Query 024540
Match_columns 266
No_of_seqs 147 out of 938
Neff 4.7
Searched_HMMs 46136
Date Fri Mar 29 05:21:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024540.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024540hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02370 acyl-ACP thioesterase 100.0 2.2E-92 4.8E-97 681.2 26.6 255 1-255 1-256 (419)
2 PF12590 Acyl-thio_N: Acyl-ATP 100.0 7.8E-66 1.7E-70 422.7 9.0 124 1-125 1-129 (129)
3 PF01643 Acyl-ACP_TE: Acyl-ACP 100.0 1.3E-28 2.8E-33 223.1 13.5 121 136-256 1-121 (261)
4 PRK10800 acyl-CoA thioesterase 99.9 7.2E-22 1.6E-26 159.6 14.6 111 138-255 2-112 (130)
5 TIGR00051 acyl-CoA thioester h 99.9 1.9E-21 4.1E-26 151.5 13.1 106 143-255 2-107 (117)
6 TIGR02799 thio_ybgC tol-pal sy 99.9 7.1E-21 1.5E-25 151.3 13.2 109 139-255 1-110 (126)
7 cd00586 4HBT 4-hydroxybenzoyl- 99.8 3.7E-18 8E-23 128.0 13.6 109 139-254 1-109 (110)
8 COG0824 FcbC Predicted thioest 99.8 5.1E-18 1.1E-22 141.1 14.2 112 136-255 3-114 (137)
9 PRK07531 bifunctional 3-hydrox 99.7 2.8E-17 6E-22 161.6 14.7 113 135-255 342-454 (495)
10 PF13279 4HBT_2: Thioesterase- 99.7 1.4E-15 3.1E-20 120.2 13.5 103 145-255 1-105 (121)
11 COG3884 FatA Acyl-ACP thioeste 99.5 1.5E-14 3.2E-19 131.3 7.4 113 137-256 2-114 (250)
12 cd03440 hot_dog The hotdog fol 99.1 2.9E-09 6.2E-14 73.8 13.7 98 140-251 2-99 (100)
13 cd03442 BFIT_BACH Brown fat-in 98.9 5.7E-08 1.2E-12 75.9 13.9 104 137-255 6-114 (123)
14 PF03061 4HBT: Thioesterase su 98.8 1E-07 2.2E-12 69.1 11.2 79 153-245 1-79 (79)
15 cd03443 PaaI_thioesterase PaaI 98.7 9.1E-07 2E-11 68.2 14.0 102 136-252 11-112 (113)
16 PF01643 Acyl-ACP_TE: Acyl-ACP 98.6 3.3E-07 7.1E-12 83.4 9.7 97 135-251 162-259 (261)
17 PLN02370 acyl-ACP thioesterase 98.4 1.4E-06 3.1E-11 85.4 10.3 91 140-252 303-401 (419)
18 TIGR00369 unchar_dom_1 unchara 97.6 0.0038 8.2E-08 49.6 13.8 99 139-252 18-116 (117)
19 COG3884 FatA Acyl-ACP thioeste 97.6 0.0004 8.7E-09 63.9 8.8 90 138-253 152-241 (250)
20 TIGR02286 PaaD phenylacetic ac 97.3 0.011 2.5E-07 46.8 13.8 97 139-252 16-112 (114)
21 PRK10694 acyl-CoA esterase; Pr 97.0 0.021 4.6E-07 47.7 13.0 84 139-237 12-96 (133)
22 PRK10293 acyl-CoA esterase; Pr 96.3 0.17 3.7E-06 42.3 13.5 101 138-253 35-135 (136)
23 PRK11688 hypothetical protein; 96.1 0.2 4.3E-06 42.2 13.0 111 139-252 39-152 (154)
24 KOG3328 HGG motif-containing t 96.0 0.084 1.8E-06 45.6 10.3 98 139-250 39-136 (148)
25 cd03449 R_hydratase (R)-hydrat 95.9 0.099 2.1E-06 41.1 9.8 55 195-250 69-125 (128)
26 PRK10254 thioesterase; Provisi 95.6 0.71 1.5E-05 38.8 14.2 118 121-253 18-135 (137)
27 COG5496 Predicted thioesterase 95.5 0.76 1.7E-05 39.0 13.7 106 134-254 2-114 (130)
28 cd00556 Thioesterase_II Thioes 94.7 0.27 5.8E-06 36.9 8.1 57 194-251 41-97 (99)
29 COG4109 Predicted transcriptio 93.9 0.37 7.9E-06 47.4 9.2 101 132-249 326-426 (432)
30 COG2050 PaaI HGG motif-contain 93.8 2 4.3E-05 35.4 12.3 101 139-253 36-136 (141)
31 cd03455 SAV4209 SAV4209 is a S 93.5 0.73 1.6E-05 36.8 9.0 54 196-250 67-121 (123)
32 COG1607 Acyl-CoA hydrolase [Li 93.5 3.2 6.9E-05 36.2 13.4 85 140-238 15-99 (157)
33 cd03441 R_hydratase_like (R)-h 93.4 0.91 2E-05 35.3 9.2 56 194-250 66-125 (127)
34 cd01288 FabZ FabZ is a 17kD be 93.1 2 4.3E-05 33.9 10.9 80 161-252 50-129 (131)
35 cd00493 FabA_FabZ FabA/Z, beta 93.1 3.5 7.6E-05 32.3 13.1 85 154-248 42-126 (131)
36 cd03447 FAS_MaoC FAS_MaoC, the 91.9 1.7 3.7E-05 35.5 9.2 54 197-250 69-122 (126)
37 PF14539 DUF4442: Domain of un 91.8 3.9 8.4E-05 33.7 11.3 98 138-251 30-130 (132)
38 cd03453 SAV4209_like SAV4209_l 91.2 1.8 3.8E-05 34.8 8.5 52 198-250 70-125 (127)
39 cd03446 MaoC_like MoaC_like 91.0 1.5 3.2E-05 35.3 7.9 51 201-252 83-139 (140)
40 PLN02322 acyl-CoA thioesterase 90.9 9.7 0.00021 32.9 13.6 101 139-253 28-133 (154)
41 cd03454 YdeM YdeM is a Bacillu 90.9 1.2 2.6E-05 36.1 7.4 50 201-251 81-137 (140)
42 PRK13691 (3R)-hydroxyacyl-ACP 89.8 2.7 5.9E-05 36.3 9.0 55 197-252 85-143 (166)
43 PRK13692 (3R)-hydroxyacyl-ACP 89.7 2.8 6E-05 35.9 8.9 54 199-253 87-144 (159)
44 PF13452 MaoC_dehydrat_N: N-te 89.4 1.5 3.2E-05 35.2 6.6 52 194-246 73-131 (132)
45 cd03451 FkbR2 FkbR2 is a Strep 89.4 1.7 3.7E-05 35.2 7.1 50 201-251 84-140 (146)
46 PRK00006 fabZ (3R)-hydroxymyri 87.4 15 0.00032 30.2 14.2 101 138-252 36-143 (147)
47 cd03452 MaoC_C MaoC_C The C-t 86.2 5.5 0.00012 32.8 8.4 49 201-250 81-135 (142)
48 PRK08190 bifunctional enoyl-Co 85.5 6.4 0.00014 39.3 9.9 57 196-253 83-141 (466)
49 PLN02864 enoyl-CoA hydratase 85.2 3.9 8.5E-05 38.7 7.9 57 197-253 95-155 (310)
50 PF13622 4HBT_3: Thioesterase- 85.1 7.1 0.00015 34.5 9.1 54 196-252 34-87 (255)
51 TIGR01750 fabZ beta-hydroxyacy 84.4 20 0.00044 29.0 12.9 121 116-252 9-139 (140)
52 PRK04424 fatty acid biosynthes 84.4 12 0.00026 32.8 10.0 57 193-251 123-179 (185)
53 PLN02647 acyl-CoA thioesterase 83.5 34 0.00074 34.4 13.9 88 144-238 99-187 (437)
54 cd03445 Thioesterase_II_repeat 80.7 17 0.00037 28.2 8.6 53 197-251 40-92 (94)
55 PF07977 FabA: FabA-like domai 70.2 57 0.0012 26.4 10.3 102 139-248 27-138 (138)
56 TIGR02447 yiiD_Cterm thioester 68.2 68 0.0015 26.5 12.5 97 138-253 23-136 (138)
57 cd03444 Thioesterase_II_repeat 67.5 41 0.00089 26.5 7.9 55 195-250 47-101 (104)
58 TIGR00189 tesB acyl-CoA thioes 61.4 41 0.00089 30.3 7.7 52 198-251 46-97 (271)
59 KOG4366 Predicted thioesterase 58.7 5.1 0.00011 36.4 1.3 104 143-255 55-161 (213)
60 cd03448 HDE_HSD HDE_HSD The R 58.2 61 0.0013 26.3 7.5 48 196-248 70-117 (122)
61 PF01575 MaoC_dehydratas: MaoC 57.2 21 0.00045 28.4 4.5 41 194-234 74-114 (122)
62 COG2030 MaoC Acyl dehydratase 56.4 51 0.0011 27.9 7.0 56 196-253 94-154 (159)
63 PF13622 4HBT_3: Thioesterase- 54.0 80 0.0017 27.8 8.1 53 198-251 200-253 (255)
64 TIGR00189 tesB acyl-CoA thioes 53.7 83 0.0018 28.3 8.3 53 197-250 215-267 (271)
65 PRK13188 bifunctional UDP-3-O- 48.4 1.2E+02 0.0027 30.7 9.3 58 193-252 399-458 (464)
66 cd01287 FabA FabA, beta-hydrox 42.2 1.9E+02 0.0041 24.6 8.2 56 195-252 85-145 (150)
67 cd01289 FabA_like Domain of un 42.1 1.9E+02 0.0042 23.7 11.1 87 154-250 45-133 (138)
68 PF14765 PS-DH: Polyketide syn 41.2 1.8E+02 0.0039 25.8 8.4 58 192-250 225-284 (295)
69 TIGR02278 PaaN-DH phenylacetic 40.8 99 0.0021 32.4 7.5 50 201-251 604-659 (663)
70 PLN02647 acyl-CoA thioesterase 40.7 4E+02 0.0086 26.9 12.5 72 139-224 291-362 (437)
71 PRK11563 bifunctional aldehyde 40.6 87 0.0019 32.8 7.1 48 202-250 617-670 (675)
72 PF03756 AfsA: A-factor biosyn 39.4 2E+02 0.0044 23.1 12.5 88 152-252 39-131 (132)
73 PF03284 PHZA_PHZB: Phenazine 38.6 3.1 6.8E-05 36.3 -3.1 74 109-193 82-159 (162)
74 PRK10526 acyl-CoA thioesterase 35.1 2E+02 0.0042 26.8 7.9 53 197-251 56-108 (286)
75 COG1946 TesB Acyl-CoA thioeste 32.6 4.5E+02 0.0098 25.3 9.9 105 139-252 176-281 (289)
76 PLN02864 enoyl-CoA hydratase 32.3 2.2E+02 0.0049 26.9 7.9 49 197-250 254-302 (310)
77 COG0764 FabA 3-hydroxymyristoy 31.8 2.1E+02 0.0045 24.6 6.9 59 194-253 85-143 (147)
78 PF02551 Acyl_CoA_thio: Acyl-C 30.9 2.3E+02 0.005 24.1 6.9 99 140-249 29-128 (131)
79 PHA02582 10 baseplate wedge su 29.3 88 0.0019 32.7 4.8 46 193-238 218-266 (604)
80 PF09500 YiiD_Cterm: Putative 28.5 3.5E+02 0.0076 23.1 7.7 87 149-253 39-142 (144)
81 PF01947 DUF98: Protein of unk 25.9 2.7E+02 0.0059 23.6 6.6 28 224-253 43-70 (149)
82 COG1090 Predicted nucleoside-d 24.4 33 0.00071 33.0 0.8 43 49-94 98-143 (297)
83 PF10648 Gmad2: Immunoglobulin 23.2 1.5E+02 0.0033 23.1 4.2 42 208-250 7-49 (88)
84 PRK10526 acyl-CoA thioesterase 22.5 6.2E+02 0.014 23.4 11.7 101 141-251 178-280 (286)
No 1
>PLN02370 acyl-ACP thioesterase
Probab=100.00 E-value=2.2e-92 Score=681.22 Aligned_cols=255 Identities=79% Similarity=1.195 Sum_probs=248.2
Q ss_pred ChhccccccccccCCCCCCCcccccCCCCCCcCCccccCC-CCcceeeccccCCCcccCcceeecCCcccccCCCCCCCC
Q 024540 1 MVATAAASAFFPVSSPSGDSVAKTKNLGSANLGGIKSKSS-SGSLQVKANAQAPSKINGTSVGLTTPAESLKNGDISTSS 79 (266)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (266)
|||++|+|||||||+|++++++.+++.++++++|||+||+ +|+||||+||||+|||||++|+|+++++++|++|++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (419)
T PLN02370 1 MVATAATSSFFPVPSPSGDAKAKKFGSGSASLGGIKSKSASSGALQVKANAQAPPKINGSPVGLTGSVEIVKTDEDVVSS 80 (419)
T ss_pred CchhhhhcccccCCCCCCCcccccCCCCcccccccccCCCCCCceeeeccccCCCcccCceeecccccccccccccCCCC
Confidence 9999999999999999999977788889999999999999 899999999999999999999999999999999997769
Q ss_pred CCcccccccCCChHHHHHHHHHHHHHhhhhhcccccccCCCCCccCCCCcCccccCCceEEEEEEeecCCcCCCCCcCHH
Q 024540 80 PPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLVDPFGIGKIVQDGFIFRQNFSIRSYEIGADGTASIE 159 (266)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~a~e~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~vfe~~f~Ir~yE~D~~G~ls~~ 159 (266)
||||||||||||||||||||||||||||||||||||||||||||+|+||+|+|+|||++|+++|+|||||||.+|++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~f~Ir~yEvD~~g~lsl~ 160 (419)
T PLN02370 81 PAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLIDPFGIGRIVQDGLVFRQNFSIRSYEIGADRTASIE 160 (419)
T ss_pred CCCcchhhcCCcHHHHHHHHHHHHHhhhhhhhhhcccCCCCcccccccccCceeccCcEEEEEEEEeeEEECCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECC
Q 024540 160 TLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAK 239 (266)
Q Consensus 160 ~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~ 239 (266)
++||||||+|.+|++++|++++|||..++|.++|++|||+|++|+|+|||+|||+|+|+||+.++++++++|+|+|+|++
T Consensus 161 ~L~n~lQd~A~~Hs~~lGll~~Gfg~~~~m~~~gl~WVLtr~~I~~~R~P~~gD~V~V~Twv~~~~k~~~~Rdf~I~D~~ 240 (419)
T PLN02370 161 TLMNHLQETALNHVKTAGLLGDGFGSTPEMSKRNLIWVVTRMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCK 240 (419)
T ss_pred HHHHHHHHHHHHHHHHhCccccccccHHHHHhCCceEEEEEEEEEeCcCCCCCCEEEEEEEEeeCCCCEEEEEEEEEECC
Confidence 99999999999999999999999988789999999999999999999999999999999999999999999999999976
Q ss_pred CCcEEEEEEeeehhHH
Q 024540 240 TGETLTRATRWGIFWL 255 (266)
Q Consensus 240 dGeiLarAtS~WVlv~ 255 (266)
+|++|++|+|+||++.
T Consensus 241 ~Ge~la~A~SvWV~mD 256 (419)
T PLN02370 241 TGETLTRASSVWVMMN 256 (419)
T ss_pred CCeEEEEEEEEEEEEE
Confidence 8999999999999986
No 2
>PF12590 Acyl-thio_N: Acyl-ATP thioesterase; InterPro: IPR021113 This entry represents the N-terminal domain of acyl-ATP thioesterases from bacteria and eukaryotes. These proteins are typically between 120 and 131 amino acids in length. The plant acyl-acyl carrier protein (ACP) thioesterases (TEs) play an essential role in chain termination during de novo fatty acid synthesis [].; GO: 0016790 thiolester hydrolase activity
Probab=100.00 E-value=7.8e-66 Score=422.72 Aligned_cols=124 Identities=73% Similarity=1.036 Sum_probs=116.3
Q ss_pred ChhccccccccccCCCCCCCcc--cccCC--CCCCcCCccccCC-CCcceeeccccCCCcccCcceeecCCcccccCCCC
Q 024540 1 MVATAAASAFFPVSSPSGDSVA--KTKNL--GSANLGGIKSKSS-SGSLQVKANAQAPSKINGTSVGLTTPAESLKNGDI 75 (266)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (266)
|||++|+|||||||++++++++ +++|+ +++|+||||+|++ +|+||||||+||+|||||++|+|+++.+.++++|+
T Consensus 1 MvAtaAaSaFFpvps~~~~~~~~s~~~G~~p~sl~~rgik~k~~~sg~~qvKanaqA~pKiNG~~v~l~~~~~~~~~~~~ 80 (129)
T PF12590_consen 1 MVATAAASAFFPVPSPSPSPKASSGKLGNGPDSLDVRGIKAKSASSGGLQVKANAQAPPKINGSKVGLKTGSEGTKEDDS 80 (129)
T ss_pred ChhhhhhhhccCCCCCCCCCccccccCCCCCCcccccccccCcCCCCCeeeecCCcCCCcccCccccccccccccccccc
Confidence 9999999999999999999888 78888 7888889999999 89999999999999999999999997777665554
Q ss_pred CCCCCCcccccccCCChHHHHHHHHHHHHHhhhhhcccccccCCCCCccC
Q 024540 76 STSSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLVD 125 (266)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~e~~~~~~~~~~~~~~~~~~ 125 (266)
++||+||||||||||||||||||||||||||||||||||||||||||+|
T Consensus 81 -~~s~~pRTFiNQLPDWSMLLAAITTIFlAAEKQW~mLDwKpkRPDML~D 129 (129)
T PF12590_consen 81 -SSSPAPRTFINQLPDWSMLLAAITTIFLAAEKQWTMLDWKPKRPDMLVD 129 (129)
T ss_pred -CCCCCchhHhhhCccHHHHHHHHHHHHHHhhhhhhhhcccCCCcccccC
Confidence 7899999999999999999999999999999999999999999999998
No 3
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=99.96 E-value=1.3e-28 Score=223.07 Aligned_cols=121 Identities=34% Similarity=0.630 Sum_probs=96.5
Q ss_pred CceEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEE
Q 024540 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (266)
Q Consensus 136 g~vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V 215 (266)
|.+|+++|.|+++|||.+|++++..+++||||+|.+|++++|++.++||.+++|.+.|++|||+|++|++.|+|+|||+|
T Consensus 1 g~~y~~~~~v~~~e~d~~~~l~l~~l~~~~qe~a~~h~~~lG~~~~~~~~~~~l~~~~~~Wvl~r~~i~i~r~P~~~e~i 80 (261)
T PF01643_consen 1 GLVYEKEFTVRYYECDPNGRLKLSALLNYFQEAATEHAESLGFGMDYFGSTPELKKQGLAWVLSRYQIEIHRYPRWGEKI 80 (261)
T ss_dssp ---EEEEEE--GGGB-TTSBB-HHHHHHHHHHHHHHHHHHTT-SHHH------HHCTTEEEEEEEEEEEESS--BTT-EE
T ss_pred CceEEEEEEEcceeeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcccchhhhhHhhcCcEEEEEEEEEEEEecCCCCCEE
Confidence 67999999999999999999999999999999999999999998777766677999999999999999999999999999
Q ss_pred EEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehhHHH
Q 024540 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIFWLS 256 (266)
Q Consensus 216 ~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVlv~~ 256 (266)
+|+||+.+.+++++.|+|+|+|..+|++|++|+|.||++..
T Consensus 81 ~i~Tw~~~~~~~~~~R~f~i~d~~~G~~l~~a~s~WvliD~ 121 (261)
T PF01643_consen 81 TIETWPSGFKRFFAYRDFEIYDAEDGELLARATSIWVLIDL 121 (261)
T ss_dssp EEEEEEEEE-SSEEEEEEEEE--TTS-EEEEEEEEEEEEET
T ss_pred EEEEEeccCCCcEEEEEEEEEECCCCcEEEEEEEEEEEEEh
Confidence 99999999999999999999993389999999999999753
No 4
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=99.88 E-value=7.2e-22 Score=159.62 Aligned_cols=111 Identities=15% Similarity=0.157 Sum_probs=103.8
Q ss_pred eEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEE
Q 024540 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (266)
Q Consensus 138 vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V 217 (266)
+|..+++|+++|||.+||+++..|++|||+++.+|+...|++ . ..+.+.|.+||+++++++|.+++++||+|+|
T Consensus 2 ~f~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~~g~~-----~-~~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v 75 (130)
T PRK10800 2 LFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFS-----Q-QALLAERVAFVVRKMTVEYYAPARLDDMLEV 75 (130)
T ss_pred ceEEEEEEeehhcCCCCeEehHHHHHHHHHHHHHHHHHcCCC-----H-HHHHhCCCEEEEEEEEEEEcCcccCCCEEEE
Confidence 588899999999999999999999999999999999999873 3 5677789999999999999999999999999
Q ss_pred EEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehhHH
Q 024540 218 ETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIFWL 255 (266)
Q Consensus 218 ~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVlv~ 255 (266)
+||+.+.++.++...|+|++. +|+++++|.++||++.
T Consensus 76 ~t~v~~~~~~s~~~~~~i~~~-~g~~~a~~~~~~v~~d 112 (130)
T PRK10800 76 QSEITSMRGTSLTFTQRIVNA-EGTLLNEAEVLIVCVD 112 (130)
T ss_pred EEEEEeeCcEEEEEEEEEEcC-CCeEEEEEEEEEEEEE
Confidence 999999999999999999986 8999999999999885
No 5
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=99.87 E-value=1.9e-21 Score=151.51 Aligned_cols=106 Identities=12% Similarity=0.114 Sum_probs=97.8
Q ss_pred EEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEEEEe
Q 024540 143 FSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVS 222 (266)
Q Consensus 143 f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv~ 222 (266)
++|+++|||.+||+++..|++|||+++.+|++.+|++ . .++.+.|++|++++++++|+++|++||+|+|+||+.
T Consensus 2 ~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~~g~~-----~-~~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~~ 75 (117)
T TIGR00051 2 VRVYYEDTDAQGIVYHANYLRYCERARTEFLRSLGFP-----Q-SVLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQIE 75 (117)
T ss_pred EEEEEeccCCCcEEEehHHHHHHHHHHHHHHHHcCCC-----H-HHHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEEE
Confidence 6899999999999999999999999999999999873 3 577888999999999999999999999999999999
Q ss_pred ecCCceEEEEEEEEECCCCcEEEEEEeeehhHH
Q 024540 223 ASGKNGMRRDWLIRNAKTGETLTRATRWGIFWL 255 (266)
Q Consensus 223 ~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVlv~ 255 (266)
..++.++.++|+|++. +|++++.+.++||++.
T Consensus 76 ~~~~~s~~~~~~i~~~-~~~~~~~~~~~~v~~d 107 (117)
T TIGR00051 76 ELNGFSFVFSQEIFNE-DEALLKAATVIVVCVD 107 (117)
T ss_pred ecCcEEEEEEEEEEeC-CCcEEEeeEEEEEEEE
Confidence 9999999999999996 7888888888788764
No 6
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=99.86 E-value=7.1e-21 Score=151.33 Aligned_cols=109 Identities=17% Similarity=0.154 Sum_probs=100.9
Q ss_pred EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHh-hCCeEEEEEeeEEEEeecCCCCCEEEE
Q 024540 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMA-KKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~-k~Gl~WVVtR~qI~~~R~P~~gD~V~V 217 (266)
|+.+++||++|||++||+++..|++|||+++.++++++|++ . .++. +.|.+||+.+++|+|.+++++||+|+|
T Consensus 1 f~~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~~g~~-----~-~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v 74 (126)
T TIGR02799 1 FRWPIRVYYEDTDAGGVVYHANYLKFMERARTEWLRALGFE-----Q-SALLEETGLVFVVRSMELDYLKPARLDDLLTV 74 (126)
T ss_pred CcceEEEEEeccCCCceEEechHHHHHHHHHHHHHHHcCCC-----H-HHHhhcCCcEEEEEEEEEEEcCcccCCCEEEE
Confidence 56789999999999999999999999999999999999873 3 4564 569999999999999999999999999
Q ss_pred EEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehhHH
Q 024540 218 ETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIFWL 255 (266)
Q Consensus 218 ~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVlv~ 255 (266)
+||+.+.++.++.++|+|++ +|+++++|.++||++.
T Consensus 75 ~~~v~~~~~~~~~~~~~i~~--~g~~~a~~~~~~v~vd 110 (126)
T TIGR02799 75 TTRVVELKGASLVFAQEVRR--GDTLLCEATVEVACVD 110 (126)
T ss_pred EEEEEecCceEEEEEEEEEe--CCEEEEEEEEEEEEEE
Confidence 99999999999999999995 6999999999999875
No 7
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=99.79 E-value=3.7e-18 Score=128.03 Aligned_cols=109 Identities=20% Similarity=0.189 Sum_probs=101.7
Q ss_pred EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEE
Q 024540 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~ 218 (266)
|+.++.|+++|||.+||+++..|++|+++++..++...|++. .++.+.+..|++.+.+++|.+++.+||+|+|+
T Consensus 1 ~~~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~ 74 (110)
T cd00586 1 FTLEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLGY------DELEEQGLGLVVVELEIDYLRPLRLGDRLTVE 74 (110)
T ss_pred CcEEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHHcCCCH------HHHHhCCceEEEEEeEeeEcCccCCCCEEEEE
Confidence 567899999999999999999999999999999999999742 45678899999999999999999999999999
Q ss_pred EEEeecCCceEEEEEEEEECCCCcEEEEEEeeehhH
Q 024540 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIFW 254 (266)
Q Consensus 219 TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVlv 254 (266)
+|+.+.++..+.+.+++++. +|++++++.+.|+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~-~g~~~a~~~~~~~~~ 109 (110)
T cd00586 75 TRVLRLGRKSFTFEQEIFRE-DGELLATAETVLVCV 109 (110)
T ss_pred EEEEecCcEEEEEEEEEECC-CCeEEEEEEEEEEEe
Confidence 99999999999999999986 799999999999875
No 8
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=99.78 E-value=5.1e-18 Score=141.10 Aligned_cols=112 Identities=18% Similarity=0.222 Sum_probs=104.3
Q ss_pred CceEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEE
Q 024540 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (266)
Q Consensus 136 g~vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V 215 (266)
...|+.+++|+++|||++||+++..|+.|||+++.+.+++.|+ ++ .+|.+.|+.|+|.+.+|+|+++.++||++
T Consensus 3 ~~~~~~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar~~~l~~~g~-----~~-~~~~~~~~~~~v~~~~i~y~~p~~~~d~l 76 (137)
T COG0824 3 SFPFSTPIRVRYEDTDAMGHVNNANYLVFFEEARTEFLRALGF-----DY-ADLEEGGIAFVVVEAEIDYLRPARLGDVL 76 (137)
T ss_pred CcceEEEEEEEhhhcCcccEEecchHHHHHHHHHHHHHHHcCC-----CH-HHHhhCCcEEEEEEEEeEECCCccCCCEE
Confidence 3468899999999999999999999999999999999999876 34 67888899999999999999999999999
Q ss_pred EEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehhHH
Q 024540 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIFWL 255 (266)
Q Consensus 216 ~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVlv~ 255 (266)
+|+||+...++.++...|+|++. ++++++|.+++|++.
T Consensus 77 ~v~~~v~~~~~~s~~~~~~i~~~--~~l~a~~~~~~V~v~ 114 (137)
T COG0824 77 TVRTRVEELGGKSLTLGYEIVNE--DELLATGETTLVCVD 114 (137)
T ss_pred EEEEEEEeecCeEEEEEEEEEeC--CEEEEEEEEEEEEEE
Confidence 99999999999999999999996 499999999999875
No 9
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=99.74 E-value=2.8e-17 Score=161.59 Aligned_cols=113 Identities=11% Similarity=0.032 Sum_probs=103.9
Q ss_pred CCceEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCE
Q 024540 135 DGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDV 214 (266)
Q Consensus 135 dg~vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~ 214 (266)
+..+++.+++|+++|||.+||+++..|++|||+++.++++.+|++ . .+.+.+++|++++++|+|.+++++||+
T Consensus 342 ~~~~~~~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~~G~~-----~--~~~~~~~~~vvv~~~i~y~rp~~~gD~ 414 (495)
T PRK07531 342 SQPLRLVETKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRLIGVD-----A--AYVAAGHSYYTVETHIRHLGEAKAGQA 414 (495)
T ss_pred CCceEEEeEEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHHcCCC-----H--HHHhcCCcEEEEEEEEEEcccCCCCCE
Confidence 455778899999999999999999999999999999999999873 2 334558999999999999999999999
Q ss_pred EEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehhHH
Q 024540 215 VNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIFWL 255 (266)
Q Consensus 215 V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVlv~ 255 (266)
|+|+||+...++.++.+.|+|++. +|++++++.++||++.
T Consensus 415 v~I~t~v~~~~~~s~~~~~~i~~~-~g~l~A~g~~~~v~vD 454 (495)
T PRK07531 415 LHVETQLLSGDEKRLHLFHTLYDA-GGELIATAEHMLLHVD 454 (495)
T ss_pred EEEEEEEEecCCcEEEEEEEEECC-CCcEEEEEEEEEEEEE
Confidence 999999999999999999999985 8999999999999975
No 10
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=99.67 E-value=1.4e-15 Score=120.24 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=88.4
Q ss_pred eecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEEEEeec
Q 024540 145 IRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSAS 224 (266)
Q Consensus 145 Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~ 224 (266)
||++||| +||+++..|++||++++.+.+...|+. ..+.+.|+++++.+.+|+|.++.+++|+++|++++...
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~ar~~~~~~~g~~-------~~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~ 72 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEEAREEFLEELGLY-------DELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVEEI 72 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHHHHHHHHHHHTSC-------HHHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEEEE
T ss_pred CCHHHcc-CCeEcHHHHHHHHHHHHHHHHHhcchh-------hHHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEEEE
Confidence 6899999 999999999999999999999999872 67888999999999999999999999999999999999
Q ss_pred CCceEEEEEEEEECCCCcE--EEEEEeeehhHH
Q 024540 225 GKNGMRRDWLIRNAKTGET--LTRATRWGIFWL 255 (266)
Q Consensus 225 gk~~~~Rdf~I~D~~dGei--LarAtS~WVlv~ 255 (266)
++.++.-.++|++.++|+. ++++.+++|++.
T Consensus 73 ~~~s~~~~~~i~~~~~g~~~~~a~~~~~~v~~d 105 (121)
T PF13279_consen 73 GGKSFRFEQEIFRPADGKGELAATGRTVMVFVD 105 (121)
T ss_dssp ESSEEEEEEEEEECSTTEEEEEEEEEEEEEEEE
T ss_pred CCcEEEEEEEEEEcCCCceEEEEEEEEEEEEEe
Confidence 9999999999999545655 999999998864
No 11
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=99.53 E-value=1.5e-14 Score=131.25 Aligned_cols=113 Identities=21% Similarity=0.324 Sum_probs=102.3
Q ss_pred ceEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEE
Q 024540 137 FIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVN 216 (266)
Q Consensus 137 ~vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~ 216 (266)
.++.+++.+.+|+.|+.|++.+...|.+..+++..|.-.+|.+. -..+.+.++.|+|.|+.|++.|||.++|+|+
T Consensus 2 ~~~k~~~~vP~~~~d~~g~i~~~~~l~l~~~i~~~Qsi~lg~~~-----~~~lee~~l~WiV~~~~i~~ir~pef~e~it 76 (250)
T COG3884 2 SVDKQNMPVPFYWPDAVGDIDITSRLRLDLQIRGIQSIGLGQLD-----VAGLEEYHLLWIVRRTEIDVIRPPEFGEMIT 76 (250)
T ss_pred cchhhcCCCccchhhhcCCcchhhhhhhhhhhcceeecccchhh-----hhhHhhcCceEEEEEEEEEEeeccccCCcce
Confidence 46788999999999999999999999999999998887777432 1457889999999999999999999999999
Q ss_pred EEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehhHHH
Q 024540 217 VETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIFWLS 256 (266)
Q Consensus 217 V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVlv~~ 256 (266)
|+||+.++++++|+|+|.+.+ .|+.+.++.+.|+++..
T Consensus 77 i~t~~~s~~~ffcyrrf~~~~--~gg~Lie~~a~wilmn~ 114 (250)
T COG3884 77 IETWCSSISNFFCYRRFRLDG--RGGGLIEIEAFWILMNR 114 (250)
T ss_pred EEEeeccccceEEEEEEEEec--CCCcEEEEEEEEEEEcc
Confidence 999999999999999999998 48899999999999854
No 12
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=99.15 E-value=2.9e-09 Score=73.85 Aligned_cols=98 Identities=20% Similarity=0.163 Sum_probs=89.2
Q ss_pred EEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEE
Q 024540 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (266)
Q Consensus 140 e~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~T 219 (266)
...+.++.+|+|.+++++...++.++++++..++...+ . .+..+++.+++++|.+++..||.|.+++
T Consensus 2 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~~g~~v~~~~ 68 (100)
T cd03440 2 VLRLTVTPEDIDGGGIVHGGLLLALADEAAGAAAARLG---------G----RGLGAVTLSLDVRFLRPVRPGDTLTVEA 68 (100)
T ss_pred EEEEEeCHHHcCcCCccchHHHHHHHHHHHHHHHHHhc---------c----CCCeEEEEEEEeEEecCCCCCCEEEEEE
Confidence 35789999999999999999999999999999987664 1 5778999999999999999999999999
Q ss_pred EEeecCCceEEEEEEEEECCCCcEEEEEEeee
Q 024540 220 WVSASGKNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 220 Wv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
++...++..+..+..+.+. +|++++.+...+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 99 (100)
T cd03440 69 EVVRVGRSSVTVEVEVRNE-DGKLVATATATF 99 (100)
T ss_pred EEEeccccEEEEEEEEECC-CCCEEEEEEEEe
Confidence 9999999899999999986 799999997765
No 13
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=98.91 E-value=5.7e-08 Score=75.88 Aligned_cols=104 Identities=13% Similarity=0.002 Sum_probs=86.0
Q ss_pred ceEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEee-EEEEeecCCCCCEE
Q 024540 137 FIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRM-QVVVDRYPTWNDVV 215 (266)
Q Consensus 137 ~vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~-qI~~~R~P~~gD~V 215 (266)
-.++..+.|++.+||..|+++...|+.++.+++...+.... .. ..+.... +++|.+|..+||.|
T Consensus 6 ~~~~~~~~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~~~~-------------~~--~~~~~~~~~~~f~~p~~~gd~l 70 (123)
T cd03442 6 TELSTRELVLPEDTNHHGTIFGGWLLEWMDELAGIAAYRHA-------------GG--RVVTASVDRIDFLKPVRVGDVV 70 (123)
T ss_pred cceEEEEEeCCcccCcCCcEeHHHHHHHHHHHHHHHHHHHh-------------CC--cEEEEEECceEEcCccccCcEE
Confidence 35788999999999999999999999999999876653221 11 2334444 79999999999999
Q ss_pred EEEEEEeecCCceEEEEEEEEECC----CCcEEEEEEeeehhHH
Q 024540 216 NVETWVSASGKNGMRRDWLIRNAK----TGETLTRATRWGIFWL 255 (266)
Q Consensus 216 ~V~TWv~~~gk~~~~Rdf~I~D~~----dGeiLarAtS~WVlv~ 255 (266)
.+++++...++..+..++++++.+ +++++++|..++|++.
T Consensus 71 ~i~~~v~~~g~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~ 114 (123)
T cd03442 71 ELSARVVYTGRTSMEVGVEVEAEDPLTGERRLVTSAYFTFVALD 114 (123)
T ss_pred EEEEEEEEecCCeEEEEEEEEEecCCCCcEEEEEEEEEEEEEEC
Confidence 999999999999999999999862 2469999999988763
No 14
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=98.81 E-value=1e-07 Score=69.13 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=71.8
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEE
Q 024540 153 DGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRD 232 (266)
Q Consensus 153 ~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rd 232 (266)
+|+++...|+.|+++++...+...+. .+...++...+++|.+|.+.||+|++++|+...++..+.-+
T Consensus 1 ~G~v~~g~~~~~~d~a~~~~~~~~~~-------------~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~ 67 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAASAALRSHGG-------------DGRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKSFTVE 67 (79)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHS-------------STEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSEEEEE
T ss_pred CCEEhHHHHHHHHHHHHHHHHHHhcc-------------CCcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEEEEEE
Confidence 58999999999999999999988864 17899999999999999999999999999999999999999
Q ss_pred EEEEECCCCcEEE
Q 024540 233 WLIRNAKTGETLT 245 (266)
Q Consensus 233 f~I~D~~dGeiLa 245 (266)
+++++. +++++|
T Consensus 68 ~~v~~~-~~~~~~ 79 (79)
T PF03061_consen 68 VEVYSE-DGRLCA 79 (79)
T ss_dssp EEEEET-TSCEEE
T ss_pred EEEEEC-CCcEEC
Confidence 999997 787765
No 15
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=98.69 E-value=9.1e-07 Score=68.24 Aligned_cols=102 Identities=10% Similarity=-0.007 Sum_probs=89.3
Q ss_pred CceEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEE
Q 024540 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (266)
Q Consensus 136 g~vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V 215 (266)
+...+..+.+...+||..|.++-..|+.+++.++...+.... ..+...++.+++++|.+|+.. ++|
T Consensus 11 ~~~~~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~~~-------------~~~~~~~~~~~~i~f~~p~~~-~~v 76 (113)
T cd03443 11 PGRVVLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALSAL-------------PPGALAVTVDLNVNYLRPARG-GDL 76 (113)
T ss_pred CCeEEEEeeCcHhhcCCCCeEeHHHHHHHHHHHHHHHHhhcc-------------CCCCceEEEEEEEeEEcCCCC-CeE
Confidence 335778899999999999999999999999999887665442 135577899999999999999 999
Q ss_pred EEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 216 ~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
++++++...++....-+.++++. +|+++++|+.+|+
T Consensus 77 ~~~~~v~~~g~~~~~~~~~~~~~-~~~~~a~a~~~~~ 112 (113)
T cd03443 77 TARARVVKLGRRLAVVEVEVTDE-DGKLVATARGTFA 112 (113)
T ss_pred EEEEEEEecCceEEEEEEEEECC-CCCEEEEEEEEEe
Confidence 99999999999899999999986 6999999999886
No 16
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=98.57 E-value=3.3e-07 Score=83.44 Aligned_cols=97 Identities=16% Similarity=0.266 Sum_probs=69.2
Q ss_pred CCceEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCE
Q 024540 135 DGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDV 214 (266)
Q Consensus 135 dg~vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~ 214 (266)
....+..+++||++|+|.|||+||..|++|+.|+--. ++.+ .-.+.++.|.|.+...+||+
T Consensus 162 ~~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~----------------~~~~---~~~~~~i~I~y~~E~~~gd~ 222 (261)
T PF01643_consen 162 EEPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPE----------------EFLE---KYQIKSIDINYKKEIRYGDT 222 (261)
T ss_dssp -TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-H----------------HHHC---CEEEEEEEEEE-S--BTT-E
T ss_pred hhhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcc----------------hhhc---cCCcEEEEEEEccccCCCCE
Confidence 4556789999999999999999999999999884322 2222 22478999999999999999
Q ss_pred EEEEEEEeec-CCceEEEEEEEEECCCCcEEEEEEeee
Q 024540 215 VNVETWVSAS-GKNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 215 V~V~TWv~~~-gk~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
|.+.+.+... ..-...-.+.|++. +|+++++|.+.|
T Consensus 223 i~~~~~~~~~~~~~~~~~~h~i~~~-~g~~~~~~~~~W 259 (261)
T PF01643_consen 223 ITSYTEVEKDEEEDGLSTLHEIRNE-DGEEVARARTEW 259 (261)
T ss_dssp EEEEEEEEEECCTTEEEEEEEEECT--TCEEEEEEEEE
T ss_pred EEEEEEEcccccCCceEEEEEEEcC-CCceEEEEEEEE
Confidence 9999986543 33344556778886 599999999998
No 17
>PLN02370 acyl-ACP thioesterase
Probab=98.41 E-value=1.4e-06 Score=85.42 Aligned_cols=91 Identities=15% Similarity=0.172 Sum_probs=67.4
Q ss_pred EEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEE
Q 024540 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (266)
Q Consensus 140 e~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~T 219 (266)
+..|.||++|+|.|||+||..|++|+.|+.-. +..+.+ -+.++.|+|++...+||.|++.+
T Consensus 303 ~~~~~VRysDLD~NgHVNNvkYi~Wild~lP~----------------e~l~~~---~l~~i~I~Y~kE~~~gd~V~s~~ 363 (419)
T PLN02370 303 RKGLTPRWSDLDVNQHVNNVKYIGWILESAPP----------------PIMESH---ELAAITLEYRRECGRDSVLQSLT 363 (419)
T ss_pred eeeeeecHHHCcccCccccHHHHHHHHhhCch----------------hhhhcc---eEEEEEEEEcccCCCCCEEEEEE
Confidence 45599999999999999999999999984321 211222 37889999999999999999887
Q ss_pred EEeec--------CCceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 220 WVSAS--------GKNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 220 Wv~~~--------gk~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
-..+. +...+. ..+.+. +|++++++.+.|-
T Consensus 364 ~~~~~~~~~~~~~~~~~~~--h~~~~~-dG~e~a~a~t~Wr 401 (419)
T PLN02370 364 AVSGTGIGNLGTAGDVECQ--HLLRLE-DGAEIVRGRTEWR 401 (419)
T ss_pred eecccccccccCCCcceEE--EEEEcC-CCeEEEEEEEEEE
Confidence 75321 111232 234444 8999999999985
No 18
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=97.58 E-value=0.0038 Score=49.57 Aligned_cols=99 Identities=8% Similarity=-0.070 Sum_probs=80.2
Q ss_pred EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEE
Q 024540 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~ 218 (266)
-+..+.++...++..|.++=..++.+++.++.--.... ...+...+-..++|+|.||++-| .|+++
T Consensus 18 ~~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~~~-------------~~~~~~~vt~~l~i~f~~p~~~g-~l~a~ 83 (117)
T TIGR00369 18 LEATMPVDERTLQPFGSLHGGVSAALADTAGSAAGYLC-------------NSGGQAVVGLELNANHLRPAREG-KVRAI 83 (117)
T ss_pred EEEEEEcCHHHcCCcccChHHHHHHHHHHHHHHHHHhh-------------cCCCceEEEEEEEeeeccccCCC-EEEEE
Confidence 46778899999999999999999999887763222111 11244556779999999999999 99999
Q ss_pred EEEeecCCceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 219 TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
.++...++..+.-+-+|+|. +|++++++++++.
T Consensus 84 a~v~~~gr~~~~~~~~i~~~-~g~~va~~~~t~~ 116 (117)
T TIGR00369 84 AQVVHLGRQTGVAEIEIVDE-QGRLCALSRGTTA 116 (117)
T ss_pred EEEEecCceEEEEEEEEECC-CCCEEEEEEEEEc
Confidence 99999999888888999997 8999999998753
No 19
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=97.55 E-value=0.0004 Score=63.87 Aligned_cols=90 Identities=10% Similarity=0.007 Sum_probs=69.2
Q ss_pred eEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEE
Q 024540 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (266)
Q Consensus 138 vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V 217 (266)
.+...|.||++|+|.+||+||+.|..|+.|.-.-|...+- + -.|+.++|.++...||+|+|
T Consensus 152 s~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~~~~~---------------~----p~r~~l~y~keva~G~~iti 212 (250)
T COG3884 152 SEIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEFLKLY---------------G----PLRLTLEYVKEVAPGEKITI 212 (250)
T ss_pred cccccceeEEEeeccccccccceehHHHHHHHhhhhHhhc---------------c----cceeEEEEEcccCCCCeEEE
Confidence 3556899999999999999999999999998775554431 1 24788999999999999999
Q ss_pred EEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 218 ETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 218 ~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
.+...+.+... .... ||++.+-+-.+|=.
T Consensus 213 ~~e~~~~~s~~------~f~~-d~~v~~lt~i~~d~ 241 (250)
T COG3884 213 VYEVHPLESKH------QFTS-DGQVNALTYIVGDE 241 (250)
T ss_pred EEEEcccCcee------eecC-CcceEEEEEEEehh
Confidence 99988765521 2233 67777776666543
No 20
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=97.34 E-value=0.011 Score=46.80 Aligned_cols=97 Identities=14% Similarity=0.033 Sum_probs=78.3
Q ss_pred EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEE
Q 024540 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~ 218 (266)
-+-.+.++...++..|.++=..++-++..++...+ . . . ... =+-...+++|.||.+-||+|+++
T Consensus 16 ~~~~l~~~~~~~n~~g~~HGG~i~al~D~~~~~~~--~-~--------~---~~~--~~t~~~~i~f~rp~~~G~~l~~~ 79 (114)
T TIGR02286 16 ARVAMTVRADMLNGHGTAHGGFLFSLADSAFAYAC--N-S--------Y---GDA--AVAAQCTIDFLRPGRAGERLEAE 79 (114)
T ss_pred EEEEEECCHHHcCcCCCchHHHHHHHHHHHHHHHh--c-C--------C---CCc--eEEEEEEEEEecCCCCCCEEEEE
Confidence 34578899999999999999999999998764332 1 1 0 011 14578899999999999999999
Q ss_pred EEEeecCCceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 219 TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
.++...++....-+-+|+|. +|++++.++.+|-
T Consensus 80 a~v~~~g~~~~~~~~~i~~~-~~~~va~~~~t~~ 112 (114)
T TIGR02286 80 AVEVSRGGRTGTYDVEVVNQ-EGELVALFRGTSR 112 (114)
T ss_pred EEEEEeCCcEEEEEEEEEcC-CCCEEEEEEEEEE
Confidence 99999888777888889996 8999999998874
No 21
>PRK10694 acyl-CoA esterase; Provisional
Probab=97.05 E-value=0.021 Score=47.66 Aligned_cols=84 Identities=13% Similarity=0.009 Sum_probs=70.6
Q ss_pred EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEee-EEEEeecCCCCCEEEE
Q 024540 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRM-QVVVDRYPTWNDVVNV 217 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~-qI~~~R~P~~gD~V~V 217 (266)
....+.+.+.+++..|.+.=..+|.|+.+++.-.+.... +-..+..+. .|++.+|.+.||.|++
T Consensus 12 ~~~~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~~~~---------------~~~~vtv~vd~i~F~~Pv~~Gd~l~~ 76 (133)
T PRK10694 12 LVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIA---------------HGRVVTVRVEGMTFLRPVAVGDVVCC 76 (133)
T ss_pred eEEEEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHHHHc---------------CCceEEEEECceEECCCcccCcEEEE
Confidence 455678999999999999999999999998776553331 224677777 7799999999999999
Q ss_pred EEEEeecCCceEEEEEEEEE
Q 024540 218 ETWVSASGKNGMRRDWLIRN 237 (266)
Q Consensus 218 ~TWv~~~gk~~~~Rdf~I~D 237 (266)
++++...++.++.-+.+++.
T Consensus 77 ~a~V~~~g~sS~~v~v~v~~ 96 (133)
T PRK10694 77 YARCVKTGTTSISINIEVWV 96 (133)
T ss_pred EEEEEEccCceEEEEEEEEE
Confidence 99999999999988888874
No 22
>PRK10293 acyl-CoA esterase; Provisional
Probab=96.32 E-value=0.17 Score=42.29 Aligned_cols=101 Identities=8% Similarity=-0.131 Sum_probs=80.9
Q ss_pred eEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEE
Q 024540 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (266)
Q Consensus 138 vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V 217 (266)
.-+-++.|+...+.+.|.++=..++-++..++.-..... ...+...|=..++++|.||.+-| +|+.
T Consensus 35 ~~~~~~~v~~~~~n~~G~lHGGv~~tLaD~a~~~a~~~~-------------~~~~~~~vTiel~infl~p~~~g-~l~a 100 (136)
T PRK10293 35 TLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLC-------------TEGEQKVVGLEINANHVRSAREG-RVRG 100 (136)
T ss_pred EEEEEEEcCHHHcCCcCcccHHHHHHHHHHHHHHHHHhc-------------ccCCceEEEEEEEeEEecccCCc-eEEE
Confidence 356678888889999999999998888866543222111 12344667889999999999876 6999
Q ss_pred EEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 218 ETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 218 ~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
+-++...++.-+.-+-+|+|+ +|++++.++.++.+
T Consensus 101 ~a~vv~~Gr~~~~~~~~v~d~-~g~l~A~~~~t~~i 135 (136)
T PRK10293 101 VCKPLHLGSRHQVWQIEIFDE-KGRLCCSSRLTTAI 135 (136)
T ss_pred EEEEEecCCCEEEEEEEEEeC-CCCEEEEEEEEEEE
Confidence 999999999888889999998 89999999998865
No 23
>PRK11688 hypothetical protein; Provisional
Probab=96.12 E-value=0.2 Score=42.17 Aligned_cols=111 Identities=12% Similarity=0.034 Sum_probs=77.2
Q ss_pred EEEEEEeecCCcC--CCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEE-EEEeeEEEEeecCCCCCEE
Q 024540 139 FRQNFSIRSYEIG--ADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIW-VVTRMQVVVDRYPTWNDVV 215 (266)
Q Consensus 139 fe~~f~Ir~yE~D--~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~W-VVtR~qI~~~R~P~~gD~V 215 (266)
-+..+.++...++ +.|.++=..++-++..+..--+....... .-+..++-.+....+ +=..++++|.||.+ |+.|
T Consensus 39 ~~~~l~~~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~~~~~~-~~~~~~~~~~~~~~~~vTi~l~i~fl~p~~-g~~l 116 (154)
T PRK11688 39 VELSFKMQPELVGNIAQSILHGGVIASVLDVAGGLVCVGGILAR-HEDISEEELRQRLSRLGTIDLRVDYLRPGR-GERF 116 (154)
T ss_pred EEEEeeCCHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHhhcccc-cccccccccccccccceEEEEEEEeeccCC-CCeE
Confidence 4456778887786 57888888888888776654443322100 000000000112234 45699999999996 9999
Q ss_pred EEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 216 ~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
+++.++...++.-+.-+-+|+|. +|+++++++.+|.
T Consensus 117 ~a~a~v~~~g~r~~~~~~~i~~~-~g~lvA~a~~t~~ 152 (154)
T PRK11688 117 TATSSVLRAGNKVAVARMELHNE-QGVHIASGTATYL 152 (154)
T ss_pred EEEEEEEEccCCEEEEEEEEECC-CCCEEEEEEEEEE
Confidence 99999999988777788899997 8999999999875
No 24
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=96.01 E-value=0.084 Score=45.65 Aligned_cols=98 Identities=11% Similarity=0.037 Sum_probs=82.5
Q ss_pred EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEE
Q 024540 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~ 218 (266)
-+.+++|....|+..+.+.-...+.+.+..+..-+-.. +....-|-..++|.|..+++.||.|.|+
T Consensus 39 v~ce~kV~~~~~N~~k~LHGG~tAtLvD~i~s~~~~~~--------------~~~~~gvsvdLsvsyL~~AklGe~l~i~ 104 (148)
T KOG3328|consen 39 VSCELKVTPDHLNRFKTLHGGATATLVDLITSAALLMT--------------SGFKPGVSVDLSVSYLSSAKLGEELEIE 104 (148)
T ss_pred EEEEEEeCHHHcCccccccccchhhHHHHHhhHHHHhc--------------cCCCCceEEEEEhhhccccCCCCeEEEE
Confidence 46789999999999999999998888888776533222 2223447789999999999999999999
Q ss_pred EEEeecCCceEEEEEEEEECCCCcEEEEEEee
Q 024540 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 219 TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
..+...+|....-+-+++..+||++++++.-+
T Consensus 105 a~~vr~Gk~la~t~v~l~~K~t~kiia~grht 136 (148)
T KOG3328|consen 105 ATVVRVGKTLAFTDVELRRKSTGKIIAKGRHT 136 (148)
T ss_pred EEEeecCceEEEEEEEEEEcCCCeEEEecceE
Confidence 99999999999999999999889999987654
No 25
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=95.94 E-value=0.099 Score=41.10 Aligned_cols=55 Identities=13% Similarity=0.038 Sum_probs=46.3
Q ss_pred EEEEEeeEEEEeecCCCCCEEEEEEEEeecCC--ceEEEEEEEEECCCCcEEEEEEee
Q 024540 195 IWVVTRMQVVVDRYPTWNDVVNVETWVSASGK--NGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 195 ~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk--~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
..+....++++.+|...||+|+++.++...+. .....+.++++. +|+++++++.+
T Consensus 69 ~~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~~~~v~~~~~~~~~-~g~~v~~g~~~ 125 (128)
T cd03449 69 GTIYLSQSLRFLRPVFIGDTVTATVTVTEKREDKKRVTLETVCTNQ-NGEVVIEGEAV 125 (128)
T ss_pred eEEEEEEEEEECCCccCCCEEEEEEEEEEEecCCCEEEEEEEEEeC-CCCEEEEEEEE
Confidence 56677899999999999999999999987644 456677788886 79999999875
No 26
>PRK10254 thioesterase; Provisional
Probab=95.61 E-value=0.71 Score=38.81 Aligned_cols=118 Identities=8% Similarity=-0.028 Sum_probs=87.9
Q ss_pred CCccCCCCcCccccCCceEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEe
Q 024540 121 DMLVDPFGIGKIVQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTR 200 (266)
Q Consensus 121 ~~~~~~~~~~~~~~dg~vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR 200 (266)
+.+...+|+--.--+...-+-++.++...+.+.|.++=..++-+++.++.-...... ..+...+=+.
T Consensus 18 ~~~~~~LGi~i~ei~~g~~~~~l~v~~~~~n~~G~vHGGv~~tLaD~a~g~A~~~~~-------------~~g~~~vTie 84 (137)
T PRK10254 18 NTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFLMT-------------RDGQCVVGTE 84 (137)
T ss_pred cchHHhhCcEEEEEeCCEEEEEEEcCccccCCCCcchHHHHHHHHHHHHHHHHHhhC-------------CCCCeEEEEE
Confidence 334444555322222223566788888899999999999999888876554432221 2356789999
Q ss_pred eEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 201 MQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 201 ~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
++++|.||.+-| .|+.+..+...+|.-..-+-+|+|+ +|++++.++.+-.+
T Consensus 85 l~in~Lrp~~~g-~l~a~a~vi~~Gr~~~v~~~~v~d~-~g~l~a~~~~t~~i 135 (137)
T PRK10254 85 LNATHHRPVSEG-KVRGVCQPLHLGRQNQSWEIVVFDE-QGRRCCTCRLGTAV 135 (137)
T ss_pred EEeEEeccCcCC-eEEEEEEEEecCcCEEEEEEEEEcC-CCCEEEEEEEEEEE
Confidence 999999999866 7999999999999888889999997 89999999887543
No 27
>COG5496 Predicted thioesterase [General function prediction only]
Probab=95.47 E-value=0.76 Score=39.00 Aligned_cols=106 Identities=9% Similarity=0.088 Sum_probs=80.9
Q ss_pred cCCceEEEEEEeecCCcCCC-------CCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEe
Q 024540 134 QDGFIFRQNFSIRSYEIGAD-------GTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVD 206 (266)
Q Consensus 134 ~dg~vfe~~f~Ir~yE~D~~-------G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~ 206 (266)
.+|..++.+|.|+...+++- .-+--.-++.||++++.+-+... .++|.+=|-+...++=.
T Consensus 2 ~~g~~~e~~~lv~dn~t~~~~~~~~~~~VlATp~mi~~~E~a~~el~~~~-------------Ld~g~ttVG~ev~vrHl 68 (130)
T COG5496 2 MDGLTLEGEFLVRDNHTVPPAEGSGMLNVLATPAMIGFMENASYELLQPY-------------LDNGETTVGTEVLVRHL 68 (130)
T ss_pred CCceeeEEEEEecccccCchhHhCCccceeehHHHHHHHHHHHHHHHHhh-------------CcCCcceeeEEEEeeec
Confidence 57889999999998888831 22344567888999887655332 23577888888888888
Q ss_pred ecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehhH
Q 024540 207 RYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIFW 254 (266)
Q Consensus 207 R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVlv 254 (266)
.+.--|.+|+|.+.+...++.....+-+..+ +|+.+.+++-+=+.+
T Consensus 69 a~~~~G~~V~i~~~l~~v~Gr~v~f~i~a~~--~~~~Ig~g~h~R~iv 114 (130)
T COG5496 69 AATPPGLTVTIGARLEKVEGRKVKFRIIAME--GGDKIGEGTHTRVIV 114 (130)
T ss_pred cCCCCCCeEEEEEEEEEEeccEEEEEEEEee--CCcEEeeeEEEEEEe
Confidence 8999999999999999997777666565554 799999998775544
No 28
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=94.66 E-value=0.27 Score=36.86 Aligned_cols=57 Identities=12% Similarity=-0.009 Sum_probs=51.1
Q ss_pred eEEEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeee
Q 024540 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 194 l~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
..-+...+++.|.+++.-+|.++.+.++...++....++-+|++. +|++++.+....
T Consensus 41 ~~~~t~~~~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~-~G~lva~~~~~~ 97 (99)
T cd00556 41 SGFASLDHHIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQR-DGKLVASATQSF 97 (99)
T ss_pred CCeeeeEEEEEEcCCCCCCccEEEEEEecccCCCceEEEEEEECC-CCcEEEEEEEeE
Confidence 345778999999999999999999999999999999999999997 899999988764
No 29
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=93.94 E-value=0.37 Score=47.43 Aligned_cols=101 Identities=14% Similarity=0.163 Sum_probs=85.4
Q ss_pred cccCCceEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCC
Q 024540 132 IVQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTW 211 (266)
Q Consensus 132 ~~~dg~vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~ 211 (266)
|.+.+..|...++|.+.=++..|.+++..+-.++.++....++.. ++---++-.+.+-+.++...
T Consensus 326 l~e~~~~~~~t~~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~k~---------------~~~niiIE~i~iyflk~vqi 390 (432)
T COG4109 326 LSEKGDEYGVTVEVEPQMINSLGTISNGVFTELLTEVVQRVLRKK---------------KKRNIIIENITIYFLKPVQI 390 (432)
T ss_pred hhhhccccceEEEechhhccccccchHHHHHHHHHHHHHHHHHHh---------------cCCceEEEeeeeeeecceec
Confidence 455666677779999999999999999999999999887666433 23345778889999999999
Q ss_pred CCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEe
Q 024540 212 NDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATR 249 (266)
Q Consensus 212 gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS 249 (266)
.+.++|..++.+.+|.+..-|++|+. +|+++++|--
T Consensus 391 d~~l~I~prIl~~gR~~a~idvei~~--~~~ivaKAiv 426 (432)
T COG4109 391 DSVLEIYPRILEEGRKFAKIDVEIYH--DGQIVAKAIV 426 (432)
T ss_pred ccEEEEeeeeeccccccceeEEEEee--Ccchhhhhee
Confidence 99999999999999999999999997 5888887743
No 30
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.79 E-value=2 Score=35.37 Aligned_cols=101 Identities=12% Similarity=0.006 Sum_probs=81.8
Q ss_pred EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEE
Q 024540 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~ 218 (266)
-+..+.+......+.|.++=..++-++..++.-.+....-. ... =+=+.++++|.|+.+-|+ |+.+
T Consensus 36 ~~~~l~~~~~~~~~~G~~HGG~i~alaD~a~~~a~~~~~~~-----------~~~--~~ti~l~i~flr~~~~g~-v~a~ 101 (141)
T COG2050 36 AEATLPVDPELLNPGGILHGGVIAALADSAAGLAANSLLGV-----------VAL--AVTLELNINFLRPVKEGD-VTAE 101 (141)
T ss_pred EEEEeecCHHHcCCCceeeHHHHHHHHHHHHHHHHhhccCc-----------cce--eEEEEEEehhccCCCCCe-EEEE
Confidence 45667788888889999999999999998887766555321 011 177889999999999999 9999
Q ss_pred EEEeecCCceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 219 TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
..+...++.-...+.++++...|+++++++.++..
T Consensus 102 a~v~~~G~~~~v~~i~v~~~~~~~lva~~~~t~~v 136 (141)
T COG2050 102 ARVLHLGRRVAVVEIEVKNDEGGRLVAKGTGTYAV 136 (141)
T ss_pred EEEEeeCCEEEEEEEEEEECCCCeEEEEEEEEEEE
Confidence 99999999888899999965366999999988764
No 31
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=93.50 E-value=0.73 Score=36.82 Aligned_cols=54 Identities=15% Similarity=0.096 Sum_probs=43.8
Q ss_pred EEEEeeEEEEeecCCCCCEEEEEEEEeecCCc-eEEEEEEEEECCCCcEEEEEEee
Q 024540 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKN-GMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 196 WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~-~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
..+.++++++.+|...||+|+++.++.+.+.- ....+.+++|. +|+++.+++..
T Consensus 67 ~~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~~~~v~~~~~~~nq-~G~~v~~g~a~ 121 (123)
T cd03455 67 ARVKSFAFRLGAPLYAGDTLRFGGRVTAKRDDEVVTVELWARNS-EGDHVMAGTAT 121 (123)
T ss_pred ceEEEEEEEeeccccCCCEEEEEEEEEeeccCcEEEEEEEEEcC-CCCEEEeEEEE
Confidence 44567799999999999999999999875332 56677888987 89998888765
No 32
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=93.50 E-value=3.2 Score=36.20 Aligned_cols=85 Identities=12% Similarity=0.030 Sum_probs=68.7
Q ss_pred EEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEE
Q 024540 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (266)
Q Consensus 140 e~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~T 219 (266)
...+.+-+.|++++|.+.=..+|.||.++|.--+.... .+..=-+.==+|.+.+|.+.||.|.+.+
T Consensus 15 ~~~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~~~a--------------~~~vVTasvd~v~F~~Pv~vGd~v~~~a 80 (157)
T COG1607 15 VLRTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAASRHA--------------GGRVVTASVDSVDFKKPVRVGDIVCLYA 80 (157)
T ss_pred EEEEEecCCccCcccccccHHHHHHHHHHHHHHHHHHh--------------CCeEEEEEeceEEEccccccCcEEEEEE
Confidence 47788999999999999999999999999887664431 2322223334688999999999999999
Q ss_pred EEeecCCceEEEEEEEEEC
Q 024540 220 WVSASGKNGMRRDWLIRNA 238 (266)
Q Consensus 220 Wv~~~gk~~~~Rdf~I~D~ 238 (266)
|+...|+.++.-.-+++.+
T Consensus 81 ~v~~~GrTSm~V~Vev~~~ 99 (157)
T COG1607 81 RVVYTGRTSMEVGVEVWAE 99 (157)
T ss_pred EEeecCcccEEEEEEEEEe
Confidence 9999999998887777653
No 33
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=93.42 E-value=0.91 Score=35.33 Aligned_cols=56 Identities=16% Similarity=-0.095 Sum_probs=46.3
Q ss_pred eEEEEEeeEEEEeecCCCCCEEEEEEEEeecCC----ceEEEEEEEEECCCCcEEEEEEee
Q 024540 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGK----NGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 194 l~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk----~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
..+++...++++.+|...||+|+++.++..... .......+++|. +|+++..++..
T Consensus 66 ~~~~~~~~~~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~~n~-~g~~v~~g~~~ 125 (127)
T cd03441 66 DGANLGSQSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEARNQ-GGEVVLSGEAT 125 (127)
T ss_pred ccceeEEeEEEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEEEeC-CCCEEEEEEEE
Confidence 467888999999999999999999999998643 356777888887 78988876653
No 34
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=93.11 E-value=2 Score=33.95 Aligned_cols=80 Identities=9% Similarity=-0.080 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCC
Q 024540 161 LMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKT 240 (266)
Q Consensus 161 lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~d 240 (266)
++.+|-+++..+....+. . ...+..+.+.--++++.++..-||+|+++.++...+.....-+.+++. +
T Consensus 50 ~iE~~aQ~~~~~~~~~~~---------~-~~~~~~~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~~~~~~~~~~~~--~ 117 (131)
T cd01288 50 IIEALAQAAGILGLKSLE---------D-FEGKLVYFAGIDKARFRKPVVPGDQLILEVELLKLRRGIGKFKGKAYV--D 117 (131)
T ss_pred HHHHHHHHHHHHhhhccc---------c-cCCcEEEEeeecccEEccccCCCCEEEEEEEEEEeeCCEEEEEEEEEE--C
Confidence 455666666655432221 1 123445555568999999999999999999999877666666677764 6
Q ss_pred CcEEEEEEeeeh
Q 024540 241 GETLTRATRWGI 252 (266)
Q Consensus 241 GeiLarAtS~WV 252 (266)
|+++++++-..+
T Consensus 118 g~~v~~~~~~~~ 129 (131)
T cd01288 118 GKLVAEAELMFA 129 (131)
T ss_pred CEEEEEEEEEEE
Confidence 999999886644
No 35
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=93.06 E-value=3.5 Score=32.33 Aligned_cols=85 Identities=12% Similarity=-0.037 Sum_probs=62.2
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEE
Q 024540 154 GTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDW 233 (266)
Q Consensus 154 G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf 233 (266)
+.+--.-++.++-+++..++...+... . ........+.--++++.++..-||+++++.++...+.....-+.
T Consensus 42 p~lPg~~~iE~~aQ~~~~~~~~~~~~~-------~-~~~~~~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~~~~~~~~ 113 (131)
T cd00493 42 PVMPGVLGIEAMAQAAAALAGLLGLGK-------G-NPPRLGYLAGVRKVKFRGPVLPGDTLTLEVELLKVRRGLGKFDG 113 (131)
T ss_pred CCCCcHHHHHHHHHHHHHHHHhccccc-------c-cCCcEEEEEEcceeEECCCcCCCCEEEEEEEEEEeeCCEEEEEE
Confidence 445666777888888888876554310 0 12333444444689999999999999999999988765677778
Q ss_pred EEEECCCCcEEEEEE
Q 024540 234 LIRNAKTGETLTRAT 248 (266)
Q Consensus 234 ~I~D~~dGeiLarAt 248 (266)
.++. +|+++++++
T Consensus 114 ~~~~--~g~~v~~~~ 126 (131)
T cd00493 114 RAYV--DGKLVAEAE 126 (131)
T ss_pred EEEE--CCEEEEEEE
Confidence 8887 599999988
No 36
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=91.86 E-value=1.7 Score=35.53 Aligned_cols=54 Identities=19% Similarity=0.003 Sum_probs=42.6
Q ss_pred EEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEee
Q 024540 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 197 VVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
.+.++++++.+|...||+|+++.|+.+...-...-++++++.++|+++.+++..
T Consensus 69 ~~~~~~~rf~~PV~~gdtl~~~~~v~~~~~~~~~~~~~~~nq~~g~~V~~g~~~ 122 (126)
T cd03447 69 RVRSFTASFVGMVLPNDELEVRLEHVGMVDGRKVIKVEARNEETGELVLRGEAE 122 (126)
T ss_pred eEEEEEEEEcccCcCCCEEEEEEEEEEEeCCeEEEEEEEEECCCCCEEEEEEEE
Confidence 335579999999999999999999988654456678889987338988877754
No 37
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=91.83 E-value=3.9 Score=33.66 Aligned_cols=98 Identities=13% Similarity=0.026 Sum_probs=66.6
Q ss_pred eEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEE
Q 024540 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (266)
Q Consensus 138 vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V 217 (266)
..+.....+..--+..|.+.-..+....+-++.-.+...- ..++.|++..++|+|.|+.+ ..|+.
T Consensus 30 ~~~v~l~~~~~~~N~~gt~h~gAl~~laE~~~g~~~~~~l-------------~~~~~~~~k~~~i~f~kpa~--g~v~a 94 (132)
T PF14539_consen 30 RVVVRLPLRPRNRNHVGTIHAGALFTLAEPAYGLLLMSNL-------------GDKYRVWDKSAEIDFLKPAR--GDVTA 94 (132)
T ss_dssp EEEEEE-S-CCGB-TTSSB-HHHHHHHHHCHHHHHHHHHS--------------TTEEEEEEEEEEEE-S-----S-EEE
T ss_pred EEEEEEcCCccccCcCcchHHHHHHHHHHHHHHHHHHHhC-------------CCcEEEEEEeeEEEEEeccC--CcEEE
Confidence 3456677778899999999999999999988776664431 13889999999999999976 44555
Q ss_pred EEEEee--cC-CceEEEEEEEEECCCCcEEEEEEeee
Q 024540 218 ETWVSA--SG-KNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 218 ~TWv~~--~g-k~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
+..+.. .+ +....-+-.|+|. +|++++++.-.|
T Consensus 95 ~~~~~~e~~~~~~~~~~~v~i~D~-~G~~Va~~~~t~ 130 (132)
T PF14539_consen 95 TAELTEEQIGERGELTVPVEITDA-DGEVVAEATITW 130 (132)
T ss_dssp EEE-TCCHCCHEEEEEEEEEEEET-TC-EEEEEEEEE
T ss_pred EEEcCHHHhCCCcEEEEEEEEEEC-CCCEEEEEEEEE
Confidence 555554 22 4556677889997 999999999888
No 38
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=91.16 E-value=1.8 Score=34.85 Aligned_cols=52 Identities=12% Similarity=0.078 Sum_probs=41.3
Q ss_pred EEeeEEEEeecCCCCCEEEEEEEEeec----CCceEEEEEEEEECCCCcEEEEEEee
Q 024540 198 VTRMQVVVDRYPTWNDVVNVETWVSAS----GKNGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 198 VtR~qI~~~R~P~~gD~V~V~TWv~~~----gk~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
+.++++++.+|...||+|+++.++.+. ++-...-+.+++|. +|+++..++..
T Consensus 70 i~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~~nq-~g~~v~~g~a~ 125 (127)
T cd03453 70 VVSFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDATDQ-AGGKKVLGRAI 125 (127)
T ss_pred eEEEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEEEEc-CCCEEEEEEEE
Confidence 357789999999999999999999753 22346677888997 89988887754
No 39
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=91.01 E-value=1.5 Score=35.34 Aligned_cols=51 Identities=14% Similarity=0.034 Sum_probs=40.3
Q ss_pred eEEEEeecCCCCCEEEEEEEEeecCC------ceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 201 MQVVVDRYPTWNDVVNVETWVSASGK------NGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 201 ~qI~~~R~P~~gD~V~V~TWv~~~gk------~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
.++++.+|...||+|+++.++...+. -...-..+++|. +|++++++..+.+
T Consensus 83 ~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~nq-~g~~v~~~~~~~l 139 (140)
T cd03446 83 DNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVNQ-RGEVVQSGEMSLL 139 (140)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEcC-CCCEEEEEEEeee
Confidence 38899999999999999999986531 235556777886 8999999887643
No 40
>PLN02322 acyl-CoA thioesterase
Probab=90.94 E-value=9.7 Score=32.86 Aligned_cols=101 Identities=7% Similarity=-0.125 Sum_probs=76.3
Q ss_pred EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEE
Q 024540 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~ 218 (266)
.+-+..|+...+++.|.++=..++-++.-++. ..-... ..+...|=+.++++|.||.+.||.|+.+
T Consensus 28 ~~~~m~v~~~~~N~~G~vHGGv~atLaDta~g-~A~~~~-------------~~~~~~vTiel~infLrpa~~G~~L~Ae 93 (154)
T PLN02322 28 VTGRLPVSPMCCQPFKVLHGGVSALIAESLAS-LGAHMA-------------SGFKRVAGIQLSINHLKSADLGDLVFAE 93 (154)
T ss_pred EEEEEECCHHHcCCCCCccHHHHHHHHHHHHH-HHHhhc-------------cCCCceEEEEEEEEEeccCCCCCEEEEE
Confidence 45667788888999999998888888865433 221111 1122457799999999999999999999
Q ss_pred EEEeecCCceEEEEEEEEECC-----CCcEEEEEEeeehh
Q 024540 219 TWVSASGKNGMRRDWLIRNAK-----TGETLTRATRWGIF 253 (266)
Q Consensus 219 TWv~~~gk~~~~Rdf~I~D~~-----dGeiLarAtS~WVl 253 (266)
-++...++.-..-+-+|+|.. +|++++.++.+-..
T Consensus 94 a~vv~~Gr~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~ 133 (154)
T PLN02322 94 ATPVSTGKTIQVWEVKLWKTTDKDKANKILISSSRVTLIC 133 (154)
T ss_pred EEEEecCCCEEEEEEEEEECCCCcccCCeEEEEEEEEEEE
Confidence 999999998888888899841 26788888876543
No 41
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=90.93 E-value=1.2 Score=36.07 Aligned_cols=50 Identities=16% Similarity=-0.043 Sum_probs=40.9
Q ss_pred eEEEEeecCCCCCEEEEEEEEeecC-------CceEEEEEEEEECCCCcEEEEEEeee
Q 024540 201 MQVVVDRYPTWNDVVNVETWVSASG-------KNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 201 ~qI~~~R~P~~gD~V~V~TWv~~~g-------k~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
.++++.+|...||+|+++.++.+.. +-...-...++|. +|+++++++.+.
T Consensus 81 ~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq-~g~~v~~~~~~~ 137 (140)
T cd03454 81 DELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLNQ-RGEVVLTFEATV 137 (140)
T ss_pred eeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEcC-CCCEEEEEEehh
Confidence 4899999999999999999998652 2246777888887 899999988753
No 42
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=89.81 E-value=2.7 Score=36.29 Aligned_cols=55 Identities=13% Similarity=0.006 Sum_probs=43.7
Q ss_pred EEEeeEEEEeecCCCCCEEEEEEEEeecC----CceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 197 VVTRMQVVVDRYPTWNDVVNVETWVSASG----KNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 197 VVtR~qI~~~R~P~~gD~V~V~TWv~~~g----k~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
+-...++++.||.+.||+|+++.++.... +-...-..+++|. +|+++++++.+.+
T Consensus 85 v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~NQ-~Ge~V~~~~~~~~ 143 (166)
T PRK13691 85 VQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVCTND-DGELVMEAYTTLM 143 (166)
T ss_pred eeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEECC-CCCEEEEEEEEEE
Confidence 44557888999999999999999988652 2246677888887 8999999988754
No 43
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=89.72 E-value=2.8 Score=35.89 Aligned_cols=54 Identities=9% Similarity=0.087 Sum_probs=42.8
Q ss_pred EeeEEEEeecCCCCCEEEEEEEEeec----CCceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 199 TRMQVVVDRYPTWNDVVNVETWVSAS----GKNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 199 tR~qI~~~R~P~~gD~V~V~TWv~~~----gk~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
...++++.+|.+.||+|+++.++... ++-....+.+++|. +|+++.++++..++
T Consensus 87 ~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~Nq-~Ge~V~~~~~~~~~ 144 (159)
T PRK13692 87 VDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTNE-EGDVVQETYTTLAG 144 (159)
T ss_pred eeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEEcC-CCCEEEEEEEEEEE
Confidence 34788999999999999999999754 22347777888986 89999999887543
No 44
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=89.42 E-value=1.5 Score=35.15 Aligned_cols=52 Identities=12% Similarity=0.011 Sum_probs=38.2
Q ss_pred eEEEEEeeEEEEeecCCCCCEEEEEEEEeec--C-----CceEEEEEEEEECCCCcEEEE
Q 024540 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSAS--G-----KNGMRRDWLIRNAKTGETLTR 246 (266)
Q Consensus 194 l~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~--g-----k~~~~Rdf~I~D~~dGeiLar 246 (266)
..-|-...++++++|++-||+|++++.+... + ......+.+++|. +|+++++
T Consensus 73 ~~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~~-~Ge~v~t 131 (132)
T PF13452_consen 73 TRLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEYTDQ-DGELVAT 131 (132)
T ss_dssp GGEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE-C-TTEEEEE
T ss_pred hhEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEEECC-CCCEEEe
Confidence 3455567999999999999999999999874 1 2225667888987 8999875
No 45
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=89.38 E-value=1.7 Score=35.22 Aligned_cols=50 Identities=16% Similarity=0.007 Sum_probs=39.8
Q ss_pred eEEEEeecCCCCCEEEEEEEEeecCC-------ceEEEEEEEEECCCCcEEEEEEeee
Q 024540 201 MQVVVDRYPTWNDVVNVETWVSASGK-------NGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 201 ~qI~~~R~P~~gD~V~V~TWv~~~gk-------~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
.++++.+|...||+|+++.++..... ....-..+++|. +|+++++++.+.
T Consensus 84 ~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq-~g~~V~~~~~~~ 140 (146)
T cd03451 84 DEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYNQ-DGEPVLSFERTA 140 (146)
T ss_pred cEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEECC-CCCEEEEEEehh
Confidence 48999999999999999999987532 245556677776 899999998764
No 46
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=87.41 E-value=15 Score=30.16 Aligned_cols=101 Identities=9% Similarity=-0.040 Sum_probs=63.5
Q ss_pred eEEEEEEeecCCcCCCCC------cCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEee-EEEEeecCC
Q 024540 138 IFRQNFSIRSYEIGADGT------ASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRM-QVVVDRYPT 210 (266)
Q Consensus 138 vfe~~f~Ir~yE~D~~G~------ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~-qI~~~R~P~ 210 (266)
..+-.+.|...+.=..|| +--.-++.+|-+++.-+.-... . ..+...++... ++++.++..
T Consensus 36 ~~~~~~~v~~d~~~~~ghfp~~pi~PG~l~iE~~aQ~~~~~~~~~~----------~--~~~~~~~l~gi~~~kF~~pv~ 103 (147)
T PRK00006 36 SIVAIKNVTINEPFFQGHFPGYPVMPGVLIIEAMAQAAGVLALKSE----------E--NKGKLVYFAGIDKARFKRPVV 103 (147)
T ss_pred EEEEEEEecCCCccccCCCcCCCcCchhHHHHHHHHHHHHHHhcCc----------C--cCCcEEEEeeeeEEEEccccC
Confidence 344455565544434444 3333355666665554331111 0 12334445554 799999999
Q ss_pred CCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 211 WNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 211 ~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
-||+|+++.++...++....-+.+++. +|+++++++...+
T Consensus 104 pGd~l~i~~~i~~~~~~~v~~~~~~~~--~g~~v~~~~~~~~ 143 (147)
T PRK00006 104 PGDQLILEVELLKQRRGIWKFKGVATV--DGKLVAEAELMFA 143 (147)
T ss_pred CCCEEEEEEEEEEeeCCEEEEEEEEEE--CCEEEEEEEEEEE
Confidence 999999999999876656666777764 7999999987754
No 47
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=86.22 E-value=5.5 Score=32.85 Aligned_cols=49 Identities=14% Similarity=-0.000 Sum_probs=40.1
Q ss_pred eEEEEeecCCCCCEEEEEEEEeecC--C----ceEEEEEEEEECCCCcEEEEEEee
Q 024540 201 MQVVVDRYPTWNDVVNVETWVSASG--K----NGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 201 ~qI~~~R~P~~gD~V~V~TWv~~~g--k----~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
.++++.+|...||+|+++..+.... + ..+..+.+++|. +|+++.+++..
T Consensus 81 ~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~nq-~g~~V~~~~~~ 135 (142)
T cd03452 81 ENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTNQ-NGELVASYDIL 135 (142)
T ss_pred ceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEec-CCCEEEEEEeh
Confidence 3899999999999999999998752 1 246677888887 89999998854
No 48
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=85.53 E-value=6.4 Score=39.26 Aligned_cols=57 Identities=19% Similarity=0.063 Sum_probs=44.9
Q ss_pred EEEEeeEEEEeecCCCCCEEEEEEEEeec--CCceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 196 WVVTRMQVVVDRYPTWNDVVNVETWVSAS--GKNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 196 WVVtR~qI~~~R~P~~gD~V~V~TWv~~~--gk~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
-+....++++.+|.+.||+|+++.++.+. ++....-..+++|. +|+++..++.+.++
T Consensus 83 ~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~v~~~~~~~nq-~G~~V~~g~~~~l~ 141 (466)
T PRK08190 83 TIYLGQSLRFRRPVRIGDTLTVTVTVREKDPEKRIVVLDCRCTNQ-DGEVVITGTAEVIA 141 (466)
T ss_pred eEEEEEEEEEeCCcCCCCEEEEEEEEEEEECCCCEEEEEEEEEeC-CCCEEEEEEEEeec
Confidence 45567899999999999999999999764 33345566777886 89999998887543
No 49
>PLN02864 enoyl-CoA hydratase
Probab=85.20 E-value=3.9 Score=38.72 Aligned_cols=57 Identities=11% Similarity=0.055 Sum_probs=45.6
Q ss_pred EEEeeEEEEeecCCCCCEEEEEEEEeecCCce----EEEEEEEEECCCCcEEEEEEeeehh
Q 024540 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNG----MRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 197 VVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~----~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
|=.+..|+++||...++.+++++++......+ ..-+..++|..+|+++++..++.++
T Consensus 95 VHgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~ 155 (310)
T PLN02864 95 LHGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKDSGELLCMNRSTIFL 155 (310)
T ss_pred eeccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEE
Confidence 34578899999999999999999999762222 5677888885589999998887654
No 50
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=85.14 E-value=7.1 Score=34.50 Aligned_cols=54 Identities=17% Similarity=0.021 Sum_probs=47.6
Q ss_pred EEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 196 WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
..+.++++.|.++...+ .+++++.....+|....|.-+++. +|+++++|+.+..
T Consensus 34 ~~~~s~~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~q--~~~~~~~a~~~f~ 87 (255)
T PF13622_consen 34 FDPHSLHVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELSQ--DGKVVATATASFG 87 (255)
T ss_dssp SEEEEEEEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEEE--TTEEEEEEEEEEE
T ss_pred CceEEEEeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEEE--CCcCEEEEEEEEc
Confidence 78999999999999999 999999999999999999999997 5889999988753
No 51
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=84.37 E-value=20 Score=28.99 Aligned_cols=121 Identities=12% Similarity=-0.032 Sum_probs=71.6
Q ss_pred ccCCCCCc-cCCC-CcCccccCCceEEEEEEeecCCcCCCCC------cCHHHHHHHHHHHHHHHHHH-cCCCCcCCCCc
Q 024540 116 KPRRSDML-VDPF-GIGKIVQDGFIFRQNFSIRSYEIGADGT------ASIETLMNHLQETALNHVMT-AGLLDAGFGAT 186 (266)
Q Consensus 116 ~~~~~~~~-~~~~-~~~~~~~dg~vfe~~f~Ir~yE~D~~G~------ls~~~lmn~lQEaA~~H~~s-lGl~~dgFG~t 186 (266)
-|-|+.|+ +|.. ... .+...+-...|+..+.=..|| +--.-++.+|-+++..++-. .+.
T Consensus 9 lPhr~P~l~vD~i~~~~----~~~~~~~~~~v~~~~~~f~gHFp~~pv~Pg~l~iE~~aQ~~~~~~~~~~~~-------- 76 (140)
T TIGR01750 9 LPHRYPFLLVDRILELD----PGKRIVAIKNVTINEPFFQGHFPEKPIMPGVLIVEALAQAGGVLAILSLGG-------- 76 (140)
T ss_pred CCCCCCeeeEEEEEEEc----CCCEEEEEEEcCCCCCeecCCCcCcCcChHHHHHHHHHHHHHHHheccccc--------
Confidence 34455554 6653 221 122334445555444333444 33344667777766654421 110
Q ss_pred HHHhhCCeEEEEEe-eEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 187 PAMAKKNLIWVVTR-MQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 187 ~em~k~Gl~WVVtR-~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
-...+-..++.+ -++++.++..-||+|+++.++...+.....-+..++. +|+++++|+-..+
T Consensus 77 --~~~~~~~~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~~~~~~~~~~~~~~--~g~~va~~~~~~~ 139 (140)
T TIGR01750 77 --EIGKGKLVYFAGIDKAKFRRPVVPGDQLILHAEFLKKRRKIGKFKGEATV--DGKVVAEAEITFA 139 (140)
T ss_pred --cCCCCcEEEEeecceeEECCccCCCCEEEEEEEEEEccCCEEEEEEEEEE--CCEEEEEEEEEEE
Confidence 001222344555 5999999999999999999999776655666777764 7999999987643
No 52
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=84.35 E-value=12 Score=32.81 Aligned_cols=57 Identities=11% Similarity=-0.095 Sum_probs=43.5
Q ss_pred CeEEEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeee
Q 024540 193 NLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 193 Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
+..-+..-.+++|.+|...||+|+++..+...++....-+-.++. +|+++++|.-..
T Consensus 123 ~~~~~~~i~~irF~kPV~pGD~L~~ea~v~~~~~~~~~v~~~~~v--~g~~V~ege~~~ 179 (185)
T PRK04424 123 AELALTGVANIRFKRPVKLGERVVAKAEVVRKKGNKYIVEVKSYV--GDELVFRGKFIM 179 (185)
T ss_pred CcEEEEEeeeEEEccCCCCCCEEEEEEEEEEccCCEEEEEEEEEE--CCEEEEEEEEEE
Confidence 334445557999999999999999999999877654545555553 799998888664
No 53
>PLN02647 acyl-CoA thioesterase
Probab=83.50 E-value=34 Score=34.38 Aligned_cols=88 Identities=14% Similarity=0.105 Sum_probs=64.8
Q ss_pred EeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEee-EEEEeecCCCCCEEEEEEEEe
Q 024540 144 SIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRM-QVVVDRYPTWNDVVNVETWVS 222 (266)
Q Consensus 144 ~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~-qI~~~R~P~~gD~V~V~TWv~ 222 (266)
.++...++..|++....+|.+|.++|..-+...--..| .....+.-|-... +|++.+|.+.||.|+|...+.
T Consensus 99 ~l~~~y~N~~G~l~gG~LLe~mD~~A~~~A~rh~~~~~-------~~~~p~~vVTAsVD~i~F~~Pi~~g~~v~l~g~Vt 171 (437)
T PLN02647 99 ILREQYRNPWNEVRIGKLLEDLDALAGTISVKHCSDDD-------STTRPLLLVTASVDKIVLKKPIRVDVDLKIVGAVT 171 (437)
T ss_pred hhchhhcCCCCcEeHhHHHHHHHHHHHHHHHHHhCCCc-------ccCCcceEEEEEECcEEEcCCCcCCcEEEEEEEEE
Confidence 56666699999999999999999987765543321101 1112333343333 578899999999999999999
Q ss_pred ecCCceEEEEEEEEEC
Q 024540 223 ASGKNGMRRDWLIRNA 238 (266)
Q Consensus 223 ~~gk~~~~Rdf~I~D~ 238 (266)
..|+.+|.-.-++..+
T Consensus 172 ~vGrSSMEV~v~V~~~ 187 (437)
T PLN02647 172 WVGRSSMEIQLEVIQP 187 (437)
T ss_pred EecCCeEEEEEEEEEc
Confidence 9999999888888754
No 54
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=80.71 E-value=17 Score=28.22 Aligned_cols=53 Identities=15% Similarity=-0.001 Sum_probs=46.8
Q ss_pred EEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeee
Q 024540 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 197 VVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
.+..+++.+.+++..+..|++++.....+|....|.-.... +|+++..++..+
T Consensus 40 ~~~s~~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~Q--~g~~~~~a~~sf 92 (94)
T cd03445 40 VPHSLHSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAVQ--NGKVIFTATASF 92 (94)
T ss_pred CeEEEEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEEE--CCEEEEEEEEEE
Confidence 36789999999999999999999999999999999999986 599888887653
No 55
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=70.21 E-value=57 Score=26.45 Aligned_cols=102 Identities=16% Similarity=0.063 Sum_probs=63.4
Q ss_pred EEEEEEeecCCcCCCCC------cCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCC
Q 024540 139 FRQNFSIRSYEIGADGT------ASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWN 212 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~------ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~g 212 (266)
-+-.+.|...|--..|| +--.-++..+-+++...+...+... +.+ ..+.......--++++.++..-|
T Consensus 27 ~~a~~~v~~~~~~f~gHFp~~Pv~PGvl~iE~~aQ~~~~~~~~~~~~~-~~~-----~~~~~~~l~~~~~~kF~~~v~Pg 100 (138)
T PF07977_consen 27 IVARKNVTPDEPFFDGHFPGDPVMPGVLLIEAMAQAAGFLAGYSGLAE-GTG-----EARKVPFLAGIRNVKFRGPVYPG 100 (138)
T ss_dssp EEEEEEE-TTSGGGGCSTTTS--B-HHHHHHHHHHHHHHHHHHHCCSS-SCC-----CCCEEEEEEEEEEEEE-S-B-TT
T ss_pred EEEEEEeCCCCCEEEcCCCCCCCCCeEhHHHHHHHHHHhHhhhccccc-cCC-----CcceEEEeccccEEEECccEeCC
Confidence 44455555544433333 2223355677777776666554310 000 01134566778889999999999
Q ss_pred C-EEEEEEEEee---cCCceEEEEEEEEECCCCcEEEEEE
Q 024540 213 D-VVNVETWVSA---SGKNGMRRDWLIRNAKTGETLTRAT 248 (266)
Q Consensus 213 D-~V~V~TWv~~---~gk~~~~Rdf~I~D~~dGeiLarAt 248 (266)
| +++++..+.. .+...+.-+..++- +|+.+++|.
T Consensus 101 ~~~l~~~v~i~~~~~~~~~~~~~~~~~~v--dg~~v~~~~ 138 (138)
T PF07977_consen 101 DKTLRIEVEIKKIRRREGGMAIFDGTAYV--DGELVAEAE 138 (138)
T ss_dssp E-EEEEEEEEEEEEEEETTEEEEEEEEEE--TTEEEEEEE
T ss_pred CcEEEEEEEEEEeecccCCEEEEEEEEEE--CCEEEEEEC
Confidence 9 9999999998 67777888888886 799999874
No 56
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=68.20 E-value=68 Score=26.51 Aligned_cols=97 Identities=13% Similarity=0.052 Sum_probs=66.8
Q ss_pred eEEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHH----HHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCC
Q 024540 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALN----HVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWND 213 (266)
Q Consensus 138 vfe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~----H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD 213 (266)
.-+-...++. +.+..|.+.=..++..+..++.- ++...+ .+..-|....+|+|.+|.+ ++
T Consensus 23 ~~~v~~pl~~-n~N~~G~~hGG~l~tlad~a~~~~~~~~~~~~~--------------~~~~~vt~~~~i~yl~P~~-~~ 86 (138)
T TIGR02447 23 ELRLSAPLAA-NINHHGTMFGGSLYTLATLSGWGLLWLRLQELG--------------IDGDIVIADSHIRYLAPVT-GD 86 (138)
T ss_pred EEEEEeECCC-CcCCCCceehhHHHHHHHHHHHHHHHHHHHHhC--------------CCCcEEEEEeeeEEcCCcC-CC
Confidence 3445566776 58999999999999999544321 122222 1234577899999999886 44
Q ss_pred EEEEEEEE-------------eecCCceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 214 VVNVETWV-------------SASGKNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 214 ~V~V~TWv-------------~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
+.++..+ ...+|....-+-+|+| +|+++++++.+++.
T Consensus 87 -~~a~~~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~--~~~lvA~~~g~~~~ 136 (138)
T TIGR02447 87 -PVANCEAPDLESWEAFLATLQRGGKARVKLEAQISS--DGKLAATFSGEYVA 136 (138)
T ss_pred -eEEEEEcCCHHHHHHHHHHHHhCCceEEEEEEEEEE--CCEEEEEEEEEEEE
Confidence 6656555 3446666677888886 68999999988764
No 57
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=67.50 E-value=41 Score=26.46 Aligned_cols=55 Identities=13% Similarity=-0.021 Sum_probs=45.8
Q ss_pred EEEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEee
Q 024540 195 IWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 195 ~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
.-.-..+.|.+.+++...|.+..+.+....+.-+..-+=+|+|. +|+++|...-.
T Consensus 47 ~~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~~-~G~LvAs~~Q~ 101 (104)
T cd03444 47 ASASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFTR-DGELVASVAQE 101 (104)
T ss_pred ceEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEECC-CCCEEEEEEEe
Confidence 44667888999999999999999999998877677777789998 89999977654
No 58
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=61.41 E-value=41 Score=30.25 Aligned_cols=52 Identities=10% Similarity=-0.058 Sum_probs=46.5
Q ss_pred EEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeee
Q 024540 198 VTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 198 VtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
+..+|+.+.+++..+..|++++.....||..+.|.-+.+. +|+++..++...
T Consensus 46 ~~S~h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~Q--~g~~~~~a~asf 97 (271)
T TIGR00189 46 PHSLHSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAVQ--HGKTIFTLQASF 97 (271)
T ss_pred cceeEEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEEE--CCEEEEEEEEEc
Confidence 4589999999999999999999999999999999999986 689998887664
No 59
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=58.68 E-value=5.1 Score=36.38 Aligned_cols=104 Identities=12% Similarity=-0.048 Sum_probs=78.2
Q ss_pred EEeecCCcCCCC-CcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEEEE
Q 024540 143 FSIRSYEIGADG-TASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWV 221 (266)
Q Consensus 143 f~Ir~yE~D~~G-~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv 221 (266)
...-+.|.|-.= |.||+.|++=+.=++.+|....|+- ..+...+..-|..--.++|.|..+.-+.-.|.|++
T Consensus 55 g~cls~dlDtll~HmnNArYfrElDfAR~~~~~r~~l~-------~~lr~~~~~~v~~As~~ryrr~Irpfh~y~v~sRi 127 (213)
T KOG4366|consen 55 GLCLSTDLDTLLSHMNNARYFRELDFARVNFYCRTGLY-------LMLRSKRGPYVQGASVFRYRREIRPFHPYSVSSRI 127 (213)
T ss_pred ceeecchHHHHHHHhhhhHHHHHhhHHHHHHHHHHhHH-------HHHHhcCCCeeechhhhhhhhhcCCCCccceeeEE
Confidence 334445555544 9999999999999999999999861 33455677777777788899999999999999999
Q ss_pred eecC--CceEEEEEEEEECCCCcEEEEEEeeehhHH
Q 024540 222 SASG--KNGMRRDWLIRNAKTGETLTRATRWGIFWL 255 (266)
Q Consensus 222 ~~~g--k~~~~Rdf~I~D~~dGeiLarAtS~WVlv~ 255 (266)
.... .+++.-.|.+. +||-+++-+.+..++..
T Consensus 128 I~WDekaiyle~rFv~~--sd~fvcala~~kq~l~d 161 (213)
T KOG4366|consen 128 ICWDEKAIYLESRFVIL--SDGFVCALALTKQVLKD 161 (213)
T ss_pred EEEchhhhhhhhheeec--cCceEeehHHHHHHHhc
Confidence 9874 45555556555 37888887777666554
No 60
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=58.22 E-value=61 Score=26.32 Aligned_cols=48 Identities=6% Similarity=0.050 Sum_probs=33.5
Q ss_pred EEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEE
Q 024540 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 248 (266)
Q Consensus 196 WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAt 248 (266)
-.+.++.+++.+|...||+|+++.|..+ + .. .+++...++|+++.++.
T Consensus 70 ~~~~~~~~rF~~PV~~gDtl~~~~~~~~--~-~v--~~~~~~~~~g~~v~~g~ 117 (122)
T cd03448 70 ARFKAIKVRFSSPVFPGETLRTEMWKEG--N-RV--IFQTKVVERDVVVLSNG 117 (122)
T ss_pred ceeEEEEEEEcCCccCCCEEEEEEEEeC--C-EE--EEEEEEccCCcEEEECC
Confidence 3466779999999999999999999543 3 22 34454433677766543
No 61
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=57.16 E-value=21 Score=28.44 Aligned_cols=41 Identities=15% Similarity=-0.050 Sum_probs=30.3
Q ss_pred eEEEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEE
Q 024540 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWL 234 (266)
Q Consensus 194 l~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~ 234 (266)
....+.++++++.+|...||+|++..++.+.....-....+
T Consensus 74 ~~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~~~~~~~~v~ 114 (122)
T PF01575_consen 74 PPARLGRFNVRFRAPVFPGDTLTAEVEVTEKREGKERVRVT 114 (122)
T ss_dssp ECEEEEEEEEEESS--BTTEEEEEEEEEEEEEEEEEEEEEE
T ss_pred cceEEEEEEEEEeccccCCCEEEEEEEEEEEEEcCceEEEE
Confidence 35788999999999999999999999999854444333333
No 62
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=56.38 E-value=51 Score=27.91 Aligned_cols=56 Identities=13% Similarity=-0.112 Sum_probs=40.6
Q ss_pred EEEEeeEEEEeecCCCCCEEEEEEEEeecC-----CceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASG-----KNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 196 WVVtR~qI~~~R~P~~gD~V~V~TWv~~~g-----k~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
-.+.-..+++.+|...||+|++++++.... +....| .+.++. .|++.......+++
T Consensus 94 ~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~-~~~~~~-~g~~v~~~~~~~~~ 154 (159)
T COG2030 94 ANLGGDEVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLR-LETVNQ-EGELVLTLEATVLV 154 (159)
T ss_pred eeccccceEecCCCCCCCEEEEEEEEEEeeecCCceEEEEE-EEEEcc-CCcEEEEEEEeEeE
Confidence 344556789999999999999999998642 333333 445555 78888888877654
No 63
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=54.00 E-value=80 Score=27.81 Aligned_cols=53 Identities=8% Similarity=0.043 Sum_probs=39.2
Q ss_pred EEeeEEEEee-cCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeee
Q 024540 198 VTRMQVVVDR-YPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 198 VtR~qI~~~R-~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
-..+.|++++ ++.-+|.+.++++......-++.-+=+|+|+ +|+++|.+...-
T Consensus 200 tld~ti~f~~~p~~~~~Wl~~~~~~~~~~~Gr~~~~~~l~d~-~G~lvA~~~Q~~ 253 (255)
T PF13622_consen 200 TLDHTIHFHRLPFDGDEWLLLEARSPRAGNGRALMEGRLWDE-DGRLVASSRQEA 253 (255)
T ss_dssp EEEEEEEECSHCCTTTS-EEEEEEEEEEETTEEEEEEEEEET-TS-EEEEEEEEE
T ss_pred cceeEEEEEeCCccCCceEEEEEEEeEeCCCEEEEEEEEECC-CCCEEEEEEEEe
Confidence 5667777644 4445999999999988766677788889998 899999887653
No 64
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=53.68 E-value=83 Score=28.29 Aligned_cols=53 Identities=8% Similarity=-0.088 Sum_probs=41.0
Q ss_pred EEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEee
Q 024540 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 197 VVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
.-..+.|.++++...+|.+.++++....+.-+..-+=.|+|. +|+++|...-.
T Consensus 215 aSldhtv~fh~~~~~~~W~l~~~~s~~~~~Grg~~~~~l~d~-~G~lvAs~~Qe 267 (271)
T TIGR00189 215 ASLDHSIWFHRPFRADDWLLYKCSSPSASGSRGLVEGKIFTR-DGVLIASTVQE 267 (271)
T ss_pred EeeeeeEEEeCCCCCCeeEEEEEEeccccCCceEEEEEEECC-CCCEEEEEEee
Confidence 466788888888788999999999887644444445678897 99999977654
No 65
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=48.45 E-value=1.2e+02 Score=30.72 Aligned_cols=58 Identities=9% Similarity=-0.069 Sum_probs=42.4
Q ss_pred CeEEEEEe-eEEEEeecCCCCCEEEEEEEEee-cCCceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 193 NLIWVVTR-MQVVVDRYPTWNDVVNVETWVSA-SGKNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 193 Gl~WVVtR-~qI~~~R~P~~gD~V~V~TWv~~-~gk~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
+...++.. -++++.++..-||+++++..+.. .++.....+-+++ . +|+++++|.-..+
T Consensus 399 g~lg~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~~giv~f~g~~~-v-dGelVaeael~~~ 458 (464)
T PRK13188 399 NYSTYFMKIDKVKFRQKVVPGDTLIFKVELLSPIRRGICQMQGKAY-V-NGKLVCEAELMAQ 458 (464)
T ss_pred CceEEEEeccEEEEcCCCCCCCEEEEEEEEEEEecCCEEEEEEEEE-E-CCEEEEEEEEEEE
Confidence 33444555 49999999999999999999865 3333445566666 3 7999999987654
No 66
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=42.16 E-value=1.9e+02 Score=24.57 Aligned_cols=56 Identities=13% Similarity=-0.058 Sum_probs=44.2
Q ss_pred EEEEEeeEEEEeecCCCCC-EEEEEEEEeecCC----ceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 195 IWVVTRMQVVVDRYPTWND-VVNVETWVSASGK----NGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 195 ~WVVtR~qI~~~R~P~~gD-~V~V~TWv~~~gk----~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
.....--+++++++..-|| +++++..+...+. ..+.-+-.++- +|+++++|+..-|
T Consensus 85 ~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~~~~~~~~~~v--dg~~v~~a~~~~~ 145 (150)
T cd01287 85 GAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIADASLWV--DGLRIYEAKDIAV 145 (150)
T ss_pred eEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCccEEEEEEEEEE--CCEEEEEEEccEE
Confidence 4445556899999999999 8999999998753 55666777775 7999999987654
No 67
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=42.14 E-value=1.9e+02 Score=23.71 Aligned_cols=87 Identities=7% Similarity=-0.106 Sum_probs=55.9
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCC-CCEEEEEEEEeecCC-ceEEE
Q 024540 154 GTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTW-NDVVNVETWVSASGK-NGMRR 231 (266)
Q Consensus 154 G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~-gD~V~V~TWv~~~gk-~~~~R 231 (266)
+.+--..++.+|-+++..+.-.... ..-.+...+..+.=-+++++++..- ||+++|+.......+ ....-
T Consensus 45 ~~~P~~l~iE~mAQa~a~~~g~~~~--------~~~~~~~~g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~~~~~~~ 116 (138)
T cd01289 45 GRLPAWVGIEYMAQAIAAHGGLLAR--------QQGNPPRPGFLLGSRKYEAHVDRFDLGSTLLIVVAELLQGDSGLGVF 116 (138)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHH--------hcCCCCCcEEEEEEEEEEEEcceeCCCCeeEEEeeeeeeCCCcEEEE
Confidence 5677788888888887666421110 0001223444444457888887444 999999988777653 45555
Q ss_pred EEEEEECCCCcEEEEEEee
Q 024540 232 DWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 232 df~I~D~~dGeiLarAtS~ 250 (266)
+-.++- +|+++++|+-.
T Consensus 117 ~~~~~v--~~~~va~a~l~ 133 (138)
T cd01289 117 ECTIED--QGGVLASGRLN 133 (138)
T ss_pred EEEEEE--CCEEEEEEEEE
Confidence 666775 68999998754
No 68
>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A.
Probab=41.17 E-value=1.8e+02 Score=25.80 Aligned_cols=58 Identities=12% Similarity=0.198 Sum_probs=44.6
Q ss_pred CCeEEEEEeeE-EEEee-cCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEee
Q 024540 192 KNLIWVVTRMQ-VVVDR-YPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 192 ~Gl~WVVtR~q-I~~~R-~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
.+..|+-..++ +.+.+ ++..++.+.+.+.....+.-...-+..++|. +|+++++....
T Consensus 225 ~~~~~lP~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~v~d~-~G~~~~~~~gl 284 (295)
T PF14765_consen 225 RGRVFLPVSIERIRIFRAPPPPGDRLYVYARLVKSDDDTITGDVTVFDE-DGRVVAELEGL 284 (295)
T ss_dssp TTSEEEEEEEEEEEESSS--SSTSEEEEEEEEESTTTTEEEEEEEEEET-TSBEEEEEEEE
T ss_pred CCCEEcccEeCEEEEEeccCCCCCEEEEEEEEecccceEEEEEEEEECC-CCCEEEEEccE
Confidence 45566666554 55553 5688999999999988787788999999997 89999988764
No 69
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=40.82 E-value=99 Score=32.44 Aligned_cols=50 Identities=12% Similarity=-0.033 Sum_probs=39.3
Q ss_pred eEEEEeecCCCCCEEEEEEEEeecC-----Cc-eEEEEEEEEECCCCcEEEEEEeee
Q 024540 201 MQVVVDRYPTWNDVVNVETWVSASG-----KN-GMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 201 ~qI~~~R~P~~gD~V~V~TWv~~~g-----k~-~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
.++++.+|.+.||+|+++..+.+.. +. ...-+..++|. +|+++.++....
T Consensus 604 ~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~nq-~G~~Vl~~~~~~ 659 (663)
T TIGR02278 604 ENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVNQ-NGEPVATYDVLT 659 (663)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEcC-CCCEEEEEEEHH
Confidence 3899999999999999999997642 11 35667788886 899988887653
No 70
>PLN02647 acyl-CoA thioesterase
Probab=40.73 E-value=4e+02 Score=26.90 Aligned_cols=72 Identities=13% Similarity=0.026 Sum_probs=54.5
Q ss_pred EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEE
Q 024540 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~ 218 (266)
-+..+.+...+.+..|++.=..+|.|+.|+|.--+... ..+..-.+.==+|++.+|.+.||.|.++
T Consensus 291 ~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~r~--------------a~~~~vt~svd~v~F~~PV~vGdil~l~ 356 (437)
T PLN02647 291 LENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAYAF--------------AGLRPYFLEVDHVDFLRPVDVGDFLRFK 356 (437)
T ss_pred eEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHHHH--------------cCCceEEEEecceEecCccccCcEEEEE
Confidence 45667899999999999999999999999887444322 1233444445578999999999999986
Q ss_pred EEEeec
Q 024540 219 TWVSAS 224 (266)
Q Consensus 219 TWv~~~ 224 (266)
..+...
T Consensus 357 A~V~yt 362 (437)
T PLN02647 357 SCVLYT 362 (437)
T ss_pred EEEEEE
Confidence 655543
No 71
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=40.59 E-value=87 Score=32.77 Aligned_cols=48 Identities=15% Similarity=0.066 Sum_probs=38.9
Q ss_pred EEEEeecCCCCCEEEEEEEEeecC--C----ceEEEEEEEEECCCCcEEEEEEee
Q 024540 202 QVVVDRYPTWNDVVNVETWVSASG--K----NGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 202 qI~~~R~P~~gD~V~V~TWv~~~g--k----~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
++++.+|.+.||+|+++..+.... + -...-+.+++|. +|+++.++...
T Consensus 617 ~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~nq-~G~~V~~~~~~ 670 (675)
T PRK11563 617 NLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTNQ-DGELVATYDIL 670 (675)
T ss_pred eEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEEC-CCCEEEEEEEH
Confidence 689999999999999999998752 1 136677888886 89998888765
No 72
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=39.36 E-value=2e+02 Score=23.07 Aligned_cols=88 Identities=11% Similarity=0.193 Sum_probs=59.2
Q ss_pred CCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEEEEeecCC-----
Q 024540 152 ADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGK----- 226 (266)
Q Consensus 152 ~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk----- 226 (266)
+.+|+...-++.=+-+++........ |. + .+..+++..+.+++.++..+.-.+.|+..+.....
T Consensus 39 ~~dh~~gmll~Ea~RQa~~~~~h~~~------~v-p----~~~~~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~ 107 (132)
T PF03756_consen 39 PGDHVPGMLLLEAARQAGIALAHRFY------GV-P----LDHQFVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRP 107 (132)
T ss_pred CCCccChHHHHHHHHHHHHHhhcccc------CC-C----CCceEEEEEEEEEEccccccCCCEEEEEEEEeccccCCcc
Confidence 34455555555555555444333221 22 2 24568999999999999888888888887775333
Q ss_pred ceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 227 NGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 227 ~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
..+..+..|+. +|+++++++..+-
T Consensus 108 ~~~~~~v~~~q--~g~~~a~~~~~~t 131 (132)
T PF03756_consen 108 RGLRFRVTVSQ--GGRVVATASMTFT 131 (132)
T ss_pred ceEEEEEEEEE--CCEEEEEEEEEEE
Confidence 36777788886 6999999988763
No 73
>PF03284 PHZA_PHZB: Phenazine biosynthesis protein A/B; InterPro: IPR004964 The phenazine biosynthesis proteins A and B are involved in the biosynthesis of this antibiotic. Phenazine is a nitrogen-containing heterocyclic molecule with important implications in virulence, competition and biological control.; GO: 0017000 antibiotic biosynthetic process; PDB: 3EX9_A 3JUP_B 3DZL_A 3JUN_A 3JUO_A 3CNM_A 3JUM_B 3JUQ_A 3B4O_A 3B4P_B ....
Probab=38.61 E-value=3.1 Score=36.30 Aligned_cols=74 Identities=22% Similarity=0.410 Sum_probs=46.9
Q ss_pred hhcccccccC-CCCCc-cCCCCcCccccCCce--EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCC
Q 024540 109 QWMMLDWKPR-RSDML-VDPFGIGKIVQDGFI--FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFG 184 (266)
Q Consensus 109 ~~~~~~~~~~-~~~~~-~~~~~~~~~~~dg~v--fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG 184 (266)
||..+.-+.. +|+.. ++.=|.|++.-.|.. |=+++-|.+.|.|.-....+..+||=+|. ++++|+.
T Consensus 82 eW~nv~ifeT~DP~~fwVEcdG~G~i~fpGypeg~y~NHfiHsFel~nGkI~~~REFmNp~qq-----~RaLgi~----- 151 (162)
T PF03284_consen 82 EWYNVRIFETQDPNHFWVECDGRGKILFPGYPEGYYENHFIHSFELENGKIKRNREFMNPFQQ-----LRALGIP----- 151 (162)
T ss_dssp EEEEEEEEEBSSTTEEEEEEEEEEEE--TTS--EEEEEEEEEEEEEETTEEEEEEEEE-HHHH-----HHHTT-------
T ss_pred EEEEEEeecccCCCEEEEEecCccceecCCCCcccceeeeEEEEEeeCCEEEeehhhcCHHHH-----HHHcCCC-----
Confidence 6877775544 56543 555599999777765 66788899999998667788999998875 7789984
Q ss_pred CcHHHhhCC
Q 024540 185 ATPAMAKKN 193 (266)
Q Consensus 185 ~t~em~k~G 193 (266)
.|...+.|
T Consensus 152 -vP~IkR~g 159 (162)
T PF03284_consen 152 -VPEIKREG 159 (162)
T ss_dssp -------TT
T ss_pred -CCccccCC
Confidence 26655554
No 74
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=35.08 E-value=2e+02 Score=26.76 Aligned_cols=53 Identities=11% Similarity=-0.047 Sum_probs=47.4
Q ss_pred EEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeee
Q 024540 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 197 VVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
.+..+|+.+.++...+..|+.+.....-||.++.|.-..+. +|+++..++...
T Consensus 56 ~~hSlh~~Fl~pg~~~~pi~y~Ve~lRdGRSfstr~V~a~Q--~g~~if~~~~sF 108 (286)
T PRK10526 56 LVHSFHSYFLRPGDSQKPIIYDVETLRDGNSFSARRVAAIQ--NGKPIFYMTASF 108 (286)
T ss_pred CceEEEEEcCCCCCCCCCEEEEEEEEeCCCceEeEEEEEEE--CCEEEEEEEEEe
Confidence 67899999999999999999999999999999999998886 689888877653
No 75
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=32.62 E-value=4.5e+02 Score=25.28 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=73.3
Q ss_pred EEEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEE
Q 024540 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (266)
Q Consensus 139 fe~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~ 218 (266)
=.+.+.||...-=++...-+..++-|+.|.-.-.....- +|-+. .+.+..-+=..+.|.+.|+.+.+|.+.-.
T Consensus 176 ~~~~vWira~~~~pdd~~~~~~lLay~SD~~ll~tal~~---Hg~~~----~~~~~~~aSLDHs~wFhrp~~~ddWlLy~ 248 (289)
T COG1946 176 PQQQVWIRARGELPDDPRLHQALLAYLSDFTLLDTALQP---HGLGF----LTPGIQVASLDHSMWFHRPFRLDDWLLYA 248 (289)
T ss_pred cceeEEEEcCCCCCCCHHHHHHHHHHhccchhhhhhhcc---CCCcc----ccCcceEeeccceEEEeccccCCCEEEEE
Confidence 346788998877777777788889999887654443221 11111 24566667778889999999999999988
Q ss_pred EEEeec-CCceEEEEEEEEECCCCcEEEEEEeeeh
Q 024540 219 TWVSAS-GKNGMRRDWLIRNAKTGETLTRATRWGI 252 (266)
Q Consensus 219 TWv~~~-gk~~~~Rdf~I~D~~dGeiLarAtS~WV 252 (266)
+..... +..+..| =.|++. +|+++|...-.-+
T Consensus 249 ~~sp~A~~~rgl~~-G~lf~r-~G~LiA~~~QEG~ 281 (289)
T COG1946 249 QESPSASGGRGLVR-GQLFDR-DGQLIASVVQEGL 281 (289)
T ss_pred eeCCcccCCcceee-eEEEcC-CCCEEEEEeeeEE
Confidence 887765 4444555 457776 9999997655443
No 76
>PLN02864 enoyl-CoA hydratase
Probab=32.28 E-value=2.2e+02 Score=26.94 Aligned_cols=49 Identities=8% Similarity=0.039 Sum_probs=34.7
Q ss_pred EEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEee
Q 024540 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 197 VVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
.+.++++++.+|...||+|.++.|.. ++ ... |++...++|+++..+...
T Consensus 254 ~~~~~~~rF~~PV~pGdtl~~~~~~~--~~-~v~--~~~~~~~~g~~vl~G~a~ 302 (310)
T PLN02864 254 AVKTISGRFLLHVYPGETLVTEMWLE--GL-RVI--YQTKVKERNKAVLSGYVD 302 (310)
T ss_pred eEEEEEEEEcCCccCCCEEEEEEEeC--CC-EEE--EEEEEecCCeEEEEEEEE
Confidence 45678999999999999999999865 22 222 444433478877777654
No 77
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=31.84 E-value=2.1e+02 Score=24.55 Aligned_cols=59 Identities=14% Similarity=0.031 Sum_probs=45.2
Q ss_pred eEEEEEeeEEEEeecCCCCCEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 194 l~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
+.-.+.=-+++++++..-||.+.++-.....+...+..-.-.... ||+++++|+-..+.
T Consensus 85 ~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~~~~~~a~V-dg~~v~~a~~~~~~ 143 (147)
T COG0764 85 LGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIGKAKGVATV-DGKVVAEAELLFAG 143 (147)
T ss_pred EEEEEEecceeecCccCCCCEEEEEEEEEEecccceEEEEEEEEE-CCEEEEEEEEEEEE
Confidence 566666678899999999999999999998884444454545544 89999988876543
No 78
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=30.92 E-value=2.3e+02 Score=24.15 Aligned_cols=99 Identities=15% Similarity=0.059 Sum_probs=57.5
Q ss_pred EEEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEE
Q 024540 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (266)
Q Consensus 140 e~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~T 219 (266)
.+.+-++..+.=++...-+..++-|+.|.-.-.. + +.-+||+. .++. |=..+.|-+.|+++.+|.+.-.+
T Consensus 29 ~~~vW~ra~~~~p~d~~~h~~~laY~SD~~~L~t--a-l~~H~~~~------~~~~-vSlDHs~wFHrpfr~ddWlLY~~ 98 (131)
T PF02551_consen 29 HQQVWVRANGILPDDPRIHSCALAYASDFTLLDT--A-LQPHGFGF------PKFQ-VSLDHSMWFHRPFRADDWLLYAI 98 (131)
T ss_dssp EECCCCCCCSTS-TTHCCCCCHHHHHCCCCCGGG--G-GCCGCCCC------CCEE-EEEEEEEEE-S--BTTS-EEEEE
T ss_pred hhhhhHHhCCCCCCchhHhHHHHHHHhHHhHHHh--h-hccccccc------cccE-EecceeEEEcCCCCCCCCEEEEE
Confidence 3445566666666666666667777776432211 1 11122221 2333 36778888899999999999888
Q ss_pred EEeecCCceEEEEEEEE-ECCCCcEEEEEEe
Q 024540 220 WVSASGKNGMRRDWLIR-NAKTGETLTRATR 249 (266)
Q Consensus 220 Wv~~~gk~~~~Rdf~I~-D~~dGeiLarAtS 249 (266)
.......-+..++=+++ +. +|++++.+..
T Consensus 99 ~sp~A~~~Rgl~~G~~f~~q-~G~Lvas~~Q 128 (131)
T PF02551_consen 99 ESPSASGGRGLVRGRFFDTQ-DGELVASVVQ 128 (131)
T ss_dssp EEEEEETTEEEEEECCEEEC-TTEEEEEEEE
T ss_pred EcCccccCcccccCceEecC-CCCEEEEEec
Confidence 88665444555556677 54 8999997654
No 79
>PHA02582 10 baseplate wedge subunit and tail pin; Provisional
Probab=29.32 E-value=88 Score=32.67 Aligned_cols=46 Identities=11% Similarity=0.086 Sum_probs=37.8
Q ss_pred CeEEEEEeeEEEEeecCCCCCEEEEEEEEeec---CCceEEEEEEEEEC
Q 024540 193 NLIWVVTRMQVVVDRYPTWNDVVNVETWVSAS---GKNGMRRDWLIRNA 238 (266)
Q Consensus 193 Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv~~~---gk~~~~Rdf~I~D~ 238 (266)
|-.-.|--..|+++.|...||+|+|.|+..+. +..+-+|.-.|+|.
T Consensus 218 g~l~~LdG~~Irlr~pc~~gDtv~i~ty~dgia~~RSsY~~~~i~v~d~ 266 (604)
T PHA02582 218 GELVPLDGKSIRLRQPCNAGDTVQIVTYMDGIASWRSSYNRRTIRVYDT 266 (604)
T ss_pred CceeccCCceeEeecccCCCCeEEEEEeecchhhhhhhheeeeEEEEec
Confidence 43445556789999999999999999999874 66678899999985
No 80
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=28.51 E-value=3.5e+02 Score=23.11 Aligned_cols=87 Identities=18% Similarity=0.124 Sum_probs=50.2
Q ss_pred CcCCCCCcCHHHHHHHHHHHHHH----HHHHcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEEEEEe--
Q 024540 149 EIGADGTASIETLMNHLQETALN----HVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVS-- 222 (266)
Q Consensus 149 E~D~~G~ls~~~lmn~lQEaA~~----H~~slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~TWv~-- 222 (266)
.++..|++.=..+...+--++.- ++++.|+ +---||.+-+|+|.+|.. +| ++..+...
T Consensus 39 N~N~~~T~FgGSl~slatLaGW~lv~l~l~e~~~--------------~~~IVi~~~~i~Y~~Pv~-~d-~~A~~~~~~~ 102 (144)
T PF09500_consen 39 NINHHGTMFGGSLYSLATLAGWGLVWLQLKEAGL--------------NGDIVIADSNIRYLKPVT-GD-FTARCSLPEP 102 (144)
T ss_dssp GB-TTSSB-HHHHHHHHHHHHHHHHHHHHHHHT-----------------EEEEEEEEEEE-S----S---EEEEE----
T ss_pred CcCCCCCcchHHHHHHHHHHHHHHHHHHHHHhCC--------------CCcEEEEeCceEEcCCCC-CC-cEEEEecccc
Confidence 56667777666666655555433 2333443 246899999999999887 44 44444444
Q ss_pred -----------ecCCceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 223 -----------ASGKNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 223 -----------~~gk~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
..+|.++.-+-+|++ +|+.+++-+..+|.
T Consensus 103 ~~~~~~~~~l~~~grari~l~~~i~~--~~~~~a~f~G~yv~ 142 (144)
T PF09500_consen 103 EDWERFLQTLARGGRARITLEVEIYS--GGELAAEFTGRYVA 142 (144)
T ss_dssp ---S---GGGGCTS-EEEEEEEEEEE--TTEEEEEEEEEEEE
T ss_pred chhHHHHHHHHcCCcEEEEEEEEEEE--CCEEEEEEEEEEEE
Confidence 336677778888887 58899998888764
No 81
>PF01947 DUF98: Protein of unknown function (DUF98); InterPro: IPR002800 This entry represents a group of proteins with no known function.; PDB: 2NWI_A.
Probab=25.90 E-value=2.7e+02 Score=23.61 Aligned_cols=28 Identities=29% Similarity=0.516 Sum_probs=22.4
Q ss_pred cCCceEEEEEEEEECCCCcEEEEEEeeehh
Q 024540 224 SGKNGMRRDWLIRNAKTGETLTRATRWGIF 253 (266)
Q Consensus 224 ~gk~~~~Rdf~I~D~~dGeiLarAtS~WVl 253 (266)
.+.-..+|+-.+.. +|+.++.|.|.|..
T Consensus 43 ~~~~~l~R~V~L~~--~~~~lvyA~S~~~~ 70 (149)
T PF01947_consen 43 IGDPVLRREVWLKG--SGEPLVYAESWWPI 70 (149)
T ss_dssp TT-EEEEEEEEEEE--TTEEEEEEEEEEEG
T ss_pred CCCceEEEEEEEEE--CCeeEEEEEEeCcH
Confidence 36667889888887 79999999998864
No 82
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=24.39 E-value=33 Score=32.99 Aligned_cols=43 Identities=28% Similarity=0.558 Sum_probs=29.9
Q ss_pred cccCCCc--ccCcceeecCCcccccCCCCCCCCCCcccccccC-CChHH
Q 024540 49 NAQAPSK--INGTSVGLTTPAESLKNGDISTSSPPPRTFINQL-PDWSM 94 (266)
Q Consensus 49 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 94 (266)
+...+|| |||+.||+-...+ +..-+-.+|+...|.-|| -||.-
T Consensus 98 ~~~~~P~~~isaSAvGyYG~~~---~~~~tE~~~~g~~Fla~lc~~WE~ 143 (297)
T COG1090 98 ASETKPKVLISASAVGYYGHSG---DRVVTEESPPGDDFLAQLCQDWEE 143 (297)
T ss_pred hccCCCcEEEecceEEEecCCC---ceeeecCCCCCCChHHHHHHHHHH
Confidence 3568898 9999999986322 221223489999999987 36653
No 83
>PF10648 Gmad2: Immunoglobulin-like domain of bacterial spore germination; InterPro: IPR018911 This domain is found linked to IPR019606 from INTERPRO in some bacterial proteins. It is predicted to contain an immunoglobulin-like all-beta fold.
Probab=23.17 E-value=1.5e+02 Score=23.11 Aligned_cols=42 Identities=21% Similarity=0.174 Sum_probs=27.2
Q ss_pred cCCCCCEEEEEEEEeecCC-ceEEEEEEEEECCCCcEEEEEEee
Q 024540 208 YPTWNDVVNVETWVSASGK-NGMRRDWLIRNAKTGETLTRATRW 250 (266)
Q Consensus 208 ~P~~gD~V~V~TWv~~~gk-~~~~Rdf~I~D~~dGeiLarAtS~ 250 (266)
.|..||.|.=.-.+.+.-+ |=..-.|+|+|. +|+++++....
T Consensus 7 ~P~pg~~V~sp~~V~G~A~~FEgtv~~rv~D~-~g~vl~e~~~~ 49 (88)
T PF10648_consen 7 APAPGDTVSSPVKVSGKARVFEGTVNIRVRDG-HGEVLAEGFVT 49 (88)
T ss_pred CCCCcCCcCCCEEEEEEEEEeeeEEEEEEEcC-CCcEEEEeeEE
Confidence 3555776665555555433 336677889997 89999766544
No 84
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=22.47 E-value=6.2e+02 Score=23.41 Aligned_cols=101 Identities=11% Similarity=0.039 Sum_probs=59.7
Q ss_pred EEEEeecCCcCCCCCcCHHHHHHHHHHHHHHHHH--HcCCCCcCCCCcHHHhhCCeEEEEEeeEEEEeecCCCCCEEEEE
Q 024540 141 QNFSIRSYEIGADGTASIETLMNHLQETALNHVM--TAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (266)
Q Consensus 141 ~~f~Ir~yE~D~~G~ls~~~lmn~lQEaA~~H~~--slGl~~dgFG~t~em~k~Gl~WVVtR~qI~~~R~P~~gD~V~V~ 218 (266)
..+-+|..+-.++...-+...+-|+.|.-.--.. ..|. + .......-.-..+.|.++++++.+|.+..+
T Consensus 178 ~~~W~R~~~~~~~d~~~~~~~lay~sD~~~l~~al~~~~~-----~----~~~~~~~~aSLdhsi~Fh~~~~~d~W~L~~ 248 (286)
T PRK10526 178 RQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGI-----G----FLEPGMQIATIDHSMWFHRPFNLNEWLLYS 248 (286)
T ss_pred eEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhccC-----C----ccCCcceEEeeeEeEEEeCCCCCCceEEEE
Confidence 4466776654444344444455566552221111 1121 1 011233345678888999999999999999
Q ss_pred EEEeecCCceEEEEEEEEECCCCcEEEEEEeee
Q 024540 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATRWG 251 (266)
Q Consensus 219 TWv~~~gk~~~~Rdf~I~D~~dGeiLarAtS~W 251 (266)
++....+.-+..-.=.|++. +|+++|.+.-.-
T Consensus 249 ~~s~~a~~gr~~~~g~i~~~-~G~LvAs~~Qeg 280 (286)
T PRK10526 249 VESTSASSARGFVRGEFYTQ-DGVLVASTVQEG 280 (286)
T ss_pred EECCcccCCceEEEEEEECC-CCCEEEEEEeeE
Confidence 99986533333333478887 999999876543
Done!