHHHH
Confidence 887 889999999999999999999995
No 220
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.58 E-value=0.00029 Score=58.04 Aligned_cols=95 Identities=14% Similarity=-0.066 Sum_probs=75.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEI--RGDFVKAEEYCGRAILAKPG-DGNVLSMYGDLIWINHKDAPRAK 210 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~--~gd~e~A~~~~erAL~ldP~-da~al~nla~ll~~~~gd~deAi 210 (266)
.+....++-|.+-+. +.-.+.+.++||+.|... ..+..+++.+++..+..+|. .-+.++.+|..+++ .|+|++|.
T Consensus 20 eeL~~lr~qY~~E~~-~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk-l~~Y~~Ar 97 (144)
T 1y8m_A 20 QQLEILRQQVVSEGG-PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAK 97 (144)
T ss_dssp HHHHHHHHHHHHTTS-TTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT-TTCHHHHH
T ss_pred HHHHHHHHHHHHhcc-CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH-hhhHHHHH
Confidence 455666666665422 466789999999988532 23567899999999999995 55788889988887 79999999
Q ss_pred HHHHHHHHhCCCCHHHHHHH
Q 024536 211 SYFDRAVHSAPDDCHVLASY 230 (266)
Q Consensus 211 ~~~ekAL~l~P~da~a~~~l 230 (266)
.|.+..|+.+|+|.++..-.
T Consensus 98 ~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 98 RYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp HHHHHHHHTCCCCHHHHHHH
T ss_pred HHHHHHHhcCCCcHHHHHHH
Confidence 99999999999998886433
No 221
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.57 E-value=0.00089 Score=55.88 Aligned_cols=101 Identities=15% Similarity=0.100 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 024536 136 SESMDVYYQEMIKAYPE--------DALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAP 207 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~--------~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~d 207 (266)
.++-...|++|++.-|- ...+|..||.+. ..+|.++|...|+.|+.+....+.+|..+|.+-.. +|+.+
T Consensus 35 l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~--ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiR-qgnl~ 111 (161)
T 4h7y_A 35 LNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK--AIQEPDDARDYFQMARANCKKFAFVHISFAQFELS-QGNVK 111 (161)
T ss_dssp HHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHH--HHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cccHH
Confidence 36777899999999885 357888888763 35899999999999999988889999999998766 89999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCc
Q 024536 208 RAKSYFDRAVHSAPDDCHVLASYARFLWDAGEE 240 (266)
Q Consensus 208 eAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~ 240 (266)
+|...+.+|+.+.|...+.+.. |.--.+.|..
T Consensus 112 kARkILg~AiG~~~k~~~~le~-a~~nl~~~~~ 143 (161)
T 4h7y_A 112 KSKQLLQKAVERGAVPLEMLEI-ALRNLNLQKK 143 (161)
T ss_dssp HHHHHHHHHHHTTCBCHHHHHH-HHHHHHTTCS
T ss_pred HHHHHHHHHhccCCCcHHHHHH-HHHhhhcCCC
Confidence 9999999999999998877543 2333444443
No 222
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.52 E-value=0.00027 Score=59.02 Aligned_cols=97 Identities=19% Similarity=0.163 Sum_probs=79.7
Q ss_pred HHHCCCCHHHHHHHHHHHHHHcCCH------HHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHHcCCHHHHHHH
Q 024536 147 IKAYPEDALVLANYAKFLKEIRGDF------VKAEEYCGRAILAKPGD--------GNVLSMYGDLIWINHKDAPRAKSY 212 (266)
Q Consensus 147 Lel~P~~~~al~nlA~~L~~~~gd~------e~A~~~~erAL~ldP~d--------a~al~nla~ll~~~~gd~deAi~~ 212 (266)
|-+.|++++.|.+|...+. ..|+. ++-...|+||+..-|-. ...|..||.+. . .+|.++|..+
T Consensus 6 ~~~~p~~yd~W~~yl~llE-~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~-e-i~D~d~aR~v 82 (161)
T 4h7y_A 6 IMMMANNPEDWLSLLLKLE-KNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK-A-IQEPDDARDY 82 (161)
T ss_dssp ----CCSHHHHHHHHHHHH-HHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHH-H-HHCGGGCHHH
T ss_pred eeeCCCCHHHHHHHHHHHH-HcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHH-H-hcCHHHHHHH
Confidence 3468999999999998775 45888 88899999999987753 35677788553 4 4899999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 213 FDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 213 ~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
|+.|+.+....+-+|..+|.|-..+|+...|.++
T Consensus 83 y~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkI 116 (161)
T 4h7y_A 83 FQMARANCKKFAFVHISFAQFELSQGNVKKSKQL 116 (161)
T ss_dssp HHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 9999999888999999999999999999988853
No 223
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.48 E-value=0.00034 Score=57.00 Aligned_cols=95 Identities=14% Similarity=-0.054 Sum_probs=74.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIR--GDFVKAEEYCGRAILAKPG-DGNVLSMYGDLIWINHKDAPRAK 210 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~--gd~e~A~~~~erAL~ldP~-da~al~nla~ll~~~~gd~deAi 210 (266)
.+....++-|.+=+ ...-.+.+.++||+.|.... .+..+++.+++..++.+|. .-+.++.+|+.+++ .|+|++|.
T Consensus 21 eeL~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yk-lgdY~~Ar 98 (134)
T 3o48_A 21 QQLEILRQQVVSEG-GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAK 98 (134)
T ss_dssp HHHHHHHHHHHHTT-GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-HTCHHHHH
T ss_pred HHHHHHHHHHHHHh-CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH-hhhHHHHH
Confidence 45566666665544 33346789999999885322 3567899999999999995 46889999999988 69999999
Q ss_pred HHHHHHHHhCCCCHHHHHHH
Q 024536 211 SYFDRAVHSAPDDCHVLASY 230 (266)
Q Consensus 211 ~~~ekAL~l~P~da~a~~~l 230 (266)
.+.+++++++|+|.+|..-.
T Consensus 99 ~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 99 RYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp HHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHhhCCCCHHHHHHH
Confidence 99999999999999886433
No 224
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.42 E-value=8.7e-05 Score=71.51 Aligned_cols=78 Identities=13% Similarity=0.024 Sum_probs=40.2
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHHHcCCc
Q 024536 167 IRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINH-KDAPRAKSYFDRAVHSAP-----DDCHVLASYARFLWDAGEE 240 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~-gd~deAi~~~ekAL~l~P-----~da~a~~~lA~ll~~~G~~ 240 (266)
..|.+++|..++++++.+++.+..++..+|+++.+.+ ++..++++.|...+.+.| .++..|..+..+|.+.+++
T Consensus 219 k~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~ 298 (449)
T 1b89_A 219 DRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEY 298 (449)
T ss_dssp HTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCH
T ss_pred HCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchH
Confidence 3455555555555555555555555555555443221 233444444444555555 4555555555555555665
Q ss_pred cccc
Q 024536 241 EDDD 244 (266)
Q Consensus 241 ~eA~ 244 (266)
+.|+
T Consensus 299 d~A~ 302 (449)
T 1b89_A 299 DNAI 302 (449)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5555
No 225
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.32 E-value=0.00053 Score=66.04 Aligned_cols=92 Identities=10% Similarity=0.059 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH------------
Q 024536 132 SGKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLI------------ 199 (266)
Q Consensus 132 ~~~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll------------ 199 (266)
..+.+++|..+|.++ ..|..+|.++. ..|++++|.+.|++| +++.+|.....++
T Consensus 134 ~~g~yeeA~~~Y~~a--------~n~~~LA~~L~-~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~ 199 (449)
T 1b89_A 134 DEKMYDAAKLLYNNV--------SNFGRLASTLV-HLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMC 199 (449)
T ss_dssp ---CTTTHHHHHHHT--------TCHHHHHHHHH-TTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHT
T ss_pred HcCCHHHHHHHHHHh--------hhHHHHHHHHH-HhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHH
Confidence 346777888888766 35666777665 467788888877777 3555544433222
Q ss_pred -----------------HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 024536 200 -----------------WINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDA 237 (266)
Q Consensus 200 -----------------~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~ 237 (266)
++..|++++|+.++++++.+++....++..+|.++.+-
T Consensus 200 ~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 200 GLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp TTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 23357777777777777777777777777776665543
No 226
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.80 E-value=0.0056 Score=59.52 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 024536 156 VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLW 235 (266)
Q Consensus 156 al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~ 235 (266)
.+.++|++.. .+..+..|..+|.+|+.++|++...|+.+|++... +++.-+|+-||-|++......+.+..++..++-
T Consensus 154 ~l~~LGDL~R-Y~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~-~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 154 CLVHLGDIAR-YRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS-KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH-TTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHcccHHH-HHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc-ccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 4566787654 56889999999999999999999999999987754 899999999999999999889999999998877
Q ss_pred Hc
Q 024536 236 DA 237 (266)
Q Consensus 236 ~~ 237 (266)
..
T Consensus 232 ~~ 233 (497)
T 1ya0_A 232 KA 233 (497)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 227
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.74 E-value=0.0062 Score=51.23 Aligned_cols=97 Identities=11% Similarity=0.013 Sum_probs=62.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCC-------------
Q 024536 134 KESESMDVYYQEMIKAYPEDAL---------VLANYAKFLKEIRGDFVKAEEYCGRAILAK---PGD------------- 188 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~---------al~nlA~~L~~~~gd~e~A~~~~erAL~ld---P~d------------- 188 (266)
+.|+.|+.++..++.+..++++ ++..+|+.++ .+++|.+|+.+|++||.+. +.+
T Consensus 34 ~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf-~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~ 112 (167)
T 3ffl_A 34 GLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLF-HDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSAST 112 (167)
T ss_dssp TCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHCC----------------
T ss_pred hhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCC
Confidence 6899999999887777544443 7788899887 5899999999999997742 212
Q ss_pred ---------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 024536 189 ---------GNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARF 233 (266)
Q Consensus 189 ---------a~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~l 233 (266)
.++.+.++.++.. .+++++|+..++..-. .-..+.+...||.+
T Consensus 113 p~s~~~~~e~Elkykia~C~~~-l~~~~~Ai~~Le~Ip~-k~Rt~kvnm~LakL 164 (167)
T 3ffl_A 113 PQSQCLPSEIEVKYKLAECYTV-LKQDKDAIAILDGIPS-RQRTPKINMLLANL 164 (167)
T ss_dssp ----CCCCHHHHHHHHHHHHHH-TTCHHHHHHHHHTSCG-GGCCHHHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHHHH-HCCHHHHHHHHhcCCc-hhcCHHHHHHHHHH
Confidence 2455566665554 5566666666554211 11234444444444
No 228
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.69 E-value=0.0045 Score=52.09 Aligned_cols=79 Identities=13% Similarity=0.068 Sum_probs=64.5
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----------------
Q 024536 167 IRGDFVKAEEYCGRAILAKPGDGN---------VLSMYGDLIWINHKDAPRAKSYFDRAVHSAP---------------- 221 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~ldP~da~---------al~nla~ll~~~~gd~deAi~~~ekAL~l~P---------------- 221 (266)
..+.|+-|+.....++.+..++++ ++..+|.+++. +++|.+|+.+|++||.+.-
T Consensus 32 d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~s 110 (167)
T 3ffl_A 32 AAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSA 110 (167)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHCC--------------
T ss_pred HhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHhcCCCccccccccC
Confidence 468999999999998887644444 78889999988 8999999999999865432
Q ss_pred ---------CCHHHHHHHHHHHHHcCCccccccc
Q 024536 222 ---------DDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 222 ---------~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
.+.++.+.+|.++.+.+++++|+.+
T Consensus 111 s~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~ 144 (167)
T 3ffl_A 111 STPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAI 144 (167)
T ss_dssp ------CCCCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCcccccccchHHHHHHHHHHHHHHCCHHHHHHH
Confidence 1236889999999999999999954
No 229
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.57 E-value=0.025 Score=51.08 Aligned_cols=62 Identities=27% Similarity=0.248 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla 196 (266)
+.+++|++.+...|+.+|.|+.....|-.+|. ..|++++|.+-++-+.+++|+.......|-
T Consensus 11 g~L~~al~~~~~~VR~~P~da~~R~~LfqLLc-v~G~w~RA~~QL~~~a~l~p~~~~~a~~yr 72 (273)
T 1zbp_A 11 GQLQQALELLIEAIKASPKDASLRSSFIELLC-IDGDFERADEQLMQSIKLFPEYLPGASQLR 72 (273)
T ss_dssp TCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCchhhHHHHHHH
Confidence 57899999999999999999999999998887 689999999999999999999876544443
No 230
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.57 E-value=0.034 Score=53.50 Aligned_cols=111 Identities=14% Similarity=-0.044 Sum_probs=86.7
Q ss_pred CCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPE-DALVLANYAKFLKEIRGDFVKAEEYCGRAILAK--PGDGNVLSMYGDLIWINHKDAPRAK 210 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~-~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ld--P~da~al~nla~ll~~~~gd~deAi 210 (266)
+..++|.++|+++.+..-. |...|+.+-..+. ..|++++|..+|++..+.. | |...|..+-..+.+ .|+.++|.
T Consensus 84 ~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~-~g~~~~A~ 160 (501)
T 4g26_A 84 PGLSRGFDIFKQMIVDKVVPNEATFTNGARLAV-AKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCR-KGDADKAY 160 (501)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHH-TTCHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHH-CCCHHHHH
Confidence 4689999999999887432 5566666655554 5799999999999998863 5 46666666666655 89999999
Q ss_pred HHHHHHHHhCC-CCHHHHHHHHHHHHHcCCcccccccc
Q 024536 211 SYFDRAVHSAP-DDCHVLASYARFLWDAGEEEDDDDGD 247 (266)
Q Consensus 211 ~~~ekAL~l~P-~da~a~~~lA~ll~~~G~~~eA~~~~ 247 (266)
.+|++..+..- -+...+..+..++.+.|+.++|.+.-
T Consensus 161 ~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 161 EVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHH
Confidence 99999988643 25667888999999999999999653
No 231
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.47 E-value=0.0038 Score=50.20 Aligned_cols=67 Identities=12% Similarity=0.034 Sum_probs=55.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHC-C-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 024536 129 DGDSGKESESMDVYYQEMIKAY-P-EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (266)
Q Consensus 129 ~~~~~~~~eeA~~~y~rALel~-P-~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla 196 (266)
+.....+..+++.+++..+..+ | ..-+.++.+|...+ ..|+|++|..+++..|+.+|+|..+.....
T Consensus 47 ~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~y-klg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 47 RTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp TSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3345567788999999999987 6 56688999998777 589999999999999999999999876444
No 232
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.017 Score=58.94 Aligned_cols=109 Identities=13% Similarity=0.055 Sum_probs=77.8
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH--------hCCCCHH----------HHHHH
Q 024536 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEI-RGDFVKAEEYCGRAIL--------AKPGDGN----------VLSMY 195 (266)
Q Consensus 135 ~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~-~gd~e~A~~~~erAL~--------ldP~da~----------al~nl 195 (266)
-++.|+.++++..+.+|.....+...-..+... ..+--+|.....++++ +.+.+.. .+..=
T Consensus 264 ~~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Q 343 (754)
T 4gns_B 264 LVDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQ 343 (754)
T ss_dssp GHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHH
Confidence 368899999999999998764332221111111 1223456666666664 2344432 33333
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccc
Q 024536 196 GDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 196 a~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~ 244 (266)
+.++.. +++++-|+.+-++|+...|.+-..|+.|+.+|..+|+++.|+
T Consensus 344 a~FLl~-K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~AL 391 (754)
T 4gns_B 344 TNFLLN-RGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKAL 391 (754)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhc-cCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHH
Confidence 555655 899999999999999999999999999999999999999998
No 233
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.95 E-value=0.076 Score=51.03 Aligned_cols=115 Identities=9% Similarity=-0.004 Sum_probs=83.8
Q ss_pred CCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH--------HcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPE-DALVLANYAKFLKE--------IRGDFVKAEEYCGRAILAK--PGDGNVLSMYGDLIWIN 202 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~-~~~al~nlA~~L~~--------~~gd~e~A~~~~erAL~ld--P~da~al~nla~ll~~~ 202 (266)
++.++|.++|+++.+..-. +...|+.+=.++.. ..+++++|.+.|++..... | |...|..+...+.+
T Consensus 40 G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~P-d~~tyn~lI~~~~~- 117 (501)
T 4g26_A 40 GDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVP-NEATFTNGARLAVA- 117 (501)
T ss_dssp CCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHh-
Confidence 6899999999999987422 33444433222210 0123789999999988864 4 56677777777766
Q ss_pred cCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCccccccccccc
Q 024536 203 HKDAPRAKSYFDRAVHSA-PDDCHVLASYARFLWDAGEEEDDDDGDDQE 250 (266)
Q Consensus 203 ~gd~deAi~~~ekAL~l~-P~da~a~~~lA~ll~~~G~~~eA~~~~~~~ 250 (266)
.|++++|+.+|++..+.. .-+...+..+-..|...|+.++|.++.+.+
T Consensus 118 ~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 118 KDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp HTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHH
Confidence 799999999999988763 225677888889999999999999775443
No 234
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.67 E-value=0.045 Score=44.90 Aligned_cols=65 Identities=9% Similarity=0.009 Sum_probs=55.0
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 024536 131 DSGKESESMDVYYQEMIKAYPED-ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (266)
Q Consensus 131 ~~~~~~eeA~~~y~rALel~P~~-~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla 196 (266)
....+..+++.+++..+..+|.. -+.++.+|...+ ..|+|++|.++.+..|+.+|+|..+.....
T Consensus 53 ~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~y-kl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 53 TDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp SSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHH-HhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 34567889999999999999954 578888888776 589999999999999999999998875433
No 235
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.67 E-value=0.034 Score=45.09 Aligned_cols=65 Identities=9% Similarity=0.009 Sum_probs=55.3
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 024536 131 DSGKESESMDVYYQEMIKAYPED-ALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYG 196 (266)
Q Consensus 131 ~~~~~~eeA~~~y~rALel~P~~-~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla 196 (266)
....+..+++.++...++.+|.. -+.++.+|...+ ..|+|++|.++.++.|+..|+|..+.....
T Consensus 54 ~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~y-klgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~ 119 (134)
T 3o48_A 54 TDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKS 119 (134)
T ss_dssp SCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 34467889999999999999954 678888888776 579999999999999999999999876444
No 236
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.09 E-value=0.22 Score=46.20 Aligned_cols=83 Identities=8% Similarity=0.008 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHH----------------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDAL----------------------VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNV 191 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~----------------------al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~a 191 (266)
++.++|.+.|++|+.+.-..+. ++..++.++. ..|++++|...+++++..+|-+-.+
T Consensus 129 ~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l-~~g~~~~a~~~l~~~~~~~P~~E~~ 207 (388)
T 2ff4_A 129 GRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEI-ACGRASAVIAELEALTFEHPYREPL 207 (388)
T ss_dssp TCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHH
Confidence 3567777888888887533211 1111222222 4799999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 192 LSMYGDLIWINHKDAPRAKSYFDRAVH 218 (266)
Q Consensus 192 l~nla~ll~~~~gd~deAi~~~ekAL~ 218 (266)
|..+-.+++. .|+..+|+..|+++..
T Consensus 208 ~~~lm~al~~-~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 208 WTQLITAYYL-SDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 9888888866 7999999999998755
No 237
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.66 E-value=0.1 Score=53.22 Aligned_cols=59 Identities=14% Similarity=0.017 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024536 156 VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRA 216 (266)
Q Consensus 156 al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekA 216 (266)
++..-+.||. .+++++-|+.+.++|+.+.|.+-..|+.|+.+|.. .+||+.|+-.+.-+
T Consensus 339 LL~~Qa~FLl-~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~-l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLL-NRGDYELALGVSNTSTELALDSFESWYNLARCHIK-KEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-TTCHHHHHHHHHHS
T ss_pred HHHHHHHHHh-ccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHH-hccHHHHHHHHhcC
Confidence 4444567776 58999999999999999999999999999999977 79999999665544
No 238
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.60 E-value=0.099 Score=50.73 Aligned_cols=66 Identities=15% Similarity=0.193 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIW 200 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~ 200 (266)
..+..|..+|++|+.++|++...|+.+|.+.. ..++.-+|.-+|-|++....-.+.+..|+..++.
T Consensus 166 ~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~-~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 166 NQTSQAESYYRHAAQLVPSNGQPYNQLAILAS-SKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp TCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHH-HTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHh-cccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 56789999999999999999999999998665 5789999999999999987778888888876654
No 239
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.53 E-value=0.17 Score=45.55 Aligned_cols=63 Identities=24% Similarity=0.258 Sum_probs=55.6
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 024536 167 IRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASY 230 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~l 230 (266)
..+++++|++..+..|+.+|.|+.....|..++.- .|++++|..-++.+.+++|+.......|
T Consensus 9 ~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv-~G~w~RA~~QL~~~a~l~p~~~~~a~~y 71 (273)
T 1zbp_A 9 SEGQLQQALELLIEAIKASPKDASLRSSFIELLCI-DGDFERADEQLMQSIKLFPEYLPGASQL 71 (273)
T ss_dssp TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCchhhHHHHHH
Confidence 36899999999999999999999999888887765 7999999999999999999876654444
No 240
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.48 E-value=0.13 Score=50.01 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=56.6
Q ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH--------HHhCCCCHHHHHHHHHH------------HHHHcCCHHHH
Q 024536 150 YPEDALVLANYAKFLKEIRGDFVKAEEYCGRA--------ILAKPGDGNVLSMYGDL------------IWINHKDAPRA 209 (266)
Q Consensus 150 ~P~~~~al~nlA~~L~~~~gd~e~A~~~~erA--------L~ldP~da~al~nla~l------------l~~~~gd~deA 209 (266)
..+++..|.++|.++. ..++++.|+.+|.++ |.....+.+.+..++.. ++...|++++|
T Consensus 677 ~~~~~~~W~~la~~al-~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a 755 (814)
T 3mkq_A 677 DESAEMKWRALGDASL-QRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGA 755 (814)
T ss_dssp TCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHH
T ss_pred hhCcHhHHHHHHHHHH-HcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHH
Confidence 4467888999998765 589999999999885 22224444433333221 22225677777
Q ss_pred HHHHHH------HHH----hCCCC---HHHHHHHHHHHHHcCCcccccc
Q 024536 210 KSYFDR------AVH----SAPDD---CHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 210 i~~~ek------AL~----l~P~d---a~a~~~lA~ll~~~G~~~eA~~ 245 (266)
+++|.+ |+. ..|.. +.+...++.-+...|+.+.|..
T Consensus 756 ~~~~~~~~~~~~A~~lA~~~~~~~~~i~~~~~~~~~~L~~~~~~~~a~~ 804 (814)
T 3mkq_A 756 KDLLIKSQRFSEAAFLGSTYGLGDNEVNDIVTKWKENLILNGKNTVSER 804 (814)
T ss_dssp HHHHHHTTCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHHHHTT
T ss_pred HHHHHHcCChHHHHHHHHHhCCChHHHHHHHHHHHHHHHhccchhHHHh
Confidence 776644 332 33433 2456667766777776544443
No 241
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.34 E-value=0.38 Score=44.53 Aligned_cols=51 Identities=6% Similarity=-0.022 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccccccc
Q 024536 195 YGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 195 la~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
++.++.. .|++++|+..+++++..+|-+-.++..+-.+|...|+..+|+++
T Consensus 177 ~~~~~l~-~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~ 227 (388)
T 2ff4_A 177 KAEAEIA-CGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGA 227 (388)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHH-CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3344444 79999999999999999999999999999999999999999854
No 242
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.95 E-value=1 Score=43.77 Aligned_cols=43 Identities=16% Similarity=0.095 Sum_probs=33.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024536 168 RGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRA 216 (266)
Q Consensus 168 ~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekA 216 (266)
.|++++|.+++ ...++...|..+|..+.+ +++++.|+.+|.++
T Consensus 665 ~~~~~~A~~~~-----~~~~~~~~W~~la~~al~-~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 665 VGQLTLARDLL-----TDESAEMKWRALGDASLQ-RFNFKLAIEAFTNA 707 (814)
T ss_dssp HTCHHHHHHHH-----TTCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHH-----HhhCcHhHHHHHHHHHHH-cCCHHHHHHHHHHc
Confidence 35566665543 345788999999998876 89999999999986
No 243
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.45 E-value=2.3 Score=44.76 Aligned_cols=98 Identities=14% Similarity=-0.003 Sum_probs=71.2
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---C--------------------CCCHHHHHHHHHHHHH
Q 024536 145 EMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA---K--------------------PGDGNVLSMYGDLIWI 201 (266)
Q Consensus 145 rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l---d--------------------P~da~al~nla~ll~~ 201 (266)
..+..-|.++-.-+.+|.++. ..|++++|..+|++|-.- + ..-+..|..... +++
T Consensus 833 ~l~~~~~~~~~~~yl~g~~~L-~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~-LFe 910 (1139)
T 4fhn_B 833 QLIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSK-KLF 910 (1139)
T ss_dssp HHHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHH-HHH
T ss_pred HHhhhccCCcHHHHHHHHHHH-hcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHH-HHH
Confidence 344567888877788888776 589999999999987321 0 111233444444 445
Q ss_pred HcCCHHHHHHHHHHHHHhCC-CCHH----HHHHHHHHHHHcCCccccc
Q 024536 202 NHKDAPRAKSYFDRAVHSAP-DDCH----VLASYARFLWDAGEEEDDD 244 (266)
Q Consensus 202 ~~gd~deAi~~~ekAL~l~P-~da~----a~~~lA~ll~~~G~~~eA~ 244 (266)
..+.++-|+++.+.||+..+ ++.. .|.++-....+.+++++|-
T Consensus 911 ~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay 958 (1139)
T 4fhn_B 911 EESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAH 958 (1139)
T ss_dssp HTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGG
T ss_pred HcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHH
Confidence 58999999999999999876 4442 5667778889999999996
No 244
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=88.27 E-value=5.1 Score=33.57 Aligned_cols=42 Identities=10% Similarity=0.023 Sum_probs=33.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRA 181 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erA 181 (266)
++++.|.+..+.. ++...|..+|.... ..|+++-|+.+|.++
T Consensus 19 g~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL-~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 19 GNLDAALDEAKKL-----NDSITWERLIQEAL-AQGNASLAEMIYQTQ 60 (177)
T ss_dssp TCHHHHHHHHHHH-----CCHHHHHHHHHHHH-HTTCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHh-----CCHHHHHHHHHHHH-HcCChHHHHHHHHHh
Confidence 5777777776654 78889999998765 579999999999875
No 245
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=86.40 E-value=1.6 Score=38.37 Aligned_cols=47 Identities=21% Similarity=0.195 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHH-----HCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 137 ESMDVYYQEMIK-----AYPEDAL---VLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 137 eeA~~~y~rALe-----l~P~~~~---al~nlA~~L~~~~gd~e~A~~~~erAL~ 183 (266)
++|..+|++|++ +.|.||. +..|++.|+++..++.++|..+.++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345555555553 3455552 3345555555555665555555555443
No 246
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=86.19 E-value=1.6 Score=38.40 Aligned_cols=48 Identities=21% Similarity=0.245 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHH-----HCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 136 SESMDVYYQEMIK-----AYPEDAL---VLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 136 ~eeA~~~y~rALe-----l~P~~~~---al~nlA~~L~~~~gd~e~A~~~~erAL~ 183 (266)
.+.|...|++|++ +.|.||. +..|++.|+++..++.++|....++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566667777654 4566763 4466677777767777776666665543
No 247
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=85.78 E-value=1.7 Score=38.76 Aligned_cols=47 Identities=19% Similarity=0.195 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHH----HCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 137 ESMDVYYQEMIK----AYPEDAL---VLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 137 eeA~~~y~rALe----l~P~~~~---al~nlA~~L~~~~gd~e~A~~~~erAL~ 183 (266)
++|..+|++|++ +.|.||. +..|++.|+++..++.++|..+.++|+.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345555555554 3444552 3345555555555555555555555543
No 248
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=85.52 E-value=3.6 Score=34.49 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024536 152 EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRA 216 (266)
Q Consensus 152 ~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekA 216 (266)
.|+...+.+|. ..|+++.|.++.+.. ++...|..+|..... +|+++-|+.+|+++
T Consensus 6 ~D~~~rF~LAL----~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~-~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 6 QDPHIRFDLAL----EYGNLDAALDEAKKL-----NDSITWERLIQEALA-QGNASLAEMIYQTQ 60 (177)
T ss_dssp SCHHHHHHHHH----HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHH-TTCHHHHHHHHHHT
T ss_pred CChHHHHHHHH----hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHH-cCChHHHHHHHHHh
Confidence 45666667764 479999999988765 778899999988766 89999999988875
No 249
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=85.50 E-value=1.8 Score=38.32 Aligned_cols=24 Identities=29% Similarity=0.295 Sum_probs=10.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Q 024536 158 ANYAKFLKEIRGDFVKAEEYCGRA 181 (266)
Q Consensus 158 ~nlA~~L~~~~gd~e~A~~~~erA 181 (266)
.|++.|+++..++.++|..+.++|
T Consensus 177 LNfSVFyYEIln~~~~Ac~lAk~A 200 (248)
T 3uzd_A 177 LNYSVFYYEIQNAPEQACHLAKTA 200 (248)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 444444444444444444444443
No 250
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=85.45 E-value=4.5 Score=36.00 Aligned_cols=48 Identities=10% Similarity=0.001 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHH----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 172 VKAEEYCGRAIL----AKPGDGN---VLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 172 e~A~~~~erAL~----ldP~da~---al~nla~ll~~~~gd~deAi~~~ekAL~l 219 (266)
++|...|+.|+. +.|.||- ...|+++++++..++.++|..+.++|+.-
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 227 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEM 227 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 678889999986 5677773 45578899999899999999999988863
No 251
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=85.10 E-value=1.9 Score=38.42 Aligned_cols=46 Identities=22% Similarity=0.243 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHH-----HCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 024536 137 ESMDVYYQEMIK-----AYPEDAL---VLANYAKFLKEIRGDFVKAEEYCGRAI 182 (266)
Q Consensus 137 eeA~~~y~rALe-----l~P~~~~---al~nlA~~L~~~~gd~e~A~~~~erAL 182 (266)
++|..+|+.|++ +.|.||. +..|++.|+++..++.++|..+.++|+
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 455566666653 3556653 335566666666666666666555554
No 252
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=84.88 E-value=4.2 Score=35.68 Aligned_cols=48 Identities=10% Similarity=0.012 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 171 FVKAEEYCGRAIL-----AKPGDGN---VLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (266)
Q Consensus 171 ~e~A~~~~erAL~-----ldP~da~---al~nla~ll~~~~gd~deAi~~~ekAL~ 218 (266)
.+.|...|++|+. +.|.||- ...|+++++++..++.++|..+.++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3678888988875 6788884 4557889999989999999998888764
No 253
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=84.71 E-value=5.1 Score=35.64 Aligned_cols=48 Identities=10% Similarity=-0.034 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 172 VKAEEYCGRAIL-----AKPGDGN---VLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 172 e~A~~~~erAL~-----ldP~da~---al~nla~ll~~~~gd~deAi~~~ekAL~l 219 (266)
+.|...|+.|+. +.|.||- ...|++++++...++.++|..+.++|+.-
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 678889998885 5788884 45578899999899999999988888753
No 254
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=84.61 E-value=4.6 Score=35.29 Aligned_cols=48 Identities=15% Similarity=-0.009 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 136 SESMDVYYQEMIKA-----YPEDA---LVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 136 ~eeA~~~y~rALel-----~P~~~---~al~nlA~~L~~~~gd~e~A~~~~erAL~ 183 (266)
.+.|..+|+.|+++ .|.|| -+..|++.|+++..++.++|..+.++|+.
T Consensus 141 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 141 LEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 78889999988764 45555 56788888888888999999999999876
No 255
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=84.12 E-value=2.3 Score=37.99 Aligned_cols=46 Identities=22% Similarity=0.228 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHH-----HCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 024536 137 ESMDVYYQEMIK-----AYPEDAL---VLANYAKFLKEIRGDFVKAEEYCGRAI 182 (266)
Q Consensus 137 eeA~~~y~rALe-----l~P~~~~---al~nlA~~L~~~~gd~e~A~~~~erAL 182 (266)
+.|...|++|++ +.|.+|. +..|++.|+++..++.++|..+.++|+
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344555555543 3455552 334555555555555555555444443
No 256
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=83.91 E-value=5.8 Score=35.31 Aligned_cols=47 Identities=11% Similarity=-0.064 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 172 VKAEEYCGRAIL-----AKPGDGN---VLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (266)
Q Consensus 172 e~A~~~~erAL~-----ldP~da~---al~nla~ll~~~~gd~deAi~~~ekAL~ 218 (266)
+.|...|++|+. +.|.+|- ...|+++++++..++.++|..+.++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 678889988875 5688884 4557888999988999999998888765
No 257
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=83.67 E-value=16 Score=31.28 Aligned_cols=60 Identities=18% Similarity=0.139 Sum_probs=45.5
Q ss_pred HcCCHHHHHHHHHHHHH-----------------hCCCCHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 024536 167 IRGDFVKAEEYCGRAIL-----------------AKPGDGNVLSM-YGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVL 227 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~-----------------ldP~da~al~n-la~ll~~~~gd~deAi~~~ekAL~l~P~da~a~ 227 (266)
..+||.+|..+.+..|+ .||.|-+.+++ +|.++ .+.|+.++|+.+|.+.....|-.+.+-
T Consensus 74 klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~ll-tq~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 74 KKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLC-TLSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp HTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHH-HHhcCHHHhhhHhhhhcCCccccchHH
Confidence 57899999999999882 34667666554 56555 447999999999999999988766553
No 258
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=81.33 E-value=2 Score=38.51 Aligned_cols=47 Identities=26% Similarity=0.512 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHH-----H--CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 137 ESMDVYYQEMIK-----A--YPEDAL---VLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 137 eeA~~~y~rALe-----l--~P~~~~---al~nlA~~L~~~~gd~e~A~~~~erAL~ 183 (266)
++|...|++|++ + .|.+|. +..|++.|+++..++.++|..+.++|+.
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQ 225 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 444555555543 2 345542 2344555555555555555555555544
No 259
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.60 E-value=0.99 Score=42.29 Aligned_cols=110 Identities=14% Similarity=0.111 Sum_probs=67.8
Q ss_pred CCHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHH
Q 024536 134 KESESMDVYYQEMIKAY---PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD---GNVLSMYGDLIWINHKDAP 207 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~---P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d---a~al~nla~ll~~~~gd~d 207 (266)
...++-.+....+.+-+ ..-..++..+|.+++ ..||+++|.++|.++...-... .+++.....+... .+|+.
T Consensus 108 ~~l~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~-~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~-~~d~~ 185 (429)
T 4b4t_R 108 SKIKELNEKIQKLEEDDEGELEQAQAWINLGEYYA-QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF-YNDQL 185 (429)
T ss_dssp CCHHHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHH-HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hccHH
Confidence 34444444444444422 223457778888776 5789999999998888754332 2445555555544 57899
Q ss_pred HHHHHHHHHHHhCC--CCHH----HHHHHHHHHHHcCCcccccc
Q 024536 208 RAKSYFDRAVHSAP--DDCH----VLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 208 eAi~~~ekAL~l~P--~da~----a~~~lA~ll~~~G~~~eA~~ 245 (266)
.|..++++|..+.. .++. .....|.+++..+++.+|.+
T Consensus 186 ~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~ 229 (429)
T 4b4t_R 186 YVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAK 229 (429)
T ss_dssp HHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 99999998866532 2222 34455666777777777764
No 260
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=79.79 E-value=8.3 Score=38.16 Aligned_cols=79 Identities=13% Similarity=0.108 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 024536 137 ESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRA 216 (266)
Q Consensus 137 eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekA 216 (266)
.++...+.++....+++.......+..+ ..+|++.|..+|++.-......+...+.+|.++.. .|+.++|..+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~e~~~r~Al--r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~-~g~~~~a~~~~~~~ 345 (618)
T 1qsa_A 269 DEQAKWRDDAIMRSQSTSLIERRVRMAL--GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLE-RGREAEAKEILHQL 345 (618)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHH--HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred hHHHHHHHhccccCCChHHHHHHHHHHH--HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 4566666665554443333323333333 24777777777766554444556667777776644 67777777777777
Q ss_pred HH
Q 024536 217 VH 218 (266)
Q Consensus 217 L~ 218 (266)
..
T Consensus 346 a~ 347 (618)
T 1qsa_A 346 MQ 347 (618)
T ss_dssp HT
T ss_pred hc
Confidence 64
No 261
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=79.07 E-value=5.2 Score=34.98 Aligned_cols=47 Identities=11% Similarity=-0.064 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 172 VKAEEYCGRAIL-----AKPGDGN---VLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (266)
Q Consensus 172 e~A~~~~erAL~-----ldP~da~---al~nla~ll~~~~gd~deAi~~~ekAL~ 218 (266)
++|...|+.|+. +.|.||- ...|+++++++..++.++|..+.++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 678888998885 5788884 4557889999989999999999888876
No 262
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=76.61 E-value=6.7 Score=34.64 Aligned_cols=47 Identities=13% Similarity=0.057 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 172 VKAEEYCGRAIL-----AKPGDGN---VLSMYGDLIWINHKDAPRAKSYFDRAVH 218 (266)
Q Consensus 172 e~A~~~~erAL~-----ldP~da~---al~nla~ll~~~~gd~deAi~~~ekAL~ 218 (266)
+.|...|++|+. +.|.||- ...|++++++...++.++|..+.++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 678888988875 6788884 4557889999989999999998887765
No 263
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=75.43 E-value=21 Score=31.00 Aligned_cols=52 Identities=2% Similarity=-0.060 Sum_probs=43.1
Q ss_pred cCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 168 RGDFVKAEEYCGRAILA-----KPGDG---NVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 168 ~gd~e~A~~~~erAL~l-----dP~da---~al~nla~ll~~~~gd~deAi~~~ekAL~l 219 (266)
.|+.+.|...|+.|..+ .|.|| ....|+++++++..++.++|..+.++|+..
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 36678999999999873 45555 556789999999999999999999999774
No 264
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=74.64 E-value=17 Score=35.83 Aligned_cols=109 Identities=10% Similarity=0.056 Sum_probs=66.5
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHH--HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 024536 135 ESESMDVYYQEMIKAYPEDALVLANYAK-FLKE--IRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKS 211 (266)
Q Consensus 135 ~~eeA~~~y~rALel~P~~~~al~nlA~-~L~~--~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~ 211 (266)
+.+.|...|.+.....+-+......+-. +... ..+...++...+.+++....++.... .++..... .+|++.|..
T Consensus 229 d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~r~Alr-~~d~~~a~~ 306 (618)
T 1qsa_A 229 DAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIE-RRVRMALG-TGDRRGLNT 306 (618)
T ss_dssp CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHH-HHHHHHHH-HTCHHHHHH
T ss_pred CHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHH-HHHHHHHH-CCCHHHHHH
Confidence 4456666665554443333322222211 1110 12324677777777776555444433 33333334 589999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCcccccc
Q 024536 212 YFDRAVHSAPDDCHVLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 212 ~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA~~ 245 (266)
+|++.-......+.+.+-+|.++...|+.++|.+
T Consensus 307 ~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~ 340 (618)
T 1qsa_A 307 WLARLPMEAKEKDEWRYWQADLLLERGREAEAKE 340 (618)
T ss_dssp HHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHccccccccHhHHHHHHHHHHHcCCHHHHHH
Confidence 9988766545678888999999999999998874
No 265
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=74.31 E-value=5.9 Score=28.84 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ 183 (266)
.++|+.+.++|++. ...|++++|..+|.+||+
T Consensus 8 ~~~Ai~lv~~Ave~----------------D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 8 EDMARKYAILAVKA----------------DKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHHHH----------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----------------HHhccHHHHHHHHHHHHH
Confidence 35667777777664 234666666666555554
No 266
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=73.56 E-value=6.3 Score=28.80 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ 183 (266)
.++|+.+.++|++. ...|++++|..+|..||+
T Consensus 16 ~~~Ai~lv~~Ave~----------------D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 16 EEMARKYAINAVKA----------------DKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHHHH----------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----------------HHhccHHHHHHHHHHHHH
Confidence 35666666666654 234666666666655554
No 267
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=73.14 E-value=24 Score=30.11 Aligned_cols=89 Identities=13% Similarity=0.025 Sum_probs=59.6
Q ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH--Hh---------
Q 024536 151 PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAV--HS--------- 219 (266)
Q Consensus 151 P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL--~l--------- 219 (266)
|..++--..++.+|+ ..|+|.+|+-++ .+-+...+.+.-+.++.. .+|+.+|+..++..+ ++
T Consensus 30 ~~~~eY~lL~~I~Ly-yngEY~R~Lf~L-----~~lNT~Ts~YYk~LCy~k-lKdYkkA~~~le~il~~kvd~d~~~d~~ 102 (242)
T 3kae_A 30 PCKPEYRMLMSIVLY-LNGEYTRALFHL-----HKLNTCTSKYYESLCYKK-KKDYKKAIKSLESILEGKVERDPDVDAR 102 (242)
T ss_dssp ----CTHHHHHHHHH-HTTCHHHHHHHH-----HTCCBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSBCCCCCCHH
T ss_pred cCChHHHhhhhhhhh-hcchHhHHHHHH-----HhcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcccccCcccccc
Confidence 333333444556665 478888887643 344556655555555544 899999999999999 22
Q ss_pred ------CCCCHHH-HHHHHHHHHHcCCccccccc
Q 024536 220 ------APDDCHV-LASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 220 ------~P~da~a-~~~lA~ll~~~G~~~eA~~~ 246 (266)
+|.|.+. ...+|.++.+.|.-+||+.+
T Consensus 103 ~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y 136 (242)
T 3kae_A 103 IQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGH 136 (242)
T ss_dssp HHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cceeeeccchHHHHHHHHHHHHHHhcCHHHhhhH
Confidence 3555554 55789999999999999964
No 268
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=72.77 E-value=6.5 Score=28.72 Aligned_cols=44 Identities=18% Similarity=0.071 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 024536 171 FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (266)
Q Consensus 171 ~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~d 223 (266)
.++|..+..+|++.|-.- ++..++. -|.+|+++|.+++...|+.
T Consensus 16 ~~~Ai~lv~~Ave~D~~g-----~y~eAl~----lY~~aie~l~~alk~e~d~ 59 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEG-----NAEEAIT----NYKKAIEVLAQLVSLYRDG 59 (83)
T ss_dssp HHHHHHHHHHHHHHHHTT-----CHHHHHH----HHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHHHHHhc-----cHHHHHH----HHHHHHHHHHHHHHHCCCH
Confidence 367888888887763221 1222221 1445566666666666544
No 269
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=72.68 E-value=6.6 Score=28.57 Aligned_cols=44 Identities=18% Similarity=0.110 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 024536 172 VKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDC 224 (266)
Q Consensus 172 e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da 224 (266)
++|..+..+|++.|-.- ++..++. -|..|+.+|.+++...|+..
T Consensus 9 ~~Ai~lv~~Ave~D~~g-----~y~eAl~----lY~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 9 DMARKYAILAVKADKEG-----KVEDAIT----YYKKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHHHTT-----CHHHHHH----HHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHHhc-----cHHHHHH----HHHHHHHHHHHHHHHCCCHH
Confidence 58888888887764221 2222221 14556667777777676543
No 270
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=70.39 E-value=5.6 Score=38.83 Aligned_cols=55 Identities=18% Similarity=0.276 Sum_probs=43.3
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 024536 167 IRGDFVKAEEYCGRAILAKPGD-------GNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDC 224 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~ldP~d-------a~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da 224 (266)
..+.+++|+.+..++. -|.. ...++.+|.++.. +++|.+|..++..|+...|.+.
T Consensus 243 ~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~-q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 243 NNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAI-QLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTSSCSCSS
T ss_pred ccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCcch
Confidence 4688999999999995 3432 3445567887755 8999999999999999998654
No 271
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=69.79 E-value=23 Score=32.99 Aligned_cols=109 Identities=10% Similarity=-0.018 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHCCCCHHHH------HHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCH----HHHHHHHHHHHHHc
Q 024536 136 SESMDVYYQEMIKAYPEDALVL------ANYAKFLKEIRGDFVKAEEYCGRAILA--KPGDG----NVLSMYGDLIWINH 203 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~~~~al------~nlA~~L~~~~gd~e~A~~~~erAL~l--dP~da----~al~nla~ll~~~~ 203 (266)
.+.-.+.+..+++-.-+.-..| ..+|.+++ ..|+|.+|.+++.+.+.- .-+|. +++..-..++.. .
T Consensus 75 ~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~-~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~-~ 152 (394)
T 3txn_A 75 TGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYF-DTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHA-L 152 (394)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH-h
Confidence 3555666677766444332222 26788776 589999999999998883 22232 334444445555 7
Q ss_pred CCHHHHHHHHHHHHHhC---CCCHH----HHHHHHHHHH-HcCCccccccc
Q 024536 204 KDAPRAKSYFDRAVHSA---PDDCH----VLASYARFLW-DAGEEEDDDDG 246 (266)
Q Consensus 204 gd~deAi~~~ekAL~l~---P~da~----a~~~lA~ll~-~~G~~~eA~~~ 246 (266)
+++.++..+|.+|.... +.++. +...-|.++. ..+++..|...
T Consensus 153 ~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~ 203 (394)
T 3txn_A 153 SNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSY 203 (394)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHH
Confidence 89999999999997765 23343 3556677777 78888888743
No 272
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=68.73 E-value=7.7 Score=34.67 Aligned_cols=49 Identities=20% Similarity=0.233 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHH-----h--CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 171 FVKAEEYCGRAIL-----A--KPGDGN---VLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 171 ~e~A~~~~erAL~-----l--dP~da~---al~nla~ll~~~~gd~deAi~~~ekAL~l 219 (266)
.+.|...|+.|+. + .|.+|- ...|+++++++..++.++|..+.++|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3678888988875 4 688874 35578889998899999999999999876
No 273
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=68.59 E-value=16 Score=34.40 Aligned_cols=66 Identities=20% Similarity=0.091 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 152 EDALVLANYAKFLKEIR--GDFVKAEEYCGRAILAK-----PGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 152 ~~~~al~nlA~~L~~~~--gd~e~A~~~~erAL~ld-----P~da~al~nla~ll~~~~gd~deAi~~~ekAL~l 219 (266)
..|.++.|||++- +.. .....++.+|.+||... -.+...|..+|.++++ .+++.+|+.++-.|-..
T Consensus 253 rYPmALgnLgDLE-e~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR-~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 253 TYPMAIANLGDLE-EISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYR-KKKYYEAIASWVDAGYV 325 (472)
T ss_dssp TCHHHHHHHHHHH-HHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHH-hcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhh-cchHHHHHHHHHHHHHH
Confidence 4577777777742 222 12234888999999853 4556677778887777 89999999988877654
No 274
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.94 E-value=23 Score=32.84 Aligned_cols=86 Identities=10% Similarity=0.029 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHHCCCC--H-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHH----HHHHHHHHHHcC
Q 024536 134 KESESMDVYYQEMIKAYPED--A-LVLANYAKFLKEIRGDFVKAEEYCGRAILAK--PGDGNVL----SMYGDLIWINHK 204 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~--~-~al~nlA~~L~~~~gd~e~A~~~~erAL~ld--P~da~al----~nla~ll~~~~g 204 (266)
|++++|.++|.++....... . .++.....+.. ..+|+..|..++.+|-.+- ..|+... ...|.+++ ..+
T Consensus 145 Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l-~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l-~~r 222 (429)
T 4b4t_R 145 GDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGF-FYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCL-AVR 222 (429)
T ss_dssp CCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGG-GTS
T ss_pred CCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHH-HhC
Confidence 57789999999998865443 2 44444444433 4699999999999997652 3333332 22333333 378
Q ss_pred CHHHHHHHHHHHHHhCC
Q 024536 205 DAPRAKSYFDRAVHSAP 221 (266)
Q Consensus 205 d~deAi~~~ekAL~l~P 221 (266)
+|.+|-.+|-.++.-..
T Consensus 223 ~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 223 NFKEAAKLLVDSLATFT 239 (429)
T ss_dssp CHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHhccCC
Confidence 99999999998876543
No 275
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.32 E-value=47 Score=34.21 Aligned_cols=81 Identities=15% Similarity=0.000 Sum_probs=55.4
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------------CCCCH--HHHHHHHHHHH
Q 024536 144 QEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA---------------------KPGDG--NVLSMYGDLIW 200 (266)
Q Consensus 144 ~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l---------------------dP~da--~al~nla~ll~ 200 (266)
+..+..-|.++-.-+-+|.++. ..|++++|..+|++|-.- .+... ..|.+... ++
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L-~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~-LF 907 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSK-KL 907 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHH-HH
T ss_pred HHHHhhcCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHH-HH
Confidence 4455667888877788888776 589999999999877521 11111 13333443 44
Q ss_pred HHcCCHHHHHHHHHHHHHhC-CCCHHH
Q 024536 201 INHKDAPRAKSYFDRAVHSA-PDDCHV 226 (266)
Q Consensus 201 ~~~gd~deAi~~~ekAL~l~-P~da~a 226 (266)
+..+-++-++...+.||... +++...
T Consensus 908 E~~~a~~~vi~fA~lAI~~~~~dd~~l 934 (950)
T 4gq2_M 908 FEESAYIDALEFSLLADASKETDDEDL 934 (950)
T ss_dssp HHTTCHHHHHHHHHHHHHTCCSCCHHH
T ss_pred HhcCCHHHHHHHHHHHHhhcccCCccc
Confidence 55889999999999999754 566653
No 276
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=66.17 E-value=85 Score=29.18 Aligned_cols=85 Identities=9% Similarity=0.151 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHHHH-C-CCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCHHH---HHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA-Y-PED----ALVLANYAKFLKEIRGDFVKAEEYCGRAIL---AKPGDGNV---LSMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel-~-P~~----~~al~nlA~~L~~~~gd~e~A~~~~erAL~---ldP~da~a---l~nla~ll~~ 201 (266)
+++.+|...++....- . ..+ .+++..-..++. ..+|+.+|..++.++.. ..+.++.. ++.+...++.
T Consensus 151 g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l-~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~ 229 (445)
T 4b4t_P 151 GKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI-LKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISL 229 (445)
T ss_dssp TCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHH
Confidence 6788888888776532 1 111 133333344443 47999999999999742 34555432 3333333444
Q ss_pred HcCCHHHHHHHHHHHHHh
Q 024536 202 NHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 202 ~~gd~deAi~~~ekAL~l 219 (266)
..++|.+|-.+|..+...
T Consensus 230 ~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 230 HKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHCCHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhc
Confidence 579999999999999764
No 277
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=65.35 E-value=15 Score=27.14 Aligned_cols=16 Identities=6% Similarity=0.121 Sum_probs=12.9
Q ss_pred CCHHHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKA 149 (266)
Q Consensus 134 ~~~eeA~~~y~rALel 149 (266)
.-.++|+.++.+|++.
T Consensus 10 ~~l~~Ai~lv~~Ave~ 25 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVEL 25 (93)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3467899999999885
No 278
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=64.35 E-value=23 Score=30.29 Aligned_cols=93 Identities=10% Similarity=0.008 Sum_probs=64.6
Q ss_pred HHHHHHHHH---------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHH
Q 024536 141 VYYQEMIKA---------YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAK--PGDGNVLSMYGDLIWINHKDAPRA 209 (266)
Q Consensus 141 ~~y~rALel---------~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ld--P~da~al~nla~ll~~~~gd~deA 209 (266)
.++++++.. ||....+|..|+.++. .....++...|.-..... -..+..|-.+|.++.. +|++.+|
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~~--~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A 134 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLFL--SNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLEN-AQFFLEA 134 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhhc--ccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHHH
Confidence 466676664 4444577777877531 344678888888887755 5567778888887754 8999999
Q ss_pred HHHHHHHHHhCCCCHHH-HHHHHHHHHH
Q 024536 210 KSYFDRAVHSAPDDCHV-LASYARFLWD 236 (266)
Q Consensus 210 i~~~ekAL~l~P~da~a-~~~lA~ll~~ 236 (266)
..+|+++|.....-..- ...+..+..+
T Consensus 135 ~~Vy~~GI~~~A~P~~rL~~~~~~F~~R 162 (202)
T 3esl_A 135 KVLLELGAENNCRPYNRLLRSLSNYEDR 162 (202)
T ss_dssp HHHHHHHHHTTCBSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCccHHHHHHHHHHHHHH
Confidence 99999999988655443 3344444443
No 279
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=63.88 E-value=84 Score=33.45 Aligned_cols=84 Identities=6% Similarity=-0.160 Sum_probs=57.1
Q ss_pred CCHHHHHHHHHHHHH-----HCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHcCC-
Q 024536 134 KESESMDVYYQEMIK-----AYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA--KPGDGNVLSMYGDLIWINHKD- 205 (266)
Q Consensus 134 ~~~eeA~~~y~rALe-----l~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l--dP~da~al~nla~ll~~~~gd- 205 (266)
++.++|..+|+++-+ ..| |...|+.+-..+. ..|++++|.++|++..+. .|+ ...|..+-..+.+ .|+
T Consensus 141 G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glc-k~G~~~eA~~Lf~eM~~~G~~PD-vvTYntLI~glcK-~G~~ 216 (1134)
T 3spa_A 141 DQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWA-RQGAFKELVYVLFMVKDAGLTPD-LLSYAAALQCMGR-QDQD 216 (1134)
T ss_dssp TCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHH-HTCC
T ss_pred CCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHH-hCCCHHHHHHHHHHHHHcCCCCc-HHHHHHHHHHHHh-CCCc
Confidence 688999999977543 234 4555555544444 469999999999998875 464 5555555555555 455
Q ss_pred HHHHHHHHHHHHHhCC
Q 024536 206 APRAKSYFDRAVHSAP 221 (266)
Q Consensus 206 ~deAi~~~ekAL~l~P 221 (266)
.++|..+|++.....-
T Consensus 217 ~e~A~~Ll~EM~~kG~ 232 (1134)
T 3spa_A 217 AGTIERCLEQMSQEGL 232 (1134)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 5788899988887653
No 280
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=63.37 E-value=13 Score=27.58 Aligned_cols=16 Identities=13% Similarity=0.048 Sum_probs=7.1
Q ss_pred cCCHHHHHHHHHHHHH
Q 024536 168 RGDFVKAEEYCGRAIL 183 (266)
Q Consensus 168 ~gd~e~A~~~~erAL~ 183 (266)
.++|++|..+|..||+
T Consensus 28 ~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 28 ESRYQQALVCYQEGID 43 (93)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHH
Confidence 3444444444444433
No 281
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=63.13 E-value=23 Score=32.98 Aligned_cols=84 Identities=15% Similarity=0.083 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHHHCCC--CH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCHHHH---HHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPE--DA----LVLANYAKFLKEIRGDFVKAEEYCGRAILAK---PGDGNVL---SMYGDLIWI 201 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~--~~----~al~nlA~~L~~~~gd~e~A~~~~erAL~ld---P~da~al---~nla~ll~~ 201 (266)
++|.+|.+++.+.++.-.. +. +++..-..++. ..+++.++.++|.+|.... +-+|... ..++.++..
T Consensus 113 ~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~-~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l 191 (394)
T 3txn_A 113 ALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYH-ALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHA 191 (394)
T ss_dssp TCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHH
Confidence 6899999999998885322 22 22233333444 5799999999999997754 2344332 223334444
Q ss_pred -HcCCHHHHHHHHHHHHH
Q 024536 202 -NHKDAPRAKSYFDRAVH 218 (266)
Q Consensus 202 -~~gd~deAi~~~ekAL~ 218 (266)
..++|.+|-.+|-.|+.
T Consensus 192 ~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 192 ADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HTTSCHHHHHHHHHHHHH
T ss_pred HhccCHHHHHHHHHHHHh
Confidence 48999999999999974
No 282
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=63.04 E-value=12 Score=27.49 Aligned_cols=18 Identities=11% Similarity=0.054 Sum_probs=13.4
Q ss_pred HHcCCHHHHHHHHHHHHH
Q 024536 166 EIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 166 ~~~gd~e~A~~~~erAL~ 183 (266)
...|++++|..+|..||+
T Consensus 27 D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 356888888888877775
No 283
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=62.63 E-value=11 Score=29.25 Aligned_cols=34 Identities=9% Similarity=0.078 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (266)
Q Consensus 135 ~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l 184 (266)
-+++|+.++.+|++. ...++|++|+.+|..||++
T Consensus 14 ~l~kAi~lv~~Ave~----------------D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 14 NLQKAIDLASKAAQE----------------DKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHH----------------HHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----------------HHccCHHHHHHHHHHHHHH
Confidence 367888888888652 3569999999999988873
No 284
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=62.58 E-value=49 Score=25.49 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 024536 171 FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCH 225 (266)
Q Consensus 171 ~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~ 225 (266)
+++|..++.+|+..|- -.+|..++. -|..|+.+|.+++...+.+..
T Consensus 15 l~kAi~lv~~Ave~D~-----ag~y~eAl~----lY~~Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDK-----AGNYEEALQ----LYQHAVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHHHHHHH-----HTCHHHHHH----HHHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHHHHHH-----ccCHHHHHH----HHHHHHHHHHHHHHhccCCHH
Confidence 4678888888876532 123333332 267788888888888755544
No 285
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=62.44 E-value=24 Score=33.89 Aligned_cols=65 Identities=11% Similarity=0.085 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 152 EDALVLANYAKFLKEIR---GDFVKAEEYCGRAILAK-----PGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 152 ~~~~al~nlA~~L~~~~---gd~e~A~~~~erAL~ld-----P~da~al~nla~ll~~~~gd~deAi~~~ekAL~l 219 (266)
..|.++.|||.+- +.. |+ ..++.+|.+||... -.+...|..+|.++++ .+++.+|+.++-.|-..
T Consensus 275 rYPmALgnLgDLE-e~~pt~gr-~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR-~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 275 RYPMALGNLADLE-ELEPTPGR-PDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTATV 347 (550)
T ss_dssp TCHHHHHHHHHHH-HHSCCTTC-CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHh-hcCCCCCC-CCHHHHHHHHHHHHHHHhccCCccceeecchhhhh-cchHHHHHHHHHHHHHH
Confidence 4567777777642 221 22 35888999999853 4566777778888877 89999999998887664
No 286
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=61.90 E-value=43 Score=35.60 Aligned_cols=80 Identities=6% Similarity=-0.167 Sum_probs=58.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHH
Q 024536 162 KFLKEIRGDFVKAEEYCGRAIL-----AKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSA--PDDCHVLASYARFL 234 (266)
Q Consensus 162 ~~L~~~~gd~e~A~~~~erAL~-----ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~--P~da~a~~~lA~ll 234 (266)
..+. ..|++++|...|++... ..|+ ...|+.+-..+.. .|+.++|..+|++..+.. | |...+..+-..+
T Consensus 135 dglc-K~G~leeA~~Lf~eM~~m~~kG~~Pd-vvTYNtLI~Glck-~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI~gl 210 (1134)
T 3spa_A 135 KCCL-LTDQLPLAHHLLVVHHGQRQKRKLLT-LDMYNAVMLGWAR-QGAFKELVYVLFMVKDAGLTP-DLLSYAAALQCM 210 (1134)
T ss_dssp HHHH-HHTCHHHHHHHHHHHHHSHHHHTTCC-HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHH
T ss_pred HHHH-hCCCHHHHHHHHHHHHHHhhcCCCCC-HhHHHHHHHHHHh-CCCHHHHHHHHHHHHHcCCCC-cHHHHHHHHHHH
Confidence 3344 46999999999976543 3554 5667766666666 799999999999998754 5 556677777788
Q ss_pred HHcCCc-ccccc
Q 024536 235 WDAGEE-EDDDD 245 (266)
Q Consensus 235 ~~~G~~-~eA~~ 245 (266)
.+.|+. ++|.+
T Consensus 211 cK~G~~~e~A~~ 222 (1134)
T 3spa_A 211 GRQDQDAGTIER 222 (1134)
T ss_dssp HHHTCCHHHHHH
T ss_pred HhCCCcHHHHHH
Confidence 998885 55543
No 287
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=61.49 E-value=16 Score=26.37 Aligned_cols=34 Identities=9% Similarity=-0.106 Sum_probs=22.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ 183 (266)
.-.++|+.+..+|++. ...|++++|..+|..|++
T Consensus 8 ~~l~~A~~l~~~Av~~----------------D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 8 DFLTKGIELVQKAIDL----------------DTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp CHHHHHHHHHHHHHHH----------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----------------HHcCCHHHHHHHHHHHHH
Confidence 3467888888888764 234666666666666555
No 288
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=59.78 E-value=29 Score=33.21 Aligned_cols=66 Identities=9% Similarity=0.044 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 152 EDALVLANYAKFLKEIR--GDFVKAEEYCGRAILA-----KPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 152 ~~~~al~nlA~~L~~~~--gd~e~A~~~~erAL~l-----dP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l 219 (266)
..|.++.|||.+- +.. .....+..+|++||.. +-.+...|..+|..+++ .+++.+|+.++-.|-..
T Consensus 260 ~YPmALgnLgDLE-ei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R-~~~~~eAl~~wa~aa~V 332 (489)
T 4gq4_A 260 RYPMALGNLADLE-ELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTATV 332 (489)
T ss_dssp TCHHHHHHHHHHH-HHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred hcchhhhcccCHh-hcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHH-hhhHHHHHHHhhhhhhh
Confidence 4688888888853 222 1224578899999984 34455666667877776 78999999998887553
No 289
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=59.06 E-value=18 Score=26.08 Aligned_cols=44 Identities=16% Similarity=0.134 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 024536 171 FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDD 223 (266)
Q Consensus 171 ~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~d 223 (266)
+++|..+..+|+..|-. .++..++. -|..|+.+|.+++...|+.
T Consensus 10 l~~A~~l~~~Av~~D~~-----g~y~eAl~----~Y~~aie~l~~a~k~e~~~ 53 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTA-----TQYEEAYT----AYYNGLDYLMLALKYEKNP 53 (85)
T ss_dssp HHHHHHHHHHHHHHHHT-----TCHHHHHH----HHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHHHHHc-----CCHHHHHH----HHHHHHHHHHHHHHhCCCH
Confidence 46788888888754221 11222221 1444555555566556653
No 290
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=57.23 E-value=18 Score=26.51 Aligned_cols=45 Identities=9% Similarity=0.151 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 024536 135 ESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGD 188 (266)
Q Consensus 135 ~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~d 188 (266)
+-.+|+.+..+|++.+-. .+|..++. -|..|+++|..++...|+.
T Consensus 12 ~~~~A~~lv~~Ave~D~~-----g~y~eAl~----lY~~Aie~ll~alk~e~d~ 56 (86)
T 4a5x_A 12 QSTAAATVLKRAVELDSE-----SRYPQALV----CYQEGIDLLLQVLKGTKDN 56 (86)
T ss_dssp HHHHHHHHHHHHHHHHHT-----TCHHHHHH----HHHHHHHHHHHHHHTCCCH
T ss_pred HHHHHHHHHHHHHHHHHc-----CCHHHHHH----HHHHHHHHHHHHHhhCCCH
Confidence 345677777777776322 22222222 1467777888888777654
No 291
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=54.82 E-value=79 Score=25.99 Aligned_cols=53 Identities=17% Similarity=0.144 Sum_probs=40.1
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 024536 167 IRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSA 220 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~ 220 (266)
.+|.-++-.+.+...+.-++-+|+.+.-+|.+|.. -|+..+|.+++.+|-+.-
T Consensus 103 ~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~K-lg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 103 IQGKRDKLEEIGREILKNNEVSASILVAIANALRR-VGDERDATTLLIEACKKG 155 (172)
T ss_dssp HTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTT
T ss_pred HhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHH-hcchhhHHHHHHHHHHhh
Confidence 46777887777777766667778888888888865 688888888888887653
No 292
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=54.28 E-value=36 Score=29.41 Aligned_cols=87 Identities=7% Similarity=0.077 Sum_probs=57.9
Q ss_pred HHHHHHHHCC---------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHH
Q 024536 142 YYQEMIKAYP---------EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAK--PGDGNVLSMYGDLIWINHKDAPRAK 210 (266)
Q Consensus 142 ~y~rALel~P---------~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ld--P~da~al~nla~ll~~~~gd~deAi 210 (266)
++++++...- ....+|..|+.+ . +.+..+|.-..... -..+..|..+|.++.. +|++.+|.
T Consensus 99 lLErc~~~F~~~~rYknD~RyLklWl~Ya~~----~---~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~ 170 (223)
T 4aez_C 99 LLERCTREFVRNPLYKDDVRYLRIWMQYVNY----I---DEPVELFSFLAHHHIGQESSIFYEEYANYFES-RGLFQKAD 170 (223)
T ss_dssp HHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT----C---SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHHHHHHhcccccccCCHHHHHHHHHHHHc----c---CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHH-cCCHHHHH
Confidence 6666666533 334566666642 2 35667777777654 5567788888887754 89999999
Q ss_pred HHHHHHHHhCCCCHHH-HHHHHHHHHH
Q 024536 211 SYFDRAVHSAPDDCHV-LASYARFLWD 236 (266)
Q Consensus 211 ~~~ekAL~l~P~da~a-~~~lA~ll~~ 236 (266)
.+|+++|.....-..- ...+..|..+
T Consensus 171 ~Vy~~Gi~~~A~P~~rL~~~~~~F~~R 197 (223)
T 4aez_C 171 EVYQKGKRMKAKPFLRFQQKYQQFTHR 197 (223)
T ss_dssp HHHHHHHHHTCBSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCccHHHHHHHHHHHHHH
Confidence 9999999998765443 3345555444
No 293
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=53.60 E-value=1.1e+02 Score=28.34 Aligned_cols=87 Identities=9% Similarity=0.022 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCHH--
Q 024536 157 LANYAKFLKEIRGDFVKAEEYCGRAILA--KPGD----GNVLSMYGDLIWINHKDAPRAKSYFDRAV---HSAPDDCH-- 225 (266)
Q Consensus 157 l~nlA~~L~~~~gd~e~A~~~~erAL~l--dP~d----a~al~nla~ll~~~~gd~deAi~~~ekAL---~l~P~da~-- 225 (266)
...||.++. ..|++.+|...+.....- ...+ .+++..-..++.. .+|+.+|..+++++. .-.+.++.
T Consensus 140 ~~~La~i~e-~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~-~~d~~~a~~~~~ki~~~~~~~~~~~~lk 217 (445)
T 4b4t_P 140 TKDLVEIKK-EEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL-KGDYSQATVLSRKILKKTFKNPKYESLK 217 (445)
T ss_dssp HHHHHHHHH-HHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHH-HccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhcccCCcHHHH
Confidence 345677654 579999999998887642 1222 2444445555555 689999999999974 23444443
Q ss_pred --HHHHHHHHHHHcCCcccccc
Q 024536 226 --VLASYARFLWDAGEEEDDDD 245 (266)
Q Consensus 226 --a~~~lA~ll~~~G~~~eA~~ 245 (266)
++...|.++...+++.+|-+
T Consensus 218 ~~~~~~~~~~~~~e~~y~~a~~ 239 (445)
T 4b4t_P 218 LEYYNLLVKISLHKREYLEVAQ 239 (445)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHH
Confidence 45677888888888887763
No 294
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=51.48 E-value=14 Score=36.01 Aligned_cols=112 Identities=7% Similarity=-0.063 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHH-----------HHCCCCHHHHHHHHHHHHHHcCCHHHH----------HHHHHHHHH-----hCCC
Q 024536 134 KESESMDVYYQEMI-----------KAYPEDALVLANYAKFLKEIRGDFVKA----------EEYCGRAIL-----AKPG 187 (266)
Q Consensus 134 ~~~eeA~~~y~rAL-----------el~P~~~~al~nlA~~L~~~~gd~e~A----------~~~~erAL~-----ldP~ 187 (266)
+++++|.++-...+ .+|+=.+.+|+.|+.+. +..++.... ...+-.+++ .|++
T Consensus 150 k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~-e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D~~ 228 (523)
T 4b4t_S 150 KELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSH-ETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDNE 228 (523)
T ss_dssp ------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCSSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHH-HHhcccccccccccchhhHHHHHHHHHHHHhcccCcc
Confidence 56777777665554 12455567777776654 234544332 112222322 3444
Q ss_pred CHHHHHH-HHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCCcccccccccc
Q 024536 188 DGNVLSM-YGDLIWINHKDAPRAKSYFDRAVHSAPDD-------CHVLASYARFLWDAGEEEDDDDGDDQ 249 (266)
Q Consensus 188 da~al~n-la~ll~~~~gd~deAi~~~ekAL~l~P~d-------a~a~~~lA~ll~~~G~~~eA~~~~~~ 249 (266)
....+.| +-..|.. .+.++.|..+..++. .|.. +.+++.+|.++.-++++.+|.++-+.
T Consensus 229 ~qa~l~nllLRnYL~-~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~ 295 (523)
T 4b4t_S 229 TKAMLINLILRDFLN-NGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIA 295 (523)
T ss_dssp HHHHHHHHHHHHHHH-SSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHc-cCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3333333 4444444 789999999999996 4432 45677889999999999999865443
No 295
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=49.54 E-value=39 Score=28.23 Aligned_cols=34 Identities=21% Similarity=0.116 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 024536 156 VLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN 190 (266)
Q Consensus 156 al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~ 190 (266)
.++.+|.+.. .+++|.+|.+++.+|+..-|.+..
T Consensus 16 Y~YYlGr~~~-~~~~y~~A~~~L~~A~~~~~~~~~ 49 (203)
T 3t5x_A 16 YKYYVGRKAM-FDSDFKQAEEYLSFAFEHCHRSSQ 49 (203)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHH-HHhCHHHHHHHHHHHHHHCCHhHH
Confidence 4455677654 678999999999999998887653
No 296
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=46.70 E-value=36 Score=33.68 Aligned_cols=47 Identities=15% Similarity=0.151 Sum_probs=39.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcccc
Q 024536 196 GDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEEDD 243 (266)
Q Consensus 196 a~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~eA 243 (266)
|...+. .|+|..|.++.+.++..+|+|..++...|.+|.+.|.-.+.
T Consensus 456 a~~~~~-~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~~ 502 (658)
T 2cfu_A 456 ARASYA-RGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAEN 502 (658)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHH-CCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccC
Confidence 333344 69999999999999999999999999999999988865554
No 297
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=44.77 E-value=1.3e+02 Score=26.96 Aligned_cols=25 Identities=8% Similarity=-0.053 Sum_probs=22.6
Q ss_pred CCHHHHHHHHHHHHHcCCccccccc
Q 024536 222 DDCHVLASYARFLWDAGEEEDDDDG 246 (266)
Q Consensus 222 ~da~a~~~lA~ll~~~G~~~eA~~~ 246 (266)
.++..+..+|..||+-+++.+|+.|
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H 156 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERY 156 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHH
Confidence 5889999999999999999999875
No 298
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=44.65 E-value=86 Score=25.64 Aligned_cols=76 Identities=4% Similarity=0.038 Sum_probs=52.6
Q ss_pred HHHHHHHHCC---------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHH
Q 024536 142 YYQEMIKAYP---------EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAK--PGDGNVLSMYGDLIWINHKDAPRAK 210 (266)
Q Consensus 142 ~y~rALel~P---------~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ld--P~da~al~nla~ll~~~~gd~deAi 210 (266)
+++++++.-- ....+|..|+.+ .. .+..+|....... -..+..|..+|.++. ..|++.+|.
T Consensus 45 lLErc~~~f~~~~~YknD~RyLklWl~ya~~----~~---~p~~if~~L~~~~IG~~~AlfY~~wA~~lE-~~~~~~~A~ 116 (164)
T 2wvi_A 45 LLERAVEALQGEKRYYSDPRFLNLWLKLGRL----CN---EPLDMYSYLHNQGIGVSLAQFYISWAEEYE-ARENFRKAD 116 (164)
T ss_dssp HHHHHHHHTTTCGGGTTCHHHHHHHHHHHHH----CS---CHHHHHHHHHHTTSSTTBHHHHHHHHHHHH-HTTCHHHHH
T ss_pred HHHHHHHHhhhhhhhccCHHHHHHHHHHHHh----cC---CHHHHHHHHHHCCcchhhHHHHHHHHHHHH-HcCCHHHHH
Confidence 5666666533 334566666653 33 3666777776654 556778888887775 489999999
Q ss_pred HHHHHHHHhCCCCHH
Q 024536 211 SYFDRAVHSAPDDCH 225 (266)
Q Consensus 211 ~~~ekAL~l~P~da~ 225 (266)
.+|+++|.....-..
T Consensus 117 ~Iy~~Gi~~~A~P~~ 131 (164)
T 2wvi_A 117 AIFQEGIQQKAEPLE 131 (164)
T ss_dssp HHHHHHHHTTCBSHH
T ss_pred HHHHHHHHcCCCcHH
Confidence 999999998865544
No 299
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=42.10 E-value=1.2e+02 Score=29.95 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=31.5
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 024536 167 IRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWI 201 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~ 201 (266)
..|+|.-|.+...+++..+|+|.++...++.+|.+
T Consensus 461 ~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~ 495 (658)
T 2cfu_A 461 ARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQ 495 (658)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 47999999999999999999999999888887754
No 300
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=40.93 E-value=1.3e+02 Score=24.60 Aligned_cols=53 Identities=9% Similarity=0.098 Sum_probs=38.4
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC--H----HHHHH-HHHHHHH-HcCCHHHHHHHHHHHHHh
Q 024536 167 IRGDFVKAEEYCGRAILAKPGD--G----NVLSM-YGDLIWI-NHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~ldP~d--a----~al~n-la~ll~~-~~gd~deAi~~~ekAL~l 219 (266)
..|+|=+|-+.++.+....+.. . ..+.. +|..+++ .+|+..-|..++++|+..
T Consensus 44 n~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 44 NSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3589999999999999987765 2 23333 3333322 269999999999999883
No 301
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=40.37 E-value=45 Score=25.17 Aligned_cols=14 Identities=21% Similarity=0.313 Sum_probs=8.3
Q ss_pred cCCHHHHHHHHHHH
Q 024536 168 RGDFVKAEEYCGRA 181 (266)
Q Consensus 168 ~gd~e~A~~~~erA 181 (266)
.|.|++|+.+.++|
T Consensus 28 ~gkydeAIech~kA 41 (97)
T 2crb_A 28 AGKYEEAISCHRKA 41 (97)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 45666666665555
No 302
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=39.45 E-value=1e+02 Score=21.92 Aligned_cols=30 Identities=10% Similarity=0.173 Sum_probs=16.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 024536 196 GDLIWINHKDAPRAKSYFDRAVHSAPDDCHV 226 (266)
Q Consensus 196 a~ll~~~~gd~deAi~~~ekAL~l~P~da~a 226 (266)
|-.+.. +|++++|..+|-+|+..-|.-...
T Consensus 24 GE~L~~-~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 24 GEELLA-QGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHH-CCCHHHHHHHHHHHHHHcCCHHHH
Confidence 443333 455666666666666666555443
No 303
>2czy_A Paired amphipathic helix protein SIN3B; SIN3, PAH1, transcriptional repressor, gene regulation; NMR {Mus musculus}
Probab=39.42 E-value=96 Score=21.95 Aligned_cols=57 Identities=7% Similarity=0.036 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 024536 171 FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVL 227 (266)
Q Consensus 171 ~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~ 227 (266)
+++|..|.+++-..--+++..|..+-.++...+.+.-.....+++...+--+++..+
T Consensus 4 ~~dA~~yl~~VK~~F~~~p~~Y~~FL~im~~~k~~~~~~~~v~~rv~~Lf~~hpdLi 60 (77)
T 2czy_A 4 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLI 60 (77)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCHHHH
Confidence 345555555555555555555555544443332222223445555555555555444
No 304
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=39.01 E-value=59 Score=29.30 Aligned_cols=65 Identities=11% Similarity=-0.082 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH----------------H---hCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 024536 152 EDALVLANYAKFLKEIRGDFVKAEEYCGRAI----------------L---AKPGDGNVLSMYGDLIWINHKDAPRAKSY 212 (266)
Q Consensus 152 ~~~~al~nlA~~L~~~~gd~e~A~~~~erAL----------------~---ldP~da~al~nla~ll~~~~gd~deAi~~ 212 (266)
.+|.+|..+|..++ ..+++.+|+.+|-..- . -.|.....+...+++.+...++...|...
T Consensus 132 Gdp~LH~~~a~~~~-~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~ 210 (312)
T 2wpv_A 132 GDPYLHNTIGSKLL-EGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHES 210 (312)
T ss_dssp CCHHHHHHHHHHHH-HTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHH
T ss_pred CCHHHHHHHHHHHh-hcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 58899999999887 4788988888774221 1 12333444444444444445666666666
Q ss_pred HHHHH
Q 024536 213 FDRAV 217 (266)
Q Consensus 213 ~ekAL 217 (266)
|+...
T Consensus 211 ~~~f~ 215 (312)
T 2wpv_A 211 KDIFL 215 (312)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 305
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=38.99 E-value=1.9e+02 Score=26.33 Aligned_cols=82 Identities=10% Similarity=0.015 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHH----------------HHHHHhCCCCHHHHHHHHHHH
Q 024536 136 SESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYC----------------GRAILAKPGDGNVLSMYGDLI 199 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~----------------erAL~ldP~da~al~nla~ll 199 (266)
..+|+++-.+.=...-.+|.+|..+|..++ ..+++.+|+.+| +-.....|..+..+...|++-
T Consensus 118 i~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~-~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~ 196 (336)
T 3lpz_A 118 VKEMIDWSKKFGDYPAGDPELHHVVGTLYV-EEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLP 196 (336)
T ss_dssp HHHHHHHHHHHSSCTTCCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCCHHHHHHHHHHHH-ccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHH
Q ss_pred HHHcCCHHHHHHHHHHHHH
Q 024536 200 WINHKDAPRAKSYFDRAVH 218 (266)
Q Consensus 200 ~~~~gd~deAi~~~ekAL~ 218 (266)
+...++...|...|+.-++
T Consensus 197 yL~l~n~~~A~~~~~~f~~ 215 (336)
T 3lpz_A 197 YLLVANVRAANTAYRIFTS 215 (336)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHH
No 306
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.37 E-value=19 Score=28.16 Aligned_cols=15 Identities=13% Similarity=0.266 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHhC
Q 024536 171 FVKAEEYCGRAILAK 185 (266)
Q Consensus 171 ~e~A~~~~erAL~ld 185 (266)
+++|..|..+||.+|
T Consensus 19 h~~AF~~Is~AL~~D 33 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTD 33 (116)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhh
Confidence 445555555555443
No 307
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=37.27 E-value=1.1e+02 Score=24.81 Aligned_cols=78 Identities=6% Similarity=0.160 Sum_probs=53.1
Q ss_pred HHHHHHHHHC---------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHH
Q 024536 141 VYYQEMIKAY---------PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAK--PGDGNVLSMYGDLIWINHKDAPRA 209 (266)
Q Consensus 141 ~~y~rALel~---------P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ld--P~da~al~nla~ll~~~~gd~deA 209 (266)
.+++++++.- |....+|..|+.+ .. ++...|.-..... -..+..|..+|.++. .+|++.+|
T Consensus 49 ~lLErc~~~f~~~~~YknD~RyLklWl~ya~~----~~---dp~~if~~L~~~~IG~~~AlfYe~wA~~lE-~~g~~~~A 120 (152)
T 4a1g_A 49 TLLEHLMKEFLDKKKYHNDPRFISYCLKFAEY----NS---DLHQFFEFLYNHGIGTLSSPLYIAWAGHLE-AQGELQHA 120 (152)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTT----BS---CHHHHHHHHHTTTTTTTBHHHHHHHHHHHH-HTTCHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHh----cC---CHHHHHHHHHHCCCcHHHHHHHHHHHHHHH-HcCCHHHH
Confidence 4566666553 2233555555542 23 3677777776654 556777888887775 48999999
Q ss_pred HHHHHHHHHhCCCCHHH
Q 024536 210 KSYFDRAVHSAPDDCHV 226 (266)
Q Consensus 210 i~~~ekAL~l~P~da~a 226 (266)
..+|+++|+.+..-..-
T Consensus 121 ~~Vy~~Gi~~~A~P~~r 137 (152)
T 4a1g_A 121 SAVLQRGIQNQAEPREF 137 (152)
T ss_dssp HHHHHHHHHTTCBSHHH
T ss_pred HHHHHHHHHcCCccHHH
Confidence 99999999987765543
No 308
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=34.52 E-value=1.2e+02 Score=31.62 Aligned_cols=106 Identities=13% Similarity=0.028 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHH---H-----------------CC---CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCH
Q 024536 134 KESESMDVYYQEMIK---A-----------------YP---EDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKP-GDG 189 (266)
Q Consensus 134 ~~~eeA~~~y~rALe---l-----------------~P---~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP-~da 189 (266)
+++++|..+|++|-. . .+ ..+..|..... +.+..+.++.+.++.+.||+..+ ++.
T Consensus 856 ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~-LFe~~~~~~~vi~fa~lAi~~~~~~~~ 934 (1139)
T 4fhn_B 856 KEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSK-KLFEESAYIDALEFSLLADASKETDDE 934 (1139)
T ss_dssp TCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHH-HHHHTSCCHHHHHHHHHHHHHCCSCCH
T ss_pred CCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHhccCCCh
Confidence 588899999988721 1 11 11222333433 34567899999999999999764 454
Q ss_pred H----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccc
Q 024536 190 N----VLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDAGEEED 242 (266)
Q Consensus 190 ~----al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~G~~~e 242 (266)
. .|.++-..... .++|++|-..+-+.=. ...--..+..+-..+++.+..+.
T Consensus 935 ~~~~~l~~~iFk~~L~-l~~ye~Ay~aL~~~pd-~~~r~~cLr~LV~~lce~~~~~~ 989 (1139)
T 4fhn_B 935 DLSIAITHETLKTACA-AGKFDAAHVALMVLST-TPLKKSCLLDFVNQLTKQGKINQ 989 (1139)
T ss_dssp HHHHHHHHHHHHHHHH-HCCSGGGGHHHHHHHH-SSSCHHHHHHHHHHHHHHCCHHH
T ss_pred hhHHHHHHHHHHHHHh-hCCHHHHHHHHHhCCC-HHHHHHHHHHHHHHHHhCCChhh
Confidence 3 34555444545 5889998666643321 12234456666666776665443
No 309
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=33.47 E-value=32 Score=25.44 Aligned_cols=28 Identities=11% Similarity=0.185 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 024536 170 DFVKAEEYCGRAILAKPGDGNVLSMYGD 197 (266)
Q Consensus 170 d~e~A~~~~erAL~ldP~da~al~nla~ 197 (266)
+.-+++.-..++|+.+|+||.++..|-.
T Consensus 25 ~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~ 52 (85)
T 2ca5_A 25 TLQGELTLALDKLAKNPSNPQLLAEYQS 52 (85)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 4455566666677778888877665543
No 310
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=33.08 E-value=1.5e+02 Score=25.02 Aligned_cols=51 Identities=12% Similarity=0.082 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 024536 136 SESMDVYYQEMIKAY--PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG 187 (266)
Q Consensus 136 ~eeA~~~y~rALel~--P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~ 187 (266)
...+...|.-+.... -..+..|-.+|.++. ..|++++|.+.|+++|.....
T Consensus 95 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE-~~g~~~~A~~Vy~~GI~~~A~ 147 (202)
T 3esl_A 95 FHESENTFKYMFNKGIGTKLSLFYEEFSKLLE-NAQFFLEAKVLLELGAENNCR 147 (202)
T ss_dssp HHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCB
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCc
Confidence 446667777666654 455677777887764 789999999999999997654
No 311
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=32.79 E-value=1e+02 Score=25.58 Aligned_cols=65 Identities=6% Similarity=-0.008 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHH----HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKF----LKEIRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAP 207 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~----L~~~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~d 207 (266)
.++.+|.+++..|++..|............ .....|++... ..+++ .+. ..+..+..++ + .||+.
T Consensus 28 ~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~~-~ll~~----~~~--~~y~~L~~Av-r-~Gdl~ 96 (203)
T 3t5x_A 28 SDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTV-ELLKK----YHL--MQFAEVTRAV-S-EGNLL 96 (203)
T ss_dssp TCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEECH-HHHHH----TTC--GGGHHHHHHH-H-HTCHH
T ss_pred hCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCCH-HHhhh----Cch--hHHHHHHHHH-H-hCCHH
Confidence 689999999999999998765332222111 12245665432 22222 222 2466676655 3 57754
No 312
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=32.23 E-value=1.3e+02 Score=22.53 Aligned_cols=48 Identities=21% Similarity=0.273 Sum_probs=32.2
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 024536 132 SGKESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNV 191 (266)
Q Consensus 132 ~~~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~a 191 (266)
...+.++-+++|.+-+ .+|..|. ..|+++.|..+|-+||..-|.-...
T Consensus 9 ~~~d~e~~e~~Fl~eV-----------~lGE~L~-~~g~~e~av~Hf~nAl~Vc~qP~~L 56 (95)
T 1om2_A 9 DLKDAEAVQKFFLEEI-----------QLGEELL-AQGDYEKGVDHLTNAIAVCGQPQQL 56 (95)
T ss_dssp CSSSHHHHHHHHHHHH-----------HHHHHHH-HHTCHHHHHHHHHHHHHHHSCHHHH
T ss_pred CCCCHHHHHHHHHHHH-----------HHHHHHH-HCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 3356666666665544 3666654 4688999999888888887764443
No 313
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=31.79 E-value=1.5e+02 Score=21.68 Aligned_cols=54 Identities=11% Similarity=0.044 Sum_probs=36.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 024536 162 KFLKEIRGDFVKAEEYCGRAILAKPGDG----NVLSMYGDLIWI-NHKDAPRAKSYFDRAVH 218 (266)
Q Consensus 162 ~~L~~~~gd~e~A~~~~erAL~ldP~da----~al~nla~ll~~-~~gd~deAi~~~ekAL~ 218 (266)
..++ ..|+|=+|-+.+|.+....|+.. ..+..++..++. ..|+. |..++.+|+.
T Consensus 9 ~~lf-n~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 9 LGLW-RAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHH-HTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHH-hCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 3344 35899999999999999886532 233344444443 35776 9999999987
No 314
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=30.44 E-value=3.1e+02 Score=24.88 Aligned_cols=46 Identities=13% Similarity=0.007 Sum_probs=31.9
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCcccccccccc
Q 024536 203 HKDAPRAKSYFDRAVHSAPDDCHVLASYARFLWDA-GEEEDDDDGDDQ 249 (266)
Q Consensus 203 ~gd~deAi~~~ekAL~l~P~da~a~~~lA~ll~~~-G~~~eA~~~~~~ 249 (266)
.++|.-|..+.++.|++.|....+-..- .++... .+.-+|.+++-|
T Consensus 220 ~KNy~tAa~fArrLLel~p~~~~a~qAr-kil~~ce~~~~Da~eidyD 266 (325)
T 3mv2_A 220 HKNFLQASYFAGEFLKIISSGPRAEQAR-KIKNKADSMASDAIPIDFD 266 (325)
T ss_dssp TTCHHHHHHHHHHHHTTCCSSHHHHHHH-HHHHHHHTSCCCSSCCSCC
T ss_pred hhhHHHHHHHHHHHHhcCCCHHHHHHHH-HHHHHHhcCCCCccccCCC
Confidence 6899999999999999999766554322 333333 445677776543
No 315
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=29.46 E-value=1.4e+02 Score=24.43 Aligned_cols=50 Identities=20% Similarity=0.153 Sum_probs=39.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA 184 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l 184 (266)
+..++-++.+...+.-++-+|.++..+|.+|. ..|+..+|.+++.+|-+.
T Consensus 105 ~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~-Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 105 GKRDKLEEIGREILKNNEVSASILVAIANALR-RVGDERDATTLLIEACKK 154 (172)
T ss_dssp TCHHHHHHHHHHHC--CCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHT
T ss_pred ccHhHHHHHHHHHhccCCCChHHHHHHHHHHH-HhcchhhHHHHHHHHHHh
Confidence 45566667777777777888999999999886 579999999999998664
No 316
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.22 E-value=91 Score=24.25 Aligned_cols=16 Identities=25% Similarity=0.285 Sum_probs=9.3
Q ss_pred cCCHHHHHHHHHHHHH
Q 024536 168 RGDFVKAEEYCGRAIL 183 (266)
Q Consensus 168 ~gd~e~A~~~~erAL~ 183 (266)
.|+-+.|+.+|++.|.
T Consensus 35 ~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 35 LGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 3666666666655554
No 317
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=28.85 E-value=78 Score=25.59 Aligned_cols=51 Identities=14% Similarity=0.234 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 024536 139 MDVYYQEMIKAY--PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGN 190 (266)
Q Consensus 139 A~~~y~rALel~--P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~ 190 (266)
+...|+-+.... -..+..|-.+|.++ +..|++++|.+.|+++|.....-.+
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~l-E~~g~~~~A~~Vy~~Gi~~~A~P~~ 136 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHL-EAQGELQHASAVLQRGIQNQAEPRE 136 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTCBSHH
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCccHH
Confidence 455555555443 45567777788776 4789999999999999998655433
No 318
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=28.03 E-value=81 Score=25.81 Aligned_cols=50 Identities=20% Similarity=0.086 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 024536 139 MDVYYQEMIKAY--PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDG 189 (266)
Q Consensus 139 A~~~y~rALel~--P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da 189 (266)
+...|+.+.... -..+..|..+|.++ +..|++.+|.+.|+++|.....-.
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~l-E~~~~~~~A~~Iy~~Gi~~~A~P~ 130 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEY-EARENFRKADAIFQEGIQQKAEPL 130 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCCcH
Confidence 334454444433 44566777778766 468999999999999999875433
No 319
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=27.16 E-value=1.6e+02 Score=27.90 Aligned_cols=88 Identities=7% Similarity=-0.046 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHHHHHCCC--C----------HHHH----HHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------C--
Q 024536 134 KESESMDVYYQEMIKAYPE--D----------ALVL----ANYAKFLKEIRGDFVKAEEYCGRAILAKP--------G-- 187 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~--~----------~~al----~nlA~~L~~~~gd~e~A~~~~erAL~ldP--------~-- 187 (266)
...++|.....++...--. + -... +++-.++. ..+....|...++..-...+ .
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYF-kl~~~~lckni~k~i~~~~~~p~~~~~p~~q 218 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYF-RIESPQLCSNIFKNFQPKSMLAHFNEYQLDQ 218 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHH-HSSCCTTHHHHHHTHHHHCCCSCGGGSCHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHH-HcCCHHHHHHHHHHhccCCCCcChhhCCccc
Confidence 5678888888998887221 1 1111 22223333 46777878777754433322 1
Q ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 024536 188 DGNVLSMYGDLIWINHKDAPRAKSYFDRAVHS-APDD 223 (266)
Q Consensus 188 da~al~nla~ll~~~~gd~deAi~~~ekAL~l-~P~d 223 (266)
-...++.+|.++.. +.+|.+|..++..|+.. .|.+
T Consensus 219 ~v~Y~YYlGr~~~~-~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 219 QIEYRYLLGRYYLL-NSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHCC
T ss_pred eEeeeHHHHHHHHH-HccHHHHHHHHHHHHHhcCCcc
Confidence 12456667877754 89999999999999999 8865
No 320
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=26.10 E-value=65 Score=23.07 Aligned_cols=59 Identities=10% Similarity=0.172 Sum_probs=27.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 024536 134 KESESMDVYYQEMIKAYPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVL 192 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~da~al 192 (266)
-.++.|+.+++++=+..-+++..|..+=.++...+..-......++++-.+=-++++.+
T Consensus 8 ~~~~dA~~yl~~VK~rF~~~p~~Y~~FL~im~~fk~~~~~~~~v~~rV~~Lf~~hpdLi 66 (80)
T 2cr7_A 8 VHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLI 66 (80)
T ss_dssp CCSCCSHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHGGGCHHHH
T ss_pred CCHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHcCCHHHH
Confidence 34556666666666665566665555444433222111122234444444444444443
No 321
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=25.26 E-value=4.1e+02 Score=25.74 Aligned_cols=43 Identities=19% Similarity=0.190 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 024536 171 FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHS 219 (266)
Q Consensus 171 ~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l 219 (266)
|++|+.+++++- .-+|++-..++..+. ++++-|=.+|.+|.+.
T Consensus 455 Y~~Ai~~L~k~~--~tdd~~~v~~~~~~a----k~yE~aGDyy~~AA~k 497 (526)
T 2wb7_A 455 YKAAINDLQKAA--QQDDYQMFLNYLNAA----KKHEMAGDYYVNAARK 497 (526)
T ss_dssp HHHHHHHHHHHT--TCCSHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh--ccCCHHHHHHHHHHh----hhhhhccHHHHHHHHH
Confidence 455555555553 244454433333221 2366666666666554
No 322
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=24.46 E-value=95 Score=26.73 Aligned_cols=49 Identities=22% Similarity=0.310 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 024536 138 SMDVYYQEMIKAY--PEDALVLANYAKFLKEIRGDFVKAEEYCGRAILAKPG 187 (266)
Q Consensus 138 eA~~~y~rALel~--P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~ldP~ 187 (266)
.+...|.-+.... -..+..|-.+|.+| +..|++++|...|+++|.....
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~l-E~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYF-ESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHTCB
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCc
Confidence 3445555555543 45567777788766 4789999999999999997654
No 323
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=23.77 E-value=2e+02 Score=20.36 Aligned_cols=33 Identities=21% Similarity=0.202 Sum_probs=25.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 024536 160 YAKFLKEIRGDFVKAEEYCGRAILAKPGDGNVLS 193 (266)
Q Consensus 160 lA~~L~~~~gd~e~A~~~~erAL~ldP~da~al~ 193 (266)
+|..|. ..|++++|..+|-+||..-|+-...+.
T Consensus 23 ~GE~L~-~~g~~~~~~~hf~nAl~Vc~qP~~LL~ 55 (73)
T 3ax2_A 23 LGEELL-AQGDYEKGVDHLTNAIAVCGQPQQLLQ 55 (73)
T ss_dssp HHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHHH
T ss_pred HHHHHH-HCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 465554 478999999999999999888766554
No 324
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=23.73 E-value=2.5e+02 Score=27.00 Aligned_cols=57 Identities=11% Similarity=0.004 Sum_probs=40.6
Q ss_pred HHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHH
Q 024536 139 MDVYYQEMIKA-----YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGDGNVLSMYG 196 (266)
Q Consensus 139 A~~~y~rALel-----~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l------dP~da~al~nla 196 (266)
++.+|.+||.. +-.+..-|..+|.+++ ..+++.+|..++-.|-.. ..+|-++|-.+-
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~y-R~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~ 365 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHC-RNRNVREALQAWADTATVIQDYNYCREDEEIYKEFF 365 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhh-hcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHH
Confidence 67788888876 3456677777888777 589999999988777552 245556655443
No 325
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=22.93 E-value=2.2e+02 Score=26.67 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 156 VLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 156 al~nlA~~L~~~~gd~e~A~~~~erAL~ 183 (266)
++..+|.++. .++++++|+.+++++|.
T Consensus 205 A~allArvyL-~~~~~~~A~~~a~~vi~ 231 (495)
T 3lew_A 205 VLGILSRACL-YARQWEKAKTYSDKLLA 231 (495)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HhhhHHHHHHHHHHHHh
Confidence 3333444332 24455555555555544
No 326
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=22.48 E-value=57 Score=24.06 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 024536 205 DAPRAKSYFDRAVHSAPDDCHVLASYARFL 234 (266)
Q Consensus 205 d~deAi~~~ekAL~l~P~da~a~~~lA~ll 234 (266)
+.-+++.--.++|+.+|+||.++..|-..+
T Consensus 25 ~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl 54 (85)
T 2ca5_A 25 TLQGELTLALDKLAKNPSNPQLLAEYQSKL 54 (85)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 455566666777888999998876665433
No 327
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=22.39 E-value=2.2e+02 Score=26.63 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 024536 172 VKAEEYCGRAILAKPG-----------DGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSA 220 (266)
Q Consensus 172 e~A~~~~erAL~ldP~-----------da~al~nla~ll~~~~gd~deAi~~~ekAL~l~ 220 (266)
+..++-++.|+..=|. -.-++..+|.+++. ++++++|+.+.+++|...
T Consensus 175 ~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~-~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 175 AQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLY-ARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHhcC
Confidence 3344445566654442 23577778888876 799999999999999863
No 328
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=21.97 E-value=2.5e+02 Score=20.89 Aligned_cols=46 Identities=13% Similarity=0.185 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 024536 170 DFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVL 227 (266)
Q Consensus 170 d~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~ 227 (266)
|.++-++||-+-+. +|-.+.. +|+++.|+.+|-+||.+-|.-...+
T Consensus 12 d~e~~e~~Fl~eV~-----------lGE~L~~-~g~~e~av~Hf~nAl~Vc~qP~~LL 57 (95)
T 1om2_A 12 DAEAVQKFFLEEIQ-----------LGEELLA-QGDYEKGVDHLTNAIAVCGQPQQLL 57 (95)
T ss_dssp SHHHHHHHHHHHHH-----------HHHHHHH-HTCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CHHHHHHHHHHHHH-----------HHHHHHH-CCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 44555566655543 4555544 5778888888888888887755543
No 329
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=21.96 E-value=19 Score=31.89 Aligned_cols=17 Identities=6% Similarity=0.075 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHHC
Q 024536 134 KESESMDVYYQEMIKAY 150 (266)
Q Consensus 134 ~~~eeA~~~y~rALel~ 150 (266)
.....|+.+.++|++.+
T Consensus 18 p~~~~Ai~lv~~AVe~D 34 (257)
T 2ymb_A 18 PQSTAAATVLKRAVELD 34 (257)
T ss_dssp -----------------
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 35566777777777653
No 330
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=21.62 E-value=5e+02 Score=24.77 Aligned_cols=60 Identities=10% Similarity=0.019 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------hCCCCHHHHHHHHHH
Q 024536 138 SMDVYYQEMIKA-----YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAIL------AKPGDGNVLSMYGDL 198 (266)
Q Consensus 138 eA~~~y~rALel-----~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~------ldP~da~al~nla~l 198 (266)
.++++|++||.. +-.+..-|..+|-+++ ..+++.+|.+++-.|-. ...+|-+.|-.+-.+
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~-R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eI 352 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHC-RNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEV 352 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHH-HhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHH
Confidence 356788888874 3455666777777776 57999999999988755 235666666554433
No 331
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=21.22 E-value=1.5e+02 Score=21.14 Aligned_cols=63 Identities=8% Similarity=0.094 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 024536 171 FVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAVHSAPDDCHVLASYARF 233 (266)
Q Consensus 171 ~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL~l~P~da~a~~~lA~l 233 (266)
+++|..|.+++-..--+++..|..+-.++...+.+.-.....++++..+--+++..+...-.+
T Consensus 10 ~~dA~~yl~~VK~rF~~~p~~Y~~FL~im~~fk~~~~~~~~v~~rV~~Lf~~hpdLi~gFn~F 72 (80)
T 2cr7_A 10 VEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAF 72 (80)
T ss_dssp SCCSHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 457788888887777788888888777665544333344577888888888888776655443
No 332
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=20.89 E-value=1.7e+02 Score=27.55 Aligned_cols=57 Identities=9% Similarity=0.089 Sum_probs=41.1
Q ss_pred HHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHH
Q 024536 139 MDVYYQEMIKA-----YPEDALVLANYAKFLKEIRGDFVKAEEYCGRAILA------KPGDGNVLSMYG 196 (266)
Q Consensus 139 A~~~y~rALel-----~P~~~~al~nlA~~L~~~~gd~e~A~~~~erAL~l------dP~da~al~nla 196 (266)
++.+|.+||.. +-.+..-+..+|.+++ ..+++.+|.+++-.|-.. ..+|-++|-.+-
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~y-R~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~ 343 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYY-RKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFH 343 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhh-hcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHH
Confidence 78889998886 3556677888888777 589999999998877552 234555554433
No 333
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=20.47 E-value=1.5e+02 Score=26.93 Aligned_cols=26 Identities=15% Similarity=0.141 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 192 LSMYGDLIWINHKDAPRAKSYFDRAVH 218 (266)
Q Consensus 192 l~nla~ll~~~~gd~deAi~~~ekAL~ 218 (266)
++..|....+ .+++-+|+.+++.|+.
T Consensus 255 ~y~~a~~~~e-~~k~GeaIa~L~~A~~ 280 (363)
T 3rau_A 255 HLHMGKQAEE-QQKFGERVAYFQSALD 280 (363)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHhHHH-hhhHHHHHHHHHHHHH
Confidence 3344444433 5677777776665543
No 334
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=20.33 E-value=2.6e+02 Score=25.75 Aligned_cols=47 Identities=11% Similarity=0.104 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 024536 136 SESMDVYYQEMIKAYPED--------ALVLANYAKFLKEIRGDFVKAEEYCGRAIL 183 (266)
Q Consensus 136 ~eeA~~~y~rALel~P~~--------~~al~nlA~~L~~~~gd~e~A~~~~erAL~ 183 (266)
++..++.++.|+..-|.. ..++..+|.++. .++++++|..+++++|.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL-~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYL-YKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHh
Confidence 455566666666655532 234444444433 34555666655555554
No 335
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=20.20 E-value=83 Score=32.38 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=35.0
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 024536 167 IRGDFVKAEEYCGRAILAKPGDGNVLSMYGDLIWINHKDAPRAKSYFDRAV 217 (266)
Q Consensus 167 ~~gd~e~A~~~~erAL~ldP~da~al~nla~ll~~~~gd~deAi~~~ekAL 217 (266)
..+.++-| ...+..-|.++-.-+.+|.++.. .|++++|..+|+||-
T Consensus 822 ~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~-~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 822 LFKQYNAC----MQLIGWLNSDPIAVYLKALIYLK-SKEAVKAVRCFKTTS 867 (950)
T ss_dssp HTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHH-TTCHHHHHHHHHTCC
T ss_pred HhcHHHHH----HHHHhhcCCChHHHHHHHHHHHH-cCCHHHHHHHHHHHh
Confidence 35666643 34556668888778889998877 799999999999875
Done!