Query 024539
Match_columns 266
No_of_seqs 115 out of 439
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 10:02:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024539.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024539hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 3.1E-95 1.1E-99 650.0 24.4 237 6-242 3-241 (248)
2 3ubw_A 14-3-3E, 14-3-3 protein 100.0 5.3E-95 1.8E-99 651.2 25.0 237 1-237 25-261 (261)
3 3iqu_A 14-3-3 protein sigma; s 100.0 8.4E-95 2.9E-99 643.6 22.9 230 6-235 7-236 (236)
4 1o9d_A 14-3-3-like protein C; 100.0 1.4E-93 4.8E-98 644.1 24.7 242 3-244 4-247 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 1.5E-92 5.2E-97 629.8 25.0 233 4-236 2-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 1.1E-91 3.7E-96 631.4 24.6 233 4-237 25-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 4E-88 1.4E-92 608.1 16.3 227 6-240 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 2.8E-80 9.7E-85 546.3 20.9 215 6-232 2-226 (227)
9 3edt_B KLC 2, kinesin light ch 96.1 0.15 5E-06 41.9 13.4 75 122-207 127-201 (283)
10 3vtx_A MAMA; tetratricopeptide 95.7 0.53 1.8E-05 36.7 17.2 160 9-203 7-169 (184)
11 3nf1_A KLC 1, kinesin light ch 95.7 0.79 2.7E-05 38.1 20.9 185 8-207 28-227 (311)
12 3n71_A Histone lysine methyltr 93.7 0.97 3.3E-05 43.3 13.4 100 94-207 326-425 (490)
13 3u3w_A Transcriptional activat 93.3 3.5 0.00012 35.1 18.3 74 122-207 155-228 (293)
14 3u4t_A TPR repeat-containing p 93.1 2.6 9E-05 34.4 13.7 53 150-203 197-249 (272)
15 3ro2_A PINS homolog, G-protein 92.9 3.4 0.00012 34.1 19.2 191 7-207 5-215 (338)
16 3qwp_A SET and MYND domain-con 92.6 0.71 2.4E-05 43.3 10.5 58 149-207 346-403 (429)
17 3qww_A SET and MYND domain-con 92.4 0.79 2.7E-05 43.2 10.6 100 94-207 315-414 (433)
18 3hym_B Cell division cycle pro 92.4 4.2 0.00014 33.9 14.9 45 149-202 253-297 (330)
19 3fp2_A TPR repeat-containing p 92.2 6.4 0.00022 35.6 16.7 49 148-205 444-492 (537)
20 3edt_B KLC 2, kinesin light ch 92.1 1 3.6E-05 36.6 9.8 94 99-206 23-116 (283)
21 1fch_A Peroxisomal targeting s 92.0 4.9 0.00017 34.3 14.5 58 9-68 100-157 (368)
22 4i17_A Hypothetical protein; T 92.0 4 0.00014 32.8 13.2 60 8-68 8-67 (228)
23 3ieg_A DNAJ homolog subfamily 91.4 5.7 0.00019 33.3 17.8 46 149-203 289-334 (359)
24 4a1s_A PINS, partner of inscut 91.4 6.8 0.00023 34.1 22.3 191 8-207 49-255 (411)
25 3qww_A SET and MYND domain-con 91.0 1.1 3.7E-05 42.2 9.8 58 149-207 315-372 (433)
26 4g1t_A Interferon-induced prot 90.7 8.7 0.0003 34.2 17.0 49 149-202 351-399 (472)
27 3ulq_A Response regulator aspa 90.5 8.4 0.00029 33.7 16.8 175 12-206 108-295 (383)
28 3n71_A Histone lysine methyltr 90.2 1.3 4.5E-05 42.4 9.8 58 149-207 326-383 (490)
29 2gw1_A Mitochondrial precursor 89.8 10 0.00036 33.8 15.0 55 148-203 205-265 (514)
30 4abn_A Tetratricopeptide repea 89.0 14 0.00049 34.1 16.8 173 8-203 103-286 (474)
31 3ro3_A PINS homolog, G-protein 88.8 5.3 0.00018 29.0 13.9 149 9-205 11-159 (164)
32 3sf4_A G-protein-signaling mod 88.7 11 0.00037 32.4 19.1 54 149-205 204-257 (406)
33 3ulq_A Response regulator aspa 88.5 12 0.00041 32.7 15.4 74 121-206 142-215 (383)
34 3sf4_A G-protein-signaling mod 88.3 11 0.00039 32.2 22.2 190 9-207 11-219 (406)
35 2y4t_A DNAJ homolog subfamily 87.7 14 0.00048 32.5 15.6 46 149-203 312-357 (450)
36 2q7f_A YRRB protein; TPR, prot 87.3 9.5 0.00032 30.2 16.6 59 8-68 58-116 (243)
37 4a1s_A PINS, partner of inscut 87.3 14 0.00048 32.1 18.1 178 10-206 89-294 (411)
38 3qwp_A SET and MYND domain-con 87.1 1.6 5.6E-05 40.8 7.9 58 149-207 304-361 (429)
39 4gcn_A Protein STI-1; structur 86.9 1.9 6.4E-05 32.4 6.8 48 149-205 25-72 (127)
40 3q15_A PSP28, response regulat 86.8 3.7 0.00013 36.2 9.8 75 119-206 98-172 (378)
41 2gw1_A Mitochondrial precursor 86.3 18 0.0006 32.2 15.4 171 9-204 306-478 (514)
42 2y4t_A DNAJ homolog subfamily 86.0 17 0.00059 31.9 17.3 167 10-203 146-323 (450)
43 3ro2_A PINS homolog, G-protein 85.9 13 0.00045 30.4 19.0 55 149-206 200-254 (338)
44 2xpi_A Anaphase-promoting comp 85.5 22 0.00075 32.6 18.8 47 148-203 532-578 (597)
45 2ho1_A Type 4 fimbrial biogene 85.1 13 0.00045 29.7 15.4 165 8-203 38-203 (252)
46 2qfc_A PLCR protein; TPR, HTH, 84.9 17 0.00056 30.7 19.9 189 8-218 76-276 (293)
47 2xpi_A Anaphase-promoting comp 84.8 24 0.00081 32.4 19.3 55 148-204 491-545 (597)
48 4eqf_A PEX5-related protein; a 84.4 19 0.00064 30.8 17.8 59 8-68 66-124 (365)
49 4b4t_Q 26S proteasome regulato 84.2 21 0.00071 31.3 18.6 184 10-207 58-248 (434)
50 1fch_A Peroxisomal targeting s 84.0 19 0.00064 30.5 18.6 58 8-67 65-122 (368)
51 3q15_A PSP28, response regulat 83.0 23 0.00079 30.9 18.0 175 11-205 105-291 (378)
52 4eqf_A PEX5-related protein; a 82.9 21 0.00073 30.4 16.2 59 8-68 100-158 (365)
53 4gyw_A UDP-N-acetylglucosamine 82.9 40 0.0014 33.5 17.3 166 8-209 10-179 (723)
54 2pl2_A Hypothetical conserved 82.6 18 0.0006 29.2 13.7 58 8-67 6-63 (217)
55 2vq2_A PILW, putative fimbrial 82.5 15 0.00052 28.4 16.6 167 8-204 9-176 (225)
56 3qky_A Outer membrane assembly 81.8 20 0.00068 29.3 18.7 64 7-71 15-80 (261)
57 3fp2_A TPR repeat-containing p 81.8 29 0.00099 31.1 17.6 54 150-203 213-271 (537)
58 2qfc_A PLCR protein; TPR, HTH, 81.5 6 0.0002 33.6 8.5 73 121-205 154-226 (293)
59 3ieg_A DNAJ homolog subfamily 81.2 22 0.00077 29.5 18.6 168 11-204 124-301 (359)
60 3u3w_A Transcriptional activat 81.2 9.4 0.00032 32.3 9.6 90 102-205 93-185 (293)
61 3rkv_A Putative peptidylprolyl 80.6 2.3 7.9E-05 32.6 5.0 54 149-203 28-91 (162)
62 3u4t_A TPR repeat-containing p 80.5 15 0.00051 29.7 10.3 59 8-68 4-62 (272)
63 2ifu_A Gamma-SNAP; membrane fu 80.4 23 0.00079 30.2 12.0 51 149-202 172-222 (307)
64 3cv0_A Peroxisome targeting si 80.3 23 0.00079 29.1 16.4 44 8-52 22-65 (327)
65 3hym_B Cell division cycle pro 80.3 23 0.0008 29.1 17.3 55 149-204 210-265 (330)
66 1qqe_A Vesicular transport pro 78.6 29 0.001 29.3 12.8 52 148-203 134-186 (292)
67 4gco_A Protein STI-1; structur 78.3 6.4 0.00022 29.3 6.8 46 149-203 30-75 (126)
68 1elr_A TPR2A-domain of HOP; HO 77.6 14 0.00047 25.8 8.2 53 149-203 55-107 (131)
69 3lf9_A 4E10_D0_1IS1A_001_C (T1 77.5 12 0.00042 29.3 8.2 86 21-111 11-103 (121)
70 3ro3_A PINS homolog, G-protein 77.4 11 0.00039 27.1 7.9 56 149-207 66-121 (164)
71 3nf1_A KLC 1, kinesin light ch 77.0 28 0.00097 28.3 20.3 181 9-204 71-307 (311)
72 2q7f_A YRRB protein; TPR, prot 76.9 25 0.00086 27.6 12.1 59 9-69 25-83 (243)
73 3uq3_A Heat shock protein STI1 76.7 26 0.00088 27.7 18.9 57 8-67 6-62 (258)
74 4gcn_A Protein STI-1; structur 74.7 8.7 0.0003 28.5 6.7 52 149-202 59-110 (127)
75 2pl2_A Hypothetical conserved 73.6 33 0.0011 27.5 17.3 45 8-53 40-84 (217)
76 4g1t_A Interferon-induced prot 73.5 7.1 0.00024 34.8 6.9 54 149-203 68-122 (472)
77 3uq3_A Heat shock protein STI1 73.5 31 0.0011 27.1 16.0 32 8-39 80-111 (258)
78 2l6j_A TPR repeat-containing p 72.2 12 0.00042 25.6 6.6 45 149-202 21-65 (111)
79 2e2e_A Formate-dependent nitri 72.0 30 0.001 26.2 12.4 46 149-203 98-143 (177)
80 3gw4_A Uncharacterized protein 70.9 14 0.00047 28.4 7.3 75 120-206 64-138 (203)
81 1na3_A Designed protein CTPR2; 70.6 17 0.00057 23.9 6.8 46 149-203 26-71 (91)
82 3k9i_A BH0479 protein; putativ 69.6 15 0.00052 26.3 6.8 47 149-204 44-90 (117)
83 3ma5_A Tetratricopeptide repea 69.6 26 0.00088 24.5 11.0 58 8-67 8-65 (100)
84 2xev_A YBGF; tetratricopeptide 67.6 24 0.00082 24.9 7.6 49 149-203 56-104 (129)
85 2kck_A TPR repeat; tetratricop 67.6 20 0.00067 24.2 6.8 46 149-203 23-68 (112)
86 3upv_A Heat shock protein STI1 67.4 31 0.0011 24.5 12.2 48 149-205 55-102 (126)
87 2kat_A Uncharacterized protein 67.1 30 0.001 24.3 12.0 59 8-68 20-78 (115)
88 2hr2_A Hypothetical protein; a 66.7 20 0.0007 29.0 7.5 54 148-203 27-85 (159)
89 2dba_A Smooth muscle cell asso 66.5 15 0.0005 26.5 6.2 50 149-204 45-94 (148)
90 2kc7_A BFR218_protein; tetratr 65.6 24 0.00082 23.9 6.9 47 149-203 17-63 (99)
91 3sz7_A HSC70 cochaperone (SGT) 65.5 41 0.0014 25.3 14.3 31 9-39 13-43 (164)
92 2fbn_A 70 kDa peptidylprolyl i 65.2 46 0.0016 25.8 12.1 31 9-39 40-70 (198)
93 2ho1_A Type 4 fimbrial biogene 63.8 53 0.0018 26.0 16.4 61 8-70 72-132 (252)
94 3cv0_A Peroxisome targeting si 63.1 61 0.0021 26.5 18.1 33 8-40 56-88 (327)
95 4gfq_A Ribosome-recycling fact 62.6 20 0.00067 30.7 6.9 73 38-111 127-199 (209)
96 4gco_A Protein STI-1; structur 61.9 25 0.00084 26.0 6.8 46 149-203 64-109 (126)
97 2vgx_A Chaperone SYCD; alterna 61.7 26 0.00089 26.6 7.1 47 149-204 72-118 (148)
98 3sz7_A HSC70 cochaperone (SGT) 61.6 48 0.0017 24.8 11.4 59 9-69 47-105 (164)
99 3as5_A MAMA; tetratricopeptide 60.8 47 0.0016 24.4 16.4 58 9-68 10-67 (186)
100 1w3b_A UDP-N-acetylglucosamine 60.7 80 0.0027 27.0 15.4 32 9-40 69-100 (388)
101 1xnf_A Lipoprotein NLPI; TPR, 60.5 63 0.0021 25.7 15.4 49 150-203 195-243 (275)
102 3bee_A Putative YFRE protein; 60.2 11 0.00039 27.1 4.5 31 9-39 45-75 (93)
103 2lni_A Stress-induced-phosphop 59.9 31 0.001 24.1 6.8 46 149-203 67-112 (133)
104 3ma5_A Tetratricopeptide repea 59.8 41 0.0014 23.4 9.6 72 149-235 24-95 (100)
105 2xcb_A PCRH, regulatory protei 59.5 50 0.0017 24.3 8.8 48 149-205 69-116 (142)
106 2v5f_A Prolyl 4-hydroxylase su 58.8 46 0.0016 23.7 7.9 53 149-203 22-74 (104)
107 1lyp_A CAP18; lipopolysacchari 58.1 21 0.00071 20.9 4.3 26 83-108 4-29 (32)
108 3vtx_A MAMA; tetratricopeptide 57.8 29 0.001 26.3 6.8 46 149-203 22-67 (184)
109 2h6f_A Protein farnesyltransfe 57.8 1.1E+02 0.0037 27.6 14.8 58 8-67 98-156 (382)
110 1xnf_A Lipoprotein NLPI; TPR, 57.6 67 0.0023 25.5 9.3 47 148-203 93-139 (275)
111 1dd5_A Ribosome recycling fact 57.1 29 0.001 29.0 7.0 73 38-111 103-175 (185)
112 3k9i_A BH0479 protein; putativ 57.0 49 0.0017 23.4 8.9 59 8-68 28-86 (117)
113 2kat_A Uncharacterized protein 56.8 43 0.0015 23.4 7.2 49 149-206 36-84 (115)
114 4ga2_A E3 SUMO-protein ligase 56.6 28 0.00096 26.3 6.4 31 10-40 34-64 (150)
115 2ifu_A Gamma-SNAP; membrane fu 56.4 91 0.0031 26.3 15.8 54 148-205 131-185 (307)
116 2xcb_A PCRH, regulatory protei 55.6 58 0.002 23.9 10.8 32 8-39 19-50 (142)
117 1ise_A Ribosome recycling fact 55.3 31 0.0011 28.9 6.8 73 38-111 103-175 (185)
118 1is1_A Ribosome recycling fact 54.5 32 0.0011 28.7 6.8 73 38-111 103-175 (185)
119 1elw_A TPR1-domain of HOP; HOP 54.3 37 0.0013 22.8 6.3 45 149-202 55-99 (118)
120 1qqe_A Vesicular transport pro 54.1 35 0.0012 28.8 7.2 54 149-205 54-107 (292)
121 2vyi_A SGTA protein; chaperone 53.8 46 0.0016 22.8 6.8 46 149-203 29-74 (131)
122 2yhc_A BAMD, UPF0169 lipoprote 53.7 83 0.0028 25.1 19.7 62 8-70 5-68 (225)
123 1wqg_A Ribosome recycling fact 53.5 35 0.0012 28.6 6.8 69 38-111 103-175 (185)
124 2vyi_A SGTA protein; chaperone 53.4 47 0.0016 22.7 6.8 47 149-204 63-109 (131)
125 1elw_A TPR1-domain of HOP; HOP 53.2 48 0.0017 22.2 6.8 47 149-204 21-67 (118)
126 1ya0_A SMG-7 transcript varian 52.5 49 0.0017 31.6 8.6 47 128-186 158-210 (497)
127 1w3b_A UDP-N-acetylglucosamine 52.4 1.1E+02 0.0038 26.1 15.1 44 8-52 34-77 (388)
128 2h6f_A Protein farnesyltransfe 52.3 1.3E+02 0.0045 27.0 13.9 44 10-54 203-246 (382)
129 1ihg_A Cyclophilin 40; ppiase 52.3 13 0.00044 33.5 4.3 54 149-203 240-301 (370)
130 1a17_A Serine/threonine protei 52.1 45 0.0015 24.3 6.8 47 149-204 64-110 (166)
131 1eh1_A Ribosome recycling fact 51.9 31 0.0011 28.9 6.3 73 38-111 104-176 (185)
132 2dba_A Smooth muscle cell asso 51.4 48 0.0016 23.6 6.8 46 149-203 82-127 (148)
133 4ga2_A E3 SUMO-protein ligase 51.3 44 0.0015 25.1 6.8 46 149-203 48-93 (150)
134 2kck_A TPR repeat; tetratricop 51.0 52 0.0018 21.9 7.9 29 11-39 10-38 (112)
135 1ge9_A Ribosome recycling fact 49.9 64 0.0022 26.9 7.9 71 37-111 104-174 (184)
136 3gyz_A Chaperone protein IPGC; 49.7 39 0.0013 26.2 6.3 46 149-203 87-132 (151)
137 3gyz_A Chaperone protein IPGC; 49.6 87 0.003 24.1 9.4 46 7-53 36-81 (151)
138 1na0_A Designed protein CTPR3; 49.5 58 0.002 22.0 6.8 46 149-203 26-71 (125)
139 2hr2_A Hypothetical protein; a 46.7 36 0.0012 27.5 5.8 78 149-232 74-154 (159)
140 1na0_A Designed protein CTPR3; 46.6 64 0.0022 21.7 6.8 46 149-203 60-105 (125)
141 1kt0_A FKBP51, 51 kDa FK506-bi 46.6 31 0.0011 31.7 6.0 53 149-203 285-345 (457)
142 1elr_A TPR2A-domain of HOP; HO 46.2 59 0.002 22.2 6.4 41 9-51 81-121 (131)
143 1hh8_A P67PHOX, NCF-2, neutrop 46.1 56 0.0019 25.2 6.8 46 149-203 54-99 (213)
144 1p5q_A FKBP52, FK506-binding p 45.8 18 0.00061 31.7 4.1 28 173-201 195-222 (336)
145 3urz_A Uncharacterized protein 45.4 56 0.0019 25.9 6.8 33 7-39 4-36 (208)
146 4abn_A Tetratricopeptide repea 43.6 1.9E+02 0.0065 26.3 13.5 161 19-203 80-249 (474)
147 1wao_1 Serine/threonine protei 42.8 49 0.0017 30.7 6.8 15 188-202 87-101 (477)
148 2ond_A Cleavage stimulation fa 42.2 1.5E+02 0.0052 24.8 15.2 30 10-39 102-131 (308)
149 1hxi_A PEX5, peroxisome target 42.1 94 0.0032 22.3 8.3 58 8-67 18-75 (121)
150 2ooe_A Cleavage stimulation fa 42.0 31 0.0011 31.8 5.3 53 148-209 62-114 (530)
151 1xi4_A Clathrin heavy chain; a 41.8 3.5E+02 0.012 29.9 13.8 22 180-201 1285-1306(1630)
152 3as5_A MAMA; tetratricopeptide 41.5 81 0.0028 23.0 6.8 47 149-204 93-139 (186)
153 2l6j_A TPR repeat-containing p 40.3 80 0.0028 21.2 6.2 33 8-40 5-37 (111)
154 1zu2_A Mitochondrial import re 40.3 52 0.0018 26.5 5.8 95 128-236 42-143 (158)
155 2vgx_A Chaperone SYCD; alterna 40.1 1.1E+02 0.0039 22.7 9.3 44 8-52 22-65 (148)
156 2vq2_A PILW, putative fimbrial 39.8 1.2E+02 0.0041 22.9 16.8 62 9-71 44-105 (225)
157 1hh8_A P67PHOX, NCF-2, neutrop 39.6 1.3E+02 0.0043 23.1 13.0 53 149-202 88-148 (213)
158 2r5s_A Uncharacterized protein 39.6 67 0.0023 24.4 6.2 33 8-40 109-141 (176)
159 1na3_A Designed protein CTPR2; 39.6 53 0.0018 21.3 5.0 59 8-68 10-68 (91)
160 3onj_A T-snare VTI1; helix, HA 39.1 1.1E+02 0.0038 22.4 9.6 78 23-101 10-90 (97)
161 2c2l_A CHIP, carboxy terminus 38.8 50 0.0017 27.8 5.8 50 153-206 52-103 (281)
162 2kc7_A BFR218_protein; tetratr 38.8 48 0.0016 22.3 4.7 29 11-39 4-32 (99)
163 3gw4_A Uncharacterized protein 38.2 1.3E+02 0.0043 22.7 18.7 75 120-207 105-179 (203)
164 3qky_A Outer membrane assembly 36.7 1.6E+02 0.0056 23.6 16.3 64 8-71 53-125 (261)
165 3caz_A BAR protein; thermo-aci 34.6 2.1E+02 0.0073 24.2 10.8 111 13-164 100-210 (294)
166 2vsy_A XCC0866; transferase, g 33.4 2.9E+02 0.0098 25.4 15.0 32 8-39 24-55 (568)
167 2wh5_A Acyl-COA-binding domain 32.9 60 0.0021 24.6 4.7 36 21-56 10-46 (106)
168 2fbn_A 70 kDa peptidylprolyl i 32.3 1.1E+02 0.0037 23.6 6.5 59 8-68 89-147 (198)
169 2e2e_A Formate-dependent nitri 32.2 93 0.0032 23.3 5.9 48 149-204 61-110 (177)
170 2ond_A Cleavage stimulation fa 32.0 1.2E+02 0.0041 25.4 7.1 48 148-203 115-162 (308)
171 3qou_A Protein YBBN; thioredox 31.4 1.3E+02 0.0046 25.1 7.3 33 8-40 220-252 (287)
172 2yhc_A BAMD, UPF0169 lipoprote 31.3 1.9E+02 0.0066 22.8 8.0 46 8-53 42-89 (225)
173 3upv_A Heat shock protein STI1 30.9 1.4E+02 0.0046 20.9 10.2 58 8-67 5-62 (126)
174 3urz_A Uncharacterized protein 30.7 1.9E+02 0.0066 22.6 13.9 28 13-40 60-87 (208)
175 2xev_A YBGF; tetratricopeptide 30.6 1.3E+02 0.0046 20.7 9.8 57 10-67 5-63 (129)
176 3rkv_A Putative peptidylprolyl 30.5 1.6E+02 0.0055 21.6 12.6 70 149-235 80-149 (162)
177 4i17_A Hypothetical protein; T 30.1 1.9E+02 0.0066 22.4 14.8 59 8-68 43-101 (228)
178 4gyw_A UDP-N-acetylglucosamine 29.1 99 0.0034 30.7 6.8 46 149-203 94-139 (723)
179 1a17_A Serine/threonine protei 27.9 1.7E+02 0.0057 21.0 8.1 59 9-69 49-107 (166)
180 2wb7_A PT26-6P; extra chromoso 27.3 1.8E+02 0.006 28.2 7.8 52 136-189 436-488 (526)
181 2g0u_A Type III secretion syst 27.2 24 0.00084 26.3 1.5 61 118-185 4-68 (92)
182 1wao_1 Serine/threonine protei 27.0 1E+02 0.0034 28.5 6.1 8 151-158 59-66 (477)
183 2if4_A ATFKBP42; FKBP-like, al 26.7 53 0.0018 28.7 4.0 49 149-203 196-258 (338)
184 4h7y_A Dual specificity protei 26.3 73 0.0025 26.1 4.3 74 115-202 10-87 (161)
185 3ub0_A Non-structural protein 24.2 55 0.0019 27.5 3.2 39 148-206 19-57 (199)
186 2w9y_A CE-FAR-7, fatty acid/re 23.9 25 0.00087 28.2 1.1 74 95-171 61-136 (140)
187 1ouv_A Conserved hypothetical 22.3 3E+02 0.01 21.9 13.1 26 10-35 9-34 (273)
188 1p5q_A FKBP52, FK506-binding p 22.2 3.7E+02 0.013 23.0 12.4 58 9-68 198-255 (336)
189 3u64_A Protein TP_0956; tetrat 21.3 1.1E+02 0.0038 27.4 5.0 62 129-203 206-268 (301)
190 2c2l_A CHIP, carboxy terminus 21.2 1.2E+02 0.0042 25.3 5.1 31 8-38 5-35 (281)
191 3iyk_A VP5; icosahedral virus; 21.2 4.7E+02 0.016 25.1 9.4 188 21-229 121-337 (526)
192 3q49_B STIP1 homology and U bo 20.8 2.2E+02 0.0074 19.7 11.4 44 8-52 10-53 (137)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=3.1e-95 Score=650.05 Aligned_cols=237 Identities=62% Similarity=0.997 Sum_probs=223.7
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHH
Q 024539 6 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRI 85 (266)
Q Consensus 6 ~re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l 85 (266)
+|++++|+|||++||||||||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~~i 82 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMV 82 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999877888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC--hhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHh
Q 024539 86 KEYRQKVESELSDICNDIMTVIDEHLIPSASAG--ESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (266)
Q Consensus 86 ~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~ 163 (266)
++||++|++||..+|++||++||++|||.++++ ++||||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 83 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~ 162 (248)
T 3uzd_A 83 RAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISK 162 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccCCCCCC
Q 024539 164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDG 242 (266)
Q Consensus 164 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~~W~~e~~~~~ 242 (266)
++|||||||||||+||||||||||+|+|++||.||++|||+||+++|+|+|++|+|||+||||||||||+|+++.++++
T Consensus 163 ~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~~~ 241 (248)
T 3uzd_A 163 EHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDD 241 (248)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-------
T ss_pred hhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999876554
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=5.3e-95 Score=651.18 Aligned_cols=237 Identities=75% Similarity=1.135 Sum_probs=227.7
Q ss_pred CCCchhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchh
Q 024539 1 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV 80 (266)
Q Consensus 1 ~~~~~~re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 80 (266)
|.++.+|++++|+|||++||||||||+++||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.
T Consensus 25 ~~~m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~ 104 (261)
T 3ubw_A 25 MGSMDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 104 (261)
T ss_dssp -----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hhhhhhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH
Confidence 55567899999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHH
Q 024539 81 NAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATT 160 (266)
Q Consensus 81 ~~~~l~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~ 160 (266)
+++.+++||++|++||..+|++|+++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 105 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccC
Q 024539 161 AAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 237 (266)
Q Consensus 161 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~~W~~e 237 (266)
+|+++||||||+||||+||||||||||+|++++||.|||+|||+||+++|+|+|++|+|||+||||||||||+|+++
T Consensus 185 iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 185 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999974
No 3
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=8.4e-95 Score=643.58 Aligned_cols=230 Identities=59% Similarity=0.944 Sum_probs=227.0
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHH
Q 024539 6 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRI 85 (266)
Q Consensus 6 ~re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l 85 (266)
+|++++|+||||+||||||||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 7 ~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~~~i 86 (236)
T 3iqu_A 7 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEV 86 (236)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCSHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhcc
Q 024539 86 KEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEAD 165 (266)
Q Consensus 86 ~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~ 165 (266)
++||++|++||..+|++|+++||++|||.++++|+||||+|||||||||+|||..|++|++++++|+++|++|+++|+++
T Consensus 87 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~ 166 (236)
T 3iqu_A 87 REYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKE 166 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhc
Q 024539 166 LPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWT 235 (266)
Q Consensus 166 L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~~W~ 235 (266)
||||||+||||+||||||||||+|+|++||.+|++|||+||+++|+|+|++|+|||+||||||||||+||
T Consensus 167 L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 167 MPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=1.4e-93 Score=644.10 Aligned_cols=242 Identities=70% Similarity=1.085 Sum_probs=224.4
Q ss_pred CchhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchh
Q 024539 3 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLD--VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV 80 (266)
Q Consensus 3 ~~~~re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~--~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 80 (266)
++++|++++|+|||++|||||+||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.++++.
T Consensus 4 ~~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~ 83 (260)
T 1o9d_A 4 APTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEE 83 (260)
T ss_dssp -CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred ccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHH
Confidence 56689999999999999999999999999999998 9999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHH
Q 024539 81 NAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATT 160 (266)
Q Consensus 81 ~~~~l~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~ 160 (266)
+++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 84 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 163 (260)
T 1o9d_A 84 HVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD 163 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccCCCC
Q 024539 161 AAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE 240 (266)
Q Consensus 161 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~~W~~e~~~ 240 (266)
+|+.+||||||+||||+||||||||||+|++++||.||++|||+||+++|+|+|++|+|+|+||||||||||+|+++.++
T Consensus 164 iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~ 243 (260)
T 1o9d_A 164 IATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQD 243 (260)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC----
T ss_pred HHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCc
Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred CCch
Q 024539 241 DGED 244 (266)
Q Consensus 241 ~~~~ 244 (266)
++.+
T Consensus 244 ~~~~ 247 (260)
T 1o9d_A 244 DGAD 247 (260)
T ss_dssp ----
T ss_pred cccc
Confidence 6533
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=1.5e-92 Score=629.85 Aligned_cols=233 Identities=75% Similarity=1.138 Sum_probs=227.0
Q ss_pred chhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHH
Q 024539 4 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAK 83 (266)
Q Consensus 4 ~~~re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~ 83 (266)
|++|++++|+|||++|||||+||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~~ 81 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLK 81 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHHH
Confidence 34799999999999999999999999999999999999999999999999999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHh
Q 024539 84 RIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (266)
Q Consensus 84 ~l~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~ 163 (266)
.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 82 ~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~ 161 (234)
T 2br9_A 82 MIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAM 161 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhcc
Q 024539 164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTS 236 (266)
Q Consensus 164 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~~W~~ 236 (266)
.+||||||+||||+||||||||||+|++++||.||++|||+|++++|+|+|++|+|+|+||||||||||+|++
T Consensus 162 ~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 162 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=1.1e-91 Score=631.39 Aligned_cols=233 Identities=63% Similarity=0.997 Sum_probs=226.8
Q ss_pred chhHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchh
Q 024539 4 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLD---VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV 80 (266)
Q Consensus 4 ~~~re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~---~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 80 (266)
+++|++++|+|||++|||||+||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.++++.
T Consensus 25 ~~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~ 104 (260)
T 2npm_A 25 VNARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAED 104 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHH
Confidence 4579999999999999999999999999999988 9999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHH
Q 024539 81 NAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATT 160 (266)
Q Consensus 81 ~~~~l~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~ 160 (266)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 184 (260)
T 2npm_A 105 ASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATV 184 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccC
Q 024539 161 AAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 237 (266)
Q Consensus 161 ~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~~W~~e 237 (266)
+| .+||||||+||||+||||||||||+|++++||.||++|||+||+++|+|+|++|+|+|+|||||||||++|+++
T Consensus 185 iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 185 VA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=4e-88 Score=608.08 Aligned_cols=227 Identities=24% Similarity=0.410 Sum_probs=196.3
Q ss_pred hHHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hhhcc-hhhHH
Q 024539 6 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE-EAKGN-EVNAK 83 (266)
Q Consensus 6 ~re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~-~~~~~-~~~~~ 83 (266)
+|++++|+|||++||||||||+.+| ++.+++||.||||||||||||+||++|+|||+|++++|++ +.+|+ +.+++
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~~ 104 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQ 104 (268)
T ss_dssp ------------------CHHHHHH---TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---HhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHHH
Confidence 5999999999999999999999999 7889999999999999999999999999999999999999 67777 88899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHh
Q 024539 84 RIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (266)
Q Consensus 84 ~l~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~ 163 (266)
.+++||++|++||..+|++|+++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 105 ~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~ 183 (268)
T 3efz_A 105 VIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRER 183 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999999999999999999999999999998
Q ss_pred ccC--CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH---HHHhhcccCccchHhHHHHHHHHHhhHhhhccCC
Q 024539 164 ADL--PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE---AISELDTLNEESYKDSTLIMQLLRDNLTLWTSDI 238 (266)
Q Consensus 164 ~~L--~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~---Ai~~ld~l~ee~y~ds~~IlqLLrDNl~~W~~e~ 238 (266)
++| |||||||||||||||||||||+|+|++||.+||+|||+ ||+++|+|+|++ |+||||||||||+|+++.
T Consensus 184 ~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWtsd~ 259 (268)
T 3efz_A 184 SFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWEQGC 259 (268)
T ss_dssp HHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHTTTC
T ss_pred HhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhhccc
Confidence 889 99999999999999999999999999999999999999 999999999987 999999999999999986
Q ss_pred CC
Q 024539 239 PE 240 (266)
Q Consensus 239 ~~ 240 (266)
++
T Consensus 260 ~~ 261 (268)
T 3efz_A 260 SG 261 (268)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=2.8e-80 Score=546.33 Aligned_cols=215 Identities=22% Similarity=0.244 Sum_probs=199.2
Q ss_pred hHHhHH---HHHHHHHHhCCHHHHHHHHHHHHh----cCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcc
Q 024539 6 ERENFV---YVAKLAEQAERYDEMVDAMKNVAK----LDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGN 78 (266)
Q Consensus 6 ~re~l~---~~Aklaeq~eRy~Dmi~~mk~~i~----~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~ 78 (266)
+|++++ |+|||++||||||||+++||++++ .+++||.||||||||||||+||++|+|||+|++++|++ +|+
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~~ 79 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LNN 79 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cCC
Confidence 488999 999999999999999999999999 89999999999999999999999999999999999998 677
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHH
Q 024539 79 EVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETA 158 (266)
Q Consensus 79 ~~~~~~l~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A 158 (266)
+.+++.+++||++|++||..+|++|+++||++|||.+ |+||||+|||||||||+|||..|+ +++|+++|++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~A 151 (227)
T 2o8p_A 80 DELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQDA 151 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHHH
Confidence 7889999999999999999999999999999999987 999999999999999999999998 89999999999
Q ss_pred HHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH---HHhhcccCccchHhHHHHHHHHHhhHh
Q 024539 159 TTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA---ISELDTLNEESYKDSTLIMQLLRDNLT 232 (266)
Q Consensus 159 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~A---i~~ld~l~ee~y~ds~~IlqLLrDNl~ 232 (266)
+++|+++||||||+||||+||||||||||+|+|++||.+|++||+.+ +..-+ +.+.++++|+|+|+|||||.
T Consensus 152 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E--~m~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 152 FTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQE--NMDRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHC----
T ss_pred HHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccc--cchhHHHHHHHHHHHHHhcc
Confidence 99999899999999999999999999999999999999999999976 33333 33458889999999999985
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=96.05 E-value=0.15 Score=41.90 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=57.3
Q ss_pred HHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHH
Q 024539 122 VFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQA 201 (266)
Q Consensus 122 vfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~a 201 (266)
+..+...|..|...-. .+.|...|++|+.+++...++.+|.......|.+..++. +|+.++|+...+++
T Consensus 127 ~~~~~~la~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~ 195 (283)
T 3edt_B 127 AKQLNNLALLCQNQGK----------AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEI 195 (283)
T ss_dssp HHHHHHHHHHHHTTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 3344445666544322 357999999999998877888899888888888877776 69999999999999
Q ss_pred HHHHHH
Q 024539 202 FDEAIS 207 (266)
Q Consensus 202 fd~Ai~ 207 (266)
+..+-.
T Consensus 196 l~~~~~ 201 (283)
T 3edt_B 196 LTRAHE 201 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876543
No 10
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.73 E-value=0.53 Score=36.75 Aligned_cols=160 Identities=17% Similarity=0.169 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHH---HH
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAK---RI 85 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~---~l 85 (266)
-...++.+..+-|+|++++.+.+++++.+|.- .+=...+..+|-. .+....+...+........ ....... .+
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~ 82 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN-VETLLKLGKTYMD-IGLPNDAIESLKKFVVLDT--TSAEAYYILGSA 82 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCc--hhHHHHHHHHHH
Confidence 45668899999999999999999999988764 4445555555543 2344445444443222211 1111000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhcc
Q 024539 86 KEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEAD 165 (266)
Q Consensus 86 ~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~ 165 (266)
....... ++-...+..++. +-|. + .. .+...|..|.-+ |+ -+.|.+.|++|+++
T Consensus 83 ~~~~~~~-~~a~~~~~~a~~-----~~~~--~--~~--~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~---- 136 (184)
T 3vtx_A 83 NFMIDEK-QAAIDALQRAIA-----LNTV--Y--AD--AYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI---- 136 (184)
T ss_dssp HHHTTCH-HHHHHHHHHHHH-----HCTT--C--HH--HHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH----
T ss_pred HHHcCCH-HHHHHHHHHHHH-----hCcc--c--hH--HHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh----
Confidence 0000000 111112222221 2232 1 11 222345544322 11 35788999998865
Q ss_pred CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 166 LPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 166 L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
.|.+| ....|.+..|+ -+|+.++|+..-++|++
T Consensus 137 -~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 -KPGFI---RAYQSIGLAYE-GKGLRDEAVKYFKKALE 169 (184)
T ss_dssp -CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred -cchhh---hHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 34554 34455555555 47999999988777654
No 11
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.65 E-value=0.79 Score=38.15 Aligned_cols=185 Identities=14% Similarity=0.110 Sum_probs=103.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhc-------CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hh--hc
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKL-------DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE-EA--KG 77 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~-------~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~-~~--~~ 77 (266)
+-+..++.+....|+|++++.++++++.. +.+....=...+..+|-. .+....+...+....... .. ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 45667888999999999999999998864 222222333344444322 233344444443221110 00 00
Q ss_pred chhhH----HHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHH
Q 024539 78 NEVNA----KRIKEYR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSM 152 (266)
Q Consensus 78 ~~~~~----~~l~~yk-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~ 152 (266)
.+... ....-|. ..=-++-...+...+.+.....-+ +....+..+-..|..|...-. .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~---~~~~~~~~~~~la~~~~~~~~----------~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK---DHPDVAKQLNNLALLCQNQGK----------YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT---TCHHHHHHHHHHHHHHHTTTC----------HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCC---CChHHHHHHHHHHHHHHHcCC----------HHHHH
Confidence 01000 0000010 000122334444555554433222 122333333445555533311 36799
Q ss_pred HHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 153 KAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 153 ~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
..|++|+.+++...++.+|.......+.+..++. .|+.++|+...++++..+-.
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 9999999999877788889888888888877776 69999999999999876543
No 12
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=93.68 E-value=0.97 Score=43.31 Aligned_cols=100 Identities=6% Similarity=0.037 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcch
Q 024539 94 SELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIR 173 (266)
Q Consensus 94 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~Pir 173 (266)
+|-..+|...+.+-.+.|=|.. + ..+=-+.--|..|+..-. -+.|...|++|+++-+..|+|.||.-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~H--p-~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTN--L-YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--H-HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 4556677778877776664432 2 112222223444433321 25699999999999999999999999
Q ss_pred HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 174 LGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 174 LgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
+....|.++.|+. .|+.++|..+.++|+.--..
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999998886 69999999999999765444
No 13
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=93.27 E-value=3.5 Score=35.10 Aligned_cols=74 Identities=11% Similarity=0.117 Sum_probs=56.2
Q ss_pred HHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHH
Q 024539 122 VFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQA 201 (266)
Q Consensus 122 vfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~a 201 (266)
+-.+...|..|..+-. -++|...|++|+++++ .+|..+|....+..|.+..|++ +|+.++|+...++|
T Consensus 155 ~~~~~~lg~~y~~~g~----------~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~a 222 (293)
T 3u3w_A 155 LYIENAIANIYAENGY----------LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Confidence 3334456666644322 3679999999999986 4666777777788999998887 69999999999999
Q ss_pred HHHHHH
Q 024539 202 FDEAIS 207 (266)
Q Consensus 202 fd~Ai~ 207 (266)
++-+..
T Consensus 223 l~~~~~ 228 (293)
T 3u3w_A 223 IEISCR 228 (293)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887643
No 14
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=93.10 E-value=2.6 Score=34.43 Aligned_cols=53 Identities=11% Similarity=0.029 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 150 NSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 150 ~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
.|...|++|+++....-.+.++.......+.+.+| ...|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYY-TINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHh
Confidence 47889999999986432222222223444444444 457999999988777654
No 15
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=92.94 E-value=3.4 Score=34.13 Aligned_cols=191 Identities=10% Similarity=0.021 Sum_probs=99.9
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHH----HHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhH
Q 024539 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEE----RNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNA 82 (266)
Q Consensus 7 re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eE----RnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~ 82 (266)
-..+...+....+.|+|++++.++++++...|. +++. ...+..+|- ..+....+...+..........+.+...
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 346778899999999999999999999987655 2221 123333332 2233444444443221111111111100
Q ss_pred H-----HHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccc----------cChhHHH
Q 024539 83 K-----RIKEY-RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFK----------FGDEKKE 146 (266)
Q Consensus 83 ~-----~l~~y-k~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~~~ 146 (266)
. ...-| ...--++-...+...+.+... ..++...+..+...|..|...-... ...+-..
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 157 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRN 157 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHH
Confidence 0 00000 000112233444455544433 2233344445555677666554411 1122334
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 147 AAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 147 ~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
..+.|...|++|+.++.. .+ .+|.......+.+..+ .-.|+.++|+...+++++-+-.
T Consensus 158 ~~~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 158 ALQAAVDLYEENLSLVTA-LG-DRAAQGRAFGNLGNTH-YLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH-HT-CHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh-cC-CHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHh
Confidence 467888889999888864 22 2344444444444444 4579999999998888766543
No 16
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=92.56 E-value=0.71 Score=43.31 Aligned_cols=58 Identities=14% Similarity=0.085 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+.++|++--..
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999889999999999999999998877 69999999999988775544
No 17
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.44 E-value=0.79 Score=43.23 Aligned_cols=100 Identities=13% Similarity=0.085 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcch
Q 024539 94 SELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIR 173 (266)
Q Consensus 94 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~Pir 173 (266)
+|-..+|...+.+-.+.|=|.. + ..+=-+.--|.-|+..-. -+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~H--p-~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSN--V-YMLHMMYQAMGVCLYMQD----------WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhc--h-HHHHHHHHHHHHHHhhcC----------HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 4556677777777776665532 2 111111223333322211 25799999999999998999999999
Q ss_pred HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 174 LGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 174 LgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
.....|.+.-|+. .|+.++|..+-++|++--..
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHH
Confidence 9999999988776 69999999999988776554
No 18
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.39 E-value=4.2 Score=33.87 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~af 202 (266)
+.|...|++|+++. |.+| ....+.+..++ .+|+.++|+...++++
T Consensus 253 ~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 253 AEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 57889999998663 3343 23344555544 4799999988776654
No 19
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=92.22 E-value=6.4 Score=35.58 Aligned_cols=49 Identities=14% Similarity=0.107 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024539 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~A 205 (266)
.+.|...|++|+++ .|.+| ....+.+..++ -+|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 46788888888755 34555 34455555555 4799999999888876654
No 20
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=92.09 E-value=1 Score=36.60 Aligned_cols=94 Identities=16% Similarity=0.165 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhh
Q 024539 99 ICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLAL 178 (266)
Q Consensus 99 ~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaL 178 (266)
++...+++....+-+ +....+-.+...|..|...-. .+.|...|++|+.+++..+.+.+|.......
T Consensus 23 ~~~~al~~~~~~~~~---~~~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 23 LCKQALEDLEKTSGH---DHPDVATMLNILALVYRDQNK----------YKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp HHHHHHHHHHHHHCS---SSHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHHHHccc----------HHHHHHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 334444455444422 222334444456666654433 3579999999999998777888888777777
Q ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024539 179 NFSVFYYEIMNSPERACHLAKQAFDEAI 206 (266)
Q Consensus 179 N~SVF~yEi~~~~~~Ai~iAk~afd~Ai 206 (266)
+.+..++ ..|+.++|+...++|++.+-
T Consensus 90 ~l~~~~~-~~g~~~~A~~~~~~al~~~~ 116 (283)
T 3edt_B 90 NLAVLYG-KRGKYKEAEPLCKRALEIRE 116 (283)
T ss_dssp HHHHHHH-TTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhccHHHHHHHHHHHHHHHH
Confidence 7777666 47999999999999887653
No 21
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.00 E-value=4.9 Score=34.34 Aligned_cols=58 Identities=17% Similarity=0.269 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
-+..++.+....|+|++++.++++++..+|. +.+=...+..+|-. .+....+...+..
T Consensus 100 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 100 AWQYLGTTQAENEQELLAISALRRCLELKPD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4566778888888888888888888877665 34444455555443 3444455555543
No 22
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=91.98 E-value=4 Score=32.84 Aligned_cols=60 Identities=13% Similarity=0.031 Sum_probs=43.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
+.+..++.+..+.|+|++++.++.+++..+|.-+..-...+..+|-. .+....|.+.+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 56788899999999999999999999988874444444445555543 4555566666544
No 23
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=91.44 E-value=5.7 Score=33.34 Aligned_cols=46 Identities=11% Similarity=0.086 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+++ .|.+| ....+.+..++ ..|+.++|+...+++++
T Consensus 289 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 289 VEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 5678888888765 34443 34555555554 47999999887777653
No 24
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=91.36 E-value=6.8 Score=34.15 Aligned_cols=191 Identities=14% Similarity=0.084 Sum_probs=99.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchh-hH-
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV---EERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NA- 82 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~---eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~- 82 (266)
..+..++....+.|+|++++.++++++...+.-.. .=...+..+|- ..+....+...+....+.....+... ..
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 127 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAK 127 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHH
Confidence 45667888889999999999999999987665221 11233333333 23444455554433221111001110 00
Q ss_pred ---HHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhcc-------ccChhHHHHHHHH
Q 024539 83 ---KRIKEY-RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEF-------KFGDEKKEAAANS 151 (266)
Q Consensus 83 ---~~l~~y-k~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~~~~~~~~~~e~A 151 (266)
..-.-| ...=-++-...+..++.+.... .+....+..+...|..|...-.. ....+-....+.|
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A 202 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRA 202 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHH
Confidence 000000 0000123334445555544332 12223333444456555544330 0012223346789
Q ss_pred HHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 152 MKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 152 ~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
...|++|++++.. + +.+|.......+.+..++ -.|+.++|+...++++.-.-.
T Consensus 203 ~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 203 VEFYQENLKLMRD-L-GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHHHHHH-H-TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHh
Confidence 9999999998864 2 223444445555555544 579999999998888765543
No 25
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=90.95 E-value=1.1 Score=42.24 Aligned_cols=58 Identities=9% Similarity=0.015 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
+.|...|++|+++.+..|.|.||..+...-|.+.-|.. +|+.++|..+.++|+.--..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Confidence 56788999999999889999999999988888887776 79999999999999776554
No 26
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=90.73 E-value=8.7 Score=34.25 Aligned_cols=49 Identities=14% Similarity=0.132 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~af 202 (266)
++|...|++|+++ .|.++..-.+.+++..+++...|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5789999999853 344445556677888888778899999988766554
No 27
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=90.50 E-value=8.4 Score=33.72 Aligned_cols=175 Identities=7% Similarity=-0.033 Sum_probs=90.5
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH-----HHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcc-hhhHH--
Q 024539 12 YVAKLAEQAERYDEMVDAMKNVAKLDVELTV-----EERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGN-EVNAK-- 83 (266)
Q Consensus 12 ~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~-----eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~-~~~~~-- 83 (266)
+++.+....|+|++++.++++.+..-..... +=...+..+|-. .+..-.|...+.....--...+. .....
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 186 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLLQC 186 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 3788888899999999999999865333222 222334444333 23333333333221111000111 00000
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHH
Q 024539 84 -----RIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETA 158 (266)
Q Consensus 84 -----~l~~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A 158 (266)
.+-...... ++=...+...+.+.... .++......+.-.|..|..+-. -+.|...|++|
T Consensus 187 ~~~lg~~~~~~g~~-~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~a 250 (383)
T 3ulq_A 187 HSLFATNFLDLKQY-EDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFKRA 250 (383)
T ss_dssp HHHHHHHHHHTTCH-HHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHH
Confidence 000000000 12233344444444322 2233333333446666644322 36799999999
Q ss_pred HHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024539 159 TTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (266)
Q Consensus 159 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai 206 (266)
+++++..-. .|.......|.+..++. +|+.++|+...++|+.-+-
T Consensus 251 l~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 251 IAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 999875322 14444555566665554 7999999999998877654
No 28
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=90.25 E-value=1.3 Score=42.37 Aligned_cols=58 Identities=19% Similarity=0.123 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
+.|...|++|+++.+..|.|.||..+...-|.+..|.. .|+.++|..+.++|++--..
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHH
Confidence 45777899999999889999999999999999888876 69999999999999876544
No 29
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=89.76 E-value=10 Score=33.78 Aligned_cols=55 Identities=16% Similarity=0.108 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhccC--CCCC----cchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 148 AANSMKAYETATTAAEADL--PPTH----PIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L--~pt~----PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 4678888888887433223 4444 5556666666666655 6999999998887764
No 30
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=88.97 E-value=14 Score=34.11 Aligned_cols=173 Identities=18% Similarity=0.122 Sum_probs=90.0
Q ss_pred HhHHHHHHHHHHhCCH-HHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHHH
Q 024539 8 ENFVYVAKLAEQAERY-DEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIK 86 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy-~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l~ 86 (266)
.-+..++++....|+| ++++.+++++++.+|.. .+=...|..+|-.. +....|...+....+.... .......-.
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~~lg~ 178 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL-VEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQNLSM 178 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHHHHHH
Confidence 3456677777778888 88888888888776653 44555566555432 4444444444332211110 010111111
Q ss_pred HHHH----------HHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHH
Q 024539 87 EYRQ----------KVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYE 156 (266)
Q Consensus 87 ~yk~----------ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~ 156 (266)
-|.. .=-++-...++..+.+ -|. + ..+ +-..|..|.... +..+. ...-.+.|..+|+
T Consensus 179 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~--~--~~~--~~~lg~~~~~~~-~~~~~-~~g~~~~A~~~~~ 245 (474)
T 4abn_A 179 VLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVL--D--GRS--WYILGNAYLSLY-FNTGQ-NPKISQQALSAYA 245 (474)
T ss_dssp HHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTT--C--HHH--HHHHHHHHHHHH-HHTTC-CHHHHHHHHHHHH
T ss_pred HHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCC--C--HHH--HHHHHHHHHHHH-Hhhcc-ccchHHHHHHHHH
Confidence 1111 0112223344444432 232 1 222 223455554330 11122 1123578999999
Q ss_pred HHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 157 TATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 157 ~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 246 ~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 246 QAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 99876 23222555667777777776 6999999988777754
No 31
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=88.81 E-value=5.3 Score=28.97 Aligned_cols=149 Identities=11% Similarity=0.083 Sum_probs=78.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHHHHH
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEY 88 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l~~y 88 (266)
-+..++.+....|+|++++.++.+.++..+.... ......++ ..+..+-.. .++ ....+
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~--~~~~~~~~-----------~~l~~~~~~---~g~--~~~A~--- 69 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD--KAAERIAY-----------SNLGNAYIF---LGE--FETAS--- 69 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC--HHHHHHHH-----------HHHHHHHHH---TTC--HHHHH---
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC--chHHHHHH-----------HHHHHHHHH---cCC--HHHHH---
Confidence 3567888888999999999999998865332111 11111122 111111111 111 11122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCC
Q 024539 89 RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPP 168 (266)
Q Consensus 89 k~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~p 168 (266)
..+...+.+.... .++......+...|..|...-. -+.|...|++|++++.. .+
T Consensus 70 ---------~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~----------~~~A~~~~~~a~~~~~~-~~- 123 (164)
T 3ro3_A 70 ---------EYYKKTLLLARQL-----KDRAVEAQSCYSLGNTYTLLQD----------YEKAIDYHLKHLAIAQE-LK- 123 (164)
T ss_dssp ---------HHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-TT-
T ss_pred ---------HHHHHHHHHHHHh-----CCcHHHHHHHHHHHHHHHHHhh----------HHHHHHHHHHHHHHHHH-cc-
Confidence 2233333333221 1222333333344555543321 35789999999999864 22
Q ss_pred CCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024539 169 THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (266)
Q Consensus 169 t~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~A 205 (266)
.+|.......+.+..+ .-.|+.++|+...+++++-+
T Consensus 124 ~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 124 DRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp CHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHH
T ss_pred chHhHHHHHHHHHHHH-HHccCHHHHHHHHHHHHHHH
Confidence 2333334445555544 45799999999888877654
No 32
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=88.70 E-value=11 Score=32.37 Aligned_cols=54 Identities=17% Similarity=0.078 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~A 205 (266)
+.|...|++|+.++.. .+ .++.......|.+..+ ..+|+.++|+...+++++-.
T Consensus 204 ~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 204 RDAVIAHEQRLLIAKE-FG-DKAAERRAYSNLGNAY-IFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-cC-CcHHHHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHH
Confidence 5688888888888764 22 2222222334444444 44788888888887776544
No 33
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=88.53 E-value=12 Score=32.71 Aligned_cols=74 Identities=18% Similarity=0.106 Sum_probs=49.0
Q ss_pred HHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHH
Q 024539 121 TVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQ 200 (266)
Q Consensus 121 kvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~ 200 (266)
..-.+-..|..|..+-. .+.|...|++|+++... .+. .+.+.+.+++.--..|.-+|+.++|+...++
T Consensus 142 ~a~~~~~lg~~~~~~~~----------~~~A~~~~~~al~~~~~-~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 209 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQ----------TYFSMDYARQAYEIYKE-HEA-YNIRLLQCHSLFATNFLDLKQYEDAISHFQK 209 (383)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHT-CST-THHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-Ccc-chHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 44444456777665433 25799999999999964 433 2445555555444555568999999998888
Q ss_pred HHHHHH
Q 024539 201 AFDEAI 206 (266)
Q Consensus 201 afd~Ai 206 (266)
|++-+-
T Consensus 210 al~~~~ 215 (383)
T 3ulq_A 210 AYSMAE 215 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876643
No 34
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=88.33 E-value=11 Score=32.21 Aligned_cols=190 Identities=11% Similarity=0.030 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHH--
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV---EERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAK-- 83 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~---eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~-- 83 (266)
.+..++...-+.|+|++++.++.+++...|.-.. .=...+..+|-. .+....+...+.....-....+......
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 89 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGEAKA 89 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 4567888888999999999999999987665322 122234444332 3334444444432111111011111000
Q ss_pred ---HHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhc-------ccc---ChhHHHHHH
Q 024539 84 ---RIKEYR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAE-------FKF---GDEKKEAAA 149 (266)
Q Consensus 84 ---~l~~yk-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE-------~~~---~~~~~~~~e 149 (266)
...-|. ..=-++-...+...+.+.... .++...+..+-..|..|...-. ... ..+-....+
T Consensus 90 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~ 164 (406)
T 3sf4_A 90 SGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQ 164 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHH
Confidence 000010 000123334444555444332 1222223233334444443333 111 123344577
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 150 NSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 150 ~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
.|...|++|+.++.. . +.+|.......|.+..++ .+|+.++|+...++++.-+-.
T Consensus 165 ~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~ 219 (406)
T 3sf4_A 165 AAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAKE 219 (406)
T ss_dssp HHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHh
Confidence 899999999999864 3 234544445555555555 479999999998888766443
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=87.67 E-value=14 Score=32.48 Aligned_cols=46 Identities=11% Similarity=0.094 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+ .|.+| ....+.+..+. ..|+.++|+...++++.
T Consensus 312 ~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 312 VEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 5678888888755 34444 33444444444 57999999988887754
No 36
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=87.31 E-value=9.5 Score=30.18 Aligned_cols=59 Identities=8% Similarity=0.059 Sum_probs=34.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
.-+..++.+..+.|+|++++.++++++...|.. ..-...+..+|-. .+....+...+..
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSA-ATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc-hHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 345567777788888888888888888766542 3333334444432 3344445554443
No 37
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=87.25 E-value=14 Score=32.08 Aligned_cols=178 Identities=11% Similarity=0.044 Sum_probs=87.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC-----HHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchh----
Q 024539 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELT-----VEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV---- 80 (266)
Q Consensus 10 l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls-----~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~---- 80 (266)
+..++.+....|+|++++.++++++.....+. ..=...+..+|- ..+....+...+..........++..
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 167 (411)
T 4a1s_A 89 YSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEGR 167 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHHH
Confidence 55778888889999999999998876421111 112223333332 23334444444432211111011110
Q ss_pred ---hHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccC
Q 024539 81 ---NAKRIKEYRQK----------------VESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFG 141 (266)
Q Consensus 81 ---~~~~l~~yk~k----------------i~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~ 141 (266)
....+-..... .-++-...+...+.+.... .+.......+...|..|...-.
T Consensus 168 ~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~---- 238 (411)
T 4a1s_A 168 ALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD---- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC----
Confidence 00111111111 0133344555555554432 1223334444455665544322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024539 142 DEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (266)
Q Consensus 142 ~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai 206 (266)
.+.|...|++|+.++.. .+ ++...+.+++.-...|-..|+.++|+...+++++.+-
T Consensus 239 ------~~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 ------FQAAIEHHQERLRIARE-FG--DRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp ------HHHHHHHHHHHHHHHHH-HT--CHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred ------hHHHHHHHHHHHHHHHh-cC--CcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 24688888888888754 21 3333333443333444457888888888887776554
No 38
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=87.13 E-value=1.6 Score=40.82 Aligned_cols=58 Identities=9% Similarity=0.036 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
+.|...|++|+++.+..|+|.||..+...-|.+.-|.. .|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 45677788888777778999999999999998887766 79999999999999766544
No 39
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=86.86 E-value=1.9 Score=32.36 Aligned_cols=48 Identities=15% Similarity=0.254 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~A 205 (266)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.-.
T Consensus 25 ~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEVG 72 (127)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHhC
Confidence 6799999999865 45554 345677777776 799999999988887643
No 40
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=86.78 E-value=3.7 Score=36.16 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=51.5
Q ss_pred hhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHH
Q 024539 119 ESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLA 198 (266)
Q Consensus 119 eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iA 198 (266)
....+|+-.+|.++...-. -+.|...|++|+.++.. ++ .+|..-....|.+.+|+. +|+.++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 3445566678887754432 25789999999998853 43 334455555566666654 79999999999
Q ss_pred HHHHHHHH
Q 024539 199 KQAFDEAI 206 (266)
Q Consensus 199 k~afd~Ai 206 (266)
++|++-.-
T Consensus 165 ~~al~~~~ 172 (378)
T 3q15_A 165 LQALDIYQ 172 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877554
No 41
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=86.27 E-value=18 Score=32.23 Aligned_cols=171 Identities=9% Similarity=-0.048 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchh-hHHHHHH
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIKE 87 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~l~~ 87 (266)
-+..++.+....|+|++++.++++++...|.-. +-...+..+|- ..+....+...+......... +.. ......-
T Consensus 306 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~--~~~~~~~la~~ 381 (514)
T 2gw1_A 306 VYYHRGQMNFILQNYDQAGKDFDKAKELDPENI-FPYIQLACLAY-RENKFDDCETLFSEAKRKFPE--APEVPNFFAEI 381 (514)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCS-HHHHHHHHHTT-TTTCHHHHHHHHHHHHHHSTT--CSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhH-HHHHHHHHHHH-HcCCHHHHHHHHHHHHHHccc--CHHHHHHHHHH
Confidence 345677888888888888888888887766633 23333333332 234445555555443322111 111 1111111
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccC
Q 024539 88 YR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADL 166 (266)
Q Consensus 88 yk-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L 166 (266)
|. ..--++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+.+
T Consensus 382 ~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~----- 444 (514)
T 2gw1_A 382 LTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL----- 444 (514)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH-----
T ss_pred HHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh-----
Confidence 10 000112222333333322 221111111112222343332200 012 135788888888765
Q ss_pred CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 167 PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 167 ~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
.|.+| ....+.+..+. -.|+.++|+...+++++.
T Consensus 445 ~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 445 DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESADL 478 (514)
T ss_dssp CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 34444 33344444444 579999999888777653
No 42
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=86.05 E-value=17 Score=31.88 Aligned_cols=167 Identities=13% Similarity=0.082 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchh-hHHHHHHH
Q 024539 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIKEY 88 (266)
Q Consensus 10 l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~l~~y 88 (266)
...+|.+..+.|+|++++.++.+++...|. +..-...+..+|-. .+....+...+....+... .+.. ......-|
T Consensus 146 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~--~~~~~~~~l~~~~ 221 (450)
T 2y4t_A 146 LRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKN--DNTEAFYKISTLY 221 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHC--SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHH
Confidence 345577788899999999999999987665 34445555555533 3444455555544322211 1111 11111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc--CCCCCCChhHHHHHHh--------hcccccchhccccChhHHHHHHHHHHHHHHH
Q 024539 89 RQKVESELSDICNDIMTVIDEHL--IPSASAGESTVFFYKM--------KGDYYRYLAEFKFGDEKKEAAANSMKAYETA 158 (266)
Q Consensus 89 k~ki~~EL~~~C~eii~lId~~L--ip~~~~~eskvfy~Km--------kgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A 158 (266)
... .--.+.+..++..+ -|. +......+..+ .|+.|.- .| -.+.|...|++|
T Consensus 222 ~~~------g~~~~A~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g-----~~~~A~~~~~~~ 283 (450)
T 2y4t_A 222 YQL------GDHELSLSEVRECLKLDQD--HKRCFAHYKQVKKLNKLIESAEELIR-----DG-----RYTDATSKYESV 283 (450)
T ss_dssp HHT------TCHHHHHHHHHHHHHHCTT--CHHHHHHHHHHHHHHHHHHHHHHHHH-----HT-----CHHHHHHHHHHH
T ss_pred HHc------CCHHHHHHHHHHHHHhCCC--hHHHHHHHHHHHHHHHHHHHHHHHHH-----cC-----CHHHHHHHHHHH
Confidence 110 00112222222222 231 11111111111 1222211 11 135788888888
Q ss_pred HHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 159 TTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 159 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.+ .|.+|....-+++.-.-.|.-.|+.++|+...++++.
T Consensus 284 l~~-----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 284 MKT-----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred Hhc-----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 753 4667765444444434445568999999999888754
No 43
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=85.94 E-value=13 Score=30.43 Aligned_cols=55 Identities=16% Similarity=-0.005 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai 206 (266)
+.|...|++|++++.. . .+|...+.+++.-...|...|+.++|+...+++++..-
T Consensus 200 ~~A~~~~~~a~~~~~~-~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 200 RDAVIAHEQRLLIAKE-F--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHH-H--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 5788999999988864 2 23444444444444455567999999999888876543
No 44
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=85.47 E-value=22 Score=32.61 Aligned_cols=47 Identities=9% Similarity=0.107 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
.+.|...|++++++ .|.+| ....+.+.. |...|+.++|+...+++++
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 35788888888765 25555 233333333 4458999999988877665
No 45
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=85.10 E-value=13 Score=29.73 Aligned_cols=165 Identities=9% Similarity=0.021 Sum_probs=84.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchh-hHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIK 86 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~l~ 86 (266)
+-+..+|.+..+.|+|++++.++++++..+|.. .+-...+..+|-. .+....+...+....+... .+.. ......
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~--~~~~~~~~la~ 113 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS-ADAHAALAVVFQT-EMEPKLADEEYRKALASDS--RNARVLNNYGG 113 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCc--CcHHHHHHHHH
Confidence 345678888889999999999999999876653 4444445555433 3445555555544322211 1111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccC
Q 024539 87 EYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADL 166 (266)
Q Consensus 87 ~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L 166 (266)
-|.. ..--.+.+..+++.+- ....+.. ...+...|..|... |+ .+.|...|++|+...
T Consensus 114 ~~~~------~g~~~~A~~~~~~~~~-~~~~~~~-~~~~~~la~~~~~~-----g~-----~~~A~~~~~~~~~~~---- 171 (252)
T 2ho1_A 114 FLYE------QKRYEEAYQRLLEASQ-DTLYPER-SRVFENLGLVSLQM-----KK-----PAQAKEYFEKSLRLN---- 171 (252)
T ss_dssp HHHH------TTCHHHHHHHHHHHTT-CTTCTTH-HHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHC----
T ss_pred HHHH------HhHHHHHHHHHHHHHh-CccCccc-HHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHhcC----
Confidence 1111 1112344444444432 1112222 22223345554322 11 356788888887542
Q ss_pred CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 167 PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 167 ~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
|.+| ....+.+..++ ..|+.++|+...++++.
T Consensus 172 -~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 172 -RNQP---SVALEMADLLY-KEREYVPARQYYDLFAQ 203 (252)
T ss_dssp -SCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred -cccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 3333 23344444444 46899998887777643
No 46
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=84.94 E-value=17 Score=30.71 Aligned_cols=189 Identities=13% Similarity=0.031 Sum_probs=92.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-----hhhhhhhHHHHHHHHHHhhhhhhhcchhh-
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY-----KNVIGARRASWRILSSIEQKEEAKGNEVN- 81 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAy-----Kn~i~~~R~s~R~l~~ieqk~~~~~~~~~- 81 (266)
+.+...+...-..|+|++++.++++.++..+. ..+....+..-| -...+....|...+...........+...
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 154 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQN 154 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhccccC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHH
Confidence 34556677777889999999999998876655 333322221111 11122334455544321111000011110
Q ss_pred H----HHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHH
Q 024539 82 A----KRIKEYRQ-KVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYE 156 (266)
Q Consensus 82 ~----~~l~~yk~-ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~ 156 (266)
. ..-.-|.. .=-++-...++..+.+.+. .|. ++...+..+-..|..|..+-+ -+.|...|+
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~~~----------y~~Al~~~~ 220 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLDSR----------YEESLYQVN 220 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHHhh----------HHHHHHHHH
Confidence 0 00111110 1112334455555555542 231 122121222334555543222 367999999
Q ss_pred HHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHH-HHHHHHHHHHHHhhcccCccchH
Q 024539 157 TATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERAC-HLAKQAFDEAISELDTLNEESYK 218 (266)
Q Consensus 157 ~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai-~iAk~afd~Ai~~ld~l~ee~y~ 218 (266)
+|++++.. ..++..++.+++.--..|.-+|+.++|+ ...++| +.-.+.+....++
T Consensus 221 kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~A----l~~~~~~~~~~~~ 276 (293)
T 2qfc_A 221 KAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA----SFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH----HHHHHHTTCHHHH
T ss_pred HHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH----HHHHHHhCcHhhH
Confidence 99999853 2344455655554455556689999994 434444 4444445555553
No 47
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=84.77 E-value=24 Score=32.39 Aligned_cols=55 Identities=7% Similarity=0.008 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
.+.|.+.|++|+++... . +.+|-....+++.-...|...|+.++|+...+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46789999999988753 2 3466543333333344445589999999998887754
No 48
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=84.37 E-value=19 Score=30.84 Aligned_cols=59 Identities=10% Similarity=-0.055 Sum_probs=42.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
+.++.++....+.|+|++++.++++++..+|.- .+=...+..+|-. .+....|...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD-AEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC-HHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 357888999999999999999999999887653 4455555555543 3455556555544
No 49
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.21 E-value=21 Score=31.29 Aligned_cols=184 Identities=11% Similarity=0.040 Sum_probs=93.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHH-----HHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHH
Q 024539 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEE-----RNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKR 84 (266)
Q Consensus 10 l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eE-----RnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 84 (266)
+..++++....|+|++++++++++....+.++... ++++...+. ..+..-.+..............++......
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 66889999999999999999999887666665432 222222221 112222222222211111111111110111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHH
Q 024539 85 IKEYRQKVESELSDICNDIMTVIDEHL--IPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAA 162 (266)
Q Consensus 85 l~~yk~ki~~EL~~~C~eii~lId~~L--ip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a 162 (266)
+....-++-.+.- -..+.+.++...+ .+...+....+-++-..|..|.-+-. .++|...|++|..++
T Consensus 137 ~~~~la~~~~~~g-~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 137 LSIKLATLHYQKK-QYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRN----------LAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHT-CHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcc-ChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCc----------HHHHHHHHHHHHHHh
Confidence 1111111111111 1122223332221 12222333444444455555532211 357899999999998
Q ss_pred hccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 163 EADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 163 ~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
.. .+ ..|.-.|...+...-+|...++..+|+..-.++|+..-.
T Consensus 206 ~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 206 NS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp HH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred hc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 53 44 233444666666677777789999999988888876543
No 50
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=83.96 E-value=19 Score=30.55 Aligned_cols=58 Identities=10% Similarity=-0.052 Sum_probs=40.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~ 67 (266)
+.+..++.+..+.|+|++++.++++++..+|.- ..=...+..+|.. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH-MEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 457789999999999999999999999877653 4445555555443 233444444443
No 51
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=83.00 E-value=23 Score=30.88 Aligned_cols=175 Identities=7% Similarity=0.058 Sum_probs=86.8
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHH-----HHHHHHHHHhhhhhhhHHHHHHHHH-HhhhhhhhcchhhHHH
Q 024539 11 VYVAKLAEQAERYDEMVDAMKNVAKLDVELTVE-----ERNLLSVGYKNVIGARRASWRILSS-IEQKEEAKGNEVNAKR 84 (266)
Q Consensus 11 ~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~e-----ERnLLsvAyKn~i~~~R~s~R~l~~-ieqk~~~~~~~~~~~~ 84 (266)
.+++...-..|+|++++.++++.....+..... =..-++.+|-. .+....|...+.. ++-.............
T Consensus 105 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 183 (378)
T 3q15_A 105 FFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYH-MKQTHVSMYHILQALDIYQNHPLYSIRTIQ 183 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTSTTCHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHhCCCchhhHHH
Confidence 356777788899999999999988654333221 11223333322 2333333333322 1111100000100000
Q ss_pred H-----HHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHH
Q 024539 85 I-----KEYR-QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETA 158 (266)
Q Consensus 85 l-----~~yk-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A 158 (266)
+ .-|. ..=-++=...+...+++.... .++......+.-.|..|...-. .+.|...|++|
T Consensus 184 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~~a 248 (378)
T 3q15_A 184 SLFVIAGNYDDFKHYDKALPHLEAALELAMDI-----QNDRFIAISLLNIANSYDRSGD----------DQMAVEHFQKA 248 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHTC----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHH
Confidence 0 0000 000122233444445444321 1222233333335555533321 36799999999
Q ss_pred HHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024539 159 TTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (266)
Q Consensus 159 ~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~A 205 (266)
+++++.. .+|.......|.+..++. +|+.++|+...++|+.-+
T Consensus 249 l~~~~~~---~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 249 AKVSREK---VPDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHH---CGGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHhh---CChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 9998754 345554455566665554 799999999887776643
No 52
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=82.93 E-value=21 Score=30.44 Aligned_cols=59 Identities=15% Similarity=0.254 Sum_probs=40.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
.-+..++.+..+.|+|++++.++++++..+|.. ..-...+..+|.. .+....|...+..
T Consensus 100 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 158 (365)
T 4eqf_A 100 EAWQFLGITQAENENEQAAIVALQRCLELQPNN-LKALMALAVSYTN-TSHQQDACEALKN 158 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHc-cccHHHHHHHHHH
Confidence 345678899999999999999999999887654 3444555555543 3444555555543
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=82.88 E-value=40 Score=33.55 Aligned_cols=166 Identities=11% Similarity=0.092 Sum_probs=86.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH-Hhhhhhhhcchh-hHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS-IEQKEEAKGNEV-NAKRI 85 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~-ieqk~~~~~~~~-~~~~l 85 (266)
+-+..++.+..+.|+|++++.+.+++++.+|+.. +=.+-|..+|.. .+..-.|...+.. ++-+.. +.. ...+-
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~-~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~---~~~a~~nLg 84 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVFPEFA-AAHSNLASVLQQ-QGKLQEALMHYKEAIRISPT---FADAYSNMG 84 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH-HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTT---CHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCC---CHHHHHHHH
Confidence 5567889999999999999999999999988753 344555555543 2333444444332 111110 100 01100
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHh
Q 024539 86 KEYR--QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE 163 (266)
Q Consensus 86 ~~yk--~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~ 163 (266)
.-|. .+. ++=...++..++ +-|. . ..+++ ..|..|+-+-. .+.|..+|++|+++
T Consensus 85 ~~l~~~g~~-~~A~~~~~kAl~-----l~P~--~--~~a~~--~Lg~~~~~~g~----------~~eAi~~~~~Al~l-- 140 (723)
T 4gyw_A 85 NTLKEMQDV-QGALQCYTRAIQ-----INPA--F--ADAHS--NLASIHKDSGN----------IPEAIASYRTALKL-- 140 (723)
T ss_dssp HHHHHTTCH-HHHHHHHHHHHH-----HCTT--C--HHHHH--HHHHHHHHTTC----------HHHHHHHHHHHHHH--
T ss_pred HHHHHcCCH-HHHHHHHHHHHH-----hCCC--C--HHHHH--HHHHHHHHcCC----------HHHHHHHHHHHHHh--
Confidence 0010 001 111122222222 1232 1 12222 23444332211 35789999999865
Q ss_pred ccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024539 164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISEL 209 (266)
Q Consensus 164 ~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~l 209 (266)
.|.+|- ...|.+.. |..+++.++|++..+++++-.-..+
T Consensus 141 ---~P~~~~---a~~~L~~~-l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 ---KPDFPD---AYCNLAHC-LQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp ---CSCCHH---HHHHHHHH-HHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred ---CCCChH---HHhhhhhH-HHhcccHHHHHHHHHHHHHhChhHH
Confidence 355542 33444443 4457999999988888876655444
No 54
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=82.62 E-value=18 Score=29.23 Aligned_cols=58 Identities=14% Similarity=0.055 Sum_probs=35.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~ 67 (266)
+-+..++.+..+.|+|++++..+.+++..+|.. .+=...+..+|-. .+....+...+.
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQD-PEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 345667777778888888888888888776654 3444444544432 333444444443
No 55
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=82.46 E-value=15 Score=28.37 Aligned_cols=167 Identities=10% Similarity=-0.023 Sum_probs=86.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchh-hHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIK 86 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~l~ 86 (266)
.-+..++.+..+.|+|++++.++++++...|.. .+-...+..+|-. .+....+...+....+... .+.. ......
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~--~~~~~~~~l~~ 84 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSDPKN-ELAWLVRAEIYQY-LKVNDKAQESFRQALSIKP--DSAEINNNYGW 84 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCC--CChHHHHHHHH
Confidence 345677888999999999999999999877654 4444455555432 3445555555544322211 1111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccC
Q 024539 87 EYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADL 166 (266)
Q Consensus 87 ~yk~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L 166 (266)
-|... ..--.+.+..++..+- ....+. ....+...|..|... |+ .+.|...|+++++.
T Consensus 85 ~~~~~-----~~~~~~A~~~~~~~~~-~~~~~~-~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~----- 142 (225)
T 2vq2_A 85 FLCGR-----LNRPAESMAYFDKALA-DPTYPT-PYIANLNKGICSAKQ-----GQ-----FGLAEAYLKRSLAA----- 142 (225)
T ss_dssp HHHTT-----TCCHHHHHHHHHHHHT-STTCSC-HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----
T ss_pred HHHHh-----cCcHHHHHHHHHHHHc-CcCCcc-hHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-----
Confidence 11110 0011223333333332 111221 222333455555332 11 35688888888754
Q ss_pred CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 167 PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 167 ~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
.|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 143 ~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 143 QPQFP---PAFKELARTKM-LAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp STTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred CCCCc---hHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence 23443 23344444444 479999999988877653
No 56
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=81.82 E-value=20 Score=29.33 Aligned_cols=64 Identities=13% Similarity=0.032 Sum_probs=46.0
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 024539 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELT--VEERNLLSVGYKNVIGARRASWRILSSIEQ 71 (266)
Q Consensus 7 re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls--~eERnLLsvAyKn~i~~~R~s~R~l~~ieq 71 (266)
-+.+..+|...-+.|+|++++..+++++...|.-. .+=...+..+|-. .+....|...+..+..
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQ 80 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 46778899999999999999999999998876543 4444555555533 4566667776665443
No 57
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=81.78 E-value=29 Score=31.15 Aligned_cols=54 Identities=13% Similarity=0.090 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhc--cCCCCCcc---hHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 150 NSMKAYETATTAAEA--DLPPTHPI---RLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 150 ~A~~aY~~A~~~a~~--~L~pt~Pi---rLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
.+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 344455555555432 45566653 2455555555566678999999998888765
No 58
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=81.52 E-value=6 Score=33.57 Aligned_cols=73 Identities=12% Similarity=0.139 Sum_probs=49.5
Q ss_pred HHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHH
Q 024539 121 TVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQ 200 (266)
Q Consensus 121 kvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~ 200 (266)
.+..+...|..|...-+ -+.|...|++|+++++. .|....+...+..|.+..|+. +|+.++|+...++
T Consensus 154 ~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~k 221 (293)
T 2qfc_A 154 NLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHH
Confidence 34344455666644322 35799999999999863 443222233566777777665 7999999999999
Q ss_pred HHHHH
Q 024539 201 AFDEA 205 (266)
Q Consensus 201 afd~A 205 (266)
|++-+
T Consensus 222 al~~~ 226 (293)
T 2qfc_A 222 AIEIS 226 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98766
No 59
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=81.22 E-value=22 Score=29.52 Aligned_cols=168 Identities=14% Similarity=0.114 Sum_probs=87.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchh-hHHHHHHHH
Q 024539 11 VYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEV-NAKRIKEYR 89 (266)
Q Consensus 11 ~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~l~~yk 89 (266)
..+|.+....|+|++++.++++++..+|. +.+-...+..+|-. .+....+...+........ .+.. ......-|.
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~~~~ 199 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKS--DNTEAFYKISTLYY 199 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCS--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHH
Confidence 44588999999999999999999987664 34445555555543 3555666666654332211 1111 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhh--------cccccchhccccChhHHHHHHHHHHHHHHHHHH
Q 024539 90 QKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMK--------GDYYRYLAEFKFGDEKKEAAANSMKAYETATTA 161 (266)
Q Consensus 90 ~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~Kmk--------gDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~ 161 (266)
. . .--.+.+..+...+--...++....+|.++. |..+. ..+ -.+.|...|+++++.
T Consensus 200 ~-----~-~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~-----~~~~A~~~~~~~~~~ 263 (359)
T 3ieg_A 200 Q-----L-GDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESVMKT 263 (359)
T ss_dssp H-----H-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHH-----HTT-----CHHHHHHHHHHHHHH
T ss_pred H-----c-CCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHHHhc
Confidence 0 0 1111222333222211112233333332221 22221 111 135688888888754
Q ss_pred HhccCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 162 AEADLPPTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 162 a~~~L~pt~PirL-gLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
. |.+|... .+..+.+..++. .|+.++|+...++++..
T Consensus 264 ~-----~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 264 E-----PSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp C-----CSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred C-----CCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 3 4565443 344555655554 79999999998887663
No 60
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=81.17 E-value=9.4 Score=32.28 Aligned_cols=90 Identities=10% Similarity=0.001 Sum_probs=52.7
Q ss_pred HHHHHHHhhcCCCCCCChhH--HHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHH-Hhh
Q 024539 102 DIMTVIDEHLIPSASAGEST--VFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLG-LAL 178 (266)
Q Consensus 102 eii~lId~~Lip~~~~~esk--vfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLg-LaL 178 (266)
+++.+++..+-.....++.+ +.|++..|.+|... ++ .+.|...|++|+.+.. +..++.... +..
T Consensus 93 ~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~-----~~~Ai~~~~~al~~~~---~~~~~~~~~~~~~ 159 (293)
T 3u3w_A 93 EIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKK-----VD-----YEYCILELKKLLNQQL---TGIDVYQNLYIEN 159 (293)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTS-----SC-----HHHHHHHHHHHHHTCC---CCSCTTHHHHHHH
T ss_pred HHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcc-----cC-----HHHHHHHHHHHHHHhc---ccccHHHHHHHHH
Confidence 45555555443333333333 44555567765322 11 2568999999998542 223333333 345
Q ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024539 179 NFSVFYYEIMNSPERACHLAKQAFDEA 205 (266)
Q Consensus 179 N~SVF~yEi~~~~~~Ai~iAk~afd~A 205 (266)
|.+++|+. +|+.++|+..-++|++.+
T Consensus 160 ~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 160 AIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 55555554 799999999999988644
No 61
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=80.62 E-value=2.3 Score=32.58 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHhccC---CCC-------CcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADL---PPT-------HPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L---~pt-------~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+..... .|. +|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 578999999999864321 233 67777888888888776 6999999998888754
No 62
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=80.49 E-value=15 Score=29.72 Aligned_cols=59 Identities=10% Similarity=0.091 Sum_probs=32.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
+.++.+|.+.-+.|+|++++.+++++++.+|.-. +-...+..+|-. .+....|...+..
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~-~~~~~l~~~~~~-~~~~~~A~~~~~~ 62 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSP-YIYNRRAVCYYE-LAKYDLAQKDIET 62 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCS-TTHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH-HHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 3556677777777777777777777776655422 223334443322 3334444444443
No 63
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=80.41 E-value=23 Score=30.19 Aligned_cols=51 Identities=6% Similarity=-0.024 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~af 202 (266)
+.|...|++|+.+... .+. +| ..+.++.-....|-.+|+.++|+...++++
T Consensus 172 ~~A~~~~~~al~~~~~-~~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 172 DEAAASLQKEKSMYKE-MEN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHH-TTC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH-cCC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 5789999999999864 222 22 333233333444555799999988776654
No 64
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=80.31 E-value=23 Score=29.12 Aligned_cols=44 Identities=18% Similarity=0.039 Sum_probs=25.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAy 52 (266)
+.++.+|....+.|+|++++.++++++...|. +..-...+..+|
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~ 65 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQ 65 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 34556666666667777777777666665554 233333344433
No 65
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=80.30 E-value=23 Score=29.15 Aligned_cols=55 Identities=15% Similarity=-0.051 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCC-cchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTH-PIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~-PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
+.|...|++|+.+....-.+.+ |-......+.+..++ ..|+.++|+...++++..
T Consensus 210 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 210 KTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 5789999999998854333222 333344556666555 479999999988887654
No 66
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=78.65 E-value=29 Score=29.30 Aligned_cols=52 Identities=10% Similarity=-0.073 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 148 AANSMKAYETATTAAEADLPPTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L~pt~PirL-gLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
.+.|..+|++|+++... .. +|... ....|.+.++.. +|+.++|+...+++.+
T Consensus 134 ~~~A~~~~~~Al~~~~~-~~--~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQ-DQ--SVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-CC--ChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 36799999999998753 11 23232 345566776665 6999999987766654
No 67
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=78.34 E-value=6.4 Score=29.35 Aligned_cols=46 Identities=17% Similarity=0.185 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|.+.|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5789999999854 34454 455666666665 6999999988777754
No 68
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=77.62 E-value=14 Score=25.78 Aligned_cols=53 Identities=9% Similarity=0.056 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+.. ..++.+|.......+.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 578999999998875 3455555545566777776665 7999999887766655
No 69
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=77.54 E-value=12 Score=29.28 Aligned_cols=86 Identities=21% Similarity=0.091 Sum_probs=54.6
Q ss_pred CCHHHHHHHHHHHH---hcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhhcchhhHHHHHHHHHHHH
Q 024539 21 ERYDEMVDAMKNVA---KLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEVNAKRIKEYRQKVE 93 (266)
Q Consensus 21 eRy~Dmi~~mk~~i---~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~l~~yk~ki~ 93 (266)
.|.|..++.+|.-+ -++++||.|-|.=|.--.|...-.-|-|+|-+..-.. +....+ .+-++-..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr~e 85 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQAL 85 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHhHH
Confidence 56677788887655 3589999999999999888888888888887743110 110001 11133444556
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 024539 94 SELSDICNDIMTVIDEHL 111 (266)
Q Consensus 94 ~EL~~~C~eii~lId~~L 111 (266)
++|..+.+..+.-||..|
T Consensus 86 ~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 86 WEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666666666666666554
No 70
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=77.44 E-value=11 Score=27.08 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIS 207 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~ 207 (266)
+.|...|++|+.++.. .+ .+|.......|.+..++. .|+.++|+...+++++-+..
T Consensus 66 ~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQ-LK-DRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC-CcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHH
Confidence 5789999999999864 32 233344455566655554 79999999999998876543
No 71
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=77.04 E-value=28 Score=28.31 Aligned_cols=181 Identities=13% Similarity=0.089 Sum_probs=90.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcC-------CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hh--hcc
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLD-------VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE-EA--KGN 78 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~-------~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~-~~--~~~ 78 (266)
-+..++.+....|+|++++.++++++... .+....-...+..+|- ..+....|...+....+.. .. ...
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 35578888889999999999999988642 1222222333333332 2344445555554322211 00 001
Q ss_pred hhhH----HHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHH
Q 024539 79 EVNA----KRIKEY-RQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMK 153 (266)
Q Consensus 79 ~~~~----~~l~~y-k~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~ 153 (266)
+... ....-| ...=-++-.......+.+.....-+ +....+..+...|..|...-. .+.|..
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~---~~~~~~~~~~~la~~~~~~g~----------~~~A~~ 216 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGP---DDPNVAKTKNNLASCYLKQGK----------FKQAET 216 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCT---TCHHHHHHHHHHHHHHHHHTC----------HHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHcCC----------HHHHHH
Confidence 1100 000000 0000123334445555554433222 122333333445555533321 356888
Q ss_pred HHHHHHHHHhc-----------------------------------------cCCCCCcchHHHhhhHHHHHHHHhCChH
Q 024539 154 AYETATTAAEA-----------------------------------------DLPPTHPIRLGLALNFSVFYYEIMNSPE 192 (266)
Q Consensus 154 aY~~A~~~a~~-----------------------------------------~L~pt~PirLgLaLN~SVF~yEi~~~~~ 192 (266)
.|++|++++.. .....+|.......+.+..|.. .|+.+
T Consensus 217 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~ 295 (311)
T 3nf1_A 217 LYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFE 295 (311)
T ss_dssp HHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHH
Confidence 88888877532 1122456666666666666655 69999
Q ss_pred HHHHHHHHHHHH
Q 024539 193 RACHLAKQAFDE 204 (266)
Q Consensus 193 ~Ai~iAk~afd~ 204 (266)
+|+...++|++-
T Consensus 296 ~A~~~~~~al~l 307 (311)
T 3nf1_A 296 AAETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988887754
No 72
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=76.88 E-value=25 Score=27.60 Aligned_cols=59 Identities=5% Similarity=-0.071 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSI 69 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~i 69 (266)
.+..+|...-+.|+|++++.++++++..+|.- .+-...+..+|- ..+....+.+.+...
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~-~~~~~~la~~~~-~~~~~~~A~~~~~~~ 83 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAIEENKED-AIPYINFANLLS-SVNELERALAFYDKA 83 (243)
T ss_dssp -----------------CCTTHHHHHTTCTTC-HHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 45667888888999999999999999866653 444444555443 244555666665543
No 73
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=76.75 E-value=26 Score=27.66 Aligned_cols=57 Identities=12% Similarity=0.087 Sum_probs=36.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~ 67 (266)
+.+..++.+.-+.|+|++++.++.+++..+ -+..=...+..+|-. .+....+...+.
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 62 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYE-KGEYETAISTLN 62 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH-cccHHHHHHHHH
Confidence 456778888888999999999999988776 334444455555433 233344444443
No 74
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=74.72 E-value=8.7 Score=28.49 Aligned_cols=52 Identities=10% Similarity=0.042 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~af 202 (266)
+.|...|++|+++.. ..++.++.+-....|.+..+ .-+|+.++|++.-++|+
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 578999999999975 35554554333445555554 45799999998665554
No 75
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=73.60 E-value=33 Score=27.48 Aligned_cols=45 Identities=13% Similarity=0.145 Sum_probs=33.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYK 53 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyK 53 (266)
+-+..++.+..+.|+|++++..+++++..+|.. .+=...+..+|.
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~~ 84 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVARTPRY-LGGYMVLSEAYV 84 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHH
Confidence 345678899999999999999999999988774 333444444443
No 76
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=73.54 E-value=7.1 Score=34.84 Aligned_cols=54 Identities=11% Similarity=0.085 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhc-cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEA-DLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~-~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|.++|++|+++.+. .....||-.+...-|.+.-|+. +|+.++|+..-+++..
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 5799999999999864 3345677777777788877776 7999999877666543
No 77
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=73.51 E-value=31 Score=27.13 Aligned_cols=32 Identities=3% Similarity=0.088 Sum_probs=27.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~ 39 (266)
.-+..++.+..+.|+|++++.++++++...+.
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 34567888999999999999999999987665
No 78
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=72.24 E-value=12 Score=25.64 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~af 202 (266)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5788999999865 34454 345566666665 799999988776665
No 79
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=72.04 E-value=30 Score=26.24 Aligned_cols=46 Identities=11% Similarity=0.051 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 4678888888765 34444 445566666655 6999998887766654
No 80
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=70.89 E-value=14 Score=28.40 Aligned_cols=75 Identities=9% Similarity=-0.034 Sum_probs=48.9
Q ss_pred hHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHH
Q 024539 120 STVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAK 199 (266)
Q Consensus 120 skvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk 199 (266)
..+..+-..|..|...-+ .+.|...|++|+.+++ ..+. +|...+.+++.-...|-.+|++++|+...+
T Consensus 64 ~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 131 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLPE-DPLAASANAYEVATVALHFGDLAGARQEYE 131 (203)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSCC-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcCc-cHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 344444556666654432 2578999999999996 3442 454445444444444445899999999999
Q ss_pred HHHHHHH
Q 024539 200 QAFDEAI 206 (266)
Q Consensus 200 ~afd~Ai 206 (266)
+++.-+-
T Consensus 132 ~al~~~~ 138 (203)
T 3gw4_A 132 KSLVYAQ 138 (203)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887643
No 81
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=70.55 E-value=17 Score=23.95 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 5688899998865 34443 344566665554 7999999988777665
No 82
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=69.64 E-value=15 Score=26.26 Aligned_cols=47 Identities=15% Similarity=0.281 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
+.|...|++|+++ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5788899988755 3445 3456667776665 79999999988887754
No 83
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=69.57 E-value=26 Score=24.49 Aligned_cols=58 Identities=7% Similarity=0.017 Sum_probs=41.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~ 67 (266)
.-...++.+..+.|+|++++.+++++++.+|.... =...+..+|.. .+..-.|...+.
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDYVG-TYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH-HHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHH-cCCHHHHHHHHH
Confidence 44668899999999999999999999998887544 45556666543 344444444443
No 84
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=67.63 E-value=24 Score=24.90 Aligned_cols=49 Identities=16% Similarity=0.138 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++++.. .|.+|......++.+..++. +|+.++|+...++++.
T Consensus 56 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888753 46776655666666666664 7999999987766554
No 85
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=67.61 E-value=20 Score=24.17 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+ .|.++ ....+.+..++. .|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEES---KYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 5688889888765 23333 345666766665 6999999887776654
No 86
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=67.35 E-value=31 Score=24.54 Aligned_cols=48 Identities=8% Similarity=0.014 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~A 205 (266)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 4577788887754 34443 334455555444 688888888777776654
No 87
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=67.11 E-value=30 Score=24.30 Aligned_cols=59 Identities=14% Similarity=0.149 Sum_probs=42.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
.-+..++.+..+.|+|++++.++++++..+|.. .+=...+..+|.. .+....+...+..
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-SVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 345678899999999999999999999887764 3445556666654 3555555555543
No 88
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=66.67 E-value=20 Score=29.02 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHH-----HhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 148 AANSMKAYETATTAAEADLPPTHPIRLG-----LALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L~pt~PirLg-----LaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
-+.|..+|++|+++.-. .|+..++.+. ...|-+.-+.. +|+.++|+.-+.+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 36799999999998743 3333344333 66676666555 7999999998877765
No 89
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.52 E-value=15 Score=26.51 Aligned_cols=50 Identities=20% Similarity=0.186 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
+.|...|++|+. +.|.+|....+..+.+..++. +|+.++|+...++++..
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhh
Confidence 456777777753 445555556666666666555 68888888877776543
No 90
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=65.59 E-value=24 Score=23.92 Aligned_cols=47 Identities=15% Similarity=0.143 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 4678888887754 3445421 45666666665 6999999887776654
No 91
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=65.47 E-value=41 Score=25.27 Aligned_cols=31 Identities=10% Similarity=0.156 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~ 39 (266)
.+..++.+..+.|+|++++.++.+++..+|.
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~ 43 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALSIAPA 43 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc
Confidence 4455666666667777777777666655443
No 92
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=65.20 E-value=46 Score=25.83 Aligned_cols=31 Identities=6% Similarity=0.004 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~ 39 (266)
.+..++....+.|+|++++.++++++...|.
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~ 70 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKEALDFFIH 70 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 4567788888899999999999999876443
No 93
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=63.81 E-value=53 Score=26.00 Aligned_cols=61 Identities=7% Similarity=-0.076 Sum_probs=42.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIE 70 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ie 70 (266)
.-+..+|.+..+.|+|++++.++++++..+|.- ..-...+..+|-. .+....+.+.+....
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSRN-ARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-HHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 345678889999999999999999999877653 4444455555533 455566666665543
No 94
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=63.06 E-value=61 Score=26.45 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=27.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~L 40 (266)
.-+..++.+..+.|+|++++.+++++++.+|..
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 88 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 88 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCC
Confidence 345678888999999999999999999876653
No 95
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=62.61 E-value=20 Score=30.75 Aligned_cols=73 Identities=15% Similarity=0.087 Sum_probs=45.2
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024539 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (266)
Q Consensus 38 ~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l~~yk~ki~~EL~~~C~eii~lId~~L 111 (266)
|+||.|-|.=|....|...-.-|.+.|.+..--...- +.-.....+-++-.++.+++|..+.+..+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~l-Kk~~K~~~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDL-KKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999988888888888753111100 000000011133445666677777777777776654
No 96
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=61.92 E-value=25 Score=25.95 Aligned_cols=46 Identities=9% Similarity=0.026 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 64 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 64 QRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5788999999865 44454 344555665554 7999999876666543
No 97
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=61.68 E-value=26 Score=26.57 Aligned_cols=47 Identities=9% Similarity=-0.031 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
+.|..+|++|+.+ .|.+|. ..+|.++.|+. +|+.++|+...++++.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5789999999865 456653 34666666665 79999998766665543
No 98
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=61.60 E-value=48 Score=24.82 Aligned_cols=59 Identities=5% Similarity=0.007 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSI 69 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~i 69 (266)
-+..++.+..+.|+|++++.++++++..+|.. ..=...+..+|.. .+....+...+...
T Consensus 47 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~~a 105 (164)
T 3sz7_A 47 YLSNRAAAYSASGQHEKAAEDAELATVVDPKY-SKAWSRLGLARFD-MADYKGAKEAYEKG 105 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-ccCHHHHHHHHHHH
Confidence 45678888999999999999999999988764 4455556666644 35566666666543
No 99
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=60.78 E-value=47 Score=24.35 Aligned_cols=58 Identities=21% Similarity=0.185 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
-+..++.+..+.|+|++++..+++++...|.- ..-...+..+|- ..+....+...+..
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~A~~~~~~ 67 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYDADAFD-VDVALHLGIAYV-KTGAVDRGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC-HHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC-hHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 34467888888999999999999988765543 333334444432 23444455555543
No 100
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=60.67 E-value=80 Score=27.03 Aligned_cols=32 Identities=6% Similarity=0.310 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~L 40 (266)
-+..++.+..+.|+|++++.++++++..+|+.
T Consensus 69 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 100 (388)
T 1w3b_A 69 AYSNLGNVYKERGQLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHcCcch
Confidence 35566677777777777777777777666554
No 101
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=60.46 E-value=63 Score=25.73 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 150 NSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 150 ~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
.|...|++++..... ..|......++.+..++. +|+.++|+...++++.
T Consensus 195 ~a~~~~~~~~~~~~~----~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 195 TLMERLKADATDNTS----LAEHLSETNFYLGKYYLS-LGDLDSATALFKLAVA 243 (275)
T ss_dssp HHHHHHHHHCCSHHH----HHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccccc----ccccccHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 455555555433221 122223445555555554 6999999987777653
No 102
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=60.23 E-value=11 Score=27.08 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=23.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~ 39 (266)
-+++++.++.+.|+|++++.+..++.+.+|+
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 4567777777778888888877777776666
No 103
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=59.91 E-value=31 Score=24.06 Aligned_cols=46 Identities=17% Similarity=0.106 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++.
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALE-AMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Confidence 5688888888865 33343 34556665555 47999999888777664
No 104
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=59.82 E-value=41 Score=23.37 Aligned_cols=72 Identities=14% Similarity=0.111 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLR 228 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLr 228 (266)
+.|...|++|+++ .|.+|. ...+.+..|+ .+|+.++|+...++|+.-+-.. ....-...+.++|+
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHHH
Confidence 5788889988865 344443 4455555554 4799999999888887765432 11233445556666
Q ss_pred hhHhhhc
Q 024539 229 DNLTLWT 235 (266)
Q Consensus 229 DNl~~W~ 235 (266)
..=..|.
T Consensus 89 ~~~~~~~ 95 (100)
T 3ma5_A 89 KAEGLEH 95 (100)
T ss_dssp HHHTTC-
T ss_pred Hcccccc
Confidence 5544443
No 105
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=59.47 E-value=50 Score=24.26 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~A 205 (266)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++...
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5789999999865 456663 34566665554 799999998877776544
No 106
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=58.83 E-value=46 Score=23.68 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
..|..-|++|+......- ...+.+-.+..++++-+| .+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~-~~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGE-ISTIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccC-CCcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 467888899987764221 112334445555655555 57999999998888764
No 107
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=58.10 E-value=21 Score=20.86 Aligned_cols=26 Identities=27% Similarity=0.611 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024539 83 KRIKEYRQKVESELSDICNDIMTVID 108 (266)
Q Consensus 83 ~~l~~yk~ki~~EL~~~C~eii~lId 108 (266)
+.++.||.+|.+.|..+.+.|-.++-
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 46788999999999999998877653
No 108
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=57.81 E-value=29 Score=26.32 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|..+|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5789999999865 35554 333444444443 6888888887777643
No 109
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=57.77 E-value=1.1e+02 Score=27.57 Aligned_cols=58 Identities=10% Similarity=0.177 Sum_probs=39.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhh-hHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGA-RRASWRILS 67 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~-~R~s~R~l~ 67 (266)
+-+.+++.+..+.|+|++++....+++..+|.. .+=.+.+..+|... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~-~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELNAAN-YTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhCccC-HHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 456678888888999999999999999988874 33344444444433 32 445555554
No 110
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=57.59 E-value=67 Score=25.54 Aligned_cols=47 Identities=15% Similarity=0.082 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 35677788887764 34443 233444444444 7999999888887765
No 111
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=57.14 E-value=29 Score=29.00 Aligned_cols=73 Identities=15% Similarity=0.214 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024539 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (266)
Q Consensus 38 ~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l~~yk~ki~~EL~~~C~eii~lId~~L 111 (266)
|+||.|-|.=|....|...-..|.+.|.+..--...- +........-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKI-KEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888743111000 000000011234445566677777666666666544
No 112
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=57.00 E-value=49 Score=23.38 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=43.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
.-+..++.+..+.|+|++++.+++++++.+|.- .+=...+..+|-. .+....+...+..
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 86 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-QALRVFYAMVLYN-LGRYEQGVELLLK 86 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 445678889999999999999999999988775 4555556666544 4555666666654
No 113
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=56.84 E-value=43 Score=23.42 Aligned_cols=49 Identities=10% Similarity=-0.064 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai 206 (266)
+.|...|++|+.+ .|.++ ....+.+..+.. +|+.++|+...++++...-
T Consensus 36 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 36 DAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcc
Confidence 5688899998865 34443 234555655554 7999999998888776543
No 114
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=56.58 E-value=28 Score=26.32 Aligned_cols=31 Identities=23% Similarity=0.164 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024539 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (266)
Q Consensus 10 l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~L 40 (266)
...+|++..+.|+|++++.+++++++.+|.-
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~p~~ 64 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQERD 64 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999999999999988764
No 115
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=56.39 E-value=91 Score=26.31 Aligned_cols=54 Identities=11% Similarity=0.016 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcch-HHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024539 148 AANSMKAYETATTAAEADLPPTHPIR-LGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L~pt~Pir-LgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~A 205 (266)
.+.|...|++|+++... . .+|.. .....|.+.+|.. +|+.++|+...++|+.-.
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 36799999999999864 2 13333 3455566766665 799999999888876643
No 116
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=55.63 E-value=58 Score=23.86 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=19.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~ 39 (266)
+.+..+|....+.|+|++++.++++++..+|.
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~ 50 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHY 50 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc
Confidence 33445566666666666666666666665543
No 117
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=55.35 E-value=31 Score=28.87 Aligned_cols=73 Identities=14% Similarity=0.136 Sum_probs=44.3
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024539 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (266)
Q Consensus 38 ~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l~~yk~ki~~EL~~~C~eii~lId~~L 111 (266)
|+||.|-|.=|....|...-..|.+.|.+..--...- +.......+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKV-KALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888743111000 000000001234445566666666666666666544
No 118
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=54.51 E-value=32 Score=28.72 Aligned_cols=73 Identities=19% Similarity=0.151 Sum_probs=44.3
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024539 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (266)
Q Consensus 38 ~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l~~yk~ki~~EL~~~C~eii~lId~~L 111 (266)
|+||.|-|.=|....|...-..|.+.|.+..--...- +........-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDL-KALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999988888888888743111000 000000011234445566666666666666666544
No 119
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=54.29 E-value=37 Score=22.83 Aligned_cols=45 Identities=9% Similarity=-0.052 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~af 202 (266)
+.|...|++|+.+ .|.+| ....+.+..++ .+|+.++|+...++++
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHH
Confidence 5678888888765 34443 34556665554 4799999988766654
No 120
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=54.09 E-value=35 Score=28.79 Aligned_cols=54 Identities=7% Similarity=-0.065 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEA 205 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~A 205 (266)
+.|..+|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-.
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~ 107 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIF 107 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 5799999999999853 33 555555566555556667899999999888886543
No 121
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=53.79 E-value=46 Score=22.77 Aligned_cols=46 Identities=15% Similarity=0.144 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 29 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-----NPANA---VYFCNRAAAYSK-LGNYAGAVQDCERAIC 74 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCCH---HHHHHHHHHHHH-hhchHHHHHHHHHHHh
Confidence 3455666666543 12222 223334443333 5666666666665554
No 122
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=53.74 E-value=83 Score=25.06 Aligned_cols=62 Identities=6% Similarity=-0.011 Sum_probs=42.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHhhhhhhhHHHHHHHHHHh
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE--LTVEERNLLSVGYKNVIGARRASWRILSSIE 70 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~--Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ie 70 (266)
+.+..+|...-+.|+|++++..+++++...|. ...+-...+..+|-. .+....|...+..+.
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 35667888899999999999999999987654 334445555555532 455566666665544
No 123
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=53.46 E-value=35 Score=28.56 Aligned_cols=69 Identities=22% Similarity=0.198 Sum_probs=43.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024539 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (266)
Q Consensus 38 ~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~l~~yk~ki~~EL~~~C~eii~lId~~L 111 (266)
|+||.|-|.=|....|...-..|.+.|.+..--. +.+..+ ..-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999988888888888743111 110000 01134444566666666666666666544
No 124
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=53.38 E-value=47 Score=22.71 Aligned_cols=47 Identities=17% Similarity=0.126 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5688888888764 34443 33455555554 479999999887776643
No 125
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=53.20 E-value=48 Score=22.21 Aligned_cols=47 Identities=19% Similarity=0.199 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5678888888754 34443 344555555554 79999999988887654
No 126
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=52.48 E-value=49 Score=31.63 Aligned_cols=47 Identities=21% Similarity=0.316 Sum_probs=31.0
Q ss_pred hcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhH------HHHHHH
Q 024539 128 KGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNF------SVFYYE 186 (266)
Q Consensus 128 kgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~------SVF~yE 186 (266)
-||..||...+ ..|...|.+|..+.=.+=. .-..||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G~--~~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPSNGQ--PYNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTTBSH--HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCCCCc--hHHHHHHHHhcccccHHHHHHHH
Confidence 79999999764 5799999999866411111 11456665554 577663
No 127
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=52.38 E-value=1.1e+02 Score=26.10 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=32.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAy 52 (266)
.-+..++.+..+.++++++..+.+.++..+|.. .+-...+..+|
T Consensus 34 ~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~-~~~~~~lg~~~ 77 (388)
T 1w3b_A 34 GVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLL-AEAYSNLGNVY 77 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-hHHHHHHHHHH
Confidence 345677888889999999999999988876653 44455555554
No 128
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=52.34 E-value=1.3e+02 Score=26.96 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh
Q 024539 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKN 54 (266)
Q Consensus 10 l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn 54 (266)
...++.+..+.|+|++++.++.+++..+|. +..=.+-+..+|..
T Consensus 203 ~~~lg~~~~~~g~~~eAl~~~~~al~l~P~-~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 203 WQHRQWVIQEFKLWDNELQYVDQLLKEDVR-NNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH
Confidence 345666666667777777777777766655 23334444444444
No 129
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=52.26 E-value=13 Score=33.52 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHhcc--------CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEAD--------LPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~--------L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +++.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 56888888888865431 011467777888888888775 7999999988888754
No 130
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=52.09 E-value=45 Score=24.30 Aligned_cols=47 Identities=4% Similarity=-0.178 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 5688888888865 24443 344555555554 79999999888777643
No 131
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=51.94 E-value=31 Score=28.87 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=45.2
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024539 38 VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (266)
Q Consensus 38 ~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l~~yk~ki~~EL~~~C~eii~lId~~L 111 (266)
|+||.|-|.=|....|...-..|.++|.+..--... .+.......+-++-.++.++++..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~-lKk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDK-LKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998888888888874311110 0000000011234445666677777777777666554
No 132
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.41 E-value=48 Score=23.56 Aligned_cols=46 Identities=7% Similarity=-0.076 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888765 34443 344556665554 7999999887776654
No 133
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=51.35 E-value=44 Score=25.13 Aligned_cols=46 Identities=11% Similarity=0.135 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+++ .|.||. ...+.+..|+ -+|+.++|+..-++|++
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5788889888865 455542 3344444444 47999999887766654
No 134
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=50.98 E-value=52 Score=21.88 Aligned_cols=29 Identities=28% Similarity=0.360 Sum_probs=16.4
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024539 11 VYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (266)
Q Consensus 11 ~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~ 39 (266)
..++.+..+.|+|++++.+++++++..|.
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 38 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDPE 38 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCcC
Confidence 34555555556666666666666555443
No 135
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=49.93 E-value=64 Score=26.90 Aligned_cols=71 Identities=13% Similarity=0.099 Sum_probs=46.7
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 024539 37 DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHL 111 (266)
Q Consensus 37 ~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l~~yk~ki~~EL~~~C~eii~lId~~L 111 (266)
-|+||.|-|.=|....|...-..|.+.|.+..--...-.+.. +.-++-.++.++++..+.+..+.-||..+
T Consensus 104 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~----kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 104 LPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE----GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST----TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999999999988888888888431111100100 02244555667777777777777776654
No 136
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=49.71 E-value=39 Score=26.15 Aligned_cols=46 Identities=9% Similarity=0.062 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|..+|++|+.+ .|.+|. ...|.++.|.. +|+.++|+..-++|+.
T Consensus 87 ~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 87 QQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5799999999855 456663 34566666554 7999999886666554
No 137
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=49.56 E-value=87 Score=24.07 Aligned_cols=46 Identities=15% Similarity=0.016 Sum_probs=30.7
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Q 024539 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYK 53 (266)
Q Consensus 7 re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyK 53 (266)
-+-+..++.+..+.|+|++++.++++++..+|. +.+=...|..+|-
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~ 81 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQ 81 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHH
Confidence 345667777777888888888888888877664 3444445555543
No 138
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=49.46 E-value=58 Score=21.99 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4567777777654 23332 233444444443 5888888777766654
No 139
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=46.72 E-value=36 Score=27.49 Aligned_cols=78 Identities=8% Similarity=0.011 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHh--ccCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHH
Q 024539 149 ANSMKAYETATTAAE--ADLPPTHPIRL-GLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQ 225 (266)
Q Consensus 149 e~A~~aY~~A~~~a~--~~L~pt~PirL-gLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~ld~l~ee~y~ds~~Ilq 225 (266)
+.|..+|.+|+++-. -.+.|.++--+ .-..|-++-+. -+|+.++|+.--++|+.-.= -+-..+++...+.+
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-~lgr~eEAl~~y~kAlel~p-----~d~~~~~~~~~~~~ 147 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-GLGRGAEAMPEFKKVVEMIE-----ERKGETPGKERMME 147 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH-----HCCSCCTTHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-HCCCHHHHHHHHHHHHhcCC-----CcHHHHHHHHHHHH
Confidence 468888999988732 24566554211 00123333333 48999999876555544321 13334566666666
Q ss_pred HHHhhHh
Q 024539 226 LLRDNLT 232 (266)
Q Consensus 226 LLrDNl~ 232 (266)
.+.+.+.
T Consensus 148 ~~~~~~~ 154 (159)
T 2hr2_A 148 VAIDRIA 154 (159)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655543
No 140
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=46.64 E-value=64 Score=21.73 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++++.+ .|.+| ....+.+..++. .|+.++|+...+++++
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4678888888754 33443 334566666654 6999999887777654
No 141
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=46.58 E-value=31 Score=31.72 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHhccCCC--------CCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPP--------THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~p--------t~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +++.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 5788889998877532 110 234667788888888776 6899999888877643
No 142
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=46.17 E-value=59 Score=22.22 Aligned_cols=41 Identities=7% Similarity=0.073 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVG 51 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvA 51 (266)
-+..++.+..+.|+|++++.++++++...+ +++-+..+..+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~l~~~ 121 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHR--TPDVLKKCQQA 121 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCC--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCC--CHHHHHHHHHH
Confidence 355778888899999999999999988765 34444444443
No 143
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=46.10 E-value=56 Score=25.19 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5788999999865 23443 445666666665 7999999998888876
No 144
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=45.76 E-value=18 Score=31.74 Aligned_cols=28 Identities=21% Similarity=0.266 Sum_probs=14.1
Q ss_pred hHHHhhhHHHHHHHHhCChHHHHHHHHHH
Q 024539 173 RLGLALNFSVFYYEIMNSPERACHLAKQA 201 (266)
Q Consensus 173 rLgLaLN~SVF~yEi~~~~~~Ai~iAk~a 201 (266)
+..+.+|.+..|+. +|+.++|+...++|
T Consensus 195 ~~~~~~nla~~~~~-~g~~~~A~~~~~~a 222 (336)
T 1p5q_A 195 RLASHLNLAMCHLK-LQAFSAAIESCNKA 222 (336)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 34445555554443 45555555555444
No 145
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=45.42 E-value=56 Score=25.90 Aligned_cols=33 Identities=12% Similarity=0.227 Sum_probs=27.7
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024539 7 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (266)
Q Consensus 7 re~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~ 39 (266)
-+.++..+...-+.|+|++++.++.+++..+|+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~ 36 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID 36 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC
Confidence 356788888899999999999999999876553
No 146
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=43.59 E-value=1.9e+02 Score=26.29 Aligned_cols=161 Identities=14% Similarity=0.028 Sum_probs=76.4
Q ss_pred HhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhh-HHHHHHHHHHhhhhhhhcchh-hHHHHHHHHHHHHHHH
Q 024539 19 QAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGAR-RASWRILSSIEQKEEAKGNEV-NAKRIKEYRQKVESEL 96 (266)
Q Consensus 19 q~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~-R~s~R~l~~ieqk~~~~~~~~-~~~~l~~yk~ki~~EL 96 (266)
..+++++++..+.++... ++-..+-...+..+|-. .+.. ..|...+....+... .+.. ....-.-|...
T Consensus 80 ~~~~~~~al~~l~~~~~~-~~~~a~~~~~lg~~~~~-~g~~~~~A~~~~~~al~~~p--~~~~a~~~lg~~~~~~----- 150 (474)
T 4abn_A 80 VQEEMEKTLQQMEEVLGS-AQVEAQALMLKGKALNV-TPDYSPEAEVLLSKAVKLEP--ELVEAWNQLGEVYWKK----- 150 (474)
T ss_dssp HHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHTS-SSSCCHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHhcc-CchhHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHc-----
Confidence 345577777777776543 33555666666666544 4445 556666544322211 1111 11111111110
Q ss_pred HHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHH
Q 024539 97 SDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGL 176 (266)
Q Consensus 97 ~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgL 176 (266)
.--.+.+...+..|-- ++.. ..+...|..|+.+..- ...++..-.+.|...|++|+++ .|.+|. .
T Consensus 151 -g~~~~A~~~~~~al~~---~p~~--~~~~~lg~~~~~~~~~-~~~~~~g~~~~A~~~~~~al~~-----~p~~~~---~ 215 (474)
T 4abn_A 151 -GDVTSAHTCFSGALTH---CKNK--VSLQNLSMVLRQLQTD-SGDEHSRHVMDSVRQAKLAVQM-----DVLDGR---S 215 (474)
T ss_dssp -TCHHHHHHHHHHHHTT---CCCH--HHHHHHHHHHTTCCCS-CHHHHHHHHHHHHHHHHHHHHH-----CTTCHH---H
T ss_pred -CCHHHHHHHHHHHHhh---CCCH--HHHHHHHHHHHHhccC-ChhhhhhhHHHHHHHHHHHHHh-----CCCCHH---H
Confidence 1112333444433321 1222 4445567777665221 1122333456889999999865 355542 2
Q ss_pred hhhHHHHHHHH---h----CChHHHHHHHHHHHH
Q 024539 177 ALNFSVFYYEI---M----NSPERACHLAKQAFD 203 (266)
Q Consensus 177 aLN~SVF~yEi---~----~~~~~Ai~iAk~afd 203 (266)
..|.+..|... . |+.++|+...++|+.
T Consensus 216 ~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 216 WYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 33444443331 1 567777766666554
No 147
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=42.77 E-value=49 Score=30.67 Aligned_cols=15 Identities=7% Similarity=-0.086 Sum_probs=7.7
Q ss_pred hCChHHHHHHHHHHH
Q 024539 188 MNSPERACHLAKQAF 202 (266)
Q Consensus 188 ~~~~~~Ai~iAk~af 202 (266)
+|+.++|+...++|+
T Consensus 87 ~g~~~eA~~~~~~al 101 (477)
T 1wao_1 87 LGKFRAALRDYETVV 101 (477)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 455555555444443
No 148
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=42.23 E-value=1.5e+02 Score=24.76 Aligned_cols=30 Identities=10% Similarity=0.232 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024539 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (266)
Q Consensus 10 l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~ 39 (266)
.+.++.+..+.|+++++.....+++...|.
T Consensus 102 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 131 (308)
T 2ond_A 102 YFAYADYEESRMKYEKVHSIYNRLLAIEDI 131 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSSSS
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcccc
Confidence 346677777788888888888888876553
No 149
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=42.11 E-value=94 Score=22.34 Aligned_cols=58 Identities=16% Similarity=0.014 Sum_probs=41.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~ 67 (266)
.....++...-+.|+|++++..+++++..+|. +.+=...+..+|-. .+....|...+.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~-~g~~~~A~~~~~ 75 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAE-NEKDGLAIIALN 75 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 45677888888999999999999999988776 35555666666543 344455555554
No 150
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=42.02 E-value=31 Score=31.77 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024539 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISEL 209 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~l 209 (266)
.+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
No 151
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=41.79 E-value=3.5e+02 Score=29.86 Aligned_cols=22 Identities=18% Similarity=0.107 Sum_probs=19.5
Q ss_pred HHHHHHHHhCChHHHHHHHHHH
Q 024539 180 FSVFYYEIMNSPERACHLAKQA 201 (266)
Q Consensus 180 ~SVF~yEi~~~~~~Ai~iAk~a 201 (266)
-.+-+|+-.|..++||.+..+|
T Consensus 1285 eli~yYe~~G~feEAI~LlE~a 1306 (1630)
T 1xi4_A 1285 ELINYYQDRGYFEELITMLEAA 1306 (1630)
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 5566789999999999999988
No 152
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=41.55 E-value=81 Score=22.95 Aligned_cols=47 Identities=13% Similarity=0.044 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDE 204 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~ 204 (266)
+.|...|++++.. .|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALD-NLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHH-HcCcHHHHHHHHHHHHhc
Confidence 4677888888755 23343 33455555554 479999999988887654
No 153
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=40.29 E-value=80 Score=21.16 Aligned_cols=33 Identities=12% Similarity=0.020 Sum_probs=28.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~L 40 (266)
+.+..++.+....|+|++++....+++..+|.-
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 37 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN 37 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 456778888889999999999999999887653
No 154
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=40.25 E-value=52 Score=26.53 Aligned_cols=95 Identities=16% Similarity=0.170 Sum_probs=56.2
Q ss_pred hcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCc---chHHHhhhHHHHH----HHHhCChHHHHHHHHH
Q 024539 128 KGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHP---IRLGLALNFSVFY----YEIMNSPERACHLAKQ 200 (266)
Q Consensus 128 kgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~P---irLgLaLN~SVF~----yEi~~~~~~Ai~iAk~ 200 (266)
.|..+.-+..+..+.+.....+.|..+|++|+++ .|.++ ..||.++.---++ -+-.++.++|+.
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~---- 112 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ---- 112 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----
Confidence 4556655666667776677789999999999865 45555 3455554322221 111245666665
Q ss_pred HHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhcc
Q 024539 201 AFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTS 236 (266)
Q Consensus 201 afd~Ai~~ld~l~ee~y~ds~~IlqLLrDNl~~W~~ 236 (266)
+|+.|+. ++ . .+.+...-+++..++-.+|..
T Consensus 113 ~~~kAl~-l~---P-~~~~y~~al~~~~ka~el~~~ 143 (158)
T 1zu2_A 113 FFQQAVD-EQ---P-DNTHYLKSLEMTAKAPQLHAE 143 (158)
T ss_dssp HHHHHHH-HC---T-TCHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHH-hC---C-CCHHHHHHHHHHHhCHhccCc
Confidence 5666654 22 1 123455567777888877764
No 155
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=40.11 E-value=1.1e+02 Score=22.75 Aligned_cols=44 Identities=16% Similarity=0.041 Sum_probs=28.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAy 52 (266)
+-+..++.+..+.|+|++++..+++++..+|. +.+-...+..+|
T Consensus 22 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~ 65 (148)
T 2vgx_A 22 EQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACR 65 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHH
Confidence 34556777777778888888888887776654 333344455544
No 156
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=39.83 E-value=1.2e+02 Score=22.93 Aligned_cols=62 Identities=8% Similarity=0.037 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQ 71 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieq 71 (266)
-+..++.+..+.|+|++++.++.+++...|.. ..-...+..+|-...+....+...+....+
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPDS-AEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 45678888899999999999999999876653 444455555554432556666666655443
No 157
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=39.62 E-value=1.3e+02 Score=23.07 Aligned_cols=53 Identities=11% Similarity=0.036 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhccC--------CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADL--------PPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAF 202 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L--------~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~af 202 (266)
+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++++
T Consensus 88 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 88 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 568889999886542100 00334455666777777665 699999988766654
No 158
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=39.59 E-value=67 Score=24.44 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=23.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~L 40 (266)
+-+..++.+..+.|+|++++.++.+++..+|..
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 344567777777788888888888877776654
No 159
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=39.57 E-value=53 Score=21.27 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=41.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
.-+..++.+..+.|+|++++.++++++..+|.- ..=...+..+|-. .+....+...+..
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~ 68 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNAYYK-QGDYDEAIEYYQK 68 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 345678888999999999999999999877653 4444455555543 4455566666654
No 160
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=39.13 E-value=1.1e+02 Score=22.38 Aligned_cols=78 Identities=9% Similarity=0.144 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhh---hhcchhhHHHHHHHHHHHHHHHHHH
Q 024539 23 YDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE---AKGNEVNAKRIKEYRQKVESELSDI 99 (266)
Q Consensus 23 y~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~---~~~~~~~~~~l~~yk~ki~~EL~~~ 99 (266)
|.....-+...+..-+.++-++|+-........+..-..=++.+. +|-+.- ..........++.||..+..+|..-
T Consensus 10 f~~~~~~i~~~l~~~~~~~ge~Rk~~i~~ie~~ldEA~ell~qMe-lE~~~~~~p~~~R~~~~~klr~Yk~dl~~~lk~~ 88 (97)
T 3onj_A 10 FKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMD-VEVNNSIGDASERATYKAKLREWKKTIQSDIKRP 88 (97)
T ss_dssp HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455545445688889999888888777776554444432 222211 1112245678889988887766544
Q ss_pred HH
Q 024539 100 CN 101 (266)
Q Consensus 100 C~ 101 (266)
-+
T Consensus 89 lk 90 (97)
T 3onj_A 89 LQ 90 (97)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 161
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=38.82 E-value=50 Score=27.83 Aligned_cols=50 Identities=16% Similarity=0.090 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhc--cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024539 153 KAYETATTAAEA--DLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (266)
Q Consensus 153 ~aY~~A~~~a~~--~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai 206 (266)
.-|++|....+. .+.|.+ .....+.+..|+ -+|+.++|+...++|+...-
T Consensus 52 ~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 52 QQPEQALADCRRALELDGQS---VKAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TCHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 345666655543 344444 344455555554 47888888888888776543
No 162
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=38.77 E-value=48 Score=22.27 Aligned_cols=29 Identities=7% Similarity=0.061 Sum_probs=20.2
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024539 11 VYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (266)
Q Consensus 11 ~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~ 39 (266)
+.+|....+.|+|++++..+++++..+|.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 32 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV 32 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 45666667777777777777777766554
No 163
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=38.21 E-value=1.3e+02 Score=22.65 Aligned_cols=75 Identities=11% Similarity=-0.087 Sum_probs=49.4
Q ss_pred hHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHH
Q 024539 120 STVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAK 199 (266)
Q Consensus 120 skvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk 199 (266)
..+..+-..|..|...-+ .+.|...|++|+.++.. . .+|...+.+++.-...|.-.|+.++|+...+
T Consensus 105 ~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 171 (203)
T 3gw4_A 105 AASANAYEVATVALHFGD----------LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWL 171 (203)
T ss_dssp HHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 344444555665544422 35789999999999853 2 3455555555555555556899999999888
Q ss_pred HHHHHHHH
Q 024539 200 QAFDEAIS 207 (266)
Q Consensus 200 ~afd~Ai~ 207 (266)
+|++-+-.
T Consensus 172 ~al~~~~~ 179 (203)
T 3gw4_A 172 RARDIFAE 179 (203)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87776643
No 164
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=36.73 E-value=1.6e+02 Score=23.55 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=45.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHhhh-------hhhhHHHHHHHHHHhh
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE--LTVEERNLLSVGYKNV-------IGARRASWRILSSIEQ 71 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~--Ls~eERnLLsvAyKn~-------i~~~R~s~R~l~~ieq 71 (266)
+-+..++.+..+.|+|++++..+++++...|. ...+=...+..+|-.. .+....|...+..+..
T Consensus 53 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 125 (261)
T 3qky_A 53 DAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFID 125 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHH
Confidence 34568899999999999999999999987664 3344455566665442 5666667777665443
No 165
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=34.60 E-value=2.1e+02 Score=24.24 Aligned_cols=111 Identities=19% Similarity=0.287 Sum_probs=59.3
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHHHHHHHHH
Q 024539 13 VAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKV 92 (266)
Q Consensus 13 ~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l~~yk~ki 92 (266)
.|+|.+...+|--||+-+|.-.. +..|..|.=.-||=-+.. ++.+. ....++..=+..-.+-
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~-----nf~e~RLiYDHYKlKvdE----------LEK~~---KdSeKI~RNQsKLssA 161 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK-----ETDKYRERYDHYKVKLDN----------LEKKN---KDQERIERNQQKFKDA 161 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH----------HHHHT---CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHhHHH----------HHhcc---chHHHHHHhHHHhhhH
Confidence 57777777777777777754221 123444444445543332 22211 1112222222222333
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhc
Q 024539 93 ESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEA 164 (266)
Q Consensus 93 ~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~ 164 (266)
+.--..+|-++|+-.+ ++-|.|||.++|..+. +=...--|-+|++.|.+
T Consensus 162 EtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 162 EAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 4445667777776665 4557888888886543 22334458888888854
No 166
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=33.44 E-value=2.9e+02 Score=25.38 Aligned_cols=32 Identities=9% Similarity=-0.067 Sum_probs=25.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE 39 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~ 39 (266)
+-+..++.+..+.|+|++++.+++++++.+|.
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 55 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPG 55 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34567788888889999999999999887665
No 167
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=32.89 E-value=60 Score=24.56 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHhhhh
Q 024539 21 ERYDEMVDAMKNVAKLD-VELTVEERNLLSVGYKNVI 56 (266)
Q Consensus 21 eRy~Dmi~~mk~~i~~~-~~Ls~eERnLLsvAyKn~i 56 (266)
++|+.++..++.+-..+ ..++.+++-.|---||..+
T Consensus 10 ~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhc
Confidence 56888888888764432 3689999988888888864
No 168
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=32.29 E-value=1.1e+02 Score=23.58 Aligned_cols=59 Identities=19% Similarity=0.157 Sum_probs=41.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
.-+..+|.+..+.|+|++++.+..+++..+|.- ..=...+..+|- ..+....|...+..
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~-~~~~~~~A~~~~~~ 147 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN-VKALYKLGVANM-YFGFLEEAKENLYK 147 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHH-HHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHH-HcccHHHHHHHHHH
Confidence 345578888889999999999999999886653 444555666653 34555666666654
No 169
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=32.20 E-value=93 Score=23.28 Aligned_cols=48 Identities=17% Similarity=0.190 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCCh--HHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSP--ERACHLAKQAFDE 204 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~--~~Ai~iAk~afd~ 204 (266)
+.|..+|++|+.+. |.+| ....+++..+|.-.|+. ++|+...++++..
T Consensus 61 ~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 61 SNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 57899999998764 3444 34556666656567887 9998887777643
No 170
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=31.97 E-value=1.2e+02 Score=25.40 Aligned_cols=48 Identities=10% Similarity=0.141 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
.+.|...|++|+. ++|.+|.. +-++++.|+.. .|+.++|+.+-++|+.
T Consensus 115 ~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~-~~~~~~A~~~~~~a~~ 162 (308)
T 2ond_A 115 YEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARR-AEGIKSGRMIFKKARE 162 (308)
T ss_dssp HHHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHH-HHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 3566667766653 56666632 56677777665 5777777665555544
No 171
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=31.35 E-value=1.3e+02 Score=25.08 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=24.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~L 40 (266)
+-...+|.+..+.|||++++..+.+++..+|..
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 345567777788888888888888888777665
No 172
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=31.34 E-value=1.9e+02 Score=22.77 Aligned_cols=46 Identities=4% Similarity=-0.122 Sum_probs=34.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH--HHHHHHHHHHh
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV--EERNLLSVGYK 53 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~--eERnLLsvAyK 53 (266)
+-+..++.+..+.|+|++++..+++++...|.-.. +-.-.+..+|-
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~ 89 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNM 89 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHH
Confidence 34677899999999999999999999988776443 23444555553
No 173
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=30.92 E-value=1.4e+02 Score=20.87 Aligned_cols=58 Identities=10% Similarity=-0.061 Sum_probs=36.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS 67 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~ 67 (266)
+.+..++....+.|+|++++.++.+++..+|.- ..=...+..+|-. .+....|...+.
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~~a~~~~~-~~~~~~A~~~~~ 62 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED-ARGYSNRAAALAK-LMSFPEAIADCN 62 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHH-hcCHHHHHHHHH
Confidence 455667777788888888888888888776653 3444555555543 344444544443
No 174
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=30.66 E-value=1.9e+02 Score=22.55 Aligned_cols=28 Identities=14% Similarity=0.087 Sum_probs=24.8
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q 024539 13 VAKLAEQAERYDEMVDAMKNVAKLDVEL 40 (266)
Q Consensus 13 ~Aklaeq~eRy~Dmi~~mk~~i~~~~~L 40 (266)
++.+..+.|+|++++.+++++++.+|.-
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 7888899999999999999999887763
No 175
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=30.60 E-value=1.3e+02 Score=20.69 Aligned_cols=57 Identities=14% Similarity=0.009 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCH--HHHHHHHHHHhhhhhhhHHHHHHHH
Q 024539 10 FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTV--EERNLLSVGYKNVIGARRASWRILS 67 (266)
Q Consensus 10 l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~--eERnLLsvAyKn~i~~~R~s~R~l~ 67 (266)
+..+|....+.|+|++++..+++++...|.-.. +-...+..+|-. .+....|...+.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~ 63 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFR 63 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 345566666666666666666666655444332 333334443322 233444444443
No 176
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=30.54 E-value=1.6e+02 Score=21.65 Aligned_cols=70 Identities=6% Similarity=-0.088 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLR 228 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai~~ld~l~ee~y~ds~~IlqLLr 228 (266)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.+.-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 5678888888765 45554 344555555554 79999998876665543 2222223455555555
Q ss_pred hhHhhhc
Q 024539 229 DNLTLWT 235 (266)
Q Consensus 229 DNl~~W~ 235 (266)
.-+..+.
T Consensus 143 ~~~~~~~ 149 (162)
T 3rkv_A 143 ERRAEKK 149 (162)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5555443
No 177
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=30.13 E-value=1.9e+02 Score=22.40 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=40.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
.-...++.+..+.|+|++++.++++++..+|. +..=...+..+|.. .+....|...+..
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 101 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRD-MKNNQEYIATLTE 101 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHH-cccHHHHHHHHHH
Confidence 34566888999999999999999999988776 33344455555533 3445556555544
No 178
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=29.11 E-value=99 Score=30.67 Aligned_cols=46 Identities=13% Similarity=0.168 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|.++|++|+++ .|.+ .....|.+..|++ +|+.++|+...++|+.
T Consensus 94 ~~A~~~~~kAl~l-----~P~~---~~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 94 QGALQCYTRAIQI-----NPAF---ADAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5799999999865 3444 3445666666665 7999999998888865
No 179
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=27.88 E-value=1.7e+02 Score=20.96 Aligned_cols=59 Identities=14% Similarity=0.122 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSI 69 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~i 69 (266)
-+..++.+..+.|+|++++.++++++..+|.. ..-...+..+|.. .+....|...+...
T Consensus 49 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~~a~~~~~-~~~~~~A~~~~~~a 107 (166)
T 1a17_A 49 YYGNRSLAYLRTECYGYALGDATRAIELDKKY-IKGYYRRAASNMA-LGKFRAALRDYETV 107 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHHH-hccHHHHHHHHHHH
Confidence 45678888899999999999999999887653 4445555555543 45566666666543
No 180
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=27.26 E-value=1.8e+02 Score=28.17 Aligned_cols=52 Identities=15% Similarity=0.034 Sum_probs=34.9
Q ss_pred hccccChhHHHHHHHHHHHHHHHHHHHhccCCCC-CcchHHHhhhHHHHHHHHhC
Q 024539 136 AEFKFGDEKKEAAANSMKAYETATTAAEADLPPT-HPIRLGLALNFSVFYYEIMN 189 (266)
Q Consensus 136 aE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt-~PirLgLaLN~SVF~yEi~~ 189 (266)
+|....+.-.+++++|.++|++|++..+. +..| +|--.-..||-| -.||..|
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~a-k~yE~aG 488 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNAA-KKHEMAG 488 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHHH-HHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHh-hhhhhcc
Confidence 56667777778999999999999999964 5544 444333444433 3366543
No 181
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=27.20 E-value=24 Score=26.31 Aligned_cols=61 Identities=11% Similarity=0.238 Sum_probs=37.6
Q ss_pred ChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcchHH----HhhhHHHHHH
Q 024539 118 GESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLG----LALNFSVFYY 185 (266)
Q Consensus 118 ~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~PirLg----LaLN~SVF~y 185 (266)
+.+.+|+ .|+..-|+-.+...-+ .-+....+..+.|++--+ ..|.||..|+ +.-+|++|+-
T Consensus 4 ~~~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L~--~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 4 PPTPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANLT--KNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp CCCCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHHH--HSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3345565 4555556666544321 124456667777775543 6889999998 6667777653
No 182
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=27.00 E-value=1e+02 Score=28.49 Aligned_cols=8 Identities=13% Similarity=0.102 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 024539 151 SMKAYETA 158 (266)
Q Consensus 151 A~~aY~~A 158 (266)
|...|++|
T Consensus 59 A~~~~~~a 66 (477)
T 1wao_1 59 ALGDATRA 66 (477)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 183
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=26.65 E-value=53 Score=28.65 Aligned_cols=49 Identities=14% Similarity=0.168 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCc--------------chHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 149 ANSMKAYETATTAAEADLPPTHP--------------IRLGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 149 e~A~~aY~~A~~~a~~~L~pt~P--------------irLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 184
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=26.35 E-value=73 Score=26.07 Aligned_cols=74 Identities=16% Similarity=0.132 Sum_probs=48.7
Q ss_pred CCCChhHHHHHHhhcccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCC----CcchHHHhhhHHHHHHHHhCC
Q 024539 115 ASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPT----HPIRLGLALNFSVFYYEIMNS 190 (266)
Q Consensus 115 ~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt----~PirLgLaLN~SVF~yEi~~~ 190 (266)
+.++++-.-|+++--.. -.+..+ ...++-.+.|++|.. .+||. ..-+.-|-++|+.| .++ +|
T Consensus 10 p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D 75 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QE 75 (161)
T ss_dssp CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HC
T ss_pred CCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cC
Confidence 45677777777763221 001122 567788899998864 46664 34556689999998 455 89
Q ss_pred hHHHHHHHHHHH
Q 024539 191 PERACHLAKQAF 202 (266)
Q Consensus 191 ~~~Ai~iAk~af 202 (266)
+++|.++=+.|.
T Consensus 76 ~d~aR~vy~~a~ 87 (161)
T 4h7y_A 76 PDDARDYFQMAR 87 (161)
T ss_dssp GGGCHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888777763
No 185
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=24.19 E-value=55 Score=27.53 Aligned_cols=39 Identities=23% Similarity=0.456 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024539 148 AANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI 206 (266)
Q Consensus 148 ~e~A~~aY~~A~~~a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk~afd~Ai 206 (266)
-+.|.++|++|..- . ..|. +++...+|+.|||.+||.=.
T Consensus 19 YE~A~~~Ye~a~~n---g---~~pQ--------------~~Kql~KA~NIAKse~drd~ 57 (199)
T 3ub0_A 19 YEKARADLEEAKKN---D---VSPQ--------------LLKQLTKACNIAKSEFEREA 57 (199)
T ss_dssp HHHHHHHHHHHHHT---T---CCHH--------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---C---CCHH--------------HHHHHHHHHHHHHHHHhHHH
Confidence 46788888888422 2 2232 35678899999999998633
No 186
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=23.92 E-value=25 Score=28.20 Aligned_cols=74 Identities=14% Similarity=0.215 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCChhHHHHHHhhcccccchhccccCh--hHHHHHHHHHHHHHHHHHHHhccCCCCCc
Q 024539 95 ELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGD--EKKEAAANSMKAYETATTAAEADLPPTHP 171 (266)
Q Consensus 95 EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~--~~~~~~e~A~~aY~~A~~~a~~~L~pt~P 171 (266)
+|-.-...+.+.|...| .+-+|++|.|.-+|.+-+---.++...|. ...++.. ..+.|+.-.+-+++.|..+-|
T Consensus 61 ~L~~K~~~l~~~lk~Ki--~~L~Peak~Fv~kli~~~r~l~~~~~~G~k~~~~~lK~-~~~~ykaLS~~aK~dL~k~FP 136 (140)
T 2w9y_A 61 ELGKRLATVLEGNKKRL--DGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAKR-LHQEFQSLSSEDQAALRKNNP 136 (140)
T ss_dssp HHHHHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCTHHHHH-HHHHHHTSCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHH-HHHHHHcCCHHHHHHHHHhCc
Confidence 44555556667777777 45678999999998776655555543332 1112212 226666544444444444433
No 187
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=22.31 E-value=3e+02 Score=21.94 Aligned_cols=26 Identities=4% Similarity=0.123 Sum_probs=14.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHh
Q 024539 10 FVYVAKLAEQAERYDEMVDAMKNVAK 35 (266)
Q Consensus 10 l~~~Aklaeq~eRy~Dmi~~mk~~i~ 35 (266)
+..++.+..+.++|++++.++++.++
T Consensus 9 ~~~lg~~~~~~~~~~~A~~~~~~a~~ 34 (273)
T 1ouv_A 9 LVGLGAKSYKEKDFTQAKKYFEKACD 34 (273)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 34455555555555555555555554
No 188
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=22.23 E-value=3.7e+02 Score=22.97 Aligned_cols=58 Identities=5% Similarity=0.016 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024539 9 NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS 68 (266)
Q Consensus 9 ~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAyKn~i~~~R~s~R~l~~ 68 (266)
-+..+|.+..+.|+|++++.++.+++..+|.. ..=...+..+|-. .+....|...+..
T Consensus 198 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~-~g~~~~A~~~~~~ 255 (336)
T 1p5q_A 198 SHLNLAMCHLKLQAFSAAIESCNKALELDSNN-EKGLSRRGEAHLA-VNDFELARADFQK 255 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 45678888889999999999999999987763 4444555555543 3445555555543
No 189
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=21.28 E-value=1.1e+02 Score=27.40 Aligned_cols=62 Identities=13% Similarity=0.080 Sum_probs=41.7
Q ss_pred cccccchhccccChhHHHHHHHHHHHHHHHHHHHhccCCCCCcch-HHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024539 129 GDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIR-LGLALNFSVFYYEIMNSPERACHLAKQAFD 203 (266)
Q Consensus 129 gDyyRYlaE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~Pir-LgLaLN~SVF~yEi~~~~~~Ai~iAk~afd 203 (266)
|-+|-.+=++.-|+. ++|.+.|++|+.+. |-. +..-.-|+-|+..-.++++.|....++|+.
T Consensus 206 G~lY~~vPp~~gGd~-----ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 206 TKFYAAAPESFGGGM-----EKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHSCTTTTCCH-----HHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccCCCH-----HHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 444433334444543 57999999999774 322 455667777777767899998887777655
No 190
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=21.22 E-value=1.2e+02 Score=25.33 Aligned_cols=31 Identities=6% Similarity=0.021 Sum_probs=23.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDV 38 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~ 38 (266)
+.+..++.+..+.|+|++++.++.+++..+|
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNP 35 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3456677788888888888888888776554
No 191
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=21.22 E-value=4.7e+02 Score=25.14 Aligned_cols=188 Identities=18% Similarity=0.261 Sum_probs=97.2
Q ss_pred CCHHHHHHHHHHHHhcCCCCCHH---HHHHHHHH---HhhhhhhhHHHHHHHHHHhhhhhhhcchhhHHHHHHHHHHHH-
Q 024539 21 ERYDEMVDAMKNVAKLDVELTVE---ERNLLSVG---YKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVE- 93 (266)
Q Consensus 21 eRy~Dmi~~mk~~i~~~~~Ls~e---ERnLLsvA---yKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~l~~yk~ki~- 93 (266)
++|..-+.-+++++........+ |-.+|-.| |..++..-+..+..|..-.+++...-+..-...+..||.++.
T Consensus 121 ~k~g~~l~~v~~~~~~~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k~~a 200 (526)
T 3iyk_A 121 EKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDA 200 (526)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHH
Confidence 45666677777777554445444 44566655 556777778888888766667654434444567777777653
Q ss_pred ------HHHHHHHHHHH-HHHHhhcCCCCCCChhHHHHHHhhcccccchhc-cc-cChhHHHH---HHHHHHHHHHHHHH
Q 024539 94 ------SELSDICNDIM-TVIDEHLIPSASAGESTVFFYKMKGDYYRYLAE-FK-FGDEKKEA---AANSMKAYETATTA 161 (266)
Q Consensus 94 ------~EL~~~C~eii-~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE-~~-~~~~~~~~---~e~A~~aY~~A~~~ 161 (266)
-|=..+-.|.| +++ -|-||.---.|| +. .|.--... ..-+...|+-.--+
T Consensus 201 L~~aIe~Er~~~~EEAIqe~~------------------dmsaeI~E~AaeEVP~vGag~At~iATaRaieg~yKLkkvI 262 (526)
T 3iyk_A 201 LKNAIEVERDGMQEEAIQEIA------------------GMTADVLEAASEEVPLIGAGMATAVATGRAIEGAYKLKKVI 262 (526)
T ss_pred HHHHHHHHHhHHHHHHHHHHh------------------cchHHHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222211 111 233343333332 11 12222211 22335566644332
Q ss_pred --------HhccCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHH--HHHHHHHHhhcccCccchHhHHHHHHHHHh
Q 024539 162 --------AEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAK--QAFDEAISELDTLNEESYKDSTLIMQLLRD 229 (266)
Q Consensus 162 --------a~~~L~pt~PirLgLaLN~SVF~yEi~~~~~~Ai~iAk--~afd~Ai~~ld~l~ee~y~ds~~IlqLLrD 229 (266)
.....|+.||--|..+|-. =+ .-.+|..-|.-+.. ..+++--.+++.+.++..+.....++--+.
T Consensus 263 ~aLtGidlsHl~~P~I~p~~iet~L~~-~~--~~i~D~~L~~~v~sK~~~v~E~~~Ev~Hi~~~i~P~~kk~~~~~~~ 337 (526)
T 3iyk_A 263 NALSGIDLTHLRTPKIEPSVVSTILEY-RA--KEIPDNALAVSVLSKNRAIQENHKELMHIKNEILPRFKKAMDEEKE 337 (526)
T ss_pred HHHhCCCchhccCCCCCHHHHHHHHhC-CC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3346899999999888842 01 12234333333322 346666666666666665555555544433
No 192
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=20.75 E-value=2.2e+02 Score=19.74 Aligned_cols=44 Identities=7% Similarity=-0.023 Sum_probs=27.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 024539 8 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGY 52 (266)
Q Consensus 8 e~l~~~Aklaeq~eRy~Dmi~~mk~~i~~~~~Ls~eERnLLsvAy 52 (266)
+.+..++.+....|+|++++.++++++..+|. +..=...+..+|
T Consensus 10 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~ 53 (137)
T 3q49_B 10 QELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCY 53 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHH
Confidence 44566677777777777777777777766655 233344444443
Done!