Query 024538
Match_columns 266
No_of_seqs 156 out of 764
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 05:20:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024538.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024538hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1581 UDP-galactose transpor 100.0 7.1E-64 1.5E-68 440.7 22.9 255 10-266 6-260 (327)
2 KOG1580 UDP-galactose transpor 100.0 9E-58 1.9E-62 389.5 15.2 252 9-264 4-258 (337)
3 KOG1582 UDP-galactose transpor 100.0 4.4E-51 9.6E-56 354.4 13.4 247 5-265 30-278 (367)
4 PF08449 UAA: UAA transporter 100.0 1.4E-47 3E-52 348.1 24.8 241 19-265 1-243 (303)
5 KOG1583 UDP-N-acetylglucosamin 100.0 3E-29 6.6E-34 218.8 8.7 210 19-240 4-223 (330)
6 KOG1443 Predicted integral mem 99.9 2E-20 4.3E-25 165.8 15.6 199 51-260 41-253 (349)
7 PF06027 DUF914: Eukaryotic pr 99.8 7E-18 1.5E-22 154.7 21.3 221 15-258 19-244 (334)
8 TIGR00817 tpt Tpt phosphate/ph 99.8 6.1E-16 1.3E-20 140.2 24.8 194 19-231 3-198 (302)
9 PF04142 Nuc_sug_transp: Nucle 99.7 7.8E-17 1.7E-21 142.4 15.3 146 85-230 15-166 (244)
10 KOG1441 Glucose-6-phosphate/ph 99.7 2.1E-17 4.6E-22 150.1 11.2 201 15-233 14-222 (316)
11 PTZ00343 triose or hexose phos 99.7 3.3E-15 7.1E-20 138.6 26.0 198 15-231 46-253 (350)
12 KOG1444 Nucleotide-sugar trans 99.7 6.2E-16 1.3E-20 138.6 19.0 194 51-257 39-238 (314)
13 TIGR00803 nst UDP-galactose tr 99.6 5.2E-15 1.1E-19 128.6 9.6 152 111-265 2-170 (222)
14 COG5070 VRG4 Nucleotide-sugar 99.5 8.1E-14 1.7E-18 119.2 10.3 209 43-257 25-234 (309)
15 KOG2234 Predicted UDP-galactos 99.5 5E-12 1.1E-16 115.0 22.4 175 87-264 92-267 (345)
16 KOG2766 Predicted membrane pro 99.2 1.2E-12 2.6E-17 114.1 -1.6 210 14-249 23-232 (336)
17 KOG3912 Predicted integral mem 99.2 1.5E-09 3.2E-14 96.1 17.7 169 86-255 83-270 (372)
18 KOG1442 GDP-fucose transporter 99.1 1.3E-10 2.8E-15 102.4 7.1 200 50-257 56-265 (347)
19 TIGR00950 2A78 Carboxylate/Ami 99.0 4.1E-08 8.9E-13 86.5 19.6 189 54-262 17-207 (260)
20 PRK11272 putative DMT superfam 98.7 6.6E-06 1.4E-10 74.4 22.9 186 54-257 35-222 (292)
21 PLN00411 nodulin MtN21 family 98.7 1.3E-05 2.8E-10 74.8 23.5 183 16-206 11-217 (358)
22 PRK11453 O-acetylserine/cystei 98.6 1.3E-05 2.7E-10 72.7 22.4 194 54-261 31-228 (299)
23 PRK11689 aromatic amino acid e 98.5 1.7E-05 3.6E-10 71.8 18.4 197 54-263 31-231 (295)
24 KOG2765 Predicted membrane pro 98.4 3.4E-06 7.5E-11 77.6 11.8 135 91-228 163-299 (416)
25 COG0697 RhaT Permeases of the 98.4 0.00017 3.7E-09 63.6 22.4 104 90-201 73-177 (292)
26 TIGR00688 rarD rarD protein. T 98.4 4.7E-05 1E-09 67.3 18.6 134 54-202 28-170 (256)
27 PRK15430 putative chlorampheni 98.3 0.00017 3.8E-09 65.2 21.2 132 55-201 35-172 (296)
28 PF13536 EmrE: Multidrug resis 98.3 7.8E-06 1.7E-10 63.6 10.5 77 85-162 32-109 (113)
29 PRK10532 threonine and homoser 98.3 0.00041 8.8E-09 62.7 22.3 184 55-262 40-223 (293)
30 PF00892 EamA: EamA-like trans 98.2 1.4E-05 3.1E-10 61.6 9.1 119 30-158 3-125 (126)
31 TIGR03340 phn_DUF6 phosphonate 98.2 0.00049 1.1E-08 61.8 20.1 100 91-200 67-166 (281)
32 PF03151 TPT: Triose-phosphate 97.8 0.00023 4.9E-09 57.6 10.0 83 179-261 1-95 (153)
33 PF03151 TPT: Triose-phosphate 97.7 0.0013 2.9E-08 53.0 13.4 135 22-158 4-152 (153)
34 TIGR00776 RhaT RhaT L-rhamnose 97.5 0.027 5.8E-07 51.0 20.4 112 94-212 66-182 (290)
35 PLN00411 nodulin MtN21 family 97.4 0.008 1.7E-07 56.2 15.6 134 21-162 192-331 (358)
36 KOG4510 Permease of the drug/m 97.2 6.6E-05 1.4E-09 66.6 -0.3 171 87-264 96-270 (346)
37 TIGR00950 2A78 Carboxylate/Ami 97.0 0.037 8E-07 48.4 15.2 62 93-154 197-259 (260)
38 PF08449 UAA: UAA transporter 96.9 0.018 3.9E-07 52.3 12.7 134 21-161 157-299 (303)
39 PRK11272 putative DMT superfam 96.9 0.044 9.5E-07 49.4 14.9 124 27-160 159-286 (292)
40 PRK15051 4-amino-4-deoxy-L-ara 96.9 0.037 8E-07 43.0 12.3 64 95-158 45-108 (111)
41 TIGR00817 tpt Tpt phosphate/ph 96.7 0.016 3.5E-07 52.3 10.8 61 101-161 235-295 (302)
42 PF06027 DUF914: Eukaryotic pr 96.5 0.042 9.1E-07 50.9 12.1 141 15-163 165-309 (334)
43 KOG4314 Predicted carbohydrate 96.4 0.059 1.3E-06 46.2 10.9 147 89-244 55-206 (290)
44 PTZ00343 triose or hexose phos 96.2 0.17 3.7E-06 47.0 14.4 67 94-160 283-349 (350)
45 PRK10452 multidrug efflux syst 96.1 0.056 1.2E-06 42.7 9.2 75 87-161 30-105 (120)
46 PF06800 Sugar_transport: Suga 95.9 0.6 1.3E-05 42.0 15.8 128 87-222 45-177 (269)
47 PRK10532 threonine and homoser 95.9 0.57 1.2E-05 42.2 16.0 67 95-161 217-283 (293)
48 PF05653 Mg_trans_NIPA: Magnes 95.7 0.098 2.1E-06 47.8 10.2 68 95-162 58-125 (300)
49 PRK02971 4-amino-4-deoxy-L-ara 95.5 0.13 2.8E-06 41.2 8.9 71 90-160 51-123 (129)
50 PRK11453 O-acetylserine/cystei 95.4 0.7 1.5E-05 41.7 14.6 67 95-161 223-289 (299)
51 TIGR03340 phn_DUF6 phosphonate 95.1 0.27 5.8E-06 44.0 10.8 63 94-156 218-280 (281)
52 PRK09541 emrE multidrug efflux 95.0 0.67 1.5E-05 36.0 11.3 73 88-160 31-104 (110)
53 PRK15430 putative chlorampheni 95.0 0.82 1.8E-05 41.2 13.6 69 92-160 218-286 (296)
54 COG2962 RarD Predicted permeas 94.9 0.47 1E-05 42.9 11.5 114 123-258 108-222 (293)
55 PRK11689 aromatic amino acid e 94.9 1.2 2.7E-05 40.0 14.5 69 92-160 220-288 (295)
56 TIGR00803 nst UDP-galactose tr 94.7 0.37 8E-06 41.5 10.2 66 91-156 156-221 (222)
57 COG2510 Predicted membrane pro 94.7 0.16 3.5E-06 40.5 7.1 71 88-158 67-138 (140)
58 COG2076 EmrE Membrane transpor 94.2 0.89 1.9E-05 35.1 10.1 74 87-160 30-104 (106)
59 PRK10650 multidrug efflux syst 94.2 0.38 8.3E-06 37.3 8.1 70 88-157 36-106 (109)
60 PRK11431 multidrug efflux syst 94.1 0.46 1E-05 36.6 8.5 74 87-160 29-103 (105)
61 COG2962 RarD Predicted permeas 93.3 4.4 9.5E-05 36.8 14.3 127 23-160 153-284 (293)
62 COG0697 RhaT Permeases of the 92.8 5.4 0.00012 34.7 14.4 74 87-160 214-288 (292)
63 PF10639 UPF0546: Uncharacteri 90.9 0.5 1.1E-05 36.9 4.8 70 88-157 42-112 (113)
64 KOG1441 Glucose-6-phosphate/ph 90.7 1.1 2.3E-05 41.4 7.6 141 16-161 161-309 (316)
65 PF00893 Multi_Drug_Res: Small 87.8 5 0.00011 29.8 8.2 60 91-150 33-93 (93)
66 KOG1582 UDP-galactose transpor 86.2 12 0.00025 34.1 10.7 133 19-161 191-334 (367)
67 TIGR00776 RhaT RhaT L-rhamnose 85.2 5.8 0.00012 35.8 8.7 70 91-160 215-289 (290)
68 KOG2765 Predicted membrane pro 84.5 7.4 0.00016 36.7 9.0 128 31-162 257-393 (416)
69 PF04142 Nuc_sug_transp: Nucle 79.0 38 0.00083 29.8 11.4 120 21-148 117-242 (244)
70 PF07857 DUF1632: CEO family ( 77.4 53 0.0011 29.3 13.1 143 54-204 26-209 (254)
71 PF04657 DUF606: Protein of un 76.8 37 0.0008 27.2 10.0 101 55-156 30-138 (138)
72 KOG1580 UDP-galactose transpor 66.8 12 0.00027 33.2 5.1 76 85-160 239-314 (337)
73 COG5006 rhtA Threonine/homoser 66.0 23 0.0005 31.8 6.6 59 102-160 225-283 (292)
74 PRK13499 rhamnose-proton sympo 56.4 1.7E+02 0.0038 27.3 14.2 104 91-194 77-190 (345)
75 KOG2234 Predicted UDP-galactos 56.2 1.8E+02 0.0038 27.3 13.2 71 91-161 254-324 (345)
76 PF04341 DUF485: Protein of un 54.0 56 0.0012 24.1 6.1 61 16-78 18-78 (91)
77 COG5006 rhtA Threonine/homoser 50.4 1.9E+02 0.0042 26.1 17.4 151 86-259 70-221 (292)
78 PF06800 Sugar_transport: Suga 49.7 2E+02 0.0043 26.0 11.5 58 88-145 196-253 (269)
79 KOG4831 Unnamed protein [Funct 39.7 39 0.00084 26.2 3.2 72 87-158 52-124 (125)
80 PF08627 CRT-like: CRT-like; 34.5 35 0.00077 27.1 2.4 50 13-69 52-101 (130)
81 PRK13499 rhamnose-proton sympo 34.5 2.5E+02 0.0055 26.2 8.5 80 175-263 4-89 (345)
82 PRK02237 hypothetical protein; 33.0 87 0.0019 24.3 4.3 35 127-161 73-107 (109)
83 PF00892 EamA: EamA-like trans 32.4 66 0.0014 23.7 3.7 36 191-229 4-39 (126)
84 TIGR00688 rarD rarD protein. T 31.7 3.4E+02 0.0073 23.4 10.1 52 178-232 2-53 (256)
85 PF02694 UPF0060: Uncharacteri 30.9 82 0.0018 24.3 3.8 34 128-161 72-105 (107)
86 PF15345 TMEM51: Transmembrane 30.2 98 0.0021 27.2 4.6 18 143-160 10-27 (233)
87 KOG1444 Nucleotide-sugar trans 29.7 1.4E+02 0.003 27.5 5.8 74 89-162 230-303 (314)
88 KOG2922 Uncharacterized conser 27.9 2.2E+02 0.0048 26.4 6.7 72 90-161 67-138 (335)
89 PF05631 DUF791: Protein of un 26.7 5.4E+02 0.012 24.2 9.3 42 184-225 44-87 (354)
90 PF05297 Herpes_LMP1: Herpesvi 25.5 23 0.0005 32.2 0.0 72 134-215 71-143 (381)
91 KOG4112 Signal peptidase subun 23.6 2.2E+02 0.0047 21.5 4.8 25 15-41 26-50 (101)
92 COG5070 VRG4 Nucleotide-sugar 22.3 1.3E+02 0.0029 26.6 4.0 73 89-161 226-298 (309)
93 COG3274 Predicted O-acyltransf 21.0 6E+02 0.013 23.7 8.1 77 84-160 143-221 (332)
No 1
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.1e-64 Score=440.71 Aligned_cols=255 Identities=47% Similarity=0.794 Sum_probs=241.0
Q ss_pred ccCccchhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhH
Q 024538 10 GVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYK 89 (266)
Q Consensus 10 ~~~~~~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~ 89 (266)
|.+.++.+++++|+.|||++|+.||++||||+|.+|++++++|+++.||++||++.+.+++.+++.++++..+++.|+++
T Consensus 6 ~~~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~ 85 (327)
T KOG1581|consen 6 GGMANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYK 85 (327)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhH
Confidence 34567889999999999999999999999999999999999999999999999999999999999888866778899999
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCC
Q 024538 90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY 169 (266)
Q Consensus 90 y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~ 169 (266)
|...|+.+..+.+++++||||+|||||+++||||+||||++|.+++||||+++||++++++++|+.+|++.++++ +++
T Consensus 86 y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~--s~~ 163 (327)
T KOG1581|consen 86 YSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD--SSS 163 (327)
T ss_pred HhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC--Ccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997543 223
Q ss_pred CCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHH
Q 024538 170 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD 249 (266)
Q Consensus 170 ~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~ 249 (266)
+.+.+++++|+.++..++++||+++++||+++++++.++++||+++|+|++++.+..++..|.+.++++|+.+|||+.+|
T Consensus 164 ~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~D 243 (327)
T KOG1581|consen 164 KSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFD 243 (327)
T ss_pred ccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHH
Confidence 33457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhcC
Q 024538 250 VALLSTVSDLCFIIIAS 266 (266)
Q Consensus 250 ~~~~s~~~a~Gq~~i~~ 266 (266)
++++|+|||+||.||++
T Consensus 244 i~l~s~~gavGQ~FI~~ 260 (327)
T KOG1581|consen 244 ILLYSTCGAVGQLFIFY 260 (327)
T ss_pred HHHHHHhhhhhhheehh
Confidence 99999999999999974
No 2
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9e-58 Score=389.51 Aligned_cols=252 Identities=29% Similarity=0.447 Sum_probs=233.1
Q ss_pred cccCccchhHHHHHHHHHHHHHHHHHhhhhhhcccCCCC---CCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 024538 9 IGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGA---DNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVA 85 (266)
Q Consensus 9 ~~~~~~~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~---~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~ 85 (266)
..|-.+++.++.+|++||++||..||+.||||++.+||. .+|+|+|..-|++.||..+.+++-+....|++...++.
T Consensus 4 ~~s~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t 83 (337)
T KOG1580|consen 4 VRSWLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNT 83 (337)
T ss_pred cccccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCC
Confidence 445567788999999999999999999999999999984 45899999999999999999999887777765455679
Q ss_pred chhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCC
Q 024538 86 PVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGAD 165 (266)
Q Consensus 86 p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~ 165 (266)
|-+.|+.+|..+.++++.+|.|++|+|||||++.|||||||||++|+++.+|+|+|++|.+|.+|++|+++|++.+.+
T Consensus 84 ~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K-- 161 (337)
T KOG1580|consen 84 PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK-- 161 (337)
T ss_pred cchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998531
Q ss_pred CCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChH
Q 024538 166 LSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLD 245 (266)
Q Consensus 166 ~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~ 245 (266)
..+.+++...+|-++++.|+-+||.+++.|||+.+.|+.+..+||+|+|+|+++.+..+++++||+.+.+.|..|||+
T Consensus 162 --v~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~ 239 (337)
T KOG1580|consen 162 --VGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPY 239 (337)
T ss_pred --cCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccH
Confidence 122235678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhh
Q 024538 246 CFFDVALLSTVSDLCFIII 264 (266)
Q Consensus 246 ~~~~~~~~s~~~a~Gq~~i 264 (266)
+++|+.++++||++||.||
T Consensus 240 ~~~~l~l~ai~s~LGQ~fI 258 (337)
T KOG1580|consen 240 VFWDLTLLAIASCLGQWFI 258 (337)
T ss_pred HHHHHHHHHHHHHhhhHHH
Confidence 9999999999999999998
No 3
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-51 Score=354.43 Aligned_cols=247 Identities=27% Similarity=0.393 Sum_probs=227.7
Q ss_pred hhhhcccCccchhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCcee-ehHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 024538 5 LITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFK-YSLFLVFCNRLMTSAVSAGTLIASRKAIDP 83 (266)
Q Consensus 5 ~~~~~~~~~~~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~-~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~ 83 (266)
|....-++.+++.|+++|+.|+++.|+.|||+||.|++. ++|+ |++++|+.|++..+.++++++...+. .++
T Consensus 30 llg~~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~------~gfkp~GWylTlvQf~~Ysg~glie~~~~~~-k~r 102 (367)
T KOG1582|consen 30 LLGFNLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNV------EGFKPFGWYLTLVQFLVYSGFGLIELQLIQT-KRR 102 (367)
T ss_pred EEeeccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhcc------ccCcccchHHHHHHHHHHHhhhheEEEeecc-cce
Confidence 344556788999999999999999999999999999974 4677 99999999999998888777654443 356
Q ss_pred CcchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCC
Q 024538 84 VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG 163 (266)
Q Consensus 84 ~~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~ 163 (266)
..|+|.|.++|+...+++.++|.++.|+|||+|+++||||++|||++|.++.+|||+++||.++.+++.|+++|+++|++
T Consensus 103 ~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~ 182 (367)
T KOG1582|consen 103 VIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQ 182 (367)
T ss_pred ecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999752
Q ss_pred CCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhC
Q 024538 164 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHH 243 (266)
Q Consensus 164 ~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~ 243 (266)
. ++++++.|+.++..++++||+.++.||+.++.++.++.||++|..-.+.++.++.++.+||+.+++.|+.+|
T Consensus 183 --~-----sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaeh 255 (367)
T KOG1582|consen 183 --T-----SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEH 255 (367)
T ss_pred --c-----CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhC
Confidence 1 158999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hH-HHHHHHHHHHhhhhhhhhhc
Q 024538 244 LD-CFFDVALLSTVSDLCFIIIA 265 (266)
Q Consensus 244 p~-~~~~~~~~s~~~a~Gq~~i~ 265 (266)
|. ...+.+.+|+++.+||.++.
T Consensus 256 p~~tyGy~~~~s~~gylG~~~VL 278 (367)
T KOG1582|consen 256 PVRTYGYAFLFSLAGYLGIVFVL 278 (367)
T ss_pred cHhHHHHHHHHHHHhHhhHHHHH
Confidence 98 88888899999999999875
No 4
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=100.00 E-value=1.4e-47 Score=348.12 Aligned_cols=241 Identities=35% Similarity=0.525 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHHH
Q 024538 19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNI 98 (266)
Q Consensus 19 l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~~ 98 (266)
+++|++|++++|+.||++||++++++++. ++|.+++++|++++.+.+.+.....+.+.+++.|+++|++.++++.
T Consensus 1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~~-----~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (303)
T PF08449_consen 1 FLICVAGIFGGCCSYGILQEKIMTTPYGS-----PFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFF 75 (303)
T ss_pred CEeeHHHHHHHHHHHHHHHHHHHcCCCCC-----cccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHH
Confidence 46899999999999999999999987641 7999999999999999998887666644567899999999999999
Q ss_pred HHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchh
Q 024538 99 LTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVW 178 (266)
Q Consensus 99 ~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~ 178 (266)
.++.++|.||+|+|+|+|+++||||++|||+++++++||||+++||++++++++|+++++++|.++++++ +.+......
T Consensus 76 ~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~-~~~~~~~~~ 154 (303)
T PF08449_consen 76 LASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS-NSSSFSSAL 154 (303)
T ss_pred HHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc-ccccccchh
Confidence 9999999999999999999999999999999999999999999999999999999999999975433211 111223345
Q ss_pred hHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHh--hCcHHHHHHHHHhChHHHHHHHHHHHh
Q 024538 179 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL--EGHLFLAIDFVYHHLDCFFDVALLSTV 256 (266)
Q Consensus 179 G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~--~g~~~~~~~f~~~~p~~~~~~~~~s~~ 256 (266)
|++++++|+++||+++++|||++++|+.+++|+|+|+|++++++.++.++. +||+.++++|+.+||+.+.+++.++++
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998888 999999999999999999999999999
Q ss_pred hhhhhhhhc
Q 024538 257 SDLCFIIIA 265 (266)
Q Consensus 257 ~a~Gq~~i~ 265 (266)
+++||.++.
T Consensus 235 ~~~g~~~i~ 243 (303)
T PF08449_consen 235 GALGQFFIF 243 (303)
T ss_pred HHHHHHHHH
Confidence 999999874
No 5
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3e-29 Score=218.78 Aligned_cols=210 Identities=20% Similarity=0.300 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHHH
Q 024538 19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNI 98 (266)
Q Consensus 19 l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~~ 98 (266)
-+..+.++++++...-+.-|.+.+++.+ ....+||+|+++.++.+++...... ..+|++|+|.|++....++
T Consensus 4 a~~ai~~vf~GCcsnvv~lE~L~~~~pg-------sgNLITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~i~V~mFF 75 (330)
T KOG1583|consen 4 AAAAISLVFGGCCSNVVFLELLVRNEPG-------SGNLITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYAITVAMFF 75 (330)
T ss_pred HHHHHHHHHHhhhchHHHHHHHHHhCCC-------CeeehHHHHHHHHHHhceeeecccc-ccCCCCchhhhheehheee
Confidence 3456788999999999999999987644 3357899999999988877653222 2458899999999999999
Q ss_pred HHHHHhHHhhhc-CChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC-----C-
Q 024538 99 LTTTCQYEALKY-VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS-----K- 171 (266)
Q Consensus 99 ~a~~~~n~aL~y-vs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~-----~- 171 (266)
..++++|.|++| +|+|.|+++||..++.+|++|+++.||||+.+||.+++++|+|++++++.+++ |...+. +
T Consensus 76 ~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~-d~~~~~~~l~~~~ 154 (330)
T KOG1583|consen 76 IVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSK-DGRSKLSGLDSGS 154 (330)
T ss_pred eeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCc-chhhhhcccccCc
Confidence 999999999997 99999999999999999999999999999999999999999999999998643 222211 1
Q ss_pred C-Cc--cchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHH
Q 024538 172 G-RE--NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 240 (266)
Q Consensus 172 ~-~~--~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~ 240 (266)
+ .+ ...+|+.++..++++++..+.+||+++++||.+|.|.|||+|+.++++-+ +.-+|..+.+.-.
T Consensus 155 ~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl---f~~~div~~~~~~ 223 (330)
T KOG1583|consen 155 AQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL---FMGDDIVSHWRLA 223 (330)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH---HhcchHHHHHHHH
Confidence 1 11 22469999999999999999999999999999999999999998776543 3445555554443
No 6
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.85 E-value=2e-20 Score=165.79 Aligned_cols=199 Identities=15% Similarity=0.211 Sum_probs=162.0
Q ss_pred ceeehHHHHHHHHHHHHHHHHHHHHhhhcCC---CCCcchhHH----HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcc
Q 024538 51 YFKYSLFLVFCNRLMTSAVSAGTLIASRKAI---DPVAPVYKY----CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAK 123 (266)
Q Consensus 51 ~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~---~~~~p~~~y----~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k 123 (266)
.|+||.|++.+|.+.-.++|.+....++.+. +.+..|+.| +|++++..++..++|++++|++.+.+++.||+.
T Consensus 41 ~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSs 120 (349)
T KOG1443|consen 41 NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSS 120 (349)
T ss_pred CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccH
Confidence 4999999999999999999888766544221 223445444 599999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHcc
Q 024538 124 MIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKG 203 (266)
Q Consensus 124 ~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~ 203 (266)
++++.+++.++.-+|++|.-.+.+.+|.+|+++|++.+ .+++..|..++.+|.++.|+++.+.+.++++
T Consensus 121 i~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks-----------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~ 189 (349)
T KOG1443|consen 121 ILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS-----------TQFNIEGFFLVLAASLLSGLRWAFTQMLLRN 189 (349)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc-----------cceeehhHHHHHHHHHhhhhhHHHHHHHHhc
Confidence 99999999999999999999999999999999999872 3689999999999999999999999999998
Q ss_pred CC---CChhhHHHHhhHHHHHHHHH-HHHhhCcHHH-HHHHH--HhChHHHHHHHHHHHhhhhh
Q 024538 204 YD---MEIHNQIFYTTLCSCVLSLS-GLILEGHLFL-AIDFV--YHHLDCFFDVALLSTVSDLC 260 (266)
Q Consensus 204 ~~---~~~~e~m~~~n~~~~~~~~~-~~~~~g~~~~-~~~f~--~~~p~~~~~~~~~s~~~a~G 260 (266)
++ .+|.++|++..+|..+..++ .+.+||-... .-+.. +++-++++.+..+++++.+.
T Consensus 190 ~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~la 253 (349)
T KOG1443|consen 190 QPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLA 253 (349)
T ss_pred CccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHH
Confidence 75 57999999999999988876 5677872221 11222 22323555555566666543
No 7
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.80 E-value=7e-18 Score=154.74 Aligned_cols=221 Identities=18% Similarity=0.181 Sum_probs=168.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcC----CCCCcchhHH
Q 024538 15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA----IDPVAPVYKY 90 (266)
Q Consensus 15 ~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~----~~~~~p~~~y 90 (266)
|.+.+++|.+|+..+++... +++.|.+=++.+.+.-.++=...+.+|+.. ...+.|+++|
T Consensus 19 Q~lsl~~~~t~~~s~~l~~~----------------~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y 82 (334)
T PF06027_consen 19 QVLSLCITGTGTFSSLLANK----------------GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKY 82 (334)
T ss_pred HHHHHHHHhHHHHHHHHHhc----------------CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHH
Confidence 55677777777777665422 344665555554433332211222233321 1125788999
Q ss_pred HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC
Q 024538 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~ 170 (266)
+.+|++++.++++.+.|++|.|....++..+...+.+|+++++++|+||++.|++++++...|+++...+|..+. +++
T Consensus 83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~--~~~ 160 (334)
T PF06027_consen 83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSG--SDS 160 (334)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccccc--ccC
Confidence 999999999999999999999999999999998888999999999999999999999999999999998875321 111
Q ss_pred CCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHH-HhhCcHHHHHHHHHhChHHHHH
Q 024538 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGL-ILEGHLFLAIDFVYHHLDCFFD 249 (266)
Q Consensus 171 ~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~-~~~g~~~~~~~f~~~~p~~~~~ 249 (266)
++.++...|.++++++..+.|+.++.||++.|++ +..|.+...++|+++++.+.+ ++|.+- ++-+.++++....
T Consensus 161 ~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~ile~~~---i~~~~w~~~~~~~ 235 (334)
T PF06027_consen 161 SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA--PRVEFLGMLGLFGFIISGIQLAILERSG---IESIHWTSQVIGL 235 (334)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC--CHHHHHHHHHHHHHHHHHHHHHheehhh---hhccCCChhhHHH
Confidence 2346789999999999999999999999999976 468999999999999998765 455443 3334678888887
Q ss_pred HHHHHHhhh
Q 024538 250 VALLSTVSD 258 (266)
Q Consensus 250 ~~~~s~~~a 258 (266)
++.+++|-.
T Consensus 236 ~v~~~~~lf 244 (334)
T PF06027_consen 236 LVGYALCLF 244 (334)
T ss_pred HHHHHHHHH
Confidence 777777644
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.75 E-value=6.1e-16 Score=140.24 Aligned_cols=194 Identities=11% Similarity=0.038 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHh--hhcCCCCCcchhHHHHHHHH
Q 024538 19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA--SRKAIDPVAPVYKYCLVSMS 96 (266)
Q Consensus 19 l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~--~~~~~~~~~p~~~y~~~s~~ 96 (266)
....+.-.|..-..+.+++.++.+ .|++|.++++.|+..+++...+.... +++..-++..+++.++.+++
T Consensus 3 ~~~~~~~w~~~~~~~~~~NK~~l~--------~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 74 (302)
T TIGR00817 3 TGLLFGLWYFLNVYFNIYNKKLLN--------VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIV 74 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--------hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 344556667777777777877763 37899999999998887765444211 11111122346678999999
Q ss_pred HHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccc
Q 024538 97 NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENT 176 (266)
Q Consensus 97 ~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~ 176 (266)
......++|.+++|+|.+..++.|+..|+.+++++++++|||+++++++++++..+|+++.... + .+++
T Consensus 75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~----~-------~~~~ 143 (302)
T TIGR00817 75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT----E-------LSFN 143 (302)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC----c-------cccc
Confidence 9999999999999999999999999999999999999999999999999999999999875422 1 2345
Q ss_pred hhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhC
Q 024538 177 VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEG 231 (266)
Q Consensus 177 ~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g 231 (266)
..|.++.+++.++-++...+.+|..++++.++.+...|.+.++.+..++.....+
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~ 198 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITE 198 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHc
Confidence 7899999999999999999999998866778899999999999988888766544
No 9
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.73 E-value=7.8e-17 Score=142.43 Aligned_cols=146 Identities=17% Similarity=0.291 Sum_probs=127.6
Q ss_pred cchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCC
Q 024538 85 APVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGA 164 (266)
Q Consensus 85 ~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~ 164 (266)
....+++++|++|...+.+.+.+++|++.+++++.+.+|++.+.+++++++|||.+.+||++.+++++|+++...++..+
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999886543
Q ss_pred CCCCCCC------CCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhh
Q 024538 165 DLSPYSK------GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILE 230 (266)
Q Consensus 165 ~~~~~~~------~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~ 230 (266)
++.++++ +..+...|+++++++.+++|+.+++.||++|+.+.+.+.+......+|.++.++.....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~ 166 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLS 166 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2111111 12456789999999999999999999999999998989999999999999998876443
No 10
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.73 E-value=2.1e-17 Score=150.07 Aligned_cols=201 Identities=17% Similarity=0.193 Sum_probs=165.3
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhh----cCCCCCcchhHH
Q 024538 15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASR----KAIDPVAPVYKY 90 (266)
Q Consensus 15 ~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~----~~~~~~~p~~~y 90 (266)
+.....++..-.+++...+..+..++... | .|+||.+++.+|...+.+.. ...+..+ ++.+++.++++.
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~-~-----~f~~p~~lt~~~~~~~~l~~-~v~~~l~~~~~~~~~~~~~~~~l 86 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSK-Y-----GFPFPITLTMLHLFCGALAL-LVIKVLKLVPPSKISSKLPLRTL 86 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhcc-C-----CCCCccHHHHHHHHHHHHHH-HHHHHhcCCCCCccccccchHHH
Confidence 44555555666666666666666776643 3 59999999999776665443 3333322 222345789999
Q ss_pred HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC
Q 024538 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~ 170 (266)
+++|+.+..+.+++|.|++|+|+++.++.|+..|+.+.++++++.+|+|+++.|++.+.++.||++.+..|
T Consensus 87 lpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e--------- 157 (316)
T KOG1441|consen 87 LPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE--------- 157 (316)
T ss_pred HHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999998862
Q ss_pred CCCccchhhHHHHHHHHHHhHhHHHHHHHHH--ccCCCChhhHHHHhhHHHHHHHH-HHHHh-hCcH
Q 024538 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLF--KGYDMEIHNQIFYTTLCSCVLSL-SGLIL-EGHL 233 (266)
Q Consensus 171 ~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~--~~~~~~~~e~m~~~n~~~~~~~~-~~~~~-~g~~ 233 (266)
.+++++|.+..+.+.+..+.++.++++++ |+++.++.+++.|+.+.+.++.+ |.... +|+.
T Consensus 158 --~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~ 222 (316)
T KOG1441|consen 158 --LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNK 222 (316)
T ss_pred --ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccc
Confidence 37899999999999999999999999999 46789999999999999999998 75543 4443
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.73 E-value=3.3e-15 Score=138.63 Aligned_cols=198 Identities=11% Similarity=0.063 Sum_probs=162.8
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCcchhHH
Q 024538 15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID----PVAPVYKY 90 (266)
Q Consensus 15 ~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~----~~~p~~~y 90 (266)
+.++....+...|..-..+.+.+.++.+ .++||++++.+|++.+++...+......++.+ ++..+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~--------~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 117 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALN--------MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNF 117 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 3688999999999999999888888874 36799999999999998776544322111111 12245678
Q ss_pred HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC
Q 024538 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~ 170 (266)
+++++++......+|.|+++++.+..++.|++.|+.+++++++++|||++++++++++++++|+++...++
T Consensus 118 lp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~--------- 188 (350)
T PTZ00343 118 LPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE--------- 188 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc---------
Confidence 99999999988889999999999999999999999999999999999999999999999999999987541
Q ss_pred CCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCC-----CChhhHHHHhhHHHHHHHHHHHH-hhC
Q 024538 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD-----MEIHNQIFYTTLCSCVLSLSGLI-LEG 231 (266)
Q Consensus 171 ~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~-----~~~~e~m~~~n~~~~~~~~~~~~-~~g 231 (266)
.++++.|+++.++|.++.++++.+.++++++++ .++.+...+..+++.+++++... .|+
T Consensus 189 --~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~ 253 (350)
T PTZ00343 189 --LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEG 253 (350)
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 245688999999999999999999999988653 55666777778899999888665 443
No 12
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.72 E-value=6.2e-16 Score=138.57 Aligned_cols=194 Identities=18% Similarity=0.164 Sum_probs=157.5
Q ss_pred ceeehHHHHHHHHHHHHHHHHHHHHhhh-cCCCC--CcchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHH
Q 024538 51 YFKYSLFLVFCNRLMTSAVSAGTLIASR-KAIDP--VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPV 127 (266)
Q Consensus 51 ~F~~~~fL~~~q~~~~~l~~~~~~~~~~-~~~~~--~~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipv 127 (266)
+|+-..++.+.|.+.+++.-+. .+..| .+.|+ ....|+|.|+++.+.++.+.+..+++|+|+|+.+++|+..++-+
T Consensus 39 ~f~~~l~l~~~Q~l~s~~~v~~-lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ 117 (314)
T KOG1444|consen 39 NFPMGLLLMLLQSLASVLVVLV-LKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILT 117 (314)
T ss_pred CCcHHHHHHHHHHHHHHHHHHH-HHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHH
Confidence 3445555555999877655332 22222 12221 34568999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCC
Q 024538 128 MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDME 207 (266)
Q Consensus 128 mi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~ 207 (266)
++.+.+++|||+++..|.++..+..|.......| .+++..|+.++..+++..+....+-+|-.+.-+.+
T Consensus 118 ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d-----------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~ 186 (314)
T KOG1444|consen 118 AIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD-----------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLN 186 (314)
T ss_pred HHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc-----------ceecchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999999999999999999999988776553 25667799999999999999999999999988889
Q ss_pred hhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHH---hChHHHHHHHHHHHhh
Q 024538 208 IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY---HHLDCFFDVALLSTVS 257 (266)
Q Consensus 208 ~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~---~~p~~~~~~~~~s~~~ 257 (266)
.+++|+|.|+++++......+.+||+. ++.+.. .+|.++..+..-+++|
T Consensus 187 ~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~g 238 (314)
T KOG1444|consen 187 KFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMG 238 (314)
T ss_pred ceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHH
Confidence 999999999999999999889999988 666653 3455666555545444
No 13
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.59 E-value=5.2e-15 Score=128.57 Aligned_cols=152 Identities=18% Similarity=0.194 Sum_probs=113.5
Q ss_pred CChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCC-------------C-CCCC--CCCCc
Q 024538 111 VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGA-------------D-LSPY--SKGRE 174 (266)
Q Consensus 111 vs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~-------------~-~~~~--~~~~~ 174 (266)
+++|.++.+|+++++|+|+.++...+|||+..||+++++++.|+....++|.+. + ++.. .....
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 689999999999999999999999999999999999999999999877764311 0 0000 00123
Q ss_pred cchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHh-hCcHHHHHHHHHhChHHHHHHHHH
Q 024538 175 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL-EGHLFLAIDFVYHHLDCFFDVALL 253 (266)
Q Consensus 175 ~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~-~g~~~~~~~f~~~~p~~~~~~~~~ 253 (266)
+.+.|..+++.++++||+.+++||+.+|+++.+.++.++.+.+++.+........ .++......|..+||...+.+.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 159 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG-- 159 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH--
Confidence 5678999999999999999999999988776555555555566665544443333 2455555566678888777554
Q ss_pred HHhhhhhhhhhc
Q 024538 254 STVSDLCFIIIA 265 (266)
Q Consensus 254 s~~~a~Gq~~i~ 265 (266)
+++++||++|.
T Consensus 160 -~~~a~~~~~v~ 170 (222)
T TIGR00803 160 -LLNVGGGLCIG 170 (222)
T ss_pred -HHHHhcCceee
Confidence 57888988764
No 14
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.52 E-value=8.1e-14 Score=119.24 Aligned_cols=209 Identities=16% Similarity=0.091 Sum_probs=153.3
Q ss_pred cCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCcchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhh
Q 024538 43 VPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASR-KAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKC 121 (266)
Q Consensus 43 ~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~-~~~~~~~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS 121 (266)
++|.-+..+|+-...+.+.|.+.+.+ +.+.++.-| .+. |....++|.+++++.+...+.+.+||+|+++|.++++|.
T Consensus 25 NKyVls~~gfnMnflll~vQSlvcvv-~l~iLk~l~~~~f-R~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKN 102 (309)
T COG5070 25 NKYVLSNLGFNMNFLLLAVQSLVCVV-GLLILKFLRLVEF-RLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKN 102 (309)
T ss_pred hHheecCCCCchhhHHHHHHHHHHHH-HHHHHHHHhHhhe-ehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhcc
Confidence 34433445788888899999887654 444443333 222 245678999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHH
Q 024538 122 AKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF 201 (266)
Q Consensus 122 ~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~ 201 (266)
.++|.+..+..+++|+|.+..+..+.++|+..-...+.+|.... .-+ ...---|+.++..+++-++......++..
T Consensus 103 ltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~-~~~---~~~lN~GY~Wm~~NclssaafVL~mrkri 178 (309)
T COG5070 103 LTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQAS-AFK---AQILNPGYLWMFTNCLSSAAFVLIMRKRI 178 (309)
T ss_pred ceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHH-HHH---hcccCCceEEEehhhHhHHHHHHHHHHhh
Confidence 99999999999999999999999999999999998888763211 001 11222499999999999888877777666
Q ss_pred ccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhh
Q 024538 202 KGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVS 257 (266)
Q Consensus 202 ~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~ 257 (266)
|-.+...+|.|||.|+.++++.....+..+|..+.=---.-.|+.+..++.-++|+
T Consensus 179 ~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s 234 (309)
T COG5070 179 KLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS 234 (309)
T ss_pred cccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence 65555679999999999999988766555444332000012345555555444443
No 15
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.51 E-value=5e-12 Score=115.04 Aligned_cols=175 Identities=15% Similarity=0.253 Sum_probs=143.6
Q ss_pred hhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCC
Q 024538 87 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADL 166 (266)
Q Consensus 87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~ 166 (266)
..+..++|+.|...+-+.+.++.|+|-.++++.-.-|+..+.++.+++++||.+++||.+.+++++|+++..+...++..
T Consensus 92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~ 171 (345)
T KOG2234|consen 92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG 171 (345)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999955332221
Q ss_pred CCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhC-cHHHHHHHHHhChH
Q 024538 167 SPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEG-HLFLAIDFVYHHLD 245 (266)
Q Consensus 167 ~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g-~~~~~~~f~~~~p~ 245 (266)
+.....+.+...|...++.+++.+|+.+++-||++|+-+.+.+-+...++.+|.++.+..+..++ +-...-.|++.|-.
T Consensus 172 a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~ 251 (345)
T KOG2234|consen 172 AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSS 251 (345)
T ss_pred ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccH
Confidence 11112246889999999999999999999999999998889888889999999999998876553 22222456777777
Q ss_pred HHHHHHHHHHhhhhhhhhh
Q 024538 246 CFFDVALLSTVSDLCFIII 264 (266)
Q Consensus 246 ~~~~~~~~s~~~a~Gq~~i 264 (266)
..|.+.. -.|+|.+.+
T Consensus 252 ~vw~vVl---~~a~gGLlv 267 (345)
T KOG2234|consen 252 IVWLVVL---LNAVGGLLV 267 (345)
T ss_pred HHHHHHH---HHhccchhH
Confidence 7665544 555555544
No 16
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.20 E-value=1.2e-12 Score=114.05 Aligned_cols=210 Identities=16% Similarity=0.208 Sum_probs=152.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHH
Q 024538 14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLV 93 (266)
Q Consensus 14 ~~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~ 93 (266)
+|.+++++|..+...+++. || .-+-|.+=+|.+-..-+++=..++..|++ .-+..+++|...
T Consensus 23 GQiLSL~~t~~a~tss~la-----~k-----------~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~--~~~~~~~hYill 84 (336)
T KOG2766|consen 23 GQILSLLITSTAFTSSELA-----RK-----------GINAPTSQTFLNYVLLALVYGPIMLFRRK--YIKAKWRHYILL 84 (336)
T ss_pred HHHHHHHHHcchhhhHHHH-----hc-----------cCCCccHHHHHHHHHHHHHHhhHHHhhhH--HHHHHHHHhhhe
Confidence 4667788887777666553 22 12234333333322222221122334442 224678899999
Q ss_pred HHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCC
Q 024538 94 SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGR 173 (266)
Q Consensus 94 s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~ 173 (266)
++.++.++++--.|++|.+....++.-|--..-|++.+|++++.||.+.|+.+|+.+.+|+++...+|-... +..+.
T Consensus 85 a~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag---d~agg 161 (336)
T KOG2766|consen 85 AFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAG---DRAGG 161 (336)
T ss_pred eEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccc---cccCC
Confidence 999999999999999999999888876655555999999999999999999999999999999888863221 11124
Q ss_pred ccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHH
Q 024538 174 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD 249 (266)
Q Consensus 174 ~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~ 249 (266)
++...|.+++++..-|.|+.++.||.+.|+ .+..|+|-..++++.+++.+..+.+..-...+ +++.++...
T Consensus 162 snp~~GD~lvi~GATlYaVSNv~EEflvkn--~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl---~w~~~i~~y 232 (336)
T KOG2766|consen 162 SNPVKGDFLVIAGATLYAVSNVSEEFLVKN--ADRVELMGFLGLFGAIISAIQFIFERHHVSTL---HWDSAIFLY 232 (336)
T ss_pred CCCccCcEEEEecceeeeeccccHHHHHhc--CcHHHHHHHHHHHHHHHHHHHHhhhccceeeE---eehHHHHHH
Confidence 678899999999999999999999999995 56899999999999999999987776443333 444444433
No 17
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.20 E-value=1.5e-09 Score=96.10 Aligned_cols=169 Identities=15% Similarity=0.159 Sum_probs=138.0
Q ss_pred chh--HHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCC
Q 024538 86 PVY--KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG 163 (266)
Q Consensus 86 p~~--~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~ 163 (266)
|++ .+.++++++..++.+-|.+|.+.+-+..|+.|-+-+|+|-+++.-+++|+...+||++...+.+|+++....|-.
T Consensus 83 pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~ 162 (372)
T KOG3912|consen 83 PFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVH 162 (372)
T ss_pred CCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecc
Confidence 554 467899999999999999999999999999999999999999999999999999999999999999999887543
Q ss_pred CCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHH-HHHh-------------
Q 024538 164 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLS-GLIL------------- 229 (266)
Q Consensus 164 ~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~-~~~~------------- 229 (266)
.++.+-+ +-++...|..+++.+-+.-|++-+++||.+++++.+|.+..-|-..+++++.-. ...+
T Consensus 163 ~~~~p~~-d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~ 241 (372)
T KOG3912|consen 163 LVTDPYT-DYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNP 241 (372)
T ss_pred cccCCcc-ccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCC
Confidence 2221211 125667899999999999999999999999999999999999999999765433 2211
Q ss_pred hC---cHHHHHHHHHhChHHHHHHHHHHH
Q 024538 230 EG---HLFLAIDFVYHHLDCFFDVALLST 255 (266)
Q Consensus 230 ~g---~~~~~~~f~~~~p~~~~~~~~~s~ 255 (266)
.| |...++.-+.+.|.....+.++.+
T Consensus 242 ~g~~eD~~~~~~~~~e~p~l~val~~~~v 270 (372)
T KOG3912|consen 242 RGVLEDWGDAFAALQESPSLAVALIGFTV 270 (372)
T ss_pred CcchhhHHHHHHHhcCCchhHHHHhhhhh
Confidence 22 555566667888887665555433
No 18
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.12 E-value=1.3e-10 Score=102.42 Aligned_cols=200 Identities=18% Similarity=0.149 Sum_probs=152.4
Q ss_pred CceeehHHHHHHHHHHHHHHHHHHHHhhhc----CCCCC-----cchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHh
Q 024538 50 EYFKYSLFLVFCNRLMTSAVSAGTLIASRK----AIDPV-----APVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 120 (266)
Q Consensus 50 ~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~----~~~~~-----~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~K 120 (266)
....-|.|.+++|++.+..+........++ ..-|. ...++..+.++.+.....++|..|+|++++++.+.|
T Consensus 56 ~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgR 135 (347)
T KOG1442|consen 56 VILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGR 135 (347)
T ss_pred hhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEecc
Confidence 456789999999999887776554332221 11111 234678999999999999999999999999999999
Q ss_pred hcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHH
Q 024538 121 CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKL 200 (266)
Q Consensus 121 S~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~ 200 (266)
|...+++.+..++++|+|-+..-..++.+|..|- .++- |.+.. ++..++.|++.-+.|.++-|+-..+..|.
T Consensus 136 sLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF---~lGv---dqE~~--~~~ls~~GvifGVlaSl~vAlnaiytkk~ 207 (347)
T KOG1442|consen 136 SLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGF---GLGV---DQEGS--TGTLSWIGVIFGVLASLAVALNAIYTKKV 207 (347)
T ss_pred chhhhHHHHhHHhhcccccccccceeehhheehh---eecc---ccccc--cCccchhhhHHHHHHHHHHHHHHHhhhee
Confidence 9999999999999999999999888888888774 3342 21111 24678899999999999999998888766
Q ss_pred HccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHh-ChHHHHHHHHHHHhh
Q 024538 201 FKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH-HLDCFFDVALLSTVS 257 (266)
Q Consensus 201 ~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~-~p~~~~~~~~~s~~~ 257 (266)
.-.-+-..+.+-+|+|..++++.+|.++++||+.+-+.|.+. .-.++..+.+-+++|
T Consensus 208 l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfg 265 (347)
T KOG1442|consen 208 LPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFG 265 (347)
T ss_pred cccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHH
Confidence 554455578888999999999999999999999987766533 333333333334443
No 19
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.04 E-value=4.1e-08 Score=86.46 Aligned_cols=189 Identities=15% Similarity=0.073 Sum_probs=131.4
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHH-HHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHH
Q 024538 54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSM-SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT 132 (266)
Q Consensus 54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~-~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~ 132 (266)
-+..+.+...+.+.+.-.+.. .++ +++.+++.+...+. .......+-+.|++|+|...-.+..+..|+.+++.+.
T Consensus 17 ~~~~~~~~r~~~~~l~l~~~~-~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~ 92 (260)
T TIGR00950 17 PLYFAVFRRLIFALLLLLPLL-RRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSD 92 (260)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-Hhc---cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHH
Confidence 344455555555544332222 222 23334455666654 4577888999999999999999999999999999999
Q ss_pred HHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHH
Q 024538 133 LIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQI 212 (266)
Q Consensus 133 l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m 212 (266)
++.|+|.+++++.++.+..+|+.+....+ + .+.+..|+.+.+.+.++-+..+..+.+..++++.++....
T Consensus 93 l~~~e~~~~~~~~gi~i~~~Gv~li~~~~---~-------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~ 162 (260)
T TIGR00950 93 LMGKERPRKLVLLAAVLGLAGAVLLLSDG---N-------LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFT 162 (260)
T ss_pred HHccCCCcHHHHHHHHHHHHhHHhhccCC---c-------ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHH
Confidence 99999999999999999999998865331 1 1345689999999999999999999999887766555555
Q ss_pred HHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhh-hhhhh
Q 024538 213 FYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVS-DLCFI 262 (266)
Q Consensus 213 ~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~-a~Gq~ 262 (266)
.+...++.++..+.....++... .++..+..++..++.+ .+|+.
T Consensus 163 ~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 207 (260)
T TIGR00950 163 GWVLLLGALLLLPFAWFLGPNPQ------ALSLQWGALLYLGLIGTALAYF 207 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCC------cchHHHHHHHHHHHHHHHHHHH
Confidence 45677777777766555543221 1344444455455443 44544
No 20
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.72 E-value=6.6e-06 Score=74.36 Aligned_cols=186 Identities=12% Similarity=0.099 Sum_probs=120.6
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHH-HHHHHHhHHhh-hcCChhHHHHHhhcchHHHHHHH
Q 024538 54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSN-ILTTTCQYEAL-KYVSFPVQTLAKCAKMIPVMIWG 131 (266)
Q Consensus 54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~-~~a~~~~n~aL-~yvs~p~~~l~KS~k~ipvmi~~ 131 (266)
-|..+++..++.+.++-.+....+|++.+++..+++....+.+. .....+-+.+. ++++...-.+.=+..|+.+++++
T Consensus 35 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla 114 (292)
T PRK11272 35 PPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFS 114 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH
Confidence 45667777777776665554444443222333445556666654 45677778888 89999888888888999999999
Q ss_pred HHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhH
Q 024538 132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQ 211 (266)
Q Consensus 132 ~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~ 211 (266)
.+ .|||.+++++.++++-.+|+.+...++ + .+.+..|..+.+.+.++-|..+..++|.-+++ +...
T Consensus 115 ~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~---~-------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~---~~~~ 180 (292)
T PRK11272 115 RL-FGIRTRKLEWLGIAIGLAGIVLLNSGG---N-------LSGNPWGAILILIASASWAFGSVWSSRLPLPV---GMMA 180 (292)
T ss_pred HH-hcccCchhHHHHHHHHHHhHHHHhcCc---c-------cccchHHHHHHHHHHHHHHHHHHHHHhcCCCc---chHH
Confidence 86 699999999999999999998865331 1 12345799999999999999999998764322 2223
Q ss_pred HHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhh
Q 024538 212 IFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVS 257 (266)
Q Consensus 212 m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~ 257 (266)
..+....+.+...+.....++... ...+++.+..++..++.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~l~i~~ 222 (292)
T PRK11272 181 GAAEMLAAGVVLLIASLLSGERLT----ALPTLSGFLALGYLAVFG 222 (292)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccc----ccCCHHHHHHHHHHHHHH
Confidence 334444454444443333332110 012444455555555543
No 21
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.66 E-value=1.3e-05 Score=74.84 Aligned_cols=183 Identities=13% Similarity=0.092 Sum_probs=118.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhc-CCCCCcch---hHHH
Q 024538 16 VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK-AIDPVAPV---YKYC 91 (266)
Q Consensus 16 ~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~-~~~~~~p~---~~y~ 91 (266)
..+.......+..+|..+..+-....+.-. .|..+.+.-+..+.++-.+....+++ +..++.++ .++.
T Consensus 11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~--------~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~ 82 (358)
T PLN00411 11 EAVFLTAMLATETSVVGISTLFKVATSKGL--------NIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIG 82 (358)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHCCC--------CccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHH
Confidence 444445555566666666554444444321 11224455555554443333323221 22232333 3456
Q ss_pred HHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHH------hccccChhhHHHHHHHHHhhHHhhccCCCCC
Q 024538 92 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI------MQKRYKGYDYFLALLVTLGCSIFILFPSGAD 165 (266)
Q Consensus 92 ~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~------~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~ 165 (266)
..+++......+.+.+++|+|-..-.+.=+..|+.+++++.++ +++|.++++++++++-.+|+.+....+....
T Consensus 83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~ 162 (358)
T PLN00411 83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRV 162 (358)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccc
Confidence 6666654555689999999999999999999999999999999 5999999999999999999987664321100
Q ss_pred -C----------CCC--C-CCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCC
Q 024538 166 -L----------SPY--S-KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM 206 (266)
Q Consensus 166 -~----------~~~--~-~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~ 206 (266)
. +.. . .+..+..+|.++++.+.++-++....|++..++|..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~ 217 (358)
T PLN00411 163 FVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA 217 (358)
T ss_pred ccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 0 000 0 011223669999999999999999999999888754
No 22
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.65 E-value=1.3e-05 Score=72.75 Aligned_cols=194 Identities=14% Similarity=0.178 Sum_probs=116.7
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHH-HHHHHHhHHhhhc-CChhHHHHHhhcchHHHHHHH
Q 024538 54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSN-ILTTTCQYEALKY-VSFPVQTLAKCAKMIPVMIWG 131 (266)
Q Consensus 54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~-~~a~~~~n~aL~y-vs~p~~~l~KS~k~ipvmi~~ 131 (266)
.|..+++..+..+.+...+.. ++ ++.+++.....++.. .....+.+.+++| ++-..-.+.-++.|+.+++++
T Consensus 31 ~p~~~~~~R~~~a~~~l~~~~--~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~ 104 (299)
T PRK11453 31 PPLMLAGLRFMLVAFPAIFFV--AR----PKVPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLG 104 (299)
T ss_pred CHHHHHHHHHHHHHHHHHHHh--cC----CCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHH
Confidence 366666666655443322221 22 123344444444433 3344466778887 777666666778899999999
Q ss_pred HHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCC-Chhh
Q 024538 132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM-EIHN 210 (266)
Q Consensus 132 ~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~-~~~e 210 (266)
++++|+|.+.++++++++..+|+.+....+. + +.+.+..|+.+.+.+.++-+.....++|..++++. ....
T Consensus 105 ~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~--~------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~ 176 (299)
T PRK11453 105 AFTFGERLQGKQLAGIALAIFGVLVLIEDSL--N------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMS 176 (299)
T ss_pred HHHhcCcCcHHHHHHHHHHHHhHHHhccccC--C------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhH
Confidence 9999999999999999999999988764311 1 11334679999999999999999999998765432 2222
Q ss_pred HHHHhhHHHHHHHH-HHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhhhhhh
Q 024538 211 QIFYTTLCSCVLSL-SGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCF 261 (266)
Q Consensus 211 ~m~~~n~~~~~~~~-~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~a~Gq 261 (266)
..++....+.+... .....+++......+...+++.+..++..++.+...+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~ 228 (299)
T PRK11453 177 LVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVG 228 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 23333333222222 1222344322111222345666666666655544433
No 23
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.48 E-value=1.7e-05 Score=71.84 Aligned_cols=197 Identities=9% Similarity=-0.049 Sum_probs=115.9
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHHHHHHHHhHHhhhcC----ChhHHHHHhhcchHHHHH
Q 024538 54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYV----SFPVQTLAKCAKMIPVMI 129 (266)
Q Consensus 54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~~~a~~~~n~aL~yv----s~p~~~l~KS~k~ipvmi 129 (266)
-|..+.+.-+..+.++-.... ++++ .++.+.+....-++.......+.+.+++|. +-..-.+.-+..|+.+++
T Consensus 31 ~P~~~~~~R~~~a~l~l~~~~--~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~l 107 (295)
T PRK11689 31 GPVGGAAMIYSVSGLLLLLTV--GFPR-LRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTIL 107 (295)
T ss_pred ChHHHHHHHHHHHHHHHHHHc--cccc-cccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHH
Confidence 355566666555544432221 1211 122333333444455556666777777764 333334556678999999
Q ss_pred HHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChh
Q 024538 130 WGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIH 209 (266)
Q Consensus 130 ~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~ 209 (266)
+++++.|+|.++++++++++-.+|+++....+.+.+..+...+..++..|.++.+.+.++-+..+.+.+|..++++ +.
T Consensus 108 l~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~--~~ 185 (295)
T PRK11689 108 FAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN--GI 185 (295)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC--ch
Confidence 9999999999999999999999999887654311000000001123467999999999999999999999866554 33
Q ss_pred hHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhhhhhhhh
Q 024538 210 NQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFII 263 (266)
Q Consensus 210 e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~a~Gq~~ 263 (266)
...+ ..+.+...+....+++.. ...+++.+..++..++++.+++++
T Consensus 186 ~~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~t~~~~~l 231 (295)
T PRK11689 186 TLFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAAAAMGFGYAA 231 (295)
T ss_pred hHHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3322 122222222222333221 134566666666666667666654
No 24
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=98.40 E-value=3.4e-06 Score=77.63 Aligned_cols=135 Identities=12% Similarity=0.087 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC
Q 024538 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~ 170 (266)
+....+-+.++...|.||.|-++...++.-|..-.++..++.++.+.|+++.|.++|++-..|+++.+.+|+..+ ++
T Consensus 163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~---~~ 239 (416)
T KOG2765|consen 163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN---SD 239 (416)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc---cc
Confidence 344566788999999999999999999999999999999999999999999999999999999999999865321 11
Q ss_pred CCCccchhhHHHHHHHHHHhHhHHHHHHHHHccC--CCChhhHHHHhhHHHHHHHHHHHH
Q 024538 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY--DMEIHNQIFYTTLCSCVLSLSGLI 228 (266)
Q Consensus 171 ~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~--~~~~~e~m~~~n~~~~~~~~~~~~ 228 (266)
..+++.+.|.++.+++.++.|.+.+.-.|-..++ +.+...+.-|+++|.+++.-|.++
T Consensus 240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~ 299 (416)
T KOG2765|consen 240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLI 299 (416)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHH
Confidence 1246778999999999999999998887766665 566666667899999888876553
No 25
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.40 E-value=0.00017 Score=63.61 Aligned_cols=104 Identities=18% Similarity=0.165 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHH-HHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCC
Q 024538 90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT-LIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP 168 (266)
Q Consensus 90 y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~-l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~ 168 (266)
.....+.......+-+.+++|++.+..++..++.|+.+.+++. +++++|.+++++.+.++...|+.+....+..++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~--- 149 (292)
T COG0697 73 LLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG--- 149 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch---
Confidence 4455666677778888889999999999999999999999996 777999999999999999999998876532100
Q ss_pred CCCCCccchhhHHHHHHHHHHhHhHHHHHHHHH
Q 024538 169 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF 201 (266)
Q Consensus 169 ~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~ 201 (266)
+. ...|..+.+.+.++.++....++++.
T Consensus 150 ----~~-~~~g~~~~l~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 150 ----IL-SLLGLLLALAAALLWALYTALVKRLS 177 (292)
T ss_pred ----hH-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 57899999999999999999999888
No 26
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.39 E-value=4.7e-05 Score=67.28 Aligned_cols=134 Identities=10% Similarity=-0.007 Sum_probs=95.1
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHhhhcC------CCC--Ccc-hhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcch
Q 024538 54 YSLFLVFCNRLMTSAVSAGTLIASRKA------IDP--VAP-VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKM 124 (266)
Q Consensus 54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~------~~~--~~p-~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ 124 (266)
-|..+++..++.+.+.-.+....++++ .++ +.. +......++.......+-+.|++|+|...-.+.-.+.|
T Consensus 28 ~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~P 107 (256)
T TIGR00688 28 PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINP 107 (256)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHH
Confidence 455677777777664433333222211 011 111 12345667778888999999999999999999999999
Q ss_pred HHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHc
Q 024538 125 IPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFK 202 (266)
Q Consensus 125 ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~ 202 (266)
+.+++++.+++|||.++++++++++-.+|+++....+ + +.. .+.+++.++-+.....+++..+
T Consensus 108 i~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~--~---------~~~----~~~l~aa~~~a~~~i~~~~~~~ 170 (256)
T TIGR00688 108 LVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK--G---------SLP----WEALVLAFSFTAYGLIRKALKN 170 (256)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc--C---------Cch----HHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999998765331 0 111 2356677888888888877644
No 27
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.33 E-value=0.00017 Score=65.24 Aligned_cols=132 Identities=8% Similarity=0.015 Sum_probs=91.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcCCC--C-CcchhH---HHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHH
Q 024538 55 SLFLVFCNRLMTSAVSAGTLIASRKAID--P-VAPVYK---YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVM 128 (266)
Q Consensus 55 ~~fL~~~q~~~~~l~~~~~~~~~~~~~~--~-~~p~~~---y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvm 128 (266)
|.-+.+.+.+.+.++-......+++..+ + ....++ ...-++.......+-+.+++|+|...-.+.-.+.|+.++
T Consensus 35 ~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~ 114 (296)
T PRK15430 35 ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNI 114 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 5567777777765543333323221100 0 011122 233455667789999999999999999999999999999
Q ss_pred HHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHH
Q 024538 129 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF 201 (266)
Q Consensus 129 i~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~ 201 (266)
+++++++|||.++++++++++-.+|+++....+ + +.. .+.+.+.++-|+....+++..
T Consensus 115 l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~--~---------~~~----~~~l~aa~~~a~~~i~~r~~~ 172 (296)
T PRK15430 115 VLGMIFLGERFRRMQWLAVILAICGVLVQLWTF--G---------SLP----IIALGLAFSFAFYGLVRKKIA 172 (296)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc--C---------Ccc----HHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999865321 0 111 245556778888888887653
No 28
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.32 E-value=7.8e-06 Score=63.59 Aligned_cols=77 Identities=14% Similarity=0.169 Sum_probs=66.6
Q ss_pred cchhHHHHHHHHHH-HHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC
Q 024538 85 APVYKYCLVSMSNI-LTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS 162 (266)
Q Consensus 85 ~p~~~y~~~s~~~~-~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~ 162 (266)
.|+......+.... .+..+-+.|++|.+ +...+..+..|+.+++++++++|+|.+++++++++++++|+++..++|.
T Consensus 32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 44444455566654 88999999999999 6777889999999999999999999999999999999999999988854
No 29
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.28 E-value=0.00041 Score=62.73 Aligned_cols=184 Identities=9% Similarity=-0.011 Sum_probs=110.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHH
Q 024538 55 SLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI 134 (266)
Q Consensus 55 ~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~ 134 (266)
|..+.+..++.+.+.-.+....++++ .++..++.....+++......+.+.+++|+|...-.+.-.+.|+.+++++
T Consensus 40 ~~~~~~~R~~~a~l~l~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~--- 115 (293)
T PRK10532 40 APGVTALRLALGTLILIAIFKPWRLR-FAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS--- 115 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh---
Confidence 34467777777655443332222221 12233445567777788888999999999999988887877787777665
Q ss_pred hccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHH
Q 024538 135 MQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFY 214 (266)
Q Consensus 135 ~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~ 214 (266)
+||....+ .+.+..+|+.+....+. +. .+.+..|.++.+.+.++-+......+|..++++. ... .+
T Consensus 116 -~~~~~~~~--~~~i~~~Gv~li~~~~~--~~------~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~--~~~-~~ 181 (293)
T PRK10532 116 -SRRPVDFV--WVVLAVLGLWFLLPLGQ--DV------SHVDLTGAALALGAGACWAIYILSGQRAGAEHGP--ATV-AI 181 (293)
T ss_pred -cCChHHHH--HHHHHHHHHheeeecCC--Cc------ccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCc--hHH-HH
Confidence 35544444 44555678776442211 10 1335689999999999999999999988766543 333 45
Q ss_pred hhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhhhhhhh
Q 024538 215 TTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFI 262 (266)
Q Consensus 215 ~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~a~Gq~ 262 (266)
...++.+...+....++.. ...++..+..++..++.++++++
T Consensus 182 ~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~l~lgv~~t~~~~ 223 (293)
T PRK10532 182 GSLIAALIFVPIGALQAGE------ALWHWSILPLGLAVAILSTALPY 223 (293)
T ss_pred HHHHHHHHHHHHHHHccCc------ccCCHHHHHHHHHHHHHHHHHHH
Confidence 5566665555544443320 01344443334445555544443
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.17 E-value=1.4e-05 Score=61.61 Aligned_cols=119 Identities=16% Similarity=0.219 Sum_probs=86.6
Q ss_pred HHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcC--CC-CCcchhHHHHHHHH-HHHHHHHhH
Q 024538 30 LVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA--ID-PVAPVYKYCLVSMS-NILTTTCQY 105 (266)
Q Consensus 30 ~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~--~~-~~~p~~~y~~~s~~-~~~a~~~~n 105 (266)
+..+.+++++..++ -.|...++.+++.+.+ ........+++ .+ +...+......+.. ...+..+.+
T Consensus 3 ~a~~~~~~k~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (126)
T PF00892_consen 3 WAIYSVFSKKLLKK---------ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYF 72 (126)
T ss_pred eeeHHHHHHHHhcc---------CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHH
Confidence 34556666666642 2355667777777665 33333222221 11 11223345566666 689999999
Q ss_pred HhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhh
Q 024538 106 EALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI 158 (266)
Q Consensus 106 ~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~ 158 (266)
.++++++.+...+.....|+.+++++++++|++.+++++++++++..|+.+..
T Consensus 73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 73 YALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998764
No 31
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.16 E-value=0.00049 Score=61.77 Aligned_cols=100 Identities=13% Similarity=0.087 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC
Q 024538 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS 170 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~ 170 (266)
...+........+-+.+++|.|...-...-...|+.+.+++++++|+|.++++++++++...|+.+....+ + +
T Consensus 67 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~---~-~--- 139 (281)
T TIGR03340 67 AISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSR---F-A--- 139 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccc---c-c---
Confidence 34455677888899999999999999888888899999999999999999999999999999999876432 1 1
Q ss_pred CCCccchhhHHHHHHHHHHhHhHHHHHHHH
Q 024538 171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKL 200 (266)
Q Consensus 171 ~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~ 200 (266)
..+..|..+.+.+.++-+......++.
T Consensus 140 ---~~~~~g~~~~l~aal~~a~~~i~~k~~ 166 (281)
T TIGR03340 140 ---QHRRKAYAWALAAALGTAIYSLSDKAA 166 (281)
T ss_pred ---ccchhHHHHHHHHHHHHHHhhhhcccc
Confidence 123458778888888888888766544
No 32
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.80 E-value=0.00023 Score=57.56 Aligned_cols=83 Identities=19% Similarity=0.205 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHhHhHHHHHHHHHcc-----CCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHH--Hh-----ChHH
Q 024538 179 GVSLMVGYLGFDGFTSTFQDKLFKG-----YDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV--YH-----HLDC 246 (266)
Q Consensus 179 G~~ll~~sl~~dg~~~~~qe~~~~~-----~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~--~~-----~p~~ 246 (266)
|+++.+.|.++.|+++.++|+++++ .+.++.++++|+++.++++.++..+..++........ .+ .|+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7899999999999999999999998 6899999999999999999998776665444222211 22 4566
Q ss_pred HHHHHHHHHhhhhhh
Q 024538 247 FFDVALLSTVSDLCF 261 (266)
Q Consensus 247 ~~~~~~~s~~~a~Gq 261 (266)
+..++..++.+.+-+
T Consensus 81 ~~~~~~~~~~~~~~n 95 (153)
T PF03151_consen 81 IFLLILSGLLAFLYN 95 (153)
T ss_pred HHHHHHHHHHHHHHH
Confidence 666665555554433
No 33
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.72 E-value=0.0013 Score=53.02 Aligned_cols=135 Identities=11% Similarity=0.130 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHh-hhcC-------C-C-----CCcch
Q 024538 22 AVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA-SRKA-------I-D-----PVAPV 87 (266)
Q Consensus 22 ~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~-~~~~-------~-~-----~~~p~ 87 (266)
++.+--.+...+.+++|++++++-. ++++.+ +.-+.......+.+...+.... .+.+ . + +...+
T Consensus 4 ~~l~s~~~~al~~v~~~~~~~~~~~-~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 81 (153)
T PF03151_consen 4 LALASSLFSALRNVLIKKLLKKVSS-NSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI 81 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-cccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence 3444455667788889999876311 122222 2223333333333332222211 1100 0 0 11223
Q ss_pred hHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhh
Q 024538 88 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI 158 (266)
Q Consensus 88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~ 158 (266)
......+++.+..+..++..+++.|.-++.+....|.+.+.++++++++++.+..++.+.++..+|+.+.+
T Consensus 82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 34566788888999999999999999999999999999999999999999999999999999999998764
No 34
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.53 E-value=0.027 Score=50.98 Aligned_cols=112 Identities=10% Similarity=0.076 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhHHhhhcCChhHHHHHhh-cchHHHHHHHHHHhccccChhh----HHHHHHHHHhhHHhhccCCCCCCCC
Q 024538 94 SMSNILTTTCQYEALKYVSFPVQTLAKC-AKMIPVMIWGTLIMQKRYKGYD----YFLALLVTLGCSIFILFPSGADLSP 168 (266)
Q Consensus 94 s~~~~~a~~~~n~aL~yvs~p~~~l~KS-~k~ipvmi~~~l~~~kry~~~~----~~~v~~it~Gv~lf~~~~~~~~~~~ 168 (266)
+......+.+...|.+|+++++-+..=+ .-++.+.+++.+++|+|.+.++ +++++++.+|+++....+.+ +.
T Consensus 66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~---~~ 142 (290)
T TIGR00776 66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDK---SA 142 (290)
T ss_pred HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccc---cc
Confidence 3446778889999999999988866655 5566788899999999999999 99999999999887655311 11
Q ss_pred CCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHH
Q 024538 169 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQI 212 (266)
Q Consensus 169 ~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m 212 (266)
+.++..+...|+++.++|-++.++....-++. +.++.+..
T Consensus 143 ~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~ 182 (290)
T TIGR00776 143 GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVL 182 (290)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceeh
Confidence 10000233679999999999999988888754 24455553
No 35
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.39 E-value=0.008 Score=56.21 Aligned_cols=134 Identities=11% Similarity=0.045 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHh-hhcCCCC-----CcchhHHHHHH
Q 024538 21 FAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA-SRKAIDP-----VAPVYKYCLVS 94 (266)
Q Consensus 21 ~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~-~~~~~~~-----~~p~~~y~~~s 94 (266)
....+--.++..|.++|.|..++ |+ ....+++.++++..+...+.... .+...+. .......+..+
T Consensus 192 ~l~l~aa~~wa~~~il~~~~~~~-~~-------~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~ 263 (358)
T PLN00411 192 ALLTIQGIFVSVSFILQAHIMSE-YP-------AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMA 263 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-cC-------cHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHH
Confidence 33444445667788889987642 32 22244555554443333222111 1111110 11111111123
Q ss_pred HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC
Q 024538 95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS 162 (266)
Q Consensus 95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~ 162 (266)
+....+-.+.|+++++++...--++-...|+..+++++++++++.++.++++.+++.+|+.+...++.
T Consensus 264 i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~ 331 (358)
T PLN00411 264 IITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA 331 (358)
T ss_pred HHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence 33456777899999999999999999999999999999999999999999999999999999987654
No 36
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.23 E-value=6.6e-05 Score=66.63 Aligned_cols=171 Identities=15% Similarity=0.170 Sum_probs=115.2
Q ss_pred hhHHHHH-HHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC--C
Q 024538 87 VYKYCLV-SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS--G 163 (266)
Q Consensus 87 ~~~y~~~-s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~--~ 163 (266)
-|+|++. ++.-+.+..+.++|++|+|.+=-++.-=+.|+.+.+++++++|++|+..+.+...+-..|+++-.-.+. +
T Consensus 96 ~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG 175 (346)
T KOG4510|consen 96 KRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFG 175 (346)
T ss_pred cEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccC
Confidence 3444433 677788889999999999999988888899999999999999999999999999999999987543210 0
Q ss_pred CCCCCCCC-CCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHh
Q 024538 164 ADLSPYSK-GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH 242 (266)
Q Consensus 164 ~~~~~~~~-~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~ 242 (266)
++.+...+ ..+.+..|....+.+.+.-+-.-..-.++-|+ .|..--|-|-...+++.+++.+..-|++. +-.+-+
T Consensus 176 ~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~--~h~~msvsyf~~i~lV~s~I~~~~ig~~~--lP~cgk 251 (346)
T KOG4510|consen 176 DTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKN--AHAIMSVSYFSLITLVVSLIGCASIGAVQ--LPHCGK 251 (346)
T ss_pred CCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcc--ccEEEEehHHHHHHHHHHHHHHhhcccee--cCcccc
Confidence 11111111 11345667777777777767666666666554 33444566777778888887765555332 111122
Q ss_pred ChHHHHHHHHHHHhhhhhhhhh
Q 024538 243 HLDCFFDVALLSTVSDLCFIII 264 (266)
Q Consensus 243 ~p~~~~~~~~~s~~~a~Gq~~i 264 (266)
+. +.+.-+++.|.+||+++
T Consensus 252 dr---~l~~~lGvfgfigQIll 270 (346)
T KOG4510|consen 252 DR---WLFVNLGVFGFIGQILL 270 (346)
T ss_pred ce---EEEEEehhhhhHHHHHH
Confidence 22 22334577788888875
No 37
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.02 E-value=0.037 Score=48.42 Aligned_cols=62 Identities=13% Similarity=0.129 Sum_probs=56.5
Q ss_pred HHHH-HHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhh
Q 024538 93 VSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGC 154 (266)
Q Consensus 93 ~s~~-~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv 154 (266)
.+.. ...+..+-+.++++++.....+.....|+..+++++++++++.+..+++++.++..|+
T Consensus 197 ~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 197 LGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 4443 5678888999999999999999999999999999999999999999999999999886
No 38
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.93 E-value=0.018 Score=52.32 Aligned_cols=134 Identities=15% Similarity=0.167 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHh--hhcCCCC-----C--cchhHHH
Q 024538 21 FAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA--SRKAIDP-----V--APVYKYC 91 (266)
Q Consensus 21 ~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~--~~~~~~~-----~--~p~~~y~ 91 (266)
+....-..+....+.+|||++++ |+. .+.-+.+..-+++.....+.... .++..+. + ..+...+
T Consensus 157 ~ll~~sl~~~a~~~~~qe~~~~~-~~~------~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~ 229 (303)
T PF08449_consen 157 ILLLLSLLLDAFTGVYQEKLFKK-YGK------SPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLL 229 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCC------cHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHH
Confidence 33444446677788899999864 331 11223333333333333333222 2210000 1 1233445
Q ss_pred HHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 92 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 92 ~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
..+++......+-+...+..+-.+..+....+-+.+++++.+++++++++.+|++++++..|+.+-.+.+
T Consensus 230 ~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~ 299 (303)
T PF08449_consen 230 LFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK 299 (303)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence 6677777777777777888888999999999999999999999999999999999999999999988873
No 39
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=96.90 E-value=0.044 Score=49.39 Aligned_cols=124 Identities=8% Similarity=0.090 Sum_probs=83.0
Q ss_pred HHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHH---HHHHH-HHHHHHH
Q 024538 27 MTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKY---CLVSM-SNILTTT 102 (266)
Q Consensus 27 ~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y---~~~s~-~~~~a~~ 102 (266)
-.+|..+++.++|..+. .+...+..|.....+...+.............+...+ ...++ ....+..
T Consensus 159 ~~~~a~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~ 228 (292)
T PRK11272 159 SASWAFGSVWSSRLPLP----------VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAIS 228 (292)
T ss_pred HHHHHHHHHHHHhcCCC----------cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45666667767775421 1233445565555544333322221111111122222 33333 3456677
Q ss_pred HhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 103 CQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 103 ~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
+-+.++++++.....+.-...|+..+++++++++++.+..++++.+++..|+.+....
T Consensus 229 l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 229 AYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999987665
No 40
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=96.88 E-value=0.037 Score=42.99 Aligned_cols=64 Identities=9% Similarity=-0.027 Sum_probs=58.8
Q ss_pred HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhh
Q 024538 95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI 158 (266)
Q Consensus 95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~ 158 (266)
..+..+..+-..+++.+|...--..-+..++-+++.+++++|+|.+++|++.+.++..|+++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5678899999999999999988888888889999999999999999999999999999998764
No 41
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=96.74 E-value=0.016 Score=52.32 Aligned_cols=61 Identities=15% Similarity=0.216 Sum_probs=56.0
Q ss_pred HHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 101 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 101 ~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
+.+.+.++++++-.+..+.-..|++.++++++++++++.+..++++.+++..|+.+....+
T Consensus 235 ~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k 295 (302)
T TIGR00817 235 QQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295 (302)
T ss_pred HHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 3566689999999999999999999999999999999999999999999999999988764
No 42
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.53 E-value=0.042 Score=50.92 Aligned_cols=141 Identities=11% Similarity=0.050 Sum_probs=75.9
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCC---CCcc-hhHH
Q 024538 15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID---PVAP-VYKY 90 (266)
Q Consensus 15 ~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~---~~~p-~~~y 90 (266)
..+.--+.+..=-..|..+.++||++.++. +..++-.++.+.+++.+.+...+ ..+.+.+ .... ...+
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~~-----~~~~~lg~~Glfg~ii~~iq~~i---le~~~i~~~~w~~~~~~~~ 236 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVKKA-----PRVEFLGMLGLFGFIISGIQLAI---LERSGIESIHWTSQVIGLL 236 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhcccC-----CHHHHHHHHHHHHHHHHHHHHHh---eehhhhhccCCChhhHHHH
Confidence 345544445555677888999999998742 23344444444444443333222 2221111 1101 0111
Q ss_pred HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCC
Q 024538 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG 163 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~ 163 (266)
..-+++.+..-.+....+++-+-....+.=.....-.+++++++++.++++.-+++.+++.+|++++...++.
T Consensus 237 v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 237 VGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 1111111111122233344433333333222333447889999999999999999999999999999987643
No 43
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=96.36 E-value=0.059 Score=46.22 Aligned_cols=147 Identities=12% Similarity=0.125 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCC
Q 024538 89 KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP 168 (266)
Q Consensus 89 ~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~ 168 (266)
+-.|-+++-.+++++--.||+-++.+...-.-+|.-.+|.+++++++|.|+..-+++++++-..|+++..+.|+.
T Consensus 55 ~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~----- 129 (290)
T KOG4314|consen 55 RTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE----- 129 (290)
T ss_pred eecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch-----
Confidence 335566777788888889999999999999999999999999999999999999999999999999999888531
Q ss_pred CCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCC-ChhhHHHHhhHHHHHHH-HHH--HHhhC-cHHHHHHHHHhC
Q 024538 169 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM-EIHNQIFYTTLCSCVLS-LSG--LILEG-HLFLAIDFVYHH 243 (266)
Q Consensus 169 ~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~-~~~e~m~~~n~~~~~~~-~~~--~~~~g-~~~~~~~f~~~~ 243 (266)
....+.|+...+.|.++.+++-+.-.+...+-+. +....|--..++.+++. ++. +.++| |-.++++...+-
T Consensus 130 ----~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG 205 (290)
T KOG4314|consen 130 ----HADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWG 205 (290)
T ss_pred ----hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCch
Confidence 1346899999999999999888877666544322 23444545555555553 333 34455 333333333333
Q ss_pred h
Q 024538 244 L 244 (266)
Q Consensus 244 p 244 (266)
|
T Consensus 206 ~ 206 (290)
T KOG4314|consen 206 C 206 (290)
T ss_pred h
Confidence 3
No 44
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=96.23 E-value=0.17 Score=47.02 Aligned_cols=67 Identities=18% Similarity=0.270 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 94 SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 94 s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
++.+..-+.++..+++.++--++.+.-..|++.+.+.++++++++.+..++++.+++.+|+.+.++.
T Consensus 283 ~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 283 GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 3344444444446999999999999999999999999999999999999999999999999987653
No 45
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.15 E-value=0.056 Score=42.71 Aligned_cols=75 Identities=11% Similarity=0.036 Sum_probs=64.0
Q ss_pred hhHHHHHHHHHHHHHHHhHHhhhcCChhHH-HHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 87 VYKYCLVSMSNILTTTCQYEALKYVSFPVQ-TLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~-~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
+..+...-+++..+.++=..|+|++|..+- -+......+-+.+.++++++++.++.+++...++.+|++.....+
T Consensus 30 ~~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 30 NGGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 355677888889999999999999887764 444667889999999999999999999999999999999887664
No 46
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=95.94 E-value=0.6 Score=41.98 Aligned_cols=128 Identities=9% Similarity=0.065 Sum_probs=86.5
Q ss_pred hhHHHHHHHHHHHHHHHhHHhhhcCChhHHHH-HhhcchHHHHHHHHHHhccccChhhHH----HHHHHHHhhHHhhccC
Q 024538 87 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTL-AKCAKMIPVMIWGTLIMQKRYKGYDYF----LALLVTLGCSIFILFP 161 (266)
Q Consensus 87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l-~KS~k~ipvmi~~~l~~~kry~~~~~~----~v~~it~Gv~lf~~~~ 161 (266)
+.--++.+++-......+..|++++.++.-+= .-..-++-+-+++++++++--+..+++ +++++.+|+++.++.|
T Consensus 45 ~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~ 124 (269)
T PF06800_consen 45 FIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQD 124 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccc
Confidence 34446778888999999999999865432111 112335667888999999876766655 8889999999998886
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHH
Q 024538 162 SGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVL 222 (266)
Q Consensus 162 ~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~ 222 (266)
.+++ +.+++++..-|+..++++.+....+....+- .+.++++..+ -...+..+
T Consensus 125 ~~~~---~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~l-PqaiGm~i 177 (269)
T PF06800_consen 125 KKSD---KSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFL-PQAIGMLI 177 (269)
T ss_pred cccc---ccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHH-HHHHHHHH
Confidence 4322 1112345667999999999988888888643 4556666655 33334433
No 47
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=95.91 E-value=0.57 Score=42.19 Aligned_cols=67 Identities=9% Similarity=-0.024 Sum_probs=60.2
Q ss_pred HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
+....+..+.|.++++++-....+.-...|+...++++++++++.++.+++..+++.+|++......
T Consensus 217 ~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 217 LSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 3455677788999999999999999999999999999999999999999999999999999887663
No 48
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=95.73 E-value=0.098 Score=47.77 Aligned_cols=68 Identities=12% Similarity=0.254 Sum_probs=61.1
Q ss_pred HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC
Q 024538 95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS 162 (266)
Q Consensus 95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~ 162 (266)
.++..+..++..|+.+.|.+..+=+-+..++...+++..+.|+|.+++++++++++.+|+++.....+
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~ 125 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP 125 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence 45577778999999999999999889999999999999999999999999999999999998776643
No 49
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=95.49 E-value=0.13 Score=41.16 Aligned_cols=71 Identities=14% Similarity=0.093 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHH--HHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT--LIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 90 y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~--l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
...--+++..+..+-+.+++.+|.+.---.=+.-.+-+++.++ ++++++.+++|++.++++.+|+.+...+
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 3344567888889999999998776665555544445666666 4799999999999999999999997654
No 50
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=95.42 E-value=0.7 Score=41.71 Aligned_cols=67 Identities=13% Similarity=0.059 Sum_probs=57.6
Q ss_pred HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
+....+-.+-+.++++++....-+.-..-|+...++++++++++.++.+++..+++..|+.+...+.
T Consensus 223 ~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 223 VATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 3445566788889999988888888888888889999999999999999999999999999887764
No 51
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=95.11 E-value=0.27 Score=43.99 Aligned_cols=63 Identities=6% Similarity=0.058 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHH
Q 024538 94 SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSI 156 (266)
Q Consensus 94 s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~l 156 (266)
.+....+..+-++++++++...........|+...++++++++++.++.++++.+++.+|+.+
T Consensus 218 ~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 218 GLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 455566778889999999987777777778888999999999999999999999999999975
No 52
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=94.99 E-value=0.67 Score=35.97 Aligned_cols=73 Identities=8% Similarity=0.039 Sum_probs=60.0
Q ss_pred hHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhh-cchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 88 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKC-AKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS-~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
......-+.+..+..+=..|++.+|..+---.-+ ...+-+.+.++++++++.++.+++...++.+|++.....
T Consensus 31 ~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 31 WPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3344556777778888888999999887665554 467788999999999999999999999999999998665
No 53
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=94.97 E-value=0.82 Score=41.24 Aligned_cols=69 Identities=6% Similarity=0.072 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 92 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 92 ~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
..++....+..+-++++++++-..--+.-...|+...++++++++++.++.++...+++.+|+.+...+
T Consensus 218 ~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 218 AAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345567788999999999999999999999999999999999999999999999999998888887765
No 54
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=94.90 E-value=0.47 Score=42.90 Aligned_cols=114 Identities=14% Similarity=0.179 Sum_probs=74.4
Q ss_pred chHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHc
Q 024538 123 KMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFK 202 (266)
Q Consensus 123 k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~ 202 (266)
.|+..++.|.+++|+|.++.|+++|++-++||..-+... .+.+...+.+.+.. |+++... |
T Consensus 108 nPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~-----------g~lpwval~la~sf----~~Ygl~R----K 168 (293)
T COG2962 108 NPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL-----------GSLPWVALALALSF----GLYGLLR----K 168 (293)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-----------CCCcHHHHHHHHHH----HHHHHHH----H
Confidence 367788899999999999999999999999999877652 14455444444332 4444443 5
Q ss_pred cCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHH-hChHHHHHHHHHHHhhh
Q 024538 203 GYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFFDVALLSTVSD 258 (266)
Q Consensus 203 ~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~-~~p~~~~~~~~~s~~~a 258 (266)
+-+.+..+-+.-.-++-++.++..+++.++-.+ |.. +++.....+.+-+..++
T Consensus 169 ~~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~vTa 222 (293)
T COG2962 169 KLKVDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGLVTA 222 (293)
T ss_pred hcCCchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhHHHH
Confidence 567777777777777777777776655443332 444 45554444444344333
No 55
>PRK11689 aromatic amino acid exporter; Provisional
Probab=94.86 E-value=1.2 Score=40.03 Aligned_cols=69 Identities=10% Similarity=-0.024 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 92 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 92 ~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
..++....+-.+-|+++|+++...-.+.=...|+...++++++.+++.+..+++..+++..|+.+....
T Consensus 220 ~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 220 LAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 334556667888899999999998888888889999999999999999999999999999999988765
No 56
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.68 E-value=0.37 Score=41.49 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHH
Q 024538 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSI 156 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~l 156 (266)
..+.+.......+-+..++|.+-.+..+.-+...+.+.++++++++++.+..+++++.++..|+.+
T Consensus 156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 344566777778889999999999999999999999999999999999999999999999988754
No 57
>COG2510 Predicted membrane protein [Function unknown]
Probab=94.67 E-value=0.16 Score=40.53 Aligned_cols=71 Identities=11% Similarity=0.173 Sum_probs=53.5
Q ss_pred hHHHHH-HHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhh
Q 024538 88 YKYCLV-SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI 158 (266)
Q Consensus 88 ~~y~~~-s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~ 158 (266)
+.|... ++....+-.+=+.|++-=+.|-.+=.-+..++.+.+++++++|+|.+..+++.+.++++|+++..
T Consensus 67 ~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 67 WLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred ehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 345544 44445555566778876555555545566788899999999999999999999999999998754
No 58
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=94.20 E-value=0.89 Score=35.09 Aligned_cols=74 Identities=15% Similarity=0.076 Sum_probs=60.9
Q ss_pred hhHHHHHHHHHHHHHHHhHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 87 VYKYCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~-~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
.+.....-+.+..+-.+=-.|+|++|..+ |-+.---..+-+.+.|+++++++.+..+++...++.+|++.--..
T Consensus 30 ~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 30 LWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 34556667777888888888999988876 455566667789999999999999999999999999999876554
No 59
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=94.17 E-value=0.38 Score=37.32 Aligned_cols=70 Identities=13% Similarity=0.114 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHHhHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHh
Q 024538 88 YKYCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF 157 (266)
Q Consensus 88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~-~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf 157 (266)
......-..+..+-++=..|+|++|..+ +-+.-....+-+.+.++++++++.++.|++...++..|++..
T Consensus 36 ~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 36 IYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 3455667777888888889999988875 345555667889999999999999999999999999999874
No 60
>PRK11431 multidrug efflux system protein; Provisional
Probab=94.11 E-value=0.46 Score=36.58 Aligned_cols=74 Identities=11% Similarity=0.030 Sum_probs=60.6
Q ss_pred hhHHHHHHHHHHHHHHHhHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 87 VYKYCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~-~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
+......-..+..+.++=..|+|.+|..+ +-+.-.-..+-+.+.++++++++.++.+++...++..|++.-...
T Consensus 29 ~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 29 LTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 34455667788888888889999988875 445555677889999999999999999999999999999986543
No 61
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=93.25 E-value=4.4 Score=36.77 Aligned_cols=127 Identities=11% Similarity=0.103 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCC-----CCCcchhHHHHHHHHH
Q 024538 23 VSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAI-----DPVAPVYKYCLVSMSN 97 (266)
Q Consensus 23 ~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~-----~~~~p~~~y~~~s~~~ 97 (266)
+.++-.+|..||....++.-.. ...+ +.+++.-...+.+++.+..... .+..........+...
T Consensus 153 al~la~sf~~Ygl~RK~~~v~a----~~g~-------~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vT 221 (293)
T COG2962 153 ALALALSFGLYGLLRKKLKVDA----LTGL-------TLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVT 221 (293)
T ss_pred HHHHHHHHHHHHHHHHhcCCch----HHhH-------HHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHH
Confidence 4455678999998777664221 1111 2455556666666665433211 2334455667778888
Q ss_pred HHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 98 ILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 98 ~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
.....+-..|-+.+|+++-=+..=-.|+-..+.+++++++.++..|+++-+.+-.|+++++.+
T Consensus 222 avpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d 284 (293)
T COG2962 222 AVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID 284 (293)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999988887777777888999999999999999999999999999876
No 62
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=92.80 E-value=5.4 Score=34.65 Aligned_cols=74 Identities=18% Similarity=0.157 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHH-HHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 87 VYKYCLVSMSNI-LTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 87 ~~~y~~~s~~~~-~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
+......++... .+..+-+.+++.++.......-...++..+++++++.+++.+..+++..+++..|+.+....
T Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 334445555555 47888899999999998888777778888888999999999999999999999999987655
No 63
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=90.89 E-value=0.5 Score=36.91 Aligned_cols=70 Identities=11% Similarity=0.108 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHHhHHhhhcCChhHHHHH-hhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHh
Q 024538 88 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF 157 (266)
Q Consensus 88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~-KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf 157 (266)
++|..+=..|..++..=+..|..-|.+.-+-. -|..-+.+.+.++++.+|.-+++.++.+.++..|+++.
T Consensus 42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 57777778888888888888888777665544 58889999999999999999999999999999999763
No 64
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=90.74 E-value=1.1 Score=41.35 Aligned_cols=141 Identities=13% Similarity=0.049 Sum_probs=97.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHH-HHHH-hhhcCC------CCCcch
Q 024538 16 VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA-GTLI-ASRKAI------DPVAPV 87 (266)
Q Consensus 16 ~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~-~~~~-~~~~~~------~~~~p~ 87 (266)
.+.-.+++.+-..++....+++|++.+.+ +++.+.... ...+.-++.+.-. .... ..+... ....+.
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~----~~~~~~~~l-l~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSK----GESLNSMNL-LYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF 235 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhcc----ccccCchHH-HHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh
Confidence 34455666667778888899999999743 233333222 2222222222211 2111 111111 222334
Q ss_pred hHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 88 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
......+++...-+..++..+..+|-=|++++-..|-+.+..+++++++++.++.+.+..++-.+|+.+....+
T Consensus 236 ~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k 309 (316)
T KOG1441|consen 236 LILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK 309 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence 45566678888889999999999999999999999999999999999999999999999999999999887663
No 65
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=87.79 E-value=5 Score=29.84 Aligned_cols=60 Identities=15% Similarity=0.104 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhHHhhhcCChhHH-HHHhhcchHHHHHHHHHHhccccChhhHHHHHHH
Q 024538 91 CLVSMSNILTTTCQYEALKYVSFPVQ-TLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLV 150 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~yvs~p~~-~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~i 150 (266)
...-.++..+..+=..|+|++|.++- -+.-....+-+.+.+.++++++.++.|++...++
T Consensus 33 ~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 33 ILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp -HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33444788888888999999887764 4455577888999999999999999999988765
No 66
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=86.22 E-value=12 Score=34.05 Aligned_cols=133 Identities=18% Similarity=0.255 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCc--eeehHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCCcchhHHH
Q 024538 19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEY--FKYSLFLVFCNRLMTSAVSAGTLIASRK-----AIDPVAPVYKYC 91 (266)
Q Consensus 19 l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~--F~~~~fL~~~q~~~~~l~~~~~~~~~~~-----~~~~~~p~~~y~ 91 (266)
-...+.|-..+=..-|-+||+++|...+++.|. .+|.+-+.+. + .-+..+++ ..-.+.|++.|-
T Consensus 191 Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vfl-------f--~~mvlTge~f~a~~fcaehp~~tyG 261 (367)
T KOG1582|consen 191 GVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFL-------F--APMVLTGELFSAWTFCAEHPVRTYG 261 (367)
T ss_pred eHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHH-------H--HHHHhcccchhhhHHHHhCcHhHHH
Confidence 345667777777788999999998654433443 2333222211 1 11112221 111235666553
Q ss_pred HHHHHHHHHHHHh-HHhhhc---CChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 92 LVSMSNILTTTCQ-YEALKY---VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 92 ~~s~~~~~a~~~~-n~aL~y---vs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
.. ++...+.+++ +..|.. -.-++-...-..+=..+.+++++++.|.++.....+-.++..|+.+=++++
T Consensus 262 y~-~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 262 YA-FLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HH-HHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 22 2222222222 111211 122333333334455678899999999999999999999999999998885
No 67
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=85.24 E-value=5.8 Score=35.78 Aligned_cols=70 Identities=11% Similarity=0.038 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHhHHhhh-cCChhHHHHHhhcchHHHHHHHHHHhccccChhhH----HHHHHHHHhhHHhhcc
Q 024538 91 CLVSMSNILTTTCQYEALK-YVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDY----FLALLVTLGCSIFILF 160 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~-yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~----~~v~~it~Gv~lf~~~ 160 (266)
...++....+..+=..+++ +++..+.-+.-..-|+...+++++++|++.+++|+ +..+++..|+.+-.++
T Consensus 215 ~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 215 ILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred HHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 3466666666666668888 89988888877777888999999999999999999 9999999998876543
No 68
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=84.45 E-value=7.4 Score=36.66 Aligned_cols=128 Identities=20% Similarity=0.207 Sum_probs=72.0
Q ss_pred HHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHH---HHhhhcCCCCCcch-hHHHHHHHHHH----HHHH
Q 024538 31 VIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGT---LIASRKAIDPVAPV-YKYCLVSMSNI----LTTT 102 (266)
Q Consensus 31 l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~---~~~~~~~~~~~~p~-~~y~~~s~~~~----~a~~ 102 (266)
+.||++---+ |++-+++|++-.-++|..+.. +++.+..... +-..+.. +-..|- .++..+-+.+. .+=+
T Consensus 257 ~~YavY~vll-k~~~~~eg~rvdi~lffGfvG-LfnllllwP~l~iL~~~~~e-~F~lP~~~q~~~vv~~~ligtvvSDy 333 (416)
T KOG2765|consen 257 LLYAVYTVLL-KRKIGDEGERVDIQLFFGFVG-LFNLLLLWPPLIILDFFGEE-RFELPSSTQFSLVVFNNLIGTVVSDY 333 (416)
T ss_pred HHHHHHHHHH-HhhcccccccccHHHHHHHHH-HHHHHHHhHHHHHHHHhccC-cccCCCCceeEeeeHhhHHHHHHHHH
Confidence 4444443333 333344567888888888776 3444443321 1122321 111221 12222222223 3333
Q ss_pred HhHHhhhcCChhHHHHHhhcchHH-HHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC
Q 024538 103 CQYEALKYVSFPVQTLAKCAKMIP-VMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS 162 (266)
Q Consensus 103 ~~n~aL~yvs~p~~~l~KS~k~ip-vmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~ 162 (266)
+--+|.-.-+--+.++ --+-.|| -|+...++.+|.|++..+++...+-+|-++..+.+.
T Consensus 334 lW~~a~~lTs~Lv~Tl-gmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 334 LWAKAVLLTSPLVVTL-GMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HHHHHHHhccchhhee-eeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 3333443344334444 3444667 788899999999999999999999999999988754
No 69
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=79.02 E-value=38 Score=29.81 Aligned_cols=120 Identities=17% Similarity=0.067 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHH-HHHHHHHHHHHHhhhc-CCCCCcchh----HHHHHH
Q 024538 21 FAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNR-LMTSAVSAGTLIASRK-AIDPVAPVY----KYCLVS 94 (266)
Q Consensus 21 ~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~-~~~~l~~~~~~~~~~~-~~~~~~p~~----~y~~~s 94 (266)
.++..--.+-..-|++.||+.|.+ + .+...--.|. +.+.+.+.+....... ..++.--+. .-+.+.
T Consensus 117 ~~vl~~~~~S~~agVy~E~~lK~~------~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i 188 (244)
T PF04142_consen 117 LAVLAAAFLSGFAGVYFEKLLKRS------N--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVI 188 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc------c--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHH
Confidence 333334445566788999999863 1 3444444443 3333333333322221 111111111 123344
Q ss_pred HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHH
Q 024538 95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLAL 148 (266)
Q Consensus 95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~ 148 (266)
+.+...-.+-...+||.+==+...+-++.++-+.+.++++++.+.+..-.+++.
T Consensus 189 ~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 189 FLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred HHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 566666677777999999999999999999999999999999998887666544
No 70
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=77.40 E-value=53 Score=29.33 Aligned_cols=143 Identities=13% Similarity=-0.000 Sum_probs=93.3
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHH-HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHH
Q 024538 54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVS-MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT 132 (266)
Q Consensus 54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s-~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~ 132 (266)
.+++..++++....+++.+....++. .++..++.++ .+.+.++.+.--+.|.+....-++.=++ ..++.||
T Consensus 26 Dg~~fQw~~~~~i~~~g~~v~~~~~~-----p~f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s---~n~l~Gw 97 (254)
T PF07857_consen 26 DGFFFQWVMCSGIFLVGLVVNLILGF-----PPFYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGS---VNCLTGW 97 (254)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCC-----CcceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHH---HHHHHHH
Confidence 36777777777777777766554432 2456676665 7778888888888888888887776665 3455555
Q ss_pred HHhc----------cccChhhHHHHHHHHHhhHHhhccCCCCCC---CC-------C------CC-----C----C----
Q 024538 133 LIMQ----------KRYKGYDYFLALLVTLGCSIFILFPSGADL---SP-------Y------SK-----G----R---- 173 (266)
Q Consensus 133 l~~~----------kry~~~~~~~v~~it~Gv~lf~~~~~~~~~---~~-------~------~~-----~----~---- 173 (266)
...| -+.++..|+.++++.+|.++|..-+++.+. +. + ++ + +
T Consensus 98 ~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~ 177 (254)
T PF07857_consen 98 ASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDELSP 177 (254)
T ss_pred HHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCcccccccccccccccccccccccccccccccccccc
Confidence 5432 145678899999999999998774332100 00 0 00 0 0
Q ss_pred -ccchhhHHHHHHHHHHhHhHHHHHHHHHccC
Q 024538 174 -ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY 204 (266)
Q Consensus 174 -~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~ 204 (266)
++.+.|+++.+++=++.|.+-+=-+.+.++.
T Consensus 178 ~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 178 RKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred ccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 1457899999999999888665555555443
No 71
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=76.83 E-value=37 Score=27.21 Aligned_cols=101 Identities=9% Similarity=0.099 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhc-C--CCCCcchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHH-hhcchHHHHHH
Q 024538 55 SLFLVFCNRLMTSAVSAGTLIASRK-A--IDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIW 130 (266)
Q Consensus 55 ~~fL~~~q~~~~~l~~~~~~~~~~~-~--~~~~~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~-KS~k~ipvmi~ 130 (266)
|..=++..+....+...+.....++ + .-++.|++.|. -+++-..-..+++.+...+....-++. =...++.-++.
T Consensus 30 ~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~i 108 (138)
T PF04657_consen 30 PLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLI 108 (138)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555555554444332 1 12356777776 555555556666666676666554432 22334444555
Q ss_pred HHH----HhccccChhhHHHHHHHHHhhHH
Q 024538 131 GTL----IMQKRYKGYDYFLALLVTLGCSI 156 (266)
Q Consensus 131 ~~l----~~~kry~~~~~~~v~~it~Gv~l 156 (266)
+.+ ..+++.++++.+.+.++.+|+.+
T Consensus 109 D~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 109 DHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 443 34689999999999999999864
No 72
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=66.77 E-value=12 Score=33.17 Aligned_cols=76 Identities=8% Similarity=0.138 Sum_probs=56.9
Q ss_pred cchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 85 APVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 85 ~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
.-+++....+++.+..-++-..-..+-+.-+--+.-..+-.++.+.++++++...+.+||+...++-.|+..=+..
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~ 314 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD 314 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence 3466777888888888877777666644433333334455678999999999999999999999999888775554
No 73
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=66.00 E-value=23 Score=31.79 Aligned_cols=59 Identities=8% Similarity=-0.014 Sum_probs=52.9
Q ss_pred HHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538 102 TCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF 160 (266)
Q Consensus 102 ~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~ 160 (266)
.+...||+.+|-++.-+.-|--|..-.+.|+++.+++.+..||++...+..+.+-.++.
T Consensus 225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt 283 (292)
T COG5006 225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLT 283 (292)
T ss_pred HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence 46678999999999999999999999999999999999999999999999888766655
No 74
>PRK13499 rhamnose-proton symporter; Provisional
Probab=56.40 E-value=1.7e+02 Score=27.29 Aligned_cols=104 Identities=13% Similarity=-0.038 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHhHHhhhcCChhHHHHHhh-cchHHHHHHHHHHhcc-------ccChhhHHHHHHHHHhhHHhhccCC
Q 024538 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKC-AKMIPVMIWGTLIMQK-------RYKGYDYFLALLVTLGCSIFILFPS 162 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS-~k~ipvmi~~~l~~~k-------ry~~~~~~~v~~it~Gv~lf~~~~~ 162 (266)
..-+++-.........+.||+.++.-+-.-- ..++-.-+++.+++++ +--..-.++++++.+|+++..++..
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4557788888999999999966554321111 1122233334444332 1113467889999999999998432
Q ss_pred CCCCCCCC--CCCccchhhHHHHHHHHHHhHhHH
Q 024538 163 GADLSPYS--KGRENTVWGVSLMVGYLGFDGFTS 194 (266)
Q Consensus 163 ~~~~~~~~--~~~~~~~~G~~ll~~sl~~dg~~~ 194 (266)
.+|++.+. +++.+..-|+++++++-+..+..+
T Consensus 157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred hcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 22211111 123456679999999999999988
No 75
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=56.24 E-value=1.8e+02 Score=27.29 Aligned_cols=71 Identities=20% Similarity=0.246 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
+.+.+.+...-.+...-.||-+==.+.-.-|+.++-+.+.++.+++++.+..=.+.+.++...+.++...+
T Consensus 254 w~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P 324 (345)
T KOG2234|consen 254 WLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYP 324 (345)
T ss_pred HHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCC
Confidence 44556666666777778888888888888888899999999999999999988888888888777777544
No 76
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=54.01 E-value=56 Score=24.15 Aligned_cols=61 Identities=7% Similarity=0.032 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhh
Q 024538 16 VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASR 78 (266)
Q Consensus 16 ~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~ 78 (266)
.+.+.....+.|.+|.+-.-+.-.++..+-. +| ..+..+.+.+.|.+++++.+.++..+-+
T Consensus 18 ~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~-~G-~~t~g~~~g~~~~~~~~~l~~~Yv~~An 78 (91)
T PF04341_consen 18 AWPLSAIFLVLYFGFVLLSAFAPELMATPVF-PG-SLTLGIVLGLGQIVFAWVLTWLYVRRAN 78 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHcCccc-CC-CcCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3567778888888888877777555555432 23 6889999999999999999888875433
No 77
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=50.42 E-value=1.9e+02 Score=26.07 Aligned_cols=151 Identities=10% Similarity=0.016 Sum_probs=99.0
Q ss_pred chhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCC
Q 024538 86 PVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGAD 165 (266)
Q Consensus 86 p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~ 165 (266)
.++....-+.+....+.+=|.|++-+|..+-+-.--..|+-+.+++ .| +.++.+.+.+-..|+.+-.-...+
T Consensus 70 ~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sR--r~~d~vwvaLAvlGi~lL~p~~~~-- 141 (292)
T COG5006 70 QRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SR--RLRDFVWVALAVLGIWLLLPLGQS-- 141 (292)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----cc--chhhHHHHHHHHHHHHhheeccCC--
Confidence 4455667788999999999999999999999998888888776654 34 356766677777788766543211
Q ss_pred CCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHc-cCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhCh
Q 024538 166 LSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFK-GYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHL 244 (266)
Q Consensus 166 ~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~-~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p 244 (266)
..+-++.|..+.+.+-.|=+.+-..-+|.-+ .++ ...+-.=-.++.++.++.-+... .++ ..+|
T Consensus 142 ------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g---~~g~a~gm~vAaviv~Pig~~~a--g~~----l~~p 206 (292)
T COG5006 142 ------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEHG---TAGVAVGMLVAALIVLPIGAAQA--GPA----LFSP 206 (292)
T ss_pred ------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCC---chHHHHHHHHHHHHHhhhhhhhc--chh----hcCh
Confidence 1367889999999999998888888877774 233 22333333344444444322211 111 3566
Q ss_pred HHHHHHHHHHHhhhh
Q 024538 245 DCFFDVALLSTVSDL 259 (266)
Q Consensus 245 ~~~~~~~~~s~~~a~ 259 (266)
+++..-++-+++|+.
T Consensus 207 ~ll~laLgvavlSSa 221 (292)
T COG5006 207 SLLPLALGVAVLSSA 221 (292)
T ss_pred HHHHHHHHHHHHhcc
Confidence 666665555655543
No 78
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=49.73 E-value=2e+02 Score=25.96 Aligned_cols=58 Identities=7% Similarity=0.025 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHH
Q 024538 88 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYF 145 (266)
Q Consensus 88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~ 145 (266)
++=...++....++.+...|-+.+.+.+--.+..+.++.--+.|.+++|++=+++|..
T Consensus 196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~ 253 (269)
T PF06800_consen 196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMI 253 (269)
T ss_pred HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHH
Confidence 4446667777777777777776654444444444457777788888888777777664
No 79
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=39.74 E-value=39 Score=26.21 Aligned_cols=72 Identities=14% Similarity=0.202 Sum_probs=56.8
Q ss_pred hhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHH-hhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhh
Q 024538 87 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI 158 (266)
Q Consensus 87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~-KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~ 158 (266)
.++|.++=.++-.++.+=+.-|..-|.+.-+=. .|...+++.+.|..+..+.--.+..+...++++|+.+..
T Consensus 52 ~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 52 NWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 367888888888888888888888666554433 445667799999999888888888899999999987653
No 80
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=34.55 E-value=35 Score=27.13 Aligned_cols=50 Identities=18% Similarity=0.210 Sum_probs=37.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHH
Q 024538 13 DSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAV 69 (266)
Q Consensus 13 ~~~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~ 69 (266)
..+.+++++|+....++-..+.++..+++.. .-+|+.||+-......+.+
T Consensus 52 ~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~-------m~NY~fFL~QlTt~gyvpI 101 (130)
T PF08627_consen 52 SKENFKLLVYVVVYVVSGVINRVLYKKMTNP-------MKNYPFFLNQLTTFGYVPI 101 (130)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHHHhh-------cccchHHHHHhcccceehH
Confidence 4567889999999999999999999998853 2358888875544433333
No 81
>PRK13499 rhamnose-proton symporter; Provisional
Probab=34.53 E-value=2.5e+02 Score=26.21 Aligned_cols=80 Identities=9% Similarity=0.008 Sum_probs=51.3
Q ss_pred cchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHH--HHH---HHHhhCcHHHHHHHHH-hChHHHH
Q 024538 175 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVL--SLS---GLILEGHLFLAIDFVY-HHLDCFF 248 (266)
Q Consensus 175 ~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~--~~~---~~~~~g~~~~~~~f~~-~~p~~~~ 248 (266)
+...|++.+.++.+|.|.-.+-|. +++.-++|.. +. ..+... ..+ ..+..+++. +..+ .+|..+.
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K----~~k~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~---~~~~~~~~~~~~ 74 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFK----KVKKWSWETM-WS-VGGIFSWLILPWLIAALLLPDFW---AYYSSFSGSTLL 74 (345)
T ss_pred hhHHHHHHHHHHHHHhhccccccc----ccCCCchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHH---HHHHhcCHHHHH
Confidence 456899999999999999999884 4544456666 33 222211 112 223333333 3343 6778777
Q ss_pred HHHHHHHhhhhhhhh
Q 024538 249 DVALLSTVSDLCFII 263 (266)
Q Consensus 249 ~~~~~s~~~a~Gq~~ 263 (266)
.-+...+.=++||+.
T Consensus 75 ~~~l~G~~W~iG~i~ 89 (345)
T PRK13499 75 PVFLFGALWGIGGIT 89 (345)
T ss_pred HHHHHHHHHHhhhhh
Confidence 777778888888875
No 82
>PRK02237 hypothetical protein; Provisional
Probab=33.01 E-value=87 Score=24.26 Aligned_cols=35 Identities=17% Similarity=0.419 Sum_probs=30.5
Q ss_pred HHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 127 VMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 127 vmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
-++.++.+-++|.+..|+..+.+..+|+.+-++.+
T Consensus 73 Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 73 SLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 35678889999999999999999999998887763
No 83
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=32.37 E-value=66 Score=23.69 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=23.5
Q ss_pred HhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHh
Q 024538 191 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL 229 (266)
Q Consensus 191 g~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~ 229 (266)
|.....+++..++ .++.+..++....+.+ .++....
T Consensus 4 a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~ 39 (126)
T PF00892_consen 4 AIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLI 39 (126)
T ss_pred eeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHh
Confidence 5566677777765 5677788887777776 4444333
No 84
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=31.66 E-value=3.4e+02 Score=23.36 Aligned_cols=52 Identities=12% Similarity=0.051 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCc
Q 024538 178 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGH 232 (266)
Q Consensus 178 ~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~ 232 (266)
.|+.+++++.++=|..+..... .. +.++.+..++=..++.++..+.+...++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~ 53 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQ 53 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3889999999999999998865 32 4889999999999998887776655554
No 85
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=30.88 E-value=82 Score=24.33 Aligned_cols=34 Identities=26% Similarity=0.610 Sum_probs=30.3
Q ss_pred HHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 128 MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 128 mi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
++.++.+-++|++..|++...++.+|+.+..+.+
T Consensus 72 l~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 72 LLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 5678889999999999999999999999887763
No 86
>PF15345 TMEM51: Transmembrane protein 51
Probab=30.16 E-value=98 Score=27.24 Aligned_cols=18 Identities=11% Similarity=0.110 Sum_probs=14.6
Q ss_pred hHHHHHHHHHhhHHhhcc
Q 024538 143 DYFLALLVTLGCSIFILF 160 (266)
Q Consensus 143 ~~~~v~~it~Gv~lf~~~ 160 (266)
--+.+.++++||++.++.
T Consensus 10 ~AiG~Gml~LGiiM~vW~ 27 (233)
T PF15345_consen 10 TAIGVGMLALGIIMIVWN 27 (233)
T ss_pred HHHhHhHHHHhhHheeee
Confidence 456789999999998774
No 87
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=29.69 E-value=1.4e+02 Score=27.54 Aligned_cols=74 Identities=11% Similarity=0.060 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC
Q 024538 89 KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS 162 (266)
Q Consensus 89 ~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~ 162 (266)
....-+++-++-++++....++.|--++.+.-.-...++-+.+.+.++++.++...++..+-.+|-++.++...
T Consensus 230 ~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~ 303 (314)
T KOG1444|consen 230 VMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATF 303 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhh
Confidence 34566777888889999999999988888877555667888888899999999999999999999999988753
No 88
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=27.86 E-value=2.2e+02 Score=26.43 Aligned_cols=72 Identities=10% Similarity=0.219 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 90 y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
|..=-+.....-..+..|+.|-|-+..+-.-+...+...+++..+.++|.++...+++++..+|-.+-....
T Consensus 67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha 138 (335)
T KOG2922|consen 67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA 138 (335)
T ss_pred HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence 344345667788889999999999999888888999999999999999999888888888877776555543
No 89
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=26.70 E-value=5.4e+02 Score=24.17 Aligned_cols=42 Identities=12% Similarity=0.192 Sum_probs=30.8
Q ss_pred HHHHHHhHhHHHHHHHHHccCCCC--hhhHHHHhhHHHHHHHHH
Q 024538 184 VGYLGFDGFTSTFQDKLFKGYDME--IHNQIFYTTLCSCVLSLS 225 (266)
Q Consensus 184 ~~sl~~dg~~~~~qe~~~~~~~~~--~~e~m~~~n~~~~~~~~~ 225 (266)
.++...|.+++++-+++++.|+.+ ....+|...+.+..+..+
T Consensus 44 ~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~ 87 (354)
T PF05631_consen 44 LLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGT 87 (354)
T ss_pred HHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 446789999999999999999876 445556666666555443
No 90
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=25.50 E-value=23 Score=32.22 Aligned_cols=72 Identities=7% Similarity=0.094 Sum_probs=0.0
Q ss_pred HhccccC-hhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHH
Q 024538 134 IMQKRYK-GYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQI 212 (266)
Q Consensus 134 ~~~kry~-~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m 212 (266)
++|||.- ..-.++.+++..-+.+.++-.-. .+.-..|++++++-+.+-=..+.|.+ ++++|+.+.|..+
T Consensus 71 lF~RrLLCPLGlLCiilimi~lLv~~L~tLt---------GQ~LF~Gi~~l~l~~lLaL~vW~Ym~-lLr~~GAs~WtiL 140 (381)
T PF05297_consen 71 LFKRRLLCPLGLLCIILIMIVLLVSMLWTLT---------GQTLFVGIVILFLCCLLALGVWFYMW-LLRELGASFWTIL 140 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhhcCcchHHHHHHHHHHHHHHHHHHhh---------ccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhHHHHHH
Confidence 3455543 34455555554444444443110 24456798888877777666777755 8899999988887
Q ss_pred HHh
Q 024538 213 FYT 215 (266)
Q Consensus 213 ~~~ 215 (266)
-+.
T Consensus 141 aFc 143 (381)
T PF05297_consen 141 AFC 143 (381)
T ss_dssp ---
T ss_pred HHH
Confidence 544
No 91
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.60 E-value=2.2e+02 Score=21.54 Aligned_cols=25 Identities=28% Similarity=0.612 Sum_probs=19.6
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhhhhc
Q 024538 15 RVLKMIFAVSGIMTTLVIYGILQEKIM 41 (266)
Q Consensus 15 ~~~~l~~~~~Gi~~~~l~~g~~qE~i~ 41 (266)
++-|+++.++||.++ +||+.||.+.
T Consensus 26 r~~q~ilti~aiVg~--i~Gf~~Qqls 50 (101)
T KOG4112|consen 26 RFQQLILTIGAIVGF--IYGFAQQQLS 50 (101)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 467899999999886 5787777653
No 92
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=22.32 E-value=1.3e+02 Score=26.65 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538 89 KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP 161 (266)
Q Consensus 89 ~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~ 161 (266)
..++.+++.++.++++-+.++-.|-.++-+.-...-.|..+-|.++++..-++.++++.++=....++..++.
T Consensus 226 am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavak 298 (309)
T COG5070 226 AMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAK 298 (309)
T ss_pred HHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788999999999999999999999999999899999999999999999999999988888888887774
No 93
>COG3274 Predicted O-acyltransferase [General function prediction only]
Probab=21.04 E-value=6e+02 Score=23.66 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=59.5
Q ss_pred CcchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChh--hHHHHHHHHHhhHHhhcc
Q 024538 84 VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGY--DYFLALLVTLGCSIFILF 160 (266)
Q Consensus 84 ~~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~--~~~~v~~it~Gv~lf~~~ 160 (266)
+.+...|...-+.+..+.....-.+.+.+.+..+-..-++.++=.+.|..+..|+--.+ .+++..+.++|++.-..+
T Consensus 143 ~~~i~~~~l~I~~~~~~l~~~~~~~~~~~~~l~~~~~~f~yi~Y~ilG~~l~~~~~~~~~~~~~a~~l~~~~~~~t~v~ 221 (332)
T COG3274 143 KLLILIYLLLIVFNASTLPFLYGGFSWLPIDLYIYGDTFYYILYYILGRYLGTRQTQGKKISRLALALFVLGVIFTFVG 221 (332)
T ss_pred HHHHHHHHHHhhhhcccchhhhcccccCCcchhhhCCchHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 34555666666666677777777788889999999999999998888887776665555 889999999999876655
Done!