Query 024544
Match_columns 266
No_of_seqs 121 out of 1064
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 10:07:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024544.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024544hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lt8_A Betaine-homocysteine me 100.0 3.6E-55 1.2E-59 413.3 13.6 220 8-264 9-232 (406)
2 1q7z_A 5-methyltetrahydrofolat 100.0 3.7E-53 1.3E-57 415.0 16.0 217 10-264 5-222 (566)
3 3eoo_A Methylisocitrate lyase; 95.8 0.094 3.2E-06 47.1 11.9 41 172-217 175-215 (298)
4 3lye_A Oxaloacetate acetyl hyd 95.7 0.16 5.3E-06 45.8 12.8 42 172-217 182-223 (307)
5 1xg4_A Probable methylisocitra 95.3 0.09 3.1E-06 47.1 9.8 41 172-217 171-211 (295)
6 3fa4_A 2,3-dimethylmalate lyas 94.7 0.55 1.9E-05 42.1 13.1 42 172-217 174-215 (302)
7 1zlp_A PSR132, petal death pro 94.6 0.28 9.5E-06 44.4 11.0 42 171-217 192-233 (318)
8 3lg3_A Isocitrate lyase; conse 94.2 0.97 3.3E-05 42.5 14.0 32 173-205 276-308 (435)
9 1ydo_A HMG-COA lyase; TIM-barr 94.1 0.6 2.1E-05 41.7 12.1 130 63-238 89-224 (307)
10 1f8m_A Isocitrate lyase, ICL; 93.9 0.74 2.5E-05 43.2 12.6 32 173-205 272-304 (429)
11 3i4e_A Isocitrate lyase; struc 93.8 0.78 2.7E-05 43.2 12.6 32 173-205 276-308 (439)
12 3eol_A Isocitrate lyase; seatt 93.4 1.7 5.9E-05 40.8 14.2 32 173-205 271-303 (433)
13 2cw6_A Hydroxymethylglutaryl-C 92.8 2.1 7.3E-05 37.7 13.4 64 169-238 157-223 (298)
14 2ze3_A DFA0005; organic waste 92.5 1 3.6E-05 39.7 10.9 33 172-204 172-204 (275)
15 2ftp_A Hydroxymethylglutaryl-C 92.3 1.9 6.4E-05 38.2 12.4 131 64-238 92-226 (302)
16 3rmj_A 2-isopropylmalate synth 91.9 2.2 7.6E-05 39.1 12.6 67 168-238 157-227 (370)
17 3noy_A 4-hydroxy-3-methylbut-2 91.8 0.098 3.3E-06 48.0 3.3 80 170-252 48-144 (366)
18 3vnd_A TSA, tryptophan synthas 91.5 2 6.9E-05 37.6 11.5 31 47-77 22-54 (267)
19 1q7z_A 5-methyltetrahydrofolat 91.0 2.3 7.8E-05 41.3 12.3 155 55-263 122-287 (566)
20 1s2w_A Phosphoenolpyruvate pho 90.9 0.19 6.3E-06 45.0 4.1 42 172-216 174-216 (295)
21 3ewb_X 2-isopropylmalate synth 90.4 8 0.00028 34.1 14.5 67 168-238 150-220 (293)
22 3ble_A Citramalate synthase fr 90.3 3.8 0.00013 36.9 12.5 65 168-238 169-236 (337)
23 1ydn_A Hydroxymethylglutaryl-C 90.3 2.7 9.1E-05 36.9 11.2 132 62-238 86-222 (295)
24 2hjp_A Phosphonopyruvate hydro 90.3 0.17 5.8E-06 45.2 3.3 42 172-216 170-212 (290)
25 3ih1_A Methylisocitrate lyase; 89.7 0.22 7.5E-06 44.8 3.5 40 172-216 179-218 (305)
26 3nav_A Tryptophan synthase alp 89.5 2.1 7.1E-05 37.6 9.8 33 174-207 118-150 (271)
27 1lt8_A Betaine-homocysteine me 89.0 2.7 9.1E-05 39.1 10.6 105 54-214 134-246 (406)
28 3eeg_A 2-isopropylmalate synth 86.7 2.4 8.2E-05 38.1 8.5 67 168-238 151-221 (325)
29 3b8i_A PA4872 oxaloacetate dec 84.9 0.47 1.6E-05 42.2 2.8 37 172-213 172-208 (287)
30 4g9p_A 4-hydroxy-3-methylbut-2 84.3 1.5 5.3E-05 40.7 6.0 82 170-252 40-148 (406)
31 3tha_A Tryptophan synthase alp 83.3 2.4 8.1E-05 37.0 6.5 87 174-261 109-219 (252)
32 1to3_A Putative aldolase YIHT; 82.8 6.3 0.00021 35.0 9.3 47 169-216 178-229 (304)
33 4ay7_A Methylcobalamin\: coenz 82.1 10 0.00035 33.8 10.7 81 174-263 255-343 (348)
34 3m47_A Orotidine 5'-phosphate 82.0 9.7 0.00033 32.2 9.9 30 50-79 73-102 (228)
35 4fxs_A Inosine-5'-monophosphat 81.4 6.2 0.00021 37.5 9.2 43 174-218 286-343 (496)
36 2nx9_A Oxaloacetate decarboxyl 81.3 17 0.00057 34.3 12.1 64 168-238 158-224 (464)
37 3vni_A Xylose isomerase domain 80.4 10 0.00035 32.2 9.7 41 162-203 126-174 (294)
38 3usb_A Inosine-5'-monophosphat 80.4 7.4 0.00025 37.1 9.4 43 174-218 311-368 (511)
39 2ztj_A Homocitrate synthase; ( 79.7 32 0.0011 31.3 13.2 65 168-238 145-212 (382)
40 1o66_A 3-methyl-2-oxobutanoate 78.8 23 0.00079 31.1 11.3 76 176-256 103-188 (275)
41 4fo4_A Inosine 5'-monophosphat 78.7 11 0.00039 34.3 9.8 43 174-218 163-220 (366)
42 2uwf_A Endoxylanase, alkaline 78.3 10 0.00035 34.3 9.3 46 168-215 202-254 (356)
43 2qiw_A PEP phosphonomutase; st 78.2 0.91 3.1E-05 39.6 2.1 32 172-203 172-203 (255)
44 3q58_A N-acetylmannosamine-6-p 77.2 2.7 9.3E-05 35.8 4.8 64 171-249 91-156 (229)
45 3vav_A 3-methyl-2-oxobutanoate 76.9 2.5 8.4E-05 37.4 4.5 40 168-213 173-212 (275)
46 3ivs_A Homocitrate synthase, m 76.3 23 0.00077 33.0 11.2 63 169-238 181-246 (423)
47 3igs_A N-acetylmannosamine-6-p 76.3 3 0.0001 35.5 4.8 64 171-249 91-156 (232)
48 1o4u_A Type II quinolic acid p 76.2 2.5 8.6E-05 37.4 4.4 64 174-250 206-269 (285)
49 1r85_A Endo-1,4-beta-xylanase; 76.1 9.7 0.00033 34.9 8.5 50 168-219 212-269 (379)
50 2dep_A Xylanase B, thermostabl 75.9 12 0.00041 33.8 9.0 46 168-215 201-253 (356)
51 4fo4_A Inosine 5'-monophosphat 75.8 3.7 0.00013 37.6 5.6 67 170-248 109-176 (366)
52 1m3u_A 3-methyl-2-oxobutanoate 75.8 19 0.00066 31.4 9.9 75 176-255 102-187 (264)
53 1ur1_A Endoxylanase; hydrolase 75.7 15 0.00052 33.5 9.7 49 168-218 209-265 (378)
54 3qze_A DHDPS, dihydrodipicolin 75.6 37 0.0013 30.0 12.1 46 53-104 42-88 (314)
55 1qpo_A Quinolinate acid phosph 75.4 3.9 0.00013 36.2 5.4 65 173-250 206-270 (284)
56 1rqb_A Transcarboxylase 5S sub 73.6 35 0.0012 32.8 12.0 66 168-238 175-243 (539)
57 2ekc_A AQ_1548, tryptophan syn 73.1 32 0.0011 29.4 10.7 33 174-207 115-147 (262)
58 3flu_A DHDPS, dihydrodipicolin 73.0 47 0.0016 28.9 12.0 46 53-104 26-72 (297)
59 2vc6_A MOSA, dihydrodipicolina 72.8 44 0.0015 29.0 11.7 47 53-104 19-65 (292)
60 3emz_A Xylanase, endo-1,4-beta 72.6 12 0.00042 33.5 8.2 47 168-216 187-240 (331)
61 1xky_A Dihydrodipicolinate syn 72.0 50 0.0017 28.8 12.2 46 53-104 31-77 (301)
62 2ojp_A DHDPS, dihydrodipicolin 71.8 50 0.0017 28.7 11.9 46 53-104 20-66 (292)
63 2ehh_A DHDPS, dihydrodipicolin 71.6 50 0.0017 28.7 12.2 46 53-104 19-65 (294)
64 3na8_A Putative dihydrodipicol 71.6 47 0.0016 29.3 11.7 47 53-104 43-89 (315)
65 4h3d_A 3-dehydroquinate dehydr 71.4 3.8 0.00013 35.6 4.3 58 162-223 30-93 (258)
66 3cqj_A L-ribulose-5-phosphate 71.3 46 0.0016 28.1 11.5 41 162-203 141-186 (295)
67 1n82_A Xylanase, intra-cellula 70.9 17 0.00059 32.3 8.7 46 168-215 188-240 (331)
68 3tak_A DHDPS, dihydrodipicolin 70.9 49 0.0017 28.7 11.5 46 53-104 20-66 (291)
69 2yxg_A DHDPS, dihydrodipicolin 70.4 53 0.0018 28.5 11.9 46 53-104 19-65 (289)
70 1v0l_A Endo-1,4-beta-xylanase 70.2 12 0.00042 33.2 7.5 49 169-219 184-240 (313)
71 3bg3_A Pyruvate carboxylase, m 70.2 61 0.0021 32.2 13.2 65 168-238 261-328 (718)
72 1o5k_A DHDPS, dihydrodipicolin 69.9 57 0.0019 28.6 12.0 46 53-104 31-77 (306)
73 2eja_A URO-D, UPD, uroporphyri 69.8 23 0.00079 31.2 9.3 27 174-200 245-271 (338)
74 2b7n_A Probable nicotinate-nuc 69.7 5.1 0.00018 35.0 4.8 59 178-249 199-257 (273)
75 3f4w_A Putative hexulose 6 pho 69.7 8.6 0.00029 31.4 6.0 40 174-215 70-109 (211)
76 1m3u_A 3-methyl-2-oxobutanoate 69.3 4.8 0.00017 35.2 4.5 35 168-203 161-195 (264)
77 2v9d_A YAGE; dihydrodipicolini 69.3 50 0.0017 29.5 11.5 46 53-104 50-96 (343)
78 3qfe_A Putative dihydrodipicol 69.2 54 0.0018 29.0 11.6 45 54-104 31-76 (318)
79 2rfg_A Dihydrodipicolinate syn 69.1 53 0.0018 28.6 11.4 47 53-104 19-65 (297)
80 3qja_A IGPS, indole-3-glycerol 68.6 8.1 0.00028 33.7 5.8 62 173-250 127-190 (272)
81 1f6k_A N-acetylneuraminate lya 68.5 59 0.002 28.2 11.5 47 53-104 22-69 (293)
82 2r8w_A AGR_C_1641P; APC7498, d 68.4 63 0.0022 28.7 11.9 46 53-104 53-99 (332)
83 1o66_A 3-methyl-2-oxobutanoate 68.4 3.8 0.00013 36.1 3.6 35 168-203 161-195 (275)
84 3si9_A DHDPS, dihydrodipicolin 67.9 59 0.002 28.7 11.5 47 53-104 41-87 (315)
85 3tqv_A Nicotinate-nucleotide p 67.8 6 0.0002 35.1 4.8 62 173-250 210-271 (287)
86 3daq_A DHDPS, dihydrodipicolin 67.6 57 0.0019 28.3 11.3 47 53-104 21-67 (292)
87 3a5f_A Dihydrodipicolinate syn 67.5 46 0.0016 28.9 10.6 46 53-104 20-66 (291)
88 3cpr_A Dihydrodipicolinate syn 67.1 65 0.0022 28.2 11.9 46 53-104 35-81 (304)
89 2wkj_A N-acetylneuraminate lya 66.7 58 0.002 28.5 11.2 47 53-104 30-76 (303)
90 3daq_A DHDPS, dihydrodipicolin 65.9 14 0.00048 32.4 6.9 76 161-249 20-104 (292)
91 3l0g_A Nicotinate-nucleotide p 65.7 6.8 0.00023 35.0 4.7 61 174-250 220-280 (300)
92 3fkr_A L-2-keto-3-deoxyarabona 65.5 71 0.0024 28.0 11.9 46 53-104 27-73 (309)
93 1oy0_A Ketopantoate hydroxymet 65.1 36 0.0012 29.9 9.3 79 173-256 118-206 (281)
94 1oy0_A Ketopantoate hydroxymet 64.8 4.4 0.00015 35.8 3.3 40 168-213 179-218 (281)
95 3b4u_A Dihydrodipicolinate syn 64.8 64 0.0022 28.0 11.0 45 53-103 22-67 (294)
96 1i1w_A Endo-1,4-beta-xylanase; 64.5 24 0.00082 31.0 8.2 50 168-219 185-241 (303)
97 1j93_A UROD, uroporphyrinogen 64.5 59 0.002 28.7 11.0 25 174-198 260-284 (353)
98 2jbm_A Nicotinate-nucleotide p 64.5 6.4 0.00022 34.9 4.4 39 177-216 213-251 (299)
99 2r14_A Morphinone reductase; H 64.5 80 0.0027 28.6 12.0 77 170-259 257-341 (377)
100 1w32_A Endo-1,4-beta-xylanase 64.4 29 0.001 31.2 8.9 45 169-215 193-246 (348)
101 3l21_A DHDPS, dihydrodipicolin 64.4 73 0.0025 27.8 12.0 46 53-104 34-80 (304)
102 1us2_A Xylanase10C, endo-beta- 64.3 23 0.0008 34.0 8.5 46 168-215 360-412 (530)
103 3cpr_A Dihydrodipicolinate syn 63.3 16 0.00056 32.1 6.9 75 161-248 34-117 (304)
104 2d1z_A Endo-1,4-beta-D-xylanas 63.1 16 0.00054 33.8 7.0 45 169-215 184-235 (436)
105 3si9_A DHDPS, dihydrodipicolin 63.1 15 0.00051 32.7 6.6 74 161-248 40-123 (315)
106 2qul_A D-tagatose 3-epimerase; 62.9 66 0.0022 26.8 10.9 42 161-203 126-175 (290)
107 3a5f_A Dihydrodipicolinate syn 61.7 19 0.00066 31.4 7.0 77 161-250 19-104 (291)
108 4dpp_A DHDPS 2, dihydrodipicol 61.6 18 0.00061 33.0 6.9 76 161-249 77-161 (360)
109 3m5v_A DHDPS, dihydrodipicolin 61.6 82 0.0028 27.4 12.1 47 53-104 26-72 (301)
110 3s5o_A 4-hydroxy-2-oxoglutarat 61.5 83 0.0028 27.5 12.2 22 53-74 33-54 (307)
111 3u7b_A Endo-1,4-beta-xylanase; 61.4 44 0.0015 29.8 9.4 47 168-216 184-245 (327)
112 3paj_A Nicotinate-nucleotide p 61.2 12 0.0004 33.7 5.5 60 175-250 245-304 (320)
113 2qjg_A Putative aldolase MJ040 61.2 14 0.00048 31.5 5.9 84 172-259 103-197 (273)
114 3qxb_A Putative xylose isomera 60.3 33 0.0011 29.5 8.3 42 164-205 154-202 (316)
115 3tak_A DHDPS, dihydrodipicolin 60.1 18 0.00061 31.6 6.4 76 161-249 19-103 (291)
116 2inf_A URO-D, UPD, uroporphyri 59.9 73 0.0025 28.3 10.7 24 174-197 258-281 (359)
117 3b4u_A Dihydrodipicolinate syn 59.5 27 0.00092 30.5 7.5 76 161-249 21-105 (294)
118 2wx4_A DCP1, decapping protein 59.0 2.7 9.2E-05 26.9 0.6 18 50-67 22-39 (46)
119 2rfg_A Dihydrodipicolinate syn 58.9 27 0.00091 30.6 7.4 76 161-249 18-102 (297)
120 2w5f_A Endo-1,4-beta-xylanase 58.2 27 0.00091 33.4 7.8 48 169-218 395-452 (540)
121 3gnn_A Nicotinate-nucleotide p 57.7 11 0.00038 33.5 4.6 61 174-250 222-282 (298)
122 1jvn_A Glutamine, bifunctional 57.6 45 0.0015 31.9 9.3 21 59-79 351-371 (555)
123 3eb2_A Putative dihydrodipicol 57.3 83 0.0028 27.4 10.4 47 53-104 23-69 (300)
124 1bxb_A Xylose isomerase; xylos 57.3 1.1E+02 0.0036 27.4 11.7 73 162-237 153-234 (387)
125 3e96_A Dihydrodipicolinate syn 57.1 94 0.0032 27.3 10.8 47 53-104 31-77 (316)
126 3fkr_A L-2-keto-3-deoxyarabona 56.9 28 0.00097 30.6 7.3 75 161-248 26-109 (309)
127 1muw_A Xylose isomerase; atomi 56.9 87 0.003 27.9 10.8 72 163-237 154-234 (386)
128 2r91_A 2-keto-3-deoxy-(6-phosp 56.9 96 0.0033 26.7 12.1 22 53-74 17-38 (286)
129 2nu8_B SCS-beta, succinyl-COA 56.8 28 0.00096 31.8 7.4 67 161-239 293-363 (388)
130 2vc6_A MOSA, dihydrodipicolina 56.6 23 0.00079 30.9 6.6 77 161-250 18-103 (292)
131 1xky_A Dihydrodipicolinate syn 56.5 22 0.00074 31.3 6.4 76 161-249 30-114 (301)
132 2qf7_A Pyruvate carboxylase pr 55.9 1.5E+02 0.005 31.2 13.4 64 168-238 709-775 (1165)
133 2yxg_A DHDPS, dihydrodipicolin 55.8 24 0.00081 30.8 6.5 77 160-249 17-102 (289)
134 3flu_A DHDPS, dihydrodipicolin 55.8 28 0.00094 30.5 7.0 75 161-248 25-108 (297)
135 3dz1_A Dihydrodipicolinate syn 55.6 1.1E+02 0.0036 26.9 11.7 46 53-104 27-73 (313)
136 1xim_A D-xylose isomerase; iso 55.4 1.1E+02 0.0036 27.5 11.1 73 163-238 154-235 (393)
137 1w3i_A EDA, 2-keto-3-deoxy glu 55.4 1E+02 0.0035 26.6 11.4 22 53-74 18-39 (293)
138 3d0c_A Dihydrodipicolinate syn 54.8 1.1E+02 0.0038 26.8 11.6 46 53-104 31-77 (314)
139 3ovp_A Ribulose-phosphate 3-ep 54.7 8.7 0.0003 32.5 3.4 47 173-219 22-74 (228)
140 1nq6_A XYS1; glycoside hydrola 54.6 40 0.0014 29.3 7.8 47 171-219 185-239 (302)
141 2wkj_A N-acetylneuraminate lya 54.6 25 0.00086 30.9 6.5 76 161-249 29-113 (303)
142 1x1o_A Nicotinate-nucleotide p 54.4 17 0.00058 32.0 5.3 58 175-248 210-267 (286)
143 1r3s_A URO-D, uroporphyrinogen 54.4 77 0.0026 28.2 9.9 26 174-199 269-294 (367)
144 3na8_A Putative dihydrodipicol 54.2 33 0.0011 30.3 7.3 75 161-248 42-125 (315)
145 1rd5_A Tryptophan synthase alp 54.0 98 0.0033 26.0 10.3 142 8-221 1-155 (262)
146 3qze_A DHDPS, dihydrodipicolin 54.0 26 0.00088 31.0 6.5 76 161-249 41-125 (314)
147 3qr3_A Endoglucanase EG-II; TI 53.9 1.1E+02 0.0038 27.1 10.8 127 52-215 40-182 (340)
148 3qfe_A Putative dihydrodipicol 53.9 39 0.0013 29.9 7.7 75 161-248 29-112 (318)
149 2ehh_A DHDPS, dihydrodipicolin 53.8 27 0.00094 30.4 6.6 77 160-249 17-102 (294)
150 3eb2_A Putative dihydrodipicol 53.8 16 0.00055 32.1 5.1 75 161-248 22-105 (300)
151 3s5o_A 4-hydroxy-2-oxoglutarat 53.7 29 0.001 30.5 6.8 75 161-248 32-115 (307)
152 3m5v_A DHDPS, dihydrodipicolin 53.6 29 0.00099 30.4 6.7 76 161-249 25-110 (301)
153 2r8w_A AGR_C_1641P; APC7498, d 53.5 32 0.0011 30.7 7.1 76 161-249 52-136 (332)
154 3l21_A DHDPS, dihydrodipicolin 53.4 31 0.0011 30.3 6.9 77 161-250 33-118 (304)
155 3e96_A Dihydrodipicolinate syn 53.0 29 0.001 30.6 6.7 74 161-248 30-112 (316)
156 2nuw_A 2-keto-3-deoxygluconate 53.0 1.1E+02 0.0038 26.3 10.6 23 53-75 18-40 (288)
157 3ist_A Glutamate racemase; str 52.8 19 0.00064 31.3 5.3 32 161-192 47-80 (269)
158 1f6k_A N-acetylneuraminate lya 52.7 29 0.00098 30.3 6.5 76 161-249 21-106 (293)
159 1ta3_B Endo-1,4-beta-xylanase; 52.5 62 0.0021 28.3 8.8 50 168-219 184-242 (303)
160 4avf_A Inosine-5'-monophosphat 52.3 19 0.00065 34.0 5.6 66 171-248 231-297 (490)
161 1qop_A Tryptophan synthase alp 52.1 17 0.0006 31.2 5.0 19 171-189 34-52 (268)
162 1ydn_A Hydroxymethylglutaryl-C 52.0 18 0.00062 31.4 5.1 27 53-79 24-50 (295)
163 1a0c_A Xylose isomerase; ketol 52.0 1E+02 0.0036 28.5 10.6 73 163-237 205-285 (438)
164 3inp_A D-ribulose-phosphate 3- 51.4 12 0.00041 32.3 3.7 89 173-261 45-155 (246)
165 2hk0_A D-psicose 3-epimerase; 51.3 64 0.0022 27.4 8.6 41 162-203 145-193 (309)
166 2yv4_A Hypothetical protein PH 51.3 23 0.0008 26.2 4.9 45 162-206 53-97 (105)
167 1o5k_A DHDPS, dihydrodipicolin 51.0 31 0.0011 30.3 6.5 77 160-249 29-114 (306)
168 1xyz_A 1,4-beta-D-xylan-xylano 50.8 64 0.0022 28.7 8.7 48 169-218 210-267 (347)
169 4ed9_A CAIB/BAIF family protei 50.8 22 0.00076 32.5 5.7 40 50-94 81-120 (385)
170 2ojp_A DHDPS, dihydrodipicolin 50.7 24 0.00082 30.8 5.7 76 161-249 19-103 (292)
171 2qiw_A PEP phosphonomutase; st 50.6 83 0.0028 27.0 9.1 85 173-262 98-202 (255)
172 2hmc_A AGR_L_411P, dihydrodipi 50.1 1.4E+02 0.0048 26.6 11.5 23 53-75 45-67 (344)
173 3u0h_A Xylose isomerase domain 50.1 50 0.0017 27.3 7.5 29 162-191 116-144 (281)
174 4fxs_A Inosine-5'-monophosphat 50.0 22 0.00074 33.7 5.6 43 172-214 234-277 (496)
175 2ze3_A DFA0005; organic waste 49.7 1.3E+02 0.0044 26.1 11.2 85 174-261 98-201 (275)
176 1h7n_A 5-aminolaevulinic acid 49.7 7.8 0.00027 35.0 2.3 25 51-75 305-329 (342)
177 1pv8_A Delta-aminolevulinic ac 49.6 7.4 0.00025 35.0 2.1 25 51-75 294-318 (330)
178 1l6s_A Porphobilinogen synthas 49.5 8 0.00027 34.7 2.3 25 51-75 287-311 (323)
179 3uhf_A Glutamate racemase; str 49.2 18 0.00062 31.6 4.6 31 161-191 66-98 (274)
180 3niy_A Endo-1,4-beta-xylanase; 49.0 85 0.0029 28.1 9.2 47 168-216 203-256 (341)
181 3d0c_A Dihydrodipicolinate syn 48.9 32 0.0011 30.4 6.3 75 161-249 30-113 (314)
182 3dz1_A Dihydrodipicolinate syn 48.7 54 0.0018 28.8 7.8 75 161-248 26-108 (313)
183 2v9d_A YAGE; dihydrodipicolini 48.6 31 0.0011 31.0 6.2 76 161-249 49-133 (343)
184 1w1z_A Delta-aminolevulinic ac 48.5 8 0.00027 34.7 2.2 25 51-75 294-318 (328)
185 4ab4_A Xenobiotic reductase B; 47.4 1E+02 0.0035 27.7 9.6 75 170-259 244-321 (362)
186 2nx9_A Oxaloacetate decarboxyl 47.2 18 0.00063 34.0 4.6 86 173-264 105-197 (464)
187 3r2g_A Inosine 5'-monophosphat 47.0 27 0.00093 31.8 5.5 44 171-214 102-146 (361)
188 2ekc_A AQ_1548, tryptophan syn 46.9 15 0.00051 31.6 3.7 19 171-189 34-52 (262)
189 3hgj_A Chromate reductase; TIM 46.9 1.5E+02 0.0053 26.2 12.1 18 171-188 242-259 (349)
190 3out_A Glutamate racemase; str 46.4 21 0.00072 30.9 4.6 28 161-188 49-76 (268)
191 1ypx_A Putative vitamin-B12 in 46.4 21 0.00071 32.5 4.7 19 172-190 255-274 (375)
192 3cui_A EXO-beta-1,4-glucanase; 46.3 58 0.002 28.4 7.6 45 169-215 182-232 (315)
193 2wx3_A MRNA-decapping enzyme 1 45.9 7.9 0.00027 25.2 1.2 18 50-67 24-41 (51)
194 3obk_A Delta-aminolevulinic ac 45.8 9.2 0.00031 34.7 2.1 25 51-75 308-332 (356)
195 1qop_A Tryptophan synthase alp 45.7 1.4E+02 0.0048 25.3 9.9 33 174-207 115-147 (268)
196 1w5q_A Delta-aminolevulinic ac 45.6 11 0.00038 34.0 2.6 24 51-75 301-324 (337)
197 3m47_A Orotidine 5'-phosphate 45.5 30 0.001 29.1 5.3 33 175-207 85-117 (228)
198 3gka_A N-ethylmaleimide reduct 45.4 85 0.0029 28.3 8.6 75 170-259 252-329 (361)
199 3khj_A Inosine-5-monophosphate 45.2 33 0.0011 31.1 5.8 43 174-218 159-216 (361)
200 3ffs_A Inosine-5-monophosphate 44.2 25 0.00085 32.5 4.9 65 171-248 146-211 (400)
201 1vrd_A Inosine-5'-monophosphat 44.2 28 0.00096 32.5 5.4 66 171-248 239-305 (494)
202 3o1n_A 3-dehydroquinate dehydr 43.8 30 0.001 30.1 5.2 46 170-217 121-167 (276)
203 1z41_A YQJM, probable NADH-dep 43.6 1.7E+02 0.0058 25.7 14.5 85 161-248 134-248 (338)
204 1ps9_A 2,4-dienoyl-COA reducta 43.3 2.3E+02 0.0079 27.2 13.3 87 160-248 130-247 (671)
205 4h3d_A 3-dehydroquinate dehydr 43.1 36 0.0012 29.3 5.5 42 174-217 105-147 (258)
206 3cyv_A URO-D, UPD, uroporphyri 43.1 98 0.0033 27.3 8.7 26 174-199 256-281 (354)
207 1rpx_A Protein (ribulose-phosp 42.8 28 0.00096 28.8 4.7 48 172-220 27-79 (230)
208 2fp4_B Succinyl-COA ligase [GD 42.7 57 0.0019 29.8 7.1 66 161-239 300-370 (395)
209 1jub_A Dihydroorotate dehydrog 42.1 1.6E+02 0.0056 25.2 10.8 25 52-76 103-128 (311)
210 1z41_A YQJM, probable NADH-dep 42.1 91 0.0031 27.5 8.2 49 163-217 38-104 (338)
211 2wlt_A L-asparaginase; hydrola 42.1 44 0.0015 29.9 6.1 49 172-222 233-284 (332)
212 4af0_A Inosine-5'-monophosphat 41.9 27 0.00094 33.6 4.9 46 170-215 282-328 (556)
213 1zuw_A Glutamate racemase 1; ( 41.7 75 0.0026 27.2 7.4 31 161-191 45-78 (272)
214 3vnd_A TSA, tryptophan synthas 41.5 21 0.00071 31.1 3.7 19 170-188 34-52 (267)
215 3dx5_A Uncharacterized protein 41.3 1.5E+02 0.0051 24.5 11.9 140 54-238 47-191 (286)
216 3o1n_A 3-dehydroquinate dehydr 41.3 20 0.0007 31.2 3.7 56 162-221 50-110 (276)
217 3h5d_A DHDPS, dihydrodipicolin 40.8 1.8E+02 0.0063 25.3 12.3 45 53-103 26-71 (311)
218 1qap_A Quinolinic acid phospho 40.7 27 0.00093 30.8 4.4 61 174-250 221-281 (296)
219 3nvt_A 3-deoxy-D-arabino-heptu 40.5 64 0.0022 29.5 7.1 44 171-216 159-213 (385)
220 2hmc_A AGR_L_411P, dihydrodipi 40.4 65 0.0022 28.9 7.0 74 161-249 44-125 (344)
221 1xla_A D-xylose isomerase; iso 40.3 1.7E+02 0.0056 26.2 9.8 72 162-236 153-233 (394)
222 3h5d_A DHDPS, dihydrodipicolin 40.0 40 0.0014 29.7 5.4 76 161-249 25-110 (311)
223 3hq1_A 2-isopropylmalate synth 39.6 2.1E+02 0.0071 28.1 10.8 66 169-238 227-302 (644)
224 1eep_A Inosine 5'-monophosphat 39.3 36 0.0012 31.0 5.2 65 172-248 156-221 (404)
225 3hbl_A Pyruvate carboxylase; T 39.0 68 0.0023 33.6 7.8 64 168-238 692-758 (1150)
226 2yr1_A 3-dehydroquinate dehydr 38.5 30 0.001 29.7 4.3 54 174-227 38-97 (257)
227 2cw6_A Hydroxymethylglutaryl-C 38.3 33 0.0011 29.9 4.6 25 55-79 27-51 (298)
228 2qgh_A Diaminopimelate decarbo 38.2 43 0.0015 30.5 5.5 71 177-250 120-204 (425)
229 1rqb_A Transcarboxylase 5S sub 38.0 31 0.0011 33.2 4.6 85 174-264 123-214 (539)
230 1jub_A Dihydroorotate dehydrog 37.8 44 0.0015 28.9 5.4 49 169-218 107-167 (311)
231 4avf_A Inosine-5'-monophosphat 37.8 47 0.0016 31.2 5.8 43 174-218 284-341 (490)
232 1wky_A Endo-beta-1,4-mannanase 37.4 2.3E+02 0.0078 26.1 10.5 54 161-215 102-165 (464)
233 1icp_A OPR1, 12-oxophytodienoa 37.4 1.4E+02 0.0048 26.9 8.8 18 170-187 258-275 (376)
234 3khj_A Inosine-5-monophosphate 37.1 42 0.0014 30.3 5.2 43 171-214 107-150 (361)
235 4f8x_A Endo-1,4-beta-xylanase; 37.1 47 0.0016 29.8 5.5 47 168-216 191-245 (335)
236 1yxy_A Putative N-acetylmannos 36.9 45 0.0015 27.5 5.1 24 52-75 31-56 (234)
237 2z6i_A Trans-2-enoyl-ACP reduc 36.9 70 0.0024 28.1 6.6 77 174-260 29-106 (332)
238 1o7j_A L-asparaginase; atomic 36.9 47 0.0016 29.6 5.4 49 172-222 232-283 (327)
239 3tsm_A IGPS, indole-3-glycerol 36.7 45 0.0015 29.0 5.1 35 173-207 134-169 (272)
240 1sgj_A Citrate lyase, beta sub 36.6 38 0.0013 29.3 4.6 44 170-214 83-126 (284)
241 1vzw_A Phosphoribosyl isomeras 36.4 48 0.0017 27.4 5.2 74 173-252 89-169 (244)
242 1geq_A Tryptophan synthase alp 36.3 43 0.0015 27.8 4.9 42 172-216 99-140 (248)
243 3cc1_A BH1870 protein, putativ 36.1 35 0.0012 31.5 4.6 55 162-218 158-219 (433)
244 1f76_A Dihydroorotate dehydrog 35.8 58 0.002 28.6 5.8 78 175-254 72-177 (336)
245 1aj0_A DHPS, dihydropteroate s 35.7 83 0.0028 27.4 6.7 62 133-205 14-84 (282)
246 2qw5_A Xylose isomerase-like T 35.7 1E+02 0.0036 26.4 7.5 65 163-231 159-228 (335)
247 1i60_A IOLI protein; beta barr 35.4 1.8E+02 0.0062 23.6 8.9 41 162-203 117-164 (278)
248 1dqu_A Isocitrate lyase; beta 35.2 27 0.00093 33.6 3.7 31 180-210 387-418 (538)
249 3qc0_A Sugar isomerase; TIM ba 35.1 1.8E+02 0.0061 23.7 8.7 70 162-237 117-194 (275)
250 2xij_A Methylmalonyl-COA mutas 35.0 2.9E+02 0.01 27.6 11.2 118 100-238 585-726 (762)
251 1p1x_A Deoxyribose-phosphate a 35.0 17 0.00057 31.6 2.0 27 50-76 145-171 (260)
252 2gzm_A Glutamate racemase; enz 34.9 54 0.0018 28.0 5.3 31 161-191 45-77 (267)
253 4ew6_A D-galactose-1-dehydroge 34.9 40 0.0014 29.6 4.6 47 169-218 93-141 (330)
254 3t7v_A Methylornithine synthas 34.7 55 0.0019 28.7 5.5 74 172-253 153-241 (350)
255 1y0e_A Putative N-acetylmannos 34.7 45 0.0016 27.1 4.7 25 51-75 19-43 (223)
256 4fb5_A Probable oxidoreductase 34.6 39 0.0013 29.6 4.5 46 169-217 106-153 (393)
257 3vav_A 3-methyl-2-oxobutanoate 34.5 2.3E+02 0.0078 24.6 11.8 76 177-257 115-201 (275)
258 3ndz_A Endoglucanase D; cellot 34.5 1.8E+02 0.0062 25.4 9.0 130 53-214 40-195 (345)
259 4e3q_A Pyruvate transaminase; 34.5 1.6E+02 0.0053 27.4 8.9 47 20-66 48-98 (473)
260 1tqj_A Ribulose-phosphate 3-ep 34.3 1E+02 0.0036 25.5 7.0 48 172-220 21-73 (230)
261 2o0t_A Diaminopimelate decarbo 34.3 52 0.0018 30.5 5.5 37 179-218 130-166 (467)
262 2yr1_A 3-dehydroquinate dehydr 33.9 53 0.0018 28.2 5.1 45 170-217 102-147 (257)
263 3mwd_A ATP-citrate synthase; A 33.9 54 0.0018 30.4 5.5 79 161-250 311-402 (425)
264 1nsj_A PRAI, phosphoribosyl an 33.9 75 0.0026 26.2 5.9 30 174-203 15-50 (205)
265 3icg_A Endoglucanase D; cellul 33.8 1.5E+02 0.0052 27.6 8.8 122 53-206 43-187 (515)
266 2jfz_A Glutamate racemase; cel 33.3 47 0.0016 28.2 4.6 29 161-189 42-70 (255)
267 2a4a_A Deoxyribose-phosphate a 33.2 18 0.00063 31.8 2.0 27 50-76 167-193 (281)
268 3r79_A Uncharacterized protein 33.0 46 0.0016 28.4 4.5 64 187-251 101-167 (244)
269 3n2b_A Diaminopimelate decarbo 32.9 52 0.0018 30.3 5.2 70 178-250 140-223 (441)
270 3oqb_A Oxidoreductase; structu 32.8 40 0.0014 30.0 4.3 45 169-216 95-141 (383)
271 3uuw_A Putative oxidoreductase 32.7 43 0.0015 28.8 4.4 45 170-217 79-125 (308)
272 3o9z_A Lipopolysaccaride biosy 32.7 43 0.0015 29.2 4.4 46 169-217 84-131 (312)
273 3b8i_A PA4872 oxaloacetate dec 32.6 1.9E+02 0.0064 25.3 8.5 84 174-262 103-202 (287)
274 3pzt_A Endoglucanase; alpha/be 32.4 2.5E+02 0.0085 24.4 10.5 52 162-215 136-198 (327)
275 2gou_A Oxidoreductase, FMN-bin 32.4 2.7E+02 0.0092 24.8 12.9 76 170-259 252-335 (365)
276 2yim_A Probable alpha-methylac 32.4 57 0.002 29.4 5.3 41 49-94 59-99 (360)
277 4dpp_A DHDPS 2, dihydrodipicol 32.2 2.8E+02 0.0096 24.9 11.5 46 53-104 78-124 (360)
278 1req_A Methylmalonyl-COA mutas 32.1 3.4E+02 0.011 27.0 11.1 43 174-216 640-685 (727)
279 1dbt_A Orotidine 5'-phosphate 32.0 1.1E+02 0.0038 25.5 6.8 78 174-252 74-163 (239)
280 3c2e_A Nicotinate-nucleotide p 31.9 13 0.00046 32.7 0.9 60 178-250 216-278 (294)
281 3cpg_A Uncharacterized protein 31.8 42 0.0014 28.9 4.1 67 182-251 135-204 (282)
282 3hgj_A Chromate reductase; TIM 31.8 2.7E+02 0.0092 24.6 13.9 89 160-250 141-260 (349)
283 3bio_A Oxidoreductase, GFO/IDH 31.8 52 0.0018 28.6 4.8 45 169-216 77-124 (304)
284 3gr7_A NADPH dehydrogenase; fl 31.8 2.7E+02 0.0092 24.5 12.3 23 55-77 137-166 (340)
285 3dxi_A Putative aldolase; TIM 31.7 2.7E+02 0.0091 24.5 12.1 61 170-238 146-209 (320)
286 1lc0_A Biliverdin reductase A; 31.7 52 0.0018 28.3 4.7 46 169-217 77-124 (294)
287 3cny_A Inositol catabolism pro 31.1 1.6E+02 0.0056 24.3 7.8 72 162-237 135-208 (301)
288 1e0t_A Pyruvate kinase, PK; ph 31.0 82 0.0028 29.7 6.2 43 174-216 178-221 (470)
289 1wsa_A Asparaginase, asparagin 30.8 64 0.0022 28.7 5.3 48 172-221 230-280 (330)
290 2jfq_A Glutamate racemase; cel 30.7 66 0.0023 27.8 5.3 31 161-191 64-96 (286)
291 2vvt_A Glutamate racemase; iso 30.6 68 0.0023 27.8 5.3 32 161-192 66-97 (290)
292 2qxy_A Response regulator; reg 30.5 69 0.0024 23.1 4.7 37 178-215 45-81 (142)
293 3i09_A Periplasmic branched-ch 30.4 53 0.0018 28.4 4.7 45 170-216 184-229 (375)
294 3kru_A NADH:flavin oxidoreduct 30.3 2.9E+02 0.0099 24.5 12.8 78 160-239 132-238 (343)
295 3kws_A Putative sugar isomeras 30.3 1.5E+02 0.0052 24.5 7.5 30 161-191 139-168 (287)
296 1sfl_A 3-dehydroquinate dehydr 30.3 77 0.0026 26.7 5.5 46 170-217 85-133 (238)
297 3noy_A 4-hydroxy-3-methylbut-2 30.2 1.1E+02 0.0038 27.9 6.7 79 131-217 133-212 (366)
298 3ovp_A Ribulose-phosphate 3-ep 30.1 33 0.0011 28.8 3.1 38 174-216 80-119 (228)
299 3sy1_A UPF0001 protein YGGS; e 30.1 41 0.0014 28.6 3.7 67 182-251 98-167 (245)
300 1to3_A Putative aldolase YIHT; 30.0 74 0.0025 27.9 5.5 73 174-250 114-198 (304)
301 3ufx_B Succinyl-COA synthetase 30.0 75 0.0026 29.0 5.7 48 170-217 289-341 (397)
302 3ctl_A D-allulose-6-phosphate 29.9 28 0.00096 29.4 2.6 38 174-216 73-113 (231)
303 3e82_A Putative oxidoreductase 29.8 56 0.0019 29.0 4.7 45 169-216 79-125 (364)
304 3k30_A Histamine dehydrogenase 29.7 1.5E+02 0.005 28.8 8.1 109 146-265 30-193 (690)
305 4gxw_A Adenosine deaminase; am 29.7 1.8E+02 0.0062 26.3 8.2 32 181-214 184-215 (380)
306 2g04_A Probable fatty-acid-COA 29.6 44 0.0015 30.2 4.0 39 49-94 63-101 (359)
307 3u3x_A Oxidoreductase; structu 29.4 61 0.0021 28.7 4.9 46 169-217 100-147 (361)
308 1tx2_A DHPS, dihydropteroate s 29.1 1.4E+02 0.0049 26.1 7.2 62 133-205 39-112 (297)
309 1nns_A L-asparaginase II; amid 29.0 72 0.0025 28.4 5.3 48 172-221 226-276 (326)
310 3ip3_A Oxidoreductase, putativ 29.0 57 0.0019 28.4 4.6 40 169-211 79-120 (337)
311 1ur4_A Galactanase; hydrolase, 28.9 3.3E+02 0.011 24.7 11.3 80 167-251 140-234 (399)
312 3rpd_A Methionine synthase (B1 28.8 98 0.0033 27.8 6.2 89 163-253 166-270 (357)
313 3oix_A Putative dihydroorotate 28.8 1.4E+02 0.0046 26.8 7.1 71 171-251 144-227 (345)
314 3usb_A Inosine-5'-monophosphat 28.6 98 0.0033 29.2 6.4 44 171-214 258-302 (511)
315 3i42_A Response regulator rece 28.6 68 0.0023 22.6 4.3 38 178-216 44-84 (127)
316 2r91_A 2-keto-3-deoxy-(6-phosp 28.4 1.6E+02 0.0053 25.3 7.3 74 160-248 15-96 (286)
317 3oa2_A WBPB; oxidoreductase, s 28.4 55 0.0019 28.5 4.4 46 169-217 85-132 (318)
318 1xg4_A Probable methylisocitra 28.4 2.4E+02 0.0082 24.6 8.5 82 174-259 100-198 (295)
319 3sig_A PArg, poly(ADP-ribose) 28.4 2.9E+02 0.01 23.9 9.1 66 92-190 190-258 (277)
320 1q7e_A Hypothetical protein YF 28.3 60 0.002 30.1 4.7 40 49-93 74-113 (428)
321 4gqa_A NAD binding oxidoreduct 28.2 59 0.002 29.2 4.7 45 169-216 108-154 (412)
322 1ccw_A Protein (glutamate muta 28.2 1.4E+02 0.0049 22.5 6.3 43 175-217 48-93 (137)
323 1v5x_A PRA isomerase, phosphor 28.2 1E+02 0.0034 25.4 5.7 30 174-203 14-49 (203)
324 4had_A Probable oxidoreductase 27.9 53 0.0018 28.6 4.2 45 169-216 98-144 (350)
325 2oho_A Glutamate racemase; iso 27.9 83 0.0028 26.9 5.3 28 161-188 54-81 (273)
326 3lop_A Substrate binding perip 27.9 62 0.0021 27.9 4.6 44 170-216 185-228 (364)
327 3eul_A Possible nitrate/nitrit 27.6 60 0.002 23.9 3.9 37 179-215 59-95 (152)
328 3gr4_A Pyruvate kinase isozyme 27.5 1.4E+02 0.0049 28.6 7.3 51 161-216 240-290 (550)
329 3pff_A ATP-citrate synthase; p 27.5 67 0.0023 32.5 5.2 72 160-240 310-394 (829)
330 3ffs_A Inosine-5-monophosphate 27.5 85 0.0029 28.8 5.6 41 174-216 198-253 (400)
331 1tlt_A Putative oxidoreductase 27.4 71 0.0024 27.5 4.9 45 170-217 78-124 (319)
332 1ydo_A HMG-COA lyase; TIM-barr 27.4 55 0.0019 28.8 4.1 26 53-78 26-51 (307)
333 2e6f_A Dihydroorotate dehydrog 27.4 1.1E+02 0.0039 26.3 6.3 69 176-254 33-134 (314)
334 3f4w_A Putative hexulose 6 pho 27.3 42 0.0014 27.1 3.2 44 174-219 19-63 (211)
335 3rc1_A Sugar 3-ketoreductase; 27.3 62 0.0021 28.5 4.5 46 169-217 101-148 (350)
336 3eod_A Protein HNR; response r 27.2 66 0.0023 22.8 4.0 38 177-214 47-84 (130)
337 3ih1_A Methylisocitrate lyase; 27.0 3.2E+02 0.011 24.0 9.1 83 173-261 109-208 (305)
338 1ydw_A AX110P-like protein; st 27.0 64 0.0022 28.4 4.6 45 169-216 83-129 (362)
339 3bo9_A Putative nitroalkan dio 27.0 1.4E+02 0.0049 26.1 6.9 74 174-256 43-116 (326)
340 3vab_A Diaminopimelate decarbo 26.9 84 0.0029 29.0 5.5 69 179-250 138-220 (443)
341 2fli_A Ribulose-phosphate 3-ep 26.9 69 0.0023 25.9 4.5 40 174-216 77-116 (220)
342 2d59_A Hypothetical protein PH 26.8 83 0.0028 24.0 4.7 57 181-252 77-134 (144)
343 3s81_A Putative aspartate race 26.8 79 0.0027 27.2 5.0 24 58-81 89-112 (268)
344 3jug_A Beta-mannanase; TIM-bar 26.8 3.3E+02 0.011 24.0 9.6 54 162-216 118-181 (345)
345 1tx2_A DHPS, dihydropteroate s 26.8 3.2E+02 0.011 23.8 11.4 38 44-81 52-89 (297)
346 2dwu_A Glutamate racemase; iso 26.7 66 0.0023 27.6 4.5 29 161-189 49-77 (276)
347 1ub3_A Aldolase protein; schif 26.7 30 0.001 29.2 2.2 26 53-78 131-157 (220)
348 3hdg_A Uncharacterized protein 26.7 63 0.0021 23.1 3.8 35 179-214 49-84 (137)
349 3ezy_A Dehydrogenase; structur 26.6 67 0.0023 28.0 4.6 46 169-217 76-123 (344)
350 3igs_A N-acetylmannosamine-6-p 26.3 1.1E+02 0.0037 25.6 5.6 82 171-263 39-125 (232)
351 2nuw_A 2-keto-3-deoxygluconate 26.2 1.5E+02 0.0052 25.4 6.8 74 161-249 17-98 (288)
352 4hb7_A Dihydropteroate synthas 26.1 1.8E+02 0.0063 25.2 7.2 72 133-216 6-86 (270)
353 1ps9_A 2,4-dienoyl-COA reducta 26.0 2.3E+02 0.0079 27.2 8.7 49 163-217 36-102 (671)
354 4e7p_A Response regulator; DNA 25.8 73 0.0025 23.4 4.1 38 177-214 62-99 (150)
355 1tqx_A D-ribulose-5-phosphate 25.8 1.2E+02 0.0041 25.4 5.8 48 173-220 23-75 (227)
356 2whl_A Beta-mannanase, baman5; 25.7 3E+02 0.01 23.1 8.6 71 133-215 77-157 (294)
357 1zco_A 2-dehydro-3-deoxyphosph 25.6 87 0.003 26.9 5.0 45 170-216 39-94 (262)
358 3k2g_A Resiniferatoxin-binding 25.6 1.9E+02 0.0066 25.8 7.6 28 49-76 80-107 (364)
359 3ezx_A MMCP 1, monomethylamine 25.5 59 0.002 27.0 3.8 43 175-217 137-185 (215)
360 3aam_A Endonuclease IV, endoiv 25.5 2.7E+02 0.0094 22.6 9.8 37 164-201 115-160 (270)
361 1vjz_A Endoglucanase; TM1752, 25.5 3.2E+02 0.011 23.4 10.6 54 162-215 121-188 (341)
362 3tdn_A FLR symmetric alpha-bet 25.4 30 0.001 28.9 2.0 19 57-75 37-55 (247)
363 1vhn_A Putative flavin oxidore 25.4 51 0.0017 28.9 3.6 67 179-254 26-95 (318)
364 3f6c_A Positive transcription 25.4 66 0.0023 22.9 3.7 35 179-214 44-79 (134)
365 2p2s_A Putative oxidoreductase 25.3 66 0.0023 27.9 4.3 45 169-216 78-124 (336)
366 1a3w_A Pyruvate kinase; allost 25.2 74 0.0025 30.2 4.8 43 174-216 199-241 (500)
367 2yxb_A Coenzyme B12-dependent 25.2 1E+02 0.0034 24.2 5.0 43 175-217 63-108 (161)
368 4pga_A Glutaminase-asparaginas 25.1 80 0.0027 28.3 4.8 45 172-218 236-283 (337)
369 1tqj_A Ribulose-phosphate 3-ep 25.0 88 0.003 26.0 4.9 41 173-216 77-119 (230)
370 3dty_A Oxidoreductase, GFO/IDH 25.0 71 0.0024 28.6 4.6 47 169-218 97-145 (398)
371 2duw_A Putative COA-binding pr 24.7 67 0.0023 24.7 3.8 58 181-252 70-127 (145)
372 3nxk_A Cytoplasmic L-asparagin 24.7 90 0.0031 27.9 5.1 48 172-221 236-286 (334)
373 3f4l_A Putative oxidoreductase 24.7 70 0.0024 27.9 4.4 44 170-216 78-123 (345)
374 3obe_A Sugar phosphate isomera 24.7 2.3E+02 0.0077 24.1 7.7 29 162-191 144-172 (305)
375 1h1y_A D-ribulose-5-phosphate 24.6 67 0.0023 26.5 4.0 48 172-220 23-75 (228)
376 3e18_A Oxidoreductase; dehydro 24.6 77 0.0026 28.0 4.7 44 170-216 78-123 (359)
377 3l23_A Sugar phosphate isomera 24.5 2E+02 0.0067 24.4 7.2 31 161-191 137-168 (303)
378 2pcq_A Putative dihydrodipicol 24.4 1.2E+02 0.0042 26.0 5.8 71 161-248 16-94 (283)
379 3ohs_X Trans-1,2-dihydrobenzen 24.3 84 0.0029 27.2 4.8 46 169-217 78-125 (334)
380 3c1a_A Putative oxidoreductase 24.2 81 0.0028 27.1 4.6 44 170-216 82-127 (315)
381 1vfs_A Alanine racemase; TIM-b 24.2 60 0.002 29.1 3.9 60 188-250 102-167 (386)
382 1nvm_A HOA, 4-hydroxy-2-oxoval 24.2 55 0.0019 29.2 3.6 83 174-264 99-188 (345)
383 1i4n_A Indole-3-glycerol phosp 24.1 1.2E+02 0.0039 26.0 5.5 35 173-207 115-150 (251)
384 3hv2_A Response regulator/HD d 24.1 81 0.0028 23.2 4.1 36 178-214 55-91 (153)
385 3inp_A D-ribulose-phosphate 3- 24.0 28 0.00094 29.9 1.5 38 174-216 102-141 (246)
386 3kht_A Response regulator; PSI 24.0 97 0.0033 22.3 4.5 38 178-215 48-87 (144)
387 3ojc_A Putative aspartate/glut 24.0 1.2E+02 0.0042 25.1 5.6 30 162-191 57-86 (231)
388 1xea_A Oxidoreductase, GFO/IDH 24.0 96 0.0033 26.7 5.1 46 170-218 76-123 (323)
389 1w3i_A EDA, 2-keto-3-deoxy glu 24.0 1.7E+02 0.0058 25.2 6.7 73 161-248 17-97 (293)
390 3snr_A Extracellular ligand-bi 24.0 74 0.0025 27.0 4.3 40 172-213 181-220 (362)
391 3b0p_A TRNA-dihydrouridine syn 24.0 38 0.0013 30.3 2.5 65 180-254 27-95 (350)
392 2rjn_A Response regulator rece 23.9 82 0.0028 23.1 4.1 36 178-214 48-84 (154)
393 1zh8_A Oxidoreductase; TM0312, 23.8 88 0.003 27.3 4.8 46 169-217 94-141 (340)
394 2csu_A 457AA long hypothetical 23.8 1.2E+02 0.004 28.2 5.9 50 168-217 354-411 (457)
395 2him_A L-asparaginase 1; hydro 23.7 88 0.003 28.2 4.9 48 172-221 244-296 (358)
396 1agx_A Glutaminase-asparaginas 23.7 92 0.0031 27.7 4.9 48 172-221 230-281 (331)
397 3ru6_A Orotidine 5'-phosphate 23.7 1.9E+02 0.0067 25.4 7.0 41 175-216 97-137 (303)
398 1ujp_A Tryptophan synthase alp 23.7 65 0.0022 27.8 3.8 81 173-260 35-137 (271)
399 3ubm_A COAT2, formyl-COA:oxala 23.6 96 0.0033 29.0 5.2 40 50-94 99-138 (456)
400 3tfx_A Orotidine 5'-phosphate 23.5 1.7E+02 0.006 25.0 6.6 77 175-251 77-164 (259)
401 1tmy_A CHEY protein, TMY; chem 23.5 1E+02 0.0035 21.2 4.4 34 180-214 46-80 (120)
402 1jcn_A Inosine monophosphate d 23.3 1.4E+02 0.0046 28.0 6.3 44 171-214 257-301 (514)
403 3gr7_A NADPH dehydrogenase; fl 23.3 3.8E+02 0.013 23.5 13.1 86 160-248 133-248 (340)
404 2ho3_A Oxidoreductase, GFO/IDH 23.1 91 0.0031 26.8 4.8 44 170-216 75-120 (325)
405 3eoo_A Methylisocitrate lyase; 23.0 3.2E+02 0.011 23.9 8.3 84 174-261 104-204 (298)
406 2v82_A 2-dehydro-3-deoxy-6-pho 23.0 95 0.0032 25.0 4.6 41 171-214 22-62 (212)
407 1h5y_A HISF; histidine biosynt 22.9 75 0.0026 25.9 4.0 77 174-253 92-178 (253)
408 3gdo_A Uncharacterized oxidore 22.9 81 0.0028 27.8 4.4 45 169-216 77-123 (358)
409 3fhl_A Putative oxidoreductase 22.9 87 0.003 27.6 4.7 46 169-217 77-124 (362)
410 3v5n_A Oxidoreductase; structu 22.7 90 0.0031 28.2 4.8 47 169-218 122-170 (417)
411 3m2t_A Probable dehydrogenase; 22.6 85 0.0029 27.7 4.5 46 169-217 80-127 (359)
412 1eye_A DHPS 1, dihydropteroate 22.6 1.9E+02 0.0064 25.1 6.6 62 133-205 5-75 (280)
413 3nco_A Endoglucanase fncel5A; 22.6 3.5E+02 0.012 22.9 9.4 52 163-215 116-177 (320)
414 3td9_A Branched chain amino ac 22.5 1E+02 0.0035 26.4 5.0 40 172-213 195-234 (366)
415 4dnh_A Uncharacterized protein 22.4 1.9E+02 0.0066 26.2 6.6 28 161-188 130-157 (396)
416 1f76_A Dihydroorotate dehydrog 22.4 1.2E+02 0.004 26.5 5.4 77 165-248 150-244 (336)
417 3kto_A Response regulator rece 22.4 63 0.0022 23.3 3.1 38 178-215 47-86 (136)
418 3nav_A Tryptophan synthase alp 22.4 75 0.0026 27.5 4.0 19 170-188 36-54 (271)
419 3ipc_A ABC transporter, substr 22.3 86 0.0029 26.7 4.4 42 170-213 182-223 (356)
420 1nth_A Monomethylamine methylt 22.2 1.2E+02 0.004 28.2 5.2 16 129-146 119-134 (458)
421 1eix_A Orotidine 5'-monophosph 22.2 1.4E+02 0.0047 25.0 5.6 84 174-259 85-176 (245)
422 3vk5_A MOEO5; TIM barrel, tran 22.1 92 0.0031 27.4 4.4 43 173-216 58-103 (286)
423 3b2n_A Uncharacterized protein 22.1 87 0.003 22.4 3.8 34 180-214 48-82 (133)
424 3jr2_A Hexulose-6-phosphate sy 22.0 82 0.0028 25.8 4.0 34 174-207 76-109 (218)
425 3jte_A Response regulator rece 22.0 96 0.0033 22.3 4.1 35 180-214 48-82 (143)
426 2j48_A Two-component sensor ki 22.0 1.1E+02 0.0038 20.6 4.3 36 180-215 44-81 (119)
427 2c6q_A GMP reductase 2; TIM ba 22.0 96 0.0033 27.7 4.7 14 174-187 175-188 (351)
428 7a3h_A Endoglucanase; hydrolas 21.8 3.7E+02 0.013 22.8 10.3 52 162-215 111-174 (303)
429 4eiv_A Deoxyribose-phosphate a 21.7 46 0.0016 29.5 2.4 27 50-76 161-187 (297)
430 2hsa_B 12-oxophytodienoate red 21.7 4.5E+02 0.015 23.7 12.8 21 56-76 165-192 (402)
431 1dbt_A Orotidine 5'-phosphate 21.7 56 0.0019 27.4 3.0 30 50-79 63-92 (239)
432 3cnb_A DNA-binding response re 21.7 1.1E+02 0.0037 21.8 4.3 37 179-215 52-90 (143)
433 4e4r_A Phosphate acetyltransfe 21.6 1.2E+02 0.004 27.0 5.2 123 6-148 2-137 (331)
434 2c6q_A GMP reductase 2; TIM ba 21.6 1.2E+02 0.004 27.2 5.2 65 172-248 121-188 (351)
435 3l5a_A NADH/flavin oxidoreduct 21.6 4.6E+02 0.016 23.8 9.6 18 170-187 266-284 (419)
436 3hut_A Putative branched-chain 21.5 84 0.0029 26.8 4.2 39 173-213 186-224 (358)
437 4gnr_A ABC transporter substra 21.4 1E+02 0.0035 26.3 4.7 44 170-215 185-228 (353)
438 3hqn_D Pyruvate kinase, PK; TI 21.3 1.2E+02 0.0042 28.7 5.5 51 161-216 190-240 (499)
439 4ef8_A Dihydroorotate dehydrog 21.3 74 0.0025 28.7 3.8 36 209-253 126-166 (354)
440 2vws_A YFAU, 2-keto-3-deoxy su 21.1 73 0.0025 27.3 3.6 32 173-204 82-113 (267)
441 3rys_A Adenosine deaminase 1; 21.1 3.6E+02 0.012 23.8 8.4 28 180-207 166-193 (343)
442 3mfq_A TROA, high-affinity zin 21.0 1.3E+02 0.0044 25.9 5.2 48 161-214 196-243 (282)
443 3ldv_A Orotidine 5'-phosphate 21.0 3E+02 0.01 23.4 7.6 77 175-251 99-182 (255)
444 3ngf_A AP endonuclease, family 21.0 3.4E+02 0.012 22.1 9.4 41 162-203 125-175 (269)
445 1vrd_A Inosine-5'-monophosphat 21.0 1.4E+02 0.0049 27.6 5.9 40 175-216 293-347 (494)
446 3c01_A Surface presentation of 21.0 60 0.0021 20.7 2.3 20 56-75 22-48 (48)
447 3pzs_A PM kinase, pyridoxamine 20.9 2.6E+02 0.009 23.6 7.3 46 160-206 56-102 (289)
448 1sfl_A 3-dehydroquinate dehydr 20.9 70 0.0024 27.0 3.4 44 177-221 26-74 (238)
449 3nvt_A 3-deoxy-D-arabino-heptu 20.9 4.7E+02 0.016 23.6 9.3 30 49-78 150-179 (385)
450 2ftp_A Hydroxymethylglutaryl-C 20.7 1.8E+02 0.0061 25.1 6.1 26 53-78 28-53 (302)
451 3ajx_A 3-hexulose-6-phosphate 20.6 1.1E+02 0.0038 24.4 4.5 40 175-216 71-110 (207)
452 4gmf_A Yersiniabactin biosynth 20.6 99 0.0034 27.8 4.6 46 170-218 83-128 (372)
453 3apt_A Methylenetetrahydrofola 20.5 4.2E+02 0.014 23.0 9.0 82 101-216 127-208 (310)
454 1u1j_A 5-methyltetrahydroptero 20.4 1.2E+02 0.0042 30.2 5.5 85 162-256 180-275 (765)
455 3qll_A Citrate lyase; beta bar 20.4 1E+02 0.0035 27.2 4.5 44 172-215 118-163 (316)
456 2pl1_A Transcriptional regulat 20.4 1.2E+02 0.0041 20.8 4.2 35 179-214 42-77 (121)
457 1ujp_A Tryptophan synthase alp 20.3 73 0.0025 27.5 3.4 33 174-207 112-144 (271)
458 3l5l_A Xenobiotic reductase A; 20.3 4.5E+02 0.015 23.2 13.6 89 160-250 147-267 (363)
459 2xz9_A Phosphoenolpyruvate-pro 20.3 89 0.0031 27.7 4.1 38 167-204 118-161 (324)
460 1yx1_A Hypothetical protein PA 20.3 2.3E+02 0.008 23.1 6.7 61 172-237 116-181 (264)
461 3qtg_A Pyruvate kinase, PK; TI 20.3 1.6E+02 0.0055 27.6 6.0 49 161-214 179-229 (461)
462 2jfn_A Glutamate racemase; cel 20.3 1.4E+02 0.0047 25.7 5.3 30 161-190 63-93 (285)
463 3grc_A Sensor protein, kinase; 20.3 97 0.0033 22.2 3.8 36 178-214 47-85 (140)
464 2vws_A YFAU, 2-keto-3-deoxy su 20.3 1.5E+02 0.0051 25.2 5.5 42 174-217 32-76 (267)
465 3ctl_A D-allulose-6-phosphate 20.2 2.1E+02 0.0072 23.8 6.3 46 173-220 18-68 (231)
466 4gj1_A 1-(5-phosphoribosyl)-5- 20.2 1.5E+02 0.005 24.9 5.3 75 174-251 90-173 (243)
467 1zcz_A Bifunctional purine bio 20.1 85 0.0029 29.5 4.0 61 189-251 209-273 (464)
468 1vkf_A Glycerol uptake operon 20.1 48 0.0017 27.3 2.1 23 50-77 157-179 (188)
469 3a10_A Response regulator; pho 20.1 1.1E+02 0.0039 20.8 4.0 35 179-214 43-78 (116)
470 2r14_A Morphinone reductase; H 20.0 3.3E+02 0.011 24.4 8.0 85 163-248 161-274 (377)
No 1
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=3.6e-55 Score=413.28 Aligned_cols=220 Identities=22% Similarity=0.308 Sum_probs=189.3
Q ss_pred chhHHHHHHHhcCCeEEeecchhhhHhhhCCCCCCccccccccccCchhHHHHhhhhhhccccEEEechhhhhhhhhhcc
Q 024544 8 TTSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAK 87 (266)
Q Consensus 8 ~~~~l~~~l~~~~~~lllDGg~gT~L~~~g~~~~~~lws~~~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~ 87 (266)
+.+.|.+.|++ ++++||||||||+|+++|++. .++|++.+++++||.|++||++|++||||||+||||++|+.+|.++
T Consensus 9 ~~~~l~~~L~~-~~ilIlDGgmGT~L~~~G~~~-~~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~ 86 (406)
T 1lt8_A 9 AKKGILERLNA-GEIVIGDGGFVFALEKRGYVK-AGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENR 86 (406)
T ss_dssp --CCHHHHHHT-TCCEECCCCHHHHHHHHTSSC-TTTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC----
T ss_pred chHHHHHHHhc-CCEEEEeCccchHHHHCCCCC-CcccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHhc
Confidence 44568999982 359999999999999999976 3589999999999999999999999999999999999999999999
Q ss_pred CCCH---HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccccceEEEEecccccceecCCCccccCCCCchhHH
Q 024544 88 GFST---EEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLE 164 (266)
Q Consensus 88 g~~~---~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~ 164 (266)
|++. +++++||++||+|||+|+++ .+++|||||||+|.++. .++++
T Consensus 87 G~~~~~~~~~~eln~~Av~LAreAa~~--------------------~~~~VAGsIGP~g~~l~-----------~~s~e 135 (406)
T 1lt8_A 87 GNYVLEKISGQEVNEAAADIARQVADE--------------------GDALVAGGVSQTPSYLS-----------AKSET 135 (406)
T ss_dssp ---------CHHHHHHHHHHHHHHHTT--------------------TTCEEEEEECCCHHHHT-----------TCHHH
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHhc--------------------CCCEEEEEcCCcccccC-----------CCCHH
Confidence 9742 45789999999999999742 25899999999998552 37899
Q ss_pred HHHHHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhh
Q 024544 165 TLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVV 244 (266)
Q Consensus 165 e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~ 244 (266)
+++++|++|+++|+++|||+|++|||+++.|++++++++++.+ +|||+||+|.++|+ ++|+++++++..+.+ .+++
T Consensus 136 el~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~--lPv~iS~T~~~~G~-l~G~~~~~~~~~l~~-~~~~ 211 (406)
T 1lt8_A 136 EVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASG--KPVAATMAIGPEGD-LHGVPPGEAAVRLVK-AGAS 211 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGGGT--SCEEEEECCBTTBC-TTCCCHHHHHHHHHT-TTCS
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHHhC--CcEEEEEEECCCCC-cCCCcHHHHHHHhhc-CCCC
Confidence 9999999999999999999999999999999999999999865 99999999988888 899999999988876 4799
Q ss_pred hcccccC-Ccchhhhhheeee
Q 024544 245 AVGINCT-SPRFIHGLILSVR 264 (266)
Q Consensus 245 avGiNC~-~p~~~~~~l~~l~ 264 (266)
+|||||+ +|+.|.++|+.++
T Consensus 212 avGvNC~~gP~~~~~~l~~l~ 232 (406)
T 1lt8_A 212 IIGVNCHFDPTISLKTVKLMK 232 (406)
T ss_dssp EEEEESSSCHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHH
Confidence 9999997 8999999998775
No 2
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=3.7e-53 Score=415.03 Aligned_cols=217 Identities=25% Similarity=0.371 Sum_probs=198.2
Q ss_pred hHHHHHHHhcCCeEEeecchhhhHhhhCCCCCCccccccccccCchhHHHHhhhhhhccccEEEechhhhhhhhhhccCC
Q 024544 10 SFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGF 89 (266)
Q Consensus 10 ~~l~~~l~~~~~~lllDGg~gT~L~~~g~~~~~~lws~~~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~ 89 (266)
..|++.|+ ++++||||||||+|+++|++...++|+ +++||+|+++|++|++||||||+|||||+|+.+|.++|+
T Consensus 5 ~~l~~~l~--~~ililDGamGT~L~~~g~~~~~el~~----l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~~g~ 78 (566)
T 1q7z_A 5 REVSKLLS--ERVLLLDGAYGTEFMKYGYDDLPEELN----IKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLRKHGL 78 (566)
T ss_dssp HHHHHHHH--HCCEECCCCSHHHHHHTTCCSCGGGHH----HHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHGGGTC
T ss_pred hHHHHHHc--CCeEEEEChHHHHHHHCCCCCCchhhc----ccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHHhcCc
Confidence 46888887 689999999999999999988788996 899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccccceEEEEecccccceecCCCccccCCCCchhHHHHHHH
Q 024544 90 STEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEF 169 (266)
Q Consensus 90 ~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~ 169 (266)
+ ++++++|++|+++||+|++ . + +|||||||+|.++. .|+ .+++++++++
T Consensus 79 ~-~~~~el~~~av~lAr~a~~--------------------~-~-~VAGsiGP~g~~~~-------~~~-~~~~~e~~~~ 127 (566)
T 1q7z_A 79 E-DKLDPIVRNAVRIARRAAG--------------------E-K-LVFGDIGPTGELPY-------PLG-STLFEEFYEN 127 (566)
T ss_dssp G-GGHHHHHHHHHHHHHHHHT--------------------T-S-EEEEEECCCSCCBT-------TTS-SBCHHHHHHH
T ss_pred h-HHHHHHHHHHHHHHHHHHh--------------------C-C-eEEEeCCCcccCCC-------CCC-CCCHHHHHHH
Confidence 7 6799999999999999972 2 3 99999999998652 244 3799999999
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhcccc
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiN 249 (266)
|++|+++|+++|||+|++||||++.|++++++++++...++|+|+||++.++|++++|+++++++..+.+ .++++||+|
T Consensus 128 ~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~-~~~~avG~N 206 (566)
T 1q7z_A 128 FRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDE-LDIDALGIN 206 (566)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHT-SSCSEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhc-cCCCEEEEe
Confidence 9999999999999999999999999999999999985336999999999999999999999999998887 579999999
Q ss_pred cC-Ccchhhhhheeee
Q 024544 250 CT-SPRFIHGLILSVR 264 (266)
Q Consensus 250 C~-~p~~~~~~l~~l~ 264 (266)
|+ +|++|.++|+.++
T Consensus 207 C~~gp~~~~~~l~~l~ 222 (566)
T 1q7z_A 207 CSLGPEEILPIFQELS 222 (566)
T ss_dssp SSSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 96 8999999998764
No 3
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=95.84 E-value=0.094 Score=47.06 Aligned_cols=41 Identities=20% Similarity=0.385 Sum_probs=34.8
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
+|++++.++|+|+|++|.+++.+|++.+++.+. +|+++..+
T Consensus 175 ~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~-----~Pl~~n~~ 215 (298)
T 3eoo_A 175 ERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK-----VPILANLT 215 (298)
T ss_dssp HHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC-----SCBEEECC
T ss_pred HHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC-----CCeEEEec
Confidence 478899999999999999999999999988764 67766554
No 4
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=95.71 E-value=0.16 Score=45.81 Aligned_cols=42 Identities=24% Similarity=0.231 Sum_probs=35.6
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
+|++++.++|+|.|++|-+++.+|++.+++.+. ++|+++.+.
T Consensus 182 ~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~----~~Pv~~n~~ 223 (307)
T 3lye_A 182 ERLRAARDEGADVGLLEGFRSKEQAAAAVAALA----PWPLLLNSV 223 (307)
T ss_dssp HHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT----TSCBEEEEE
T ss_pred HHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc----CCceeEEee
Confidence 478889999999999999999999999998876 267776554
No 5
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=95.32 E-value=0.09 Score=47.10 Aligned_cols=41 Identities=17% Similarity=0.344 Sum_probs=34.3
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
++++++.++|+|+|++|.+|+.++++.+.+.++ +|+++..+
T Consensus 171 ~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----iP~~~N~~ 211 (295)
T 1xg4_A 171 ERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ-----VPILANIT 211 (295)
T ss_dssp HHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC-----SCBEEECC
T ss_pred HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-----CCEEEEec
Confidence 478889999999999999999999999988764 67765554
No 6
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=94.70 E-value=0.55 Score=42.12 Aligned_cols=42 Identities=21% Similarity=0.245 Sum_probs=34.6
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
+|++++.++|+|.|++|-+.+.+|++.+++.++. +|+.+.+.
T Consensus 174 ~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~~----~Pl~~n~~ 215 (302)
T 3fa4_A 174 ARLRAARDAGADVGFLEGITSREMARQVIQDLAG----WPLLLNMV 215 (302)
T ss_dssp HHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTTT----SCEEEECC
T ss_pred HHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhcC----CceeEEEe
Confidence 4788999999999999999999999998887752 56665543
No 7
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=94.59 E-value=0.28 Score=44.39 Aligned_cols=42 Identities=21% Similarity=0.080 Sum_probs=34.5
Q ss_pred hhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
-++++++.++|+|.|++|.+++.+|++.+.+.+. +|+.+.++
T Consensus 192 i~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~-----~P~lan~~ 233 (318)
T 1zlp_A 192 IRRANLYKEAGADATFVEAPANVDELKEVSAKTK-----GLRIANMI 233 (318)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHSC-----SEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhcC-----CCEEEEec
Confidence 3478899999999999999999999999888764 67765443
No 8
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=94.19 E-value=0.97 Score=42.45 Aligned_cols=32 Identities=38% Similarity=0.377 Sum_probs=28.8
Q ss_pred hhHHhhhcCCCeEEeecc-chhhhHHHHHHHHhh
Q 024544 173 RVLILANSGADLIAFETI-PNKLEAKAYAELLEE 205 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~ 205 (266)
|..++.+ |+|+|++|+. ++++|++.+++.++.
T Consensus 276 Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~ 308 (435)
T 3lg3_A 276 RGLAYAP-YADLVWCETSTPDLALAKRFADAVHA 308 (435)
T ss_dssp HHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhcc
Confidence 6778888 9999999996 799999999999986
No 9
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=94.11 E-value=0.6 Score=41.75 Aligned_cols=130 Identities=20% Similarity=0.209 Sum_probs=74.1
Q ss_pred hhhhccccEEEechhhhhhhh-hhccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccccceEEEEecc
Q 024544 63 DYLDAGANIIITASYQATIQG-FEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVG 141 (266)
Q Consensus 63 ~Yl~AGAdiI~TnTy~a~~~~-l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiG 141 (266)
.-+++|+++|.... .+|... ....+.+.++..+.....++.|++. +. .|-+.+.
T Consensus 89 ~a~~~g~~~v~i~~-~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~----------------------G~--~v~~~i~ 143 (307)
T 1ydo_A 89 NALEGGINEACVFM-SASETHNRKNINKSTSESLHILKQVNNDAQKA----------------------NL--TTRAYLS 143 (307)
T ss_dssp HHHHHTCSEEEEEE-ESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHT----------------------TC--EEEEEEE
T ss_pred HHHhCCcCEEEEEe-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC----------------------CC--EEEEEEE
Confidence 34678999877654 233222 2334566555555555555555542 22 2333332
Q ss_pred c-ccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEee-c--cchhhhHHHHHHHHhhcCcccc-cceee
Q 024544 142 S-YGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITIP-AWFSF 216 (266)
Q Consensus 142 P-~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~P-v~iSf 216 (266)
- ++. ||.+. .+.+ ++.+.++.+.+.|+|.|.+= | +..+.++...++.+++. .| +-++|
T Consensus 144 ~~~~~------~~~~~----~~~~----~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~---~~~~~l~~ 206 (307)
T 1ydo_A 144 TVFGC------PYEKD----VPIE----QVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLAR---FPANQIAL 206 (307)
T ss_dssp CTTCB------TTTBC----CCHH----HHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTT---SCGGGEEE
T ss_pred EEecC------CcCCC----CCHH----HHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHh---CCCCeEEE
Confidence 2 221 33333 2443 45556677888899988665 3 34677888888888863 33 56788
Q ss_pred ecCCCceeecCchHHHhhhHHh
Q 024544 217 NSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 217 ~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
-+.++ .|..+..++..++
T Consensus 207 H~Hnd----~Gla~AN~laAv~ 224 (307)
T 1ydo_A 207 HFHDT----RGTALANMVTALQ 224 (307)
T ss_dssp ECBGG----GSCHHHHHHHHHH
T ss_pred EECCC----CchHHHHHHHHHH
Confidence 77665 4666666655554
No 10
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=93.90 E-value=0.74 Score=43.23 Aligned_cols=32 Identities=34% Similarity=0.399 Sum_probs=28.8
Q ss_pred hhHHhhhcCCCeEEeec-cchhhhHHHHHHHHhh
Q 024544 173 RVLILANSGADLIAFET-IPNKLEAKAYAELLEE 205 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~ 205 (266)
|..++.+ |+|+|++|| .++++|++.+++.++.
T Consensus 272 Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~ 304 (429)
T 1f8m_A 272 RAKAYAP-FADLIWMETGTPDLEAARQFSEAVKA 304 (429)
T ss_dssp HHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcc
Confidence 6678887 899999998 8999999999999985
No 11
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=93.83 E-value=0.78 Score=43.17 Aligned_cols=32 Identities=44% Similarity=0.402 Sum_probs=28.9
Q ss_pred hhHHhhhcCCCeEEeec-cchhhhHHHHHHHHhh
Q 024544 173 RVLILANSGADLIAFET-IPNKLEAKAYAELLEE 205 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~ 205 (266)
|..++.+ |+|+|++|+ .++++|++.++++++.
T Consensus 276 Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~ 308 (439)
T 3i4e_A 276 RGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHK 308 (439)
T ss_dssp HHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcc
Confidence 6778887 999999999 6899999999999986
No 12
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=93.41 E-value=1.7 Score=40.76 Aligned_cols=32 Identities=34% Similarity=0.478 Sum_probs=28.9
Q ss_pred hhHHhhhcCCCeEEeecc-chhhhHHHHHHHHhh
Q 024544 173 RVLILANSGADLIAFETI-PNKLEAKAYAELLEE 205 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~ 205 (266)
|..++.+ |+|+|++|+. ++++|++.+++.++.
T Consensus 271 Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~ 303 (433)
T 3eol_A 271 RAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHK 303 (433)
T ss_dssp HHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcc
Confidence 6778888 9999999996 899999999999985
No 13
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.77 E-value=2.1 Score=37.75 Aligned_cols=64 Identities=14% Similarity=0.020 Sum_probs=42.0
Q ss_pred HhhhhhHHhhhcCCCeEEee-cc--chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 169 FHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
++.+.++.+.+.|+|.|.+= |+ ..+.++..+++.+++.-++ +-++|-+.++ .|..+..++..+.
T Consensus 157 ~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~--~~i~~H~Hn~----~Gla~An~laA~~ 223 (298)
T 2cw6_A 157 KVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPL--AALAVHCHDT----YGQALANTLMALQ 223 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCG--GGEEEEEBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCC--CeEEEEECCC----CchHHHHHHHHHH
Confidence 44456677888999988544 43 4577888888888864212 5577877766 4666666555554
No 14
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=92.51 E-value=1 Score=39.68 Aligned_cols=33 Identities=30% Similarity=0.306 Sum_probs=29.5
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHHh
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLE 204 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~ 204 (266)
++++++.++|+|.|++|.+|+.+|++.+.+.++
T Consensus 172 ~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 172 RRGQAYADAGADGIFVPLALQSQDIRALADALR 204 (275)
T ss_dssp HHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcC
Confidence 478899999999999999999999999888764
No 15
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=92.29 E-value=1.9 Score=38.22 Aligned_cols=131 Identities=14% Similarity=0.078 Sum_probs=72.5
Q ss_pred hhhccccEEEechhhhhhhh-hhccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccccceEEEEeccc
Q 024544 64 YLDAGANIIITASYQATIQG-FEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGS 142 (266)
Q Consensus 64 Yl~AGAdiI~TnTy~a~~~~-l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP 142 (266)
-+++|++.|.... .+|... ....+.+.++.-+..+..|+.|++. .+.|-+.|+-
T Consensus 92 a~~aG~~~v~i~~-~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~------------------------G~~V~~~l~~ 146 (302)
T 2ftp_A 92 ALESGVKEVAVFA-AASEAFSQRNINCSIKDSLERFVPVLEAARQH------------------------QVRVRGYISC 146 (302)
T ss_dssp HHHTTCCEEEEEE-ESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHT------------------------TCEEEEEEEC
T ss_pred HHhCCcCEEEEEE-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC------------------------CCeEEEEEEE
Confidence 4568999776532 122211 1223556555555555555555542 2345555554
Q ss_pred ccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeec---cchhhhHHHHHHHHhhcCcccccceeeecC
Q 024544 143 YGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPNKLEAKAYAELLEEEGITIPAWFSFNSK 219 (266)
Q Consensus 143 ~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET---~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~ 219 (266)
... .||.+. .+.+++.+ .++.+.+.|+|.|.+=+ +..+.+....++.+++.-++ +-++|-+.
T Consensus 147 ~~~-----~e~~~~----~~~~~~~~----~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~--~~l~~H~H 211 (302)
T 2ftp_A 147 VLG-----CPYDGD----VDPRQVAW----VARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPR--ERLAGHFH 211 (302)
T ss_dssp TTC-----BTTTBC----CCHHHHHH----HHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCG--GGEEEEEB
T ss_pred Eee-----CCcCCC----CCHHHHHH----HHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCC--CeEEEEeC
Confidence 211 133332 34554444 55667788999997663 23566777777777763212 45677766
Q ss_pred CCceeecCchHHHhhhHHh
Q 024544 220 DGINVVSGDSILECASIAD 238 (266)
Q Consensus 220 ~~~~l~~G~~~~~a~~~~~ 238 (266)
++ .|..+..+...++
T Consensus 212 n~----~Gla~An~laAv~ 226 (302)
T 2ftp_A 212 DT----YGQALANIYASLL 226 (302)
T ss_dssp CT----TSCHHHHHHHHHH
T ss_pred CC----ccHHHHHHHHHHH
Confidence 55 5777776666554
No 16
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=91.86 E-value=2.2 Score=39.13 Aligned_cols=67 Identities=12% Similarity=0.099 Sum_probs=45.4
Q ss_pred HHhhhhhHHhhhcCCCeEEee-c--cchhhhHHHHHHHHhhcCccc-ccceeeecCCCceeecCchHHHhhhHHh
Q 024544 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITI-PAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~-Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+|+.+.++.+.++|+|.|.+= | +..+.++..+++.+++.-++. .+.+++-+.++ .|..+..++..+.
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd----~GlAvAN~laAv~ 227 (370)
T 3rmj_A 157 DFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHND----LGLAVANSLAALK 227 (370)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCC----CChHHHHHHHHHH
Confidence 456667788889999988665 4 345778888888888642111 17789988876 4665665555444
No 17
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=91.78 E-value=0.098 Score=48.01 Aligned_cols=80 Identities=19% Similarity=0.334 Sum_probs=51.8
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCC------------ceeecC-----chHHH
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG------------INVVSG-----DSILE 232 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~------------~~l~~G-----~~~~~ 232 (266)
-..|+..|.++|+|++=+ |+|+.++++++-+ +++. .++|++.-+.|+.. -++..| .-+.+
T Consensus 48 tv~Qi~~l~~aG~diVRv-avp~~~~a~al~~-I~~~-~~vPlvaDiHf~~~lal~a~e~G~dklRINPGNig~~~~~~~ 124 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRV-AVPHKEDVEALEE-IVKK-SPMPVIADIHFAPSYAFLSMEKGVHGIRINPGNIGKEEIVRE 124 (366)
T ss_dssp HHHHHHHHHHTTCCEEEE-ECCSHHHHHHHHH-HHHH-CSSCEEEECCSCHHHHHHHHHTTCSEEEECHHHHSCHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEe-CCCChHHHHHHHH-HHhc-CCCCEEEeCCCCHHHHHHHHHhCCCeEEECCcccCchhHHHH
Confidence 344899999999999987 8999777655554 5443 25899888766431 122222 12345
Q ss_pred hhhHHhhhhhhhhcccccCC
Q 024544 233 CASIADSCEQVVAVGINCTS 252 (266)
Q Consensus 233 a~~~~~~~~~~~avGiNC~~ 252 (266)
.+..+....-+.-||+|+.+
T Consensus 125 vv~~ak~~~~piRIGvN~GS 144 (366)
T 3noy_A 125 IVEEAKRRGVAVRIGVNSGS 144 (366)
T ss_dssp HHHHHHHHTCEEEEEEEGGG
T ss_pred HHHHHHHcCCCEEEecCCcC
Confidence 55555543445679999975
No 18
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.50 E-value=2 Score=37.64 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=23.3
Q ss_pred ccccccCc--hhHHHHhhhhhhccccEEEechh
Q 024544 47 AKCLVSSP--HLVRKVHLDYLDAGANIIITASY 77 (266)
Q Consensus 47 ~~~ll~~P--e~V~~iH~~Yl~AGAdiI~TnTy 77 (266)
.+.+.-+| +.-.++-+...++|||+|.-.-.
T Consensus 22 ~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiP 54 (267)
T 3vnd_A 22 PFVTIGDPSPELSLKIIQTLVDNGADALELGFP 54 (267)
T ss_dssp EEEETTSSCHHHHHHHHHHHHHTTCSSEEEECC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 34445667 67778888889999999998743
No 19
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=91.03 E-value=2.3 Score=41.30 Aligned_cols=155 Identities=14% Similarity=0.085 Sum_probs=91.8
Q ss_pred hhHHHHhhh----hhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcc
Q 024544 55 HLVRKVHLD----YLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRIS 130 (266)
Q Consensus 55 e~V~~iH~~----Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~ 130 (266)
+.+++.|++ ++++|+|+|.--|+... .++ +++++.+++. ..
T Consensus 122 ~e~~~~~~~qi~~l~~~gvD~l~~ET~~~~-----------~Ea----~aa~~a~~~~--------------------~~ 166 (566)
T 1q7z_A 122 EEFYENFRETVEIMVEEGVDGIIFETFSDI-----------LEL----KAAVLAAREV--------------------SR 166 (566)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEECCH-----------HHH----HHHHHHHHHH--------------------CS
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEeccCCH-----------HHH----HHHHHHHHHh--------------------CC
Confidence 556666754 45889999998888533 222 2344444432 13
Q ss_pred ccceEEEEecccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCccc
Q 024544 131 SRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITI 210 (266)
Q Consensus 131 ~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~ 210 (266)
+.+++|..++.+-|..+. | .+.+++. ..+...++|.+.+..-...+++..+++.+++.. ++
T Consensus 167 ~~Pv~vS~t~~~~g~~~~-G----------~~~~~~~-------~~l~~~~~~avG~NC~~gp~~~~~~l~~l~~~~-~~ 227 (566)
T 1q7z_A 167 DVFLIAHMTFDEKGRSLT-G----------TDPANFA-------ITFDELDIDALGINCSLGPEEILPIFQELSQYT-DK 227 (566)
T ss_dssp SSCEEEEECCCTTSCCTT-S----------CCHHHHH-------HHHHTSSCSEEEEESSSCHHHHHHHHHHHHHTC-CS
T ss_pred CCcEEEEEEEcCCCeeCC-C----------CcHHHHH-------HHhhccCCCEEEEeCCCCHHHHHHHHHHHHhcC-CC
Confidence 568999999987665432 2 2444433 334447899999999877889999998887642 46
Q ss_pred ccceeeec--C--CCceeecCchHHHhhhHHhhh--hhhhhcccccC-Ccchhhhhheee
Q 024544 211 PAWFSFNS--K--DGINVVSGDSILECASIADSC--EQVVAVGINCT-SPRFIHGLILSV 263 (266)
Q Consensus 211 Pv~iSf~~--~--~~~~l~~G~~~~~a~~~~~~~--~~~~avGiNC~-~p~~~~~~l~~l 263 (266)
|+++--.- . .++....-.+.++....+.+. .++..||==|. .|+|+..+-+.+
T Consensus 228 p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~G~~iiGGCCGTtP~hI~aia~~~ 287 (566)
T 1q7z_A 228 FLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVKLFRKVL 287 (566)
T ss_dssp EEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHHHHHHHH
T ss_pred EEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHcCCcEEccccCCCHHHHHHHHHHh
Confidence 65432211 0 022222222344444444321 35667776664 699988775544
No 20
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=90.88 E-value=0.19 Score=45.03 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=35.6
Q ss_pred hhhHHhhhcCCCeEEeec-cchhhhHHHHHHHHhhcCcccccceee
Q 024544 172 RRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
++++++.++|+|.|++|+ +|+.+|++.+.+.++. ++|+++..
T Consensus 174 ~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~---~~P~i~~~ 216 (295)
T 1s2w_A 174 KRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN---QGPVVIVP 216 (295)
T ss_dssp HHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT---CSCEEECC
T ss_pred HHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC---CCCEEEeC
Confidence 378899999999999998 8999999999998863 37887654
No 21
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=90.42 E-value=8 Score=34.06 Aligned_cols=67 Identities=19% Similarity=0.171 Sum_probs=46.1
Q ss_pred HHhhhhhHHhhhcCCCeEEee-c--cchhhhHHHHHHHHhhcCcccc-cceeeecCCCceeecCchHHHhhhHHh
Q 024544 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITIP-AWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~P-v~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+++.+.++.+.+.|+|.|.+- | +..+.++...++.+++.-++.+ +.+++-+.++ .|..+..++..++
T Consensus 150 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd----~Gla~AN~laA~~ 220 (293)
T 3ewb_X 150 AFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDD----LGMATANALAAIE 220 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCC----cChHHHHHHHHHH
Confidence 455667788888999998765 3 3467788888888886432332 6788888776 4666666655554
No 22
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=90.31 E-value=3.8 Score=36.87 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=45.3
Q ss_pred HHhhhhhHHhhhcCCCeEEee-c--cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+++.+.++.+.+.|+|.|.+- | +..+.++..+++.+++.-+ .+-++|-+.++ .|..+..++..++
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p--~~~i~~H~Hnd----~GlA~AN~laAv~ 236 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYP--DIHFEFHGHND----YDLSVANSLQAIR 236 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCT--TSCEEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcC--CCeEEEEecCC----cchHHHHHHHHHH
Confidence 466677888999999999664 4 3457788888888886421 35678887776 4666666655554
No 23
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=90.28 E-value=2.7 Score=36.94 Aligned_cols=132 Identities=13% Similarity=0.030 Sum_probs=71.8
Q ss_pred hhhhhccccEEEechhhhhhhhh-hccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccccceEEEEec
Q 024544 62 LDYLDAGANIIITASYQATIQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASV 140 (266)
Q Consensus 62 ~~Yl~AGAdiI~TnTy~a~~~~l-~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsi 140 (266)
+..+++|++.|....- +|.... ...+.+.++.-+..+.+|+.|++. .+.|-+.+
T Consensus 86 ~~a~~~G~~~V~i~~~-~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~------------------------G~~V~~~l 140 (295)
T 1ydn_A 86 EAAAAAHADEIAVFIS-ASEGFSKANINCTIAESIERLSPVIGAAIND------------------------GLAIRGYV 140 (295)
T ss_dssp HHHHHTTCSEEEEEEE-SCHHHHHHHTSSCHHHHHHHHHHHHHHHHHT------------------------TCEEEEEE
T ss_pred HHHHHCCCCEEEEEEe-cCHHHHHHHcCCCHHHHHHHHHHHHHHHHHc------------------------CCeEEEEE
Confidence 4567789997766421 222211 222445444444555555555542 23355555
Q ss_pred ccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeec---cchhhhHHHHHHHHhhcCcccc-cceee
Q 024544 141 GSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPNKLEAKAYAELLEEEGITIP-AWFSF 216 (266)
Q Consensus 141 GP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET---~~~~~E~~a~~~a~~~~~~~~P-v~iSf 216 (266)
+-.... ||.+. .+.+++.+ .++.+.+.|||.|.+-+ +..+.+....++.+++. .| +-+++
T Consensus 141 ~~~~~~-----e~~~~----~~~~~~~~----~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~---~~~~~l~~ 204 (295)
T 1ydn_A 141 SCVVEC-----PYDGP----VTPQAVAS----VTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAI---APAHSLAG 204 (295)
T ss_dssp ECSSEE-----TTTEE----CCHHHHHH----HHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTT---SCGGGEEE
T ss_pred EEEecC-----CcCCC----CCHHHHHH----HHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHh---CCCCeEEE
Confidence 543210 22221 34555554 45667778999997663 23567777888888764 33 44566
Q ss_pred ecCCCceeecCchHHHhhhHHh
Q 024544 217 NSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 217 ~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
-+.++ .|..+..+...+.
T Consensus 205 H~Hn~----~Gla~an~l~Ai~ 222 (295)
T 1ydn_A 205 HYHDT----GGRALDNIRVSLE 222 (295)
T ss_dssp EEBCT----TSCHHHHHHHHHH
T ss_pred EECCC----cchHHHHHHHHHH
Confidence 66554 4766666655554
No 24
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=90.27 E-value=0.17 Score=45.17 Aligned_cols=42 Identities=21% Similarity=0.215 Sum_probs=34.9
Q ss_pred hhhHHhhhcCCCeEEeec-cchhhhHHHHHHHHhhcCcccccceee
Q 024544 172 RRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+++.++.++|+|.|++|. +++.+|++.+.+.+.. ++|+++..
T Consensus 170 ~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~---~vP~i~n~ 212 (290)
T 2hjp_A 170 RRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPG---KVPLVLVP 212 (290)
T ss_dssp HHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCC---SSCEEECG
T ss_pred HHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCC---CCCEEEec
Confidence 378889999999999999 9999999999888752 37877543
No 25
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=89.69 E-value=0.22 Score=44.81 Aligned_cols=40 Identities=20% Similarity=0.280 Sum_probs=33.3
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
++++++.++|+|.|++|.+++.+|++.+.+.+. +|+++..
T Consensus 179 ~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~-----~P~~~n~ 218 (305)
T 3ih1_A 179 ERANAYVKAGADAIFPEALQSEEEFRLFNSKVN-----APLLANM 218 (305)
T ss_dssp HHHHHHHHHTCSEEEETTCCSHHHHHHHHHHSC-----SCBEEEC
T ss_pred HHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcC-----CCEEEee
Confidence 478889999999999999999999998888753 5776544
No 26
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=89.54 E-value=2.1 Score=37.63 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=23.1
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcC
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEG 207 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~ 207 (266)
++.+.++|||.+++=.+|. +|.....+++++.+
T Consensus 118 ~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~g 150 (271)
T 3nav_A 118 YQRCQKAGVDSVLIADVPT-NESQPFVAAAEKFG 150 (271)
T ss_dssp HHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTT
T ss_pred HHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcC
Confidence 3556678888888877774 56777777777655
No 27
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=89.02 E-value=2.7 Score=39.14 Aligned_cols=105 Identities=23% Similarity=0.329 Sum_probs=64.2
Q ss_pred chhHHHHhhh----hhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCc
Q 024544 54 PHLVRKVHLD----YLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRI 129 (266)
Q Consensus 54 Pe~V~~iH~~----Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~ 129 (266)
.+.+++.|++ ++++|+|+|.--|+... .+++. +++.+++
T Consensus 134 ~eel~~~~~eqi~~L~~~GvDlll~ETi~~~-----------~Eaka----a~~a~~~---------------------- 176 (406)
T 1lt8_A 134 ETEVKKVFLQQLEVFMKKNVDFLIAEYFEHV-----------EEAVW----AVETLIA---------------------- 176 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCCSCH-----------HHHHH----HHHHHGG----------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEcccCCH-----------HHHHH----HHHHHHH----------------------
Confidence 4556666654 45889999998888533 22222 2222221
Q ss_pred cccceEEEEecccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhc---
Q 024544 130 SSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEE--- 206 (266)
Q Consensus 130 ~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~--- 206 (266)
.+.+++|..++.+-|. +. | .+.++.. ..+.+.++|.|.+..-...+++..+++.+++.
T Consensus 177 ~~lPv~iS~T~~~~G~-l~-G----------~~~~~~~-------~~l~~~~~~avGvNC~~gP~~~~~~l~~l~~~~~~ 237 (406)
T 1lt8_A 177 SGKPVAATMAIGPEGD-LH-G----------VPPGEAA-------VRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEA 237 (406)
T ss_dssp GTSCEEEEECCBTTBC-TT-C----------CCHHHHH-------HHHHTTTCSEEEEESSSCHHHHHHHHHHHHHHHHT
T ss_pred hCCcEEEEEEECCCCC-cC-C----------CcHHHHH-------HHhhcCCCCEEEecCCCCHHHHHHHHHHHHHhhhh
Confidence 2468999999976664 21 1 2333322 33444689999999866677888888777642
Q ss_pred -Ccccccce
Q 024544 207 -GITIPAWF 214 (266)
Q Consensus 207 -~~~~Pv~i 214 (266)
+.++|+++
T Consensus 238 ~g~~~pl~v 246 (406)
T 1lt8_A 238 AQLKAHLMS 246 (406)
T ss_dssp TTCCCEEEE
T ss_pred cCCCccEEE
Confidence 22466643
No 28
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=86.75 E-value=2.4 Score=38.12 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=45.2
Q ss_pred HHhhhhhHHhhhcCCCeEEee-cc--chhhhHHHHHHHHhhcCcccc-cceeeecCCCceeecCchHHHhhhHHh
Q 024544 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIP-AWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~P-v~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+++.+.++.+.+.|+|.|.+- |+ ..+.++..+++.+++.-++.| +.++|-+.++ .|..+..++..++
T Consensus 151 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd----~GlA~AN~laA~~ 221 (325)
T 3eeg_A 151 AFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHND----LGLATANSLAALQ 221 (325)
T ss_dssp HHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCC----CCHHHHHHHHHHH
Confidence 456667788888999998765 33 356788888888886421222 7788888776 4666666655554
No 29
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=84.87 E-value=0.47 Score=42.22 Aligned_cols=37 Identities=32% Similarity=0.397 Sum_probs=31.2
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccc
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~ 213 (266)
++++++.++|+|.|++|.+++.++++.+.+.+. +|++
T Consensus 172 ~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----~P~i 208 (287)
T 3b8i_A 172 QRTLAYQEAGADGICLVGVRDFAHLEAIAEHLH-----IPLM 208 (287)
T ss_dssp HHHHHHHHTTCSEEEEECCCSHHHHHHHHTTCC-----SCEE
T ss_pred HHHHHHHHcCCCEEEecCCCCHHHHHHHHHhCC-----CCEE
Confidence 378889999999999999999999888877553 6776
No 30
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=84.32 E-value=1.5 Score=40.69 Aligned_cols=82 Identities=26% Similarity=0.379 Sum_probs=53.3
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhh---cCcccccceeeecCC---------------CceeecCc---
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEE---EGITIPAWFSFNSKD---------------GINVVSGD--- 228 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~---~~~~~Pv~iSf~~~~---------------~~~l~~G~--- 228 (266)
--.|+..|.++|+|++-+ |+|+.++++++-+..++ .+.++|++.-|.|+. .-++.-|.
T Consensus 40 Tv~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~ 118 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGR 118 (406)
T ss_dssp HHHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCS
T ss_pred HHHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCc
Confidence 345889999999999986 69999888877654433 345689888777642 01222222
Q ss_pred ------hHHHhhhHHhhhhhhhhcccccCC
Q 024544 229 ------SILECASIADSCEQVVAVGINCTS 252 (266)
Q Consensus 229 ------~~~~a~~~~~~~~~~~avGiNC~~ 252 (266)
.+.+.++.+....-+.=||+|+.+
T Consensus 119 ~~k~~e~~~~vv~~ak~~~~pIRIGVN~GS 148 (406)
T 4g9p_A 119 GRHKDEHFAEMIRIAMDLGKPVRIGANWGS 148 (406)
T ss_dssp THHHHHHHHHHHHHHHHHTCCEEEEEEGGG
T ss_pred cccHHHHHHHHHHHHHHccCCceecccccc
Confidence 233444444443445679999976
No 31
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=83.27 E-value=2.4 Score=36.97 Aligned_cols=87 Identities=11% Similarity=0.059 Sum_probs=48.0
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCC----------Cce--ee-----cCc------hH
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD----------GIN--VV-----SGD------SI 230 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~----------~~~--l~-----~G~------~~ 230 (266)
++.+.++|||.+++=.+| ++|.....+++++.+.+.-..++-+..+ ++- +. .|. .+
T Consensus 109 ~~~~~~aGvdG~IipDLP-~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~ 187 (252)
T 3tha_A 109 VKKAKSLGICALIVPELS-FEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAIL 187 (252)
T ss_dssp HHHHHHTTEEEEECTTCC-GGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCC-HHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHH
Confidence 355677889988888887 4577777777777653211112221110 000 00 132 23
Q ss_pred HHhhhHHhhh-hhhhhcccccCCcchhhhhhe
Q 024544 231 LECASIADSC-EQVVAVGINCTSPRFIHGLIL 261 (266)
Q Consensus 231 ~~a~~~~~~~-~~~~avGiNC~~p~~~~~~l~ 261 (266)
.+.+..+++. .-+.++|+-.+.|+++..+.+
T Consensus 188 ~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~ 219 (252)
T 3tha_A 188 QDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK 219 (252)
T ss_dssp HHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT
T ss_pred HHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh
Confidence 3445555442 246778888888887766543
No 32
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=82.77 E-value=6.3 Score=35.02 Aligned_cols=47 Identities=21% Similarity=0.150 Sum_probs=32.0
Q ss_pred HhhhhhHHhhhcCCCeEEeecc----chhhhHHHHHHHHhhcCcccc-cceee
Q 024544 169 FHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEGITIP-AWFSF 216 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~~~~P-v~iSf 216 (266)
.....++.+.+.|+|++-++.. .+.++++.+++...... ++| |+++-
T Consensus 178 ~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~-~~P~Vv~aG 229 (304)
T 1to3_A 178 AIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHI-NMPWVILSS 229 (304)
T ss_dssp HHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTC-CSCEEECCT
T ss_pred HHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccC-CCCeEEEec
Confidence 3444577788899999988874 56677777777655432 478 55443
No 33
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=82.14 E-value=10 Score=33.81 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=41.5
Q ss_pred hHHhhhcCCCeEEee-ccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCc--hHHHhhhHHhhhhhhhhccccc
Q 024544 174 VLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD--SILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 174 i~~l~~~gvD~i~~E-T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~--~~~~a~~~~~~~~~~~avGiNC 250 (266)
++.+.+.|+|.|-+. ++.++.+++..+ + -.+.+.-.+++...|..|+ .+.+.+..+.+ .+...++..|
T Consensus 255 l~~~~~~g~d~i~~d~~~~~~~~~k~~~------g--~~~~l~Gnldp~~~l~~g~~e~i~~~v~~~l~-~~g~I~~~Gh 325 (348)
T 4ay7_A 255 LSDMADCGFEGLSVEEKIGSAKKGKEVI------G--TRARLVGNVSSPFTLLPGPVDKIKAEAKEALE-GGIDVLAPGC 325 (348)
T ss_dssp HHHHHTSCCSEEECCGGGCCHHHHHHHH------T--TSSEEEEEECCCCCCTTCCHHHHHHHHHHHHH-TTCSEEEESS
T ss_pred HHHHHHhccccccccchhhHHHHHHHHh------C--CCEEEEcCCCChHhhcCCCHHHHHHHHHHHHh-CCCCEEeCCC
Confidence 455677899999875 444554433222 2 2233445555545565664 23333332222 2334566677
Q ss_pred C-----Ccchhhhhheee
Q 024544 251 T-----SPRFIHGLILSV 263 (266)
Q Consensus 251 ~-----~p~~~~~~l~~l 263 (266)
. .|+.+..+++..
T Consensus 326 gi~p~tp~env~a~v~av 343 (348)
T 4ay7_A 326 GIAPMTPLENVKALVAAR 343 (348)
T ss_dssp SCCTTCCHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHH
Confidence 5 246666666543
No 34
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=82.00 E-value=9.7 Score=32.20 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=25.4
Q ss_pred cccCchhHHHHhhhhhhccccEEEechhhh
Q 024544 50 LVSSPHLVRKVHLDYLDAGANIIITASYQA 79 (266)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a 79 (266)
+.+-|+.+...-+.|.++|||+|+.+.|..
T Consensus 73 l~DipnTv~~~~~~~~~~gad~vtvh~~~G 102 (228)
T 3m47_A 73 VADIPETNEKICRATFKAGADAIIVHGFPG 102 (228)
T ss_dssp ECSCHHHHHHHHHHHHHTTCSEEEEESTTC
T ss_pred ecccHhHHHHHHHHHHhCCCCEEEEeccCC
Confidence 347789999999999999999999887753
No 35
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=81.40 E-value=6.2 Score=37.48 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=28.9
Q ss_pred hHHhhhcCCCeEEee-----c----------cchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 174 VLILANSGADLIAFE-----T----------IPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 174 i~~l~~~gvD~i~~E-----T----------~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
++.+.++|+|.|.+. . .|.+.-+..+.+++++. ++|++.+.-+
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~--~iPVIa~GGI 343 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY--GIPVIADGGI 343 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG--TCCEEEESCC
T ss_pred HHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccC--CCeEEEeCCC
Confidence 456778999999874 1 45555556666666664 4899876643
No 36
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=81.27 E-value=17 Score=34.31 Aligned_cols=64 Identities=16% Similarity=0.170 Sum_probs=46.6
Q ss_pred HHhhhhhHHhhhcCCCeEEee-c--cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+++.+.++.+.+.|+|.|.+= | +....++..+++++++. .++-+++-+.++ .|..+..++..++
T Consensus 158 e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~---~~~~i~~H~Hnd----~GlAvAN~laAv~ 224 (464)
T 2nx9_A 158 QTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQ---VDVELHLHCHST----AGLADMTLLKAIE 224 (464)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHH---CCSCEEEEECCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHh---cCCeEEEEECCC----CChHHHHHHHHHH
Confidence 467777888899999998664 4 33577888899988874 245678887776 5777776666554
No 37
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=80.42 E-value=10 Score=32.16 Aligned_cols=41 Identities=17% Similarity=0.234 Sum_probs=26.2
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccc--------hhhhHHHHHHHH
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKAYAELL 203 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~--------~~~E~~a~~~a~ 203 (266)
..+.+.+..++.++...+.||. |.+|+.+ +..++..+++.+
T Consensus 126 ~~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v 174 (294)
T 3vni_A 126 DWERSVESVREVAKVAEACGVD-FCLEVLNRFENYLINTAQEGVDFVKQV 174 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccCCHHHHHHHHHHc
Confidence 4455666666666666678996 6679874 455555555544
No 38
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=80.37 E-value=7.4 Score=37.09 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=28.2
Q ss_pred hHHhhhcCCCeEEee----c-----------cchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 174 VLILANSGADLIAFE----T-----------IPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 174 i~~l~~~gvD~i~~E----T-----------~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
++.+.++|||.|.+- + .|.+.-+..+.+++++. ++|++.+.-+
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~--~iPVIa~GGI 368 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKH--GIPVIADGGI 368 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTT--TCCEEEESCC
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhC--CCcEEEeCCC
Confidence 455677899999751 1 45565555566666654 4899987644
No 39
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=79.68 E-value=32 Score=31.29 Aligned_cols=65 Identities=11% Similarity=0.046 Sum_probs=43.4
Q ss_pred HHhhhhhHHhhhcCCCeEEee-cc--chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+++.+.++.+.+. +|.|.+= |+ ..+.++..+++.+++.- +.++-++|-+.++ .|..+..++..+.
T Consensus 145 ~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~-~~~~~i~~H~Hnd----~GlAvAN~laAv~ 212 (382)
T 2ztj_A 145 QDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVV-GPRVDIEFHGHND----TGCAIANAYEAIE 212 (382)
T ss_dssp HHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHH-TTTSEEEEEEBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhc-CCCCeEEEEeCCC----ccHHHHHHHHHHH
Confidence 4566677778888 9988664 43 35778888888888740 0235578888776 4666666665554
No 40
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=78.77 E-value=23 Score=31.09 Aligned_cols=76 Identities=20% Similarity=0.217 Sum_probs=40.4
Q ss_pred HhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCC------CceeecCch--HHHhhhHHh--hhhhhhh
Q 024544 176 ILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD------GINVVSGDS--ILECASIAD--SCEQVVA 245 (266)
Q Consensus 176 ~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~------~~~l~~G~~--~~~a~~~~~--~~~~~~a 245 (266)
.|.++|++.+-+|-- .|....++++.+.+ +||+--+-+.+ ++...-|.+ .+++++... +..++++
T Consensus 103 rl~kaGa~aVklEdg---~e~~~~I~al~~ag--IpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ 177 (275)
T 1o66_A 103 ELMAAGAHMVKLEGG---VWMAETTEFLQMRG--IPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAV 177 (275)
T ss_dssp HHHHTTCSEEEEECS---GGGHHHHHHHHHTT--CCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSE
T ss_pred HHHHcCCcEEEECCc---HHHHHHHHHHHHcC--CCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcE
Confidence 355599999999975 46666677777755 88873332211 122223433 233333221 1257788
Q ss_pred cccccCCcchh
Q 024544 246 VGINCTSPRFI 256 (266)
Q Consensus 246 vGiNC~~p~~~ 256 (266)
|=+-|...+..
T Consensus 178 ivlE~vp~~~a 188 (275)
T 1o66_A 178 VLMECVLAELA 188 (275)
T ss_dssp EEEESCCHHHH
T ss_pred EEEecCCHHHH
Confidence 88888754333
No 41
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=78.71 E-value=11 Score=34.30 Aligned_cols=43 Identities=16% Similarity=0.161 Sum_probs=25.5
Q ss_pred hHHhhhcCCCeEEee----c-----------cchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 174 VLILANSGADLIAFE----T-----------IPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 174 i~~l~~~gvD~i~~E----T-----------~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
++.+.++|+|+|.+- + .|.+.-+..+.++++.. ++||+.+.-+
T Consensus 163 A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~--~iPVIA~GGI 220 (366)
T 4fo4_A 163 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY--GIPVIADGGI 220 (366)
T ss_dssp HHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGG--TCCEEEESCC
T ss_pred HHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhc--CCeEEEeCCC
Confidence 455667899999982 1 24443444444444443 4898876543
No 42
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=78.26 E-value=10 Score=34.34 Aligned_cols=46 Identities=17% Similarity=0.153 Sum_probs=35.6
Q ss_pred HHhhhhhHHhhhcC--CCeEEeec-----cchhhhHHHHHHHHhhcCccccccee
Q 024544 168 EFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 168 ~~~~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
+.+...++.|.+.| +|.|-+.. .|+..+++.+++.+...+ +|||||
T Consensus 202 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~G--l~i~iT 254 (356)
T 2uwf_A 202 DDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTSLG--LDNQVT 254 (356)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEE
T ss_pred HHHHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHhcC--CcEEEE
Confidence 34556788887777 59987753 377889999999888765 899998
No 43
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=78.19 E-value=0.91 Score=39.61 Aligned_cols=32 Identities=9% Similarity=0.239 Sum_probs=27.9
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHH
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELL 203 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~ 203 (266)
++++++.++|+|.|++|.+|+.++++.+.+.+
T Consensus 172 ~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~ 203 (255)
T 2qiw_A 172 KRIKLMEQAGARSVYPVGLSTAEQVERLVDAV 203 (255)
T ss_dssp HHHHHHHHHTCSEEEECCCCSHHHHHHHHTTC
T ss_pred HHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhC
Confidence 37889999999999999999999988887654
No 44
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=77.17 E-value=2.7 Score=35.78 Aligned_cols=64 Identities=22% Similarity=0.311 Sum_probs=41.8
Q ss_pred hhhhHHhhhcCCCeEEeecc--chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccc
Q 024544 171 RRRVLILANSGADLIAFETI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGi 248 (266)
.++++.+.++|+|++++-+- .+..+++..++.+++.+ +++++... +++++... .+ .+++.||+
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g--~~v~~~v~-----------t~eea~~a-~~-~Gad~Ig~ 155 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHG--LLAMADCS-----------TVNEGISC-HQ-KGIEFIGT 155 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT--CEEEEECS-----------SHHHHHHH-HH-TTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCC--CEEEEecC-----------CHHHHHHH-Hh-CCCCEEEe
Confidence 34667778899999988764 24567778888888754 66665442 34555433 33 47788876
Q ss_pred c
Q 024544 249 N 249 (266)
Q Consensus 249 N 249 (266)
|
T Consensus 156 ~ 156 (229)
T 3q58_A 156 T 156 (229)
T ss_dssp T
T ss_pred c
Confidence 4
No 45
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=76.86 E-value=2.5 Score=37.36 Aligned_cols=40 Identities=28% Similarity=0.376 Sum_probs=30.7
Q ss_pred HHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccc
Q 024544 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~ 213 (266)
+--.+++.++.++|+|.|.+|-+|+. +++.+.+.+ ++|++
T Consensus 173 ~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~l-----~iP~i 212 (275)
T 3vav_A 173 AQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTREL-----SIPTI 212 (275)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHHC-----SSCEE
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHhC-----CCCEE
Confidence 33445789999999999999999986 777776654 26664
No 46
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=76.30 E-value=23 Score=33.03 Aligned_cols=63 Identities=8% Similarity=0.052 Sum_probs=43.0
Q ss_pred HhhhhhHHhhhcCCCeEEee-cc--chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 169 FHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
++.+.++.+.+.|+|.|.+= |+ ..+.++..+++.+++. .++.+++-+.++ .|..+..++..+.
T Consensus 181 ~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~---~~~~i~~H~Hnd----~GlAvAN~laAv~ 246 (423)
T 3ivs_A 181 DLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGV---VSCDIECHFHND----TGMAIANAYCALE 246 (423)
T ss_dssp HHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHH---CSSEEEEEEBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhh---cCCeEEEEECCC----CchHHHHHHHHHH
Confidence 34556677888999988654 43 3566788888888763 356678888776 4666666655554
No 47
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=76.28 E-value=3 Score=35.54 Aligned_cols=64 Identities=16% Similarity=0.166 Sum_probs=41.6
Q ss_pred hhhhHHhhhcCCCeEEeeccc--hhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccc
Q 024544 171 RRRVLILANSGADLIAFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~~--~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGi 248 (266)
.+|++.+.+.|+|++++-+-. +..+++.+++.+++.+ ++++++.. +.+++.. +.+ .+++.||+
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g--~~v~~~v~-----------t~eea~~-a~~-~Gad~Ig~ 155 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHH--LLTMADCS-----------SVDDGLA-CQR-LGADIIGT 155 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT--CEEEEECC-----------SHHHHHH-HHH-TTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCC--CEEEEeCC-----------CHHHHHH-HHh-CCCCEEEE
Confidence 345667788999999987652 4467778888888754 66665442 2444433 333 47778876
Q ss_pred c
Q 024544 249 N 249 (266)
Q Consensus 249 N 249 (266)
|
T Consensus 156 ~ 156 (232)
T 3igs_A 156 T 156 (232)
T ss_dssp T
T ss_pred c
Confidence 4
No 48
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=76.22 E-value=2.5 Score=37.44 Aligned_cols=64 Identities=16% Similarity=0.133 Sum_probs=41.2
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccccc
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC 250 (266)
++..+++|+|+|++-+|+ +++++.+++.++...+.+|+.+|- |-+++.+..+.. .+++.|++-.
T Consensus 206 a~eA~~aGaD~I~LDn~~-~e~l~~av~~l~~~~~~v~ieASG----------GIt~eni~~~a~--tGVD~IsvGs 269 (285)
T 1o4u_A 206 ALRAVEAGADIVMLDNLS-PEEVKDISRRIKDINPNVIVEVSG----------GITEENVSLYDF--ETVDVISSSR 269 (285)
T ss_dssp HHHHHHTTCSEEEEESCC-HHHHHHHHHHHHHHCTTSEEEEEE----------CCCTTTGGGGCC--TTCCEEEEGG
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCceEEEEC----------CCCHHHHHHHHH--cCCCEEEEeH
Confidence 343456899999999975 678888888887633346666655 344444433333 4677766655
No 49
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=76.11 E-value=9.7 Score=34.87 Aligned_cols=50 Identities=16% Similarity=0.203 Sum_probs=37.8
Q ss_pred HHhhhhhHHhhhcCC--CeEEee-----ccchhhhHHHHHHHHhhcCccccccee-eecC
Q 024544 168 EFHRRRVLILANSGA--DLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (266)
Q Consensus 168 ~~~~~qi~~l~~~gv--D~i~~E-----T~~~~~E~~a~~~a~~~~~~~~Pv~iS-f~~~ 219 (266)
+.+..+++.|.+.|+ |.|-+. ..|+..+++..++.+...+ +||||| +.+.
T Consensus 212 ~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~lG--lpI~iTElDi~ 269 (379)
T 1r85_A 212 TALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAALG--LDNQITELDVS 269 (379)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHHHHTT--CEEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHHHhcC--CeEEEeecccc
Confidence 345557788888785 999775 2477889999999888866 899998 5443
No 50
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=75.87 E-value=12 Score=33.81 Aligned_cols=46 Identities=13% Similarity=0.080 Sum_probs=34.9
Q ss_pred HHhhhhhHHhhhcC--CCeEEee-----ccchhhhHHHHHHHHhhcCccccccee
Q 024544 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 168 ~~~~~qi~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
+.+..+++.|.+.| +|.|-+. ..|+..+++..++.+...+ +|||||
T Consensus 201 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~G--lpi~iT 253 (356)
T 2dep_A 201 DILYELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAGLG--LDNIIT 253 (356)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEE
T ss_pred HHHHHHHHHHHHCCCCccEEEeeeeecCCCCCHHHHHHHHHHHHhCC--CeEEEe
Confidence 44666777777766 5998775 3477889999998888765 899998
No 51
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=75.83 E-value=3.7 Score=37.59 Aligned_cols=67 Identities=12% Similarity=0.069 Sum_probs=41.0
Q ss_pred hhhhhHHhhhcCCCeEEeeccc-hhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccc
Q 024544 170 HRRRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~-~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGi 248 (266)
+.++++.++++|||+|.+.|.. +..+....++.+++..+++|+++.. ..+.+++....+ .++++|.+
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~----------v~t~e~A~~a~~--aGAD~I~v 176 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGARALIE--AGVSAVKV 176 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE----------ECSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee----------eCCHHHHHHHHH--cCCCEEEE
Confidence 3456888999999999987753 3345555666666653357877632 223445544333 36666655
No 52
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=75.82 E-value=19 Score=31.38 Aligned_cols=75 Identities=16% Similarity=0.167 Sum_probs=42.0
Q ss_pred HhhhcCCCeEEeeccchhhhHHHHHHHHhhcCccccccee--eecCC----CceeecCchH---HHhhhHHh--hhhhhh
Q 024544 176 ILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFS--FNSKD----GINVVSGDSI---LECASIAD--SCEQVV 244 (266)
Q Consensus 176 ~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iS--f~~~~----~~~l~~G~~~---~~a~~~~~--~~~~~~ 244 (266)
.|.++|++.+-+|-- .|....++++.+.+ +||+-- ++... ++...-|.+- +++++... +..+++
T Consensus 102 rl~kaGa~aVklEgg---~e~~~~I~al~~ag--ipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~ 176 (264)
T 1m3u_A 102 TVMRAGANMVKIEGG---EWLVETVQMLTERA--VPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQ 176 (264)
T ss_dssp HHHHTTCSEEECCCS---GGGHHHHHHHHHTT--CCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHcCCCEEEECCc---HHHHHHHHHHHHCC--CCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCc
Confidence 355599999999975 46666677777755 888722 22111 1222234432 23332221 125778
Q ss_pred hcccccCCcch
Q 024544 245 AVGINCTSPRF 255 (266)
Q Consensus 245 avGiNC~~p~~ 255 (266)
++=+-|...+.
T Consensus 177 ~ivlE~vp~~~ 187 (264)
T 1m3u_A 177 LLVLECVPVEL 187 (264)
T ss_dssp EEEEESCCHHH
T ss_pred EEEEecCCHHH
Confidence 88888875433
No 53
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=75.70 E-value=15 Score=33.55 Aligned_cols=49 Identities=14% Similarity=0.189 Sum_probs=37.5
Q ss_pred HHhhhhhHHhhhcC--CCeEEee-----ccchhhhHHHHHHHHhhcCccccccee-eec
Q 024544 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS-FNS 218 (266)
Q Consensus 168 ~~~~~qi~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~Pv~iS-f~~ 218 (266)
+.+..+++.|.+.| +|.|-+. ..|+..+++.+++.+...+ +|++|| +.+
T Consensus 209 ~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~~G--l~i~iTElDi 265 (378)
T 1ur1_A 209 EATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKLG--LRVHFTSLDV 265 (378)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHHHHhcC--CeEEEEeccc
Confidence 34445778787777 5999886 4578899999999888865 899998 443
No 54
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=75.58 E-value=37 Score=29.95 Aligned_cols=46 Identities=22% Similarity=0.238 Sum_probs=26.9
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ +. .-++.+|-.++.+.+++.
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTG---E~---~~Ls~~Er~~v~~~~v~~ 88 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTG---ES---ATLDVEEHIQVIRRVVDQ 88 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGG---TG---GGCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc---Ch---hhCCHHHHHHHHHHHHHH
Confidence 34567777777789999955543 322 11 134555556666655554
No 55
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=75.41 E-value=3.9 Score=36.16 Aligned_cols=65 Identities=14% Similarity=0.116 Sum_probs=42.8
Q ss_pred hhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccccc
Q 024544 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC 250 (266)
+++..+++|+|.|++.+|+ ..+++.+++.++...++.++.+|- |-+++.+..+.. .+++.|++-.
T Consensus 206 ea~eal~aGaD~I~LDn~~-~~~~~~~v~~l~~~~~~v~ieaSG----------GIt~~~i~~~a~--tGVD~isvG~ 270 (284)
T 1qpo_A 206 QLDAVLPEKPELILLDNFA-VWQTQTAVQRRDSRAPTVMLESSG----------GLSLQTAATYAE--TGVDYLAVGA 270 (284)
T ss_dssp HHHHHGGGCCSEEEEETCC-HHHHHHHHHHHHHHCTTCEEEEES----------SCCTTTHHHHHH--TTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCeEEEEEC----------CCCHHHHHHHHh--cCCCEEEECH
Confidence 4555566899999999986 578888888887643234554443 445555544433 4778777655
No 56
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=73.62 E-value=35 Score=32.82 Aligned_cols=66 Identities=14% Similarity=0.070 Sum_probs=46.6
Q ss_pred HHhhhhhHHhhhcCCCeEEee-c--cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+++.+.++.+.+.|+|.|.+= | +....++..+++++++.-+ -.+.+++-+.++ .|..+..++..+.
T Consensus 175 e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~i~I~~H~Hnd----~GlAvAN~laAve 243 (539)
T 1rqb_A 175 EGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYG-QKTQINLHCHST----TGVTEVSLMKAIE 243 (539)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHC-TTCCEEEEEBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcC-CCceEEEEeCCC----CChHHHHHHHHHH
Confidence 467778888899999998664 3 3457788888888876311 136778888776 5777776666554
No 57
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=73.14 E-value=32 Score=29.44 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=23.9
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcC
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEG 207 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~ 207 (266)
++.+.++|+|.+++=.+|. +|+...++.+++.+
T Consensus 115 ~~~~~~aG~dgvii~dl~~-ee~~~~~~~~~~~g 147 (262)
T 2ekc_A 115 CRLSREKGIDGFIVPDLPP-EEAEELKAVMKKYV 147 (262)
T ss_dssp HHHHHHTTCCEEECTTCCH-HHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEECCCCH-HHHHHHHHHHHHcC
Confidence 4556678899888766653 67778888888765
No 58
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=72.99 E-value=47 Score=28.94 Aligned_cols=46 Identities=17% Similarity=0.167 Sum_probs=26.2
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ -.. -++.+|-.++.+.+++.
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttG-E~~-----~Ls~~Er~~v~~~~~~~ 72 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTG-ESA-----TLSVEEHTAVIEAVVKH 72 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTT-TGG-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcccc-Ccc-----cCCHHHHHHHHHHHHHH
Confidence 34567777777789999955543 322 111 24555555666555543
No 59
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=72.75 E-value=44 Score=29.01 Aligned_cols=47 Identities=11% Similarity=0.118 Sum_probs=26.1
Q ss_pred CchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+== +-+. ..++.+|-.++.+.+++.
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt--tGE~---~~Ls~~Er~~v~~~~~~~ 65 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGT--TGES---PTLSKSEHEQVVEITIKT 65 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSG--GGTG---GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--ccCh---hhCCHHHHHHHHHHHHHH
Confidence 4456777777778999996654321 1111 124445555565555543
No 60
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=72.59 E-value=12 Score=33.53 Aligned_cols=47 Identities=17% Similarity=0.051 Sum_probs=36.3
Q ss_pred HHhhhhhHHhhhcC--CCeEEeec-----cchhhhHHHHHHHHhhcCcccccceee
Q 024544 168 EFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 168 ~~~~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+.+..+++.|.+.| +|.|-+.. .|+..+++..++.+...+ +||+||=
T Consensus 187 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~lG--l~v~iTE 240 (331)
T 3emz_A 187 EKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASLD--VQLHVTE 240 (331)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTTS--CEEEEEE
T ss_pred HHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHHcC--CcEEEee
Confidence 34556788888777 59998763 467889999999888866 8999874
No 61
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=72.02 E-value=50 Score=28.85 Aligned_cols=46 Identities=22% Similarity=0.283 Sum_probs=26.8
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ +. .-++.+|-.++++.+++.
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTG---E~---~~Ls~eEr~~v~~~~~~~ 77 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTTG---ES---PTLTSEEKVALYRHVVSV 77 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTT---TG---GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc---Ch---hhCCHHHHHHHHHHHHHH
Confidence 44567777777889999965543 322 11 124555555666655543
No 62
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=71.75 E-value=50 Score=28.68 Aligned_cols=46 Identities=9% Similarity=0.186 Sum_probs=26.9
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ -.. -++.+|-.++.+.+++.
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttG-E~~-----~Ls~~Er~~v~~~~~~~ 66 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTG-ESA-----TLNHDEHADVVMMTLDL 66 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTT-TGG-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc-chh-----hCCHHHHHHHHHHHHHH
Confidence 45567777777789999966543 321 111 24555555666665544
No 63
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=71.61 E-value=50 Score=28.68 Aligned_cols=46 Identities=15% Similarity=0.186 Sum_probs=25.5
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ +. .-++.+|-.++++.+++.
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttG---E~---~~Ls~~Er~~v~~~~~~~ 65 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGTTG---ES---PTLTFEEHEKVIEFAVKR 65 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESSTTT---TG---GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccc---Ch---hhCCHHHHHHHHHHHHHH
Confidence 34566777777789999855443 321 11 124445555565555543
No 64
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=71.60 E-value=47 Score=29.32 Aligned_cols=47 Identities=11% Similarity=0.080 Sum_probs=27.0
Q ss_pred CchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+==..-.. -++.+|-.++.+.+++.
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~-----~Ls~~Er~~v~~~~v~~ 89 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEGA-----YLSDPEWDEVVDFTLKT 89 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGG-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHH
Confidence 455777777778899999655432211111 24555555666555543
No 65
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=71.39 E-value=3.8 Score=35.57 Aligned_cols=58 Identities=26% Similarity=0.256 Sum_probs=40.8
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeE-----EeeccchhhhHHHHHHHHhhcCcccccceeeecCC-Cce
Q 024544 162 SLETLKEFHRRRVLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD-GIN 223 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i-----~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~-~~~ 223 (266)
+.+++.+ +++.+...|+|++ +++.+++..++...+..+++.-.++|+++|+.... +|.
T Consensus 30 t~~e~l~----~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~ 93 (258)
T 4h3d_A 30 NKKDIIK----EAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGE 93 (258)
T ss_dssp SHHHHHH----HHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCS
T ss_pred CHHHHHH----HHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCC
Confidence 4555544 3445566778877 67888888888888888887533699999996643 443
No 66
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=71.27 E-value=46 Score=28.07 Aligned_cols=41 Identities=17% Similarity=0.236 Sum_probs=26.0
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccch-----hhhHHHHHHHH
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIPN-----KLEAKAYAELL 203 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~-----~~E~~a~~~a~ 203 (266)
..+.+.+..++..+...+.||. |.+|+.+. ..++..+++.+
T Consensus 141 ~~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~l~~~v 186 (295)
T 3cqj_A 141 TRRRFRDGLKESVEMASRAQVT-LAMEIMDYPLMNSISKALGYAHYL 186 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCE-EEEECCSSGGGCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCE-EEEeeCCCcccCCHHHHHHHHHhc
Confidence 4556666677666666778997 56698764 45555554443
No 67
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=70.93 E-value=17 Score=32.32 Aligned_cols=46 Identities=22% Similarity=0.144 Sum_probs=34.9
Q ss_pred HHhhhhhHHhhhcC--CCeEEeec-----cchhhhHHHHHHHHhhcCccccccee
Q 024544 168 EFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 168 ~~~~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
+.+..+++.|.+.| +|.|-+.+ .|+..+++.+++.+...+ +|||||
T Consensus 188 ~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~~G--~pi~iT 240 (331)
T 1n82_A 188 EKIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYASLG--VVLHIT 240 (331)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTT--CEEEEE
T ss_pred HHHHHHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHhcC--CeEEEE
Confidence 44556777777777 49987753 467888999998888765 899998
No 68
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=70.86 E-value=49 Score=28.74 Aligned_cols=46 Identities=15% Similarity=0.246 Sum_probs=25.8
Q ss_pred CchhHHHHhhhhhhccccEEEe-chhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|.. -|-+ +. ..++.+|-.++.+.+++.
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttG---E~---~~Ls~~Er~~v~~~~~~~ 66 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTG---EA---STLSMEEHTQVIKEIIRV 66 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTT---TG---GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccc---cc---ccCCHHHHHHHHHHHHHH
Confidence 4456777777778999995543 3322 11 124555555555555543
No 69
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=70.45 E-value=53 Score=28.46 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=25.5
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ -.. -++.+|-.++++.+++.
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttG-E~~-----~Ls~~Er~~v~~~~~~~ 65 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGTTG-ESP-----TLSHEEHKKVIEKVVDV 65 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTT-TGG-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccc-Chh-----hCCHHHHHHHHHHHHHH
Confidence 44567777777789999865543 321 111 23445555555555543
No 70
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=70.21 E-value=12 Score=33.16 Aligned_cols=49 Identities=12% Similarity=0.187 Sum_probs=35.3
Q ss_pred HhhhhhHHhhhcC--CCeEEeec-----cchhhhHHHHHHHHhhcCccccccee-eecC
Q 024544 169 FHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (266)
Q Consensus 169 ~~~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~a~~~~~~~~Pv~iS-f~~~ 219 (266)
.+..+++.|.+.| +|.|-+.. .|+..+++..++.+...+ +||||| +.+.
T Consensus 184 ~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l~~~a~~G--~pv~iTEldi~ 240 (313)
T 1v0l_A 184 AMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALG--VDVAITELDIQ 240 (313)
T ss_dssp HHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTTT--CEEEEEEEEET
T ss_pred HHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHHHHHHhcC--CeEEEEeCCcc
Confidence 3445777777777 59987753 355788888888888765 899998 4443
No 71
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=70.17 E-value=61 Score=32.21 Aligned_cols=65 Identities=11% Similarity=0.141 Sum_probs=47.0
Q ss_pred HHhhhhhHHhhhcCCCeEEee-c--cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+++.+.++.+.++|+|.|.+= | +....++..+++++++.-+ .+.|+|-+.++ .|..+..++..++
T Consensus 261 e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p--~~~I~~H~Hnd----~GlAvANslaAve 328 (718)
T 3bg3_A 261 QYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFP--DLPLHIHTHDT----SGAGVAAMLACAQ 328 (718)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHST--TCCEEEECCCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCC--CCeEEEEECCC----ccHHHHHHHHHHH
Confidence 467778888999999998765 3 3357788888988887421 36678888776 5777776666555
No 72
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=69.89 E-value=57 Score=28.58 Aligned_cols=46 Identities=22% Similarity=0.289 Sum_probs=26.2
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ -.. .++.+|-.++++.+++.
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTG-E~~-----~Ls~eEr~~vi~~~~~~ 77 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGTTG-ESP-----TVNEDEREKLVSRTLEI 77 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGG-TGG-----GCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcccc-chh-----hCCHHHHHHHHHHHHHH
Confidence 34567777777789999965543 322 111 24545555666555543
No 73
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=69.82 E-value=23 Score=31.25 Aligned_cols=27 Identities=11% Similarity=-0.007 Sum_probs=19.5
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHH
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYA 200 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~ 200 (266)
++.+.+.|+|.+-++.-.++.|++..+
T Consensus 245 l~~l~~~g~d~~~~d~~~dl~~~~~~~ 271 (338)
T 2eja_A 245 IDLAVDYRADALSVDWSVDIPELFKIY 271 (338)
T ss_dssp HHHHTTSCCSEEECCTTSCHHHHHHHC
T ss_pred HHHHHHcCCCEEEeCCCCCHHHHHHhC
Confidence 345667899999988777777766543
No 74
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=69.72 E-value=5.1 Score=35.02 Aligned_cols=59 Identities=22% Similarity=0.184 Sum_probs=37.8
Q ss_pred hhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhcccc
Q 024544 178 ANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (266)
Q Consensus 178 ~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiN 249 (266)
.++|+|+|.+-|++ +++++.+++.++...+++|+.+|- |-+.+.+..++. .+++.||+-
T Consensus 199 ~~aGaD~I~ld~~~-~~~l~~~v~~l~~~~~~~~i~AsG----------GI~~~ni~~~~~--aGaD~i~vG 257 (273)
T 2b7n_A 199 MNAGADIVMCDNLS-VLETKEIAAYRDAHYPFVLLEASG----------NISLESINAYAK--SGVDAISVG 257 (273)
T ss_dssp HHHTCSEEEEETCC-HHHHHHHHHHHHHHCTTCEEEEES----------SCCTTTHHHHHT--TTCSEEECT
T ss_pred HHcCCCEEEECCCC-HHHHHHHHHHhhccCCCcEEEEEC----------CCCHHHHHHHHH--cCCcEEEEc
Confidence 35799999999975 778888888776532346666554 334444444433 466777664
No 75
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=69.69 E-value=8.6 Score=31.40 Aligned_cols=40 Identities=18% Similarity=0.269 Sum_probs=30.7
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCccccccee
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
++.+.++|+|.+++=..+..+.+..+++.+++.+ +++.+.
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g--~~~~v~ 109 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG--KQVVVD 109 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEE
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC--CeEEEE
Confidence 6777889999999987776566678888888865 666654
No 76
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=69.28 E-value=4.8 Score=35.25 Aligned_cols=35 Identities=31% Similarity=0.379 Sum_probs=26.3
Q ss_pred HHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHH
Q 024544 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~ 203 (266)
+--.+++.++.++|+|.|.+|-+|. ++++.+.+.+
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l 195 (264)
T 1m3u_A 161 DQLLSDALALEAAGAQLLVLECVPV-ELAKRITEAL 195 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHHhC
Confidence 3344578899999999999999995 5666555543
No 77
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=69.26 E-value=50 Score=29.54 Aligned_cols=46 Identities=17% Similarity=0.133 Sum_probs=26.5
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ +. .-++.+|-.++++.+++.
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTG---E~---~~Ls~eEr~~vi~~~ve~ 96 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGG---EF---SQLGAEERKAIARFAIDH 96 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTT---TG---GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcccc---Ch---hhCCHHHHHHHHHHHHHH
Confidence 45567777777889999955443 322 11 124445555666555543
No 78
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=69.25 E-value=54 Score=28.98 Aligned_cols=45 Identities=9% Similarity=0.014 Sum_probs=25.7
Q ss_pred chhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 54 PHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 54 Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
.+.+++.-+-++++|+|-|..+ |-+= .. -++.+|-.++++.+++.
T Consensus 31 ~~~l~~lv~~li~~Gv~gl~v~GtTGE-~~-----~Ls~~Er~~v~~~~~~~ 76 (318)
T 3qfe_A 31 LASQERYYAYLARSGLTGLVILGTNAE-AF-----LLTREERAQLIATARKA 76 (318)
T ss_dssp HHHHHHHHHHHHTTTCSEEEESSGGGT-GG-----GSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccC-hh-----hCCHHHHHHHHHHHHHH
Confidence 4567777777789999955443 3321 11 24545555555555443
No 79
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=69.08 E-value=53 Score=28.65 Aligned_cols=47 Identities=13% Similarity=0.062 Sum_probs=25.8
Q ss_pred CchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+== +-+.. -++.+|-.++++.+++.
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~Gt--tGE~~---~Ls~~Er~~v~~~~~~~ 65 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGT--TGESP---TLTEEEHKRVVALVAEQ 65 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSG--GGTGG---GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--ccchh---hCCHHHHHHHHHHHHHH
Confidence 4456777777778999996654321 11111 23445555555555543
No 80
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=68.58 E-value=8.1 Score=33.73 Aligned_cols=62 Identities=15% Similarity=0.208 Sum_probs=39.7
Q ss_pred hhHHhhhcCCCeEEe--eccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccccc
Q 024544 173 RVLILANSGADLIAF--ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 173 qi~~l~~~gvD~i~~--ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC 250 (266)
|+......|+|.+++ .+++ ..+++.+++.+++.+ +.+|++.. +.+++... .. .+++.||+|-
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~-~~~l~~l~~~a~~lG--l~~lvev~-----------t~ee~~~A-~~-~Gad~IGv~~ 190 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALE-QSVLVSMLDRTESLG--MTALVEVH-----------TEQEADRA-LK-AGAKVIGVNA 190 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSC-HHHHHHHHHHHHHTT--CEEEEEES-----------SHHHHHHH-HH-HTCSEEEEES
T ss_pred HHHHHHHcCCCEEEEecccCC-HHHHHHHHHHHHHCC--CcEEEEcC-----------CHHHHHHH-HH-CCCCEEEECC
Confidence 344455689999987 4555 457777888888765 67776652 23444332 23 4778888884
No 81
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=68.47 E-value=59 Score=28.23 Aligned_cols=47 Identities=17% Similarity=0.154 Sum_probs=26.2
Q ss_pred CchhHHHHhhhhhh-ccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLD-AGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~-AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-+++ +|++-|..+== +-+. .-++.+|-.++++.+++.
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~Gt--tGE~---~~Ls~~Er~~v~~~~~~~ 69 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGS--TGEN---FMLSTEEKKEIFRIAKDE 69 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSG--GGTG---GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCcc--ccch---hhCCHHHHHHHHHHHHHH
Confidence 44567777777788 99996654321 1111 124555555666655543
No 82
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=68.43 E-value=63 Score=28.71 Aligned_cols=46 Identities=11% Similarity=-0.008 Sum_probs=27.0
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ -.. -++.+|-.++++.+++.
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTG-E~~-----~Ls~eEr~~vi~~~ve~ 99 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTG-IYM-----YLTREERRRAIEAAATI 99 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTT-TGG-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc-Chh-----hCCHHHHHHHHHHHHHH
Confidence 44567777777889999966543 322 111 24555555666655543
No 83
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=68.42 E-value=3.8 Score=36.13 Aligned_cols=35 Identities=17% Similarity=0.139 Sum_probs=26.4
Q ss_pred HHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHH
Q 024544 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~ 203 (266)
+--.+++.++.++|+|.|++|-+|. ++++.+.+.+
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l 195 (275)
T 1o66_A 161 QALLNDAKAHDDAGAAVVLMECVLA-ELAKKVTETV 195 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCH-HHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHhC
Confidence 3344578899999999999999995 5666555543
No 84
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=67.95 E-value=59 Score=28.71 Aligned_cols=47 Identities=15% Similarity=0.086 Sum_probs=26.7
Q ss_pred CchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+== +-+. .-++.+|-.++.+.+++.
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~Gt--TGE~---~~Ls~~Er~~v~~~~v~~ 87 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGT--TGES---PTLTHEEHKRIIELCVEQ 87 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSST--TTTG---GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc--ccCc---cccCHHHHHHHHHHHHHH
Confidence 3457777777788999996654322 1111 124445555565555543
No 85
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=67.82 E-value=6 Score=35.09 Aligned_cols=62 Identities=10% Similarity=0.054 Sum_probs=39.5
Q ss_pred hhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccccc
Q 024544 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC 250 (266)
+++..+++|+|.|.+.+|+ +++++.+++.++. +.++.+|- |-+++.+..+.. .+++.|++-.
T Consensus 210 ea~eAl~aGaD~I~LDn~~-~~~l~~av~~~~~---~v~ieaSG----------GIt~~~i~~~a~--tGVD~IsvGa 271 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNFS-GEDIDIAVSIARG---KVALEVSG----------NIDRNSIVAIAK--TGVDFISVGA 271 (287)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHTT---TCEEEEES----------SCCTTTHHHHHT--TTCSEEECSH
T ss_pred HHHHHHHcCCCEEEEcCCC-HHHHHHHHHhhcC---CceEEEEC----------CCCHHHHHHHHH--cCCCEEEECh
Confidence 3344456899999999987 4788888887663 34555443 444544444333 4778777744
No 86
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=67.60 E-value=57 Score=28.33 Aligned_cols=47 Identities=19% Similarity=0.258 Sum_probs=26.1
Q ss_pred CchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+==..-.. -++.+|-.++.+.+++.
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~-----~Lt~~Er~~v~~~~~~~ 67 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESP-----TLTTDEKELILKTVIDL 67 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGG-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccc-----cCCHHHHHHHHHHHHHH
Confidence 345677777777899999655442111111 23445555566555543
No 87
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=67.46 E-value=46 Score=28.90 Aligned_cols=46 Identities=7% Similarity=0.063 Sum_probs=26.2
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ -.. .++.+|-.++++.+++.
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttG-E~~-----~Ls~~Er~~v~~~~~~~ 66 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTG-EAT-----TMTETERKETIKFVIDK 66 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGG-TGG-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc-Chh-----hCCHHHHHHHHHHHHHH
Confidence 45567777777789999965543 322 111 24445555666555543
No 88
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=67.10 E-value=65 Score=28.17 Aligned_cols=46 Identities=20% Similarity=0.171 Sum_probs=26.8
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ +. .-++.+|-.++++.+++.
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttG---E~---~~Ls~~Er~~v~~~~~~~ 81 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTG---ES---PTTTAAEKLELLKAVREE 81 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTT---TT---TTSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc---Ch---hhCCHHHHHHHHHHHHHH
Confidence 44567777777889999965543 322 11 134555555666655543
No 89
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=66.69 E-value=58 Score=28.47 Aligned_cols=47 Identities=19% Similarity=0.138 Sum_probs=26.7
Q ss_pred CchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+== +-+.. -++.+|-.++++.+++.
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~Gt--TGE~~---~Ls~eEr~~v~~~~~~~ 76 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGS--TGEAF---VQSLSEREQVLEIVAEE 76 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESST--TTTGG---GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECee--ccChh---hCCHHHHHHHHHHHHHH
Confidence 4456777777778999996654321 11111 24555555666555543
No 90
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=65.89 E-value=14 Score=32.36 Aligned_cols=76 Identities=14% Similarity=0.081 Sum_probs=46.8
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-eccc-----hhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+. ++.+++.+++.|||.|++ -|.. +.+|=+.+++.+.+. +.++||++... +.+..++
T Consensus 20 iD~~~----l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~a 86 (292)
T 3daq_A 20 VNLEA----LKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG---------TNDTEKS 86 (292)
T ss_dssp ECHHH----HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSCHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------cccHHHH
Confidence 56544 445678888899999864 2322 356766777766543 33689998763 3455667
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 87 i~la~~a~~~Gadavlv~ 104 (292)
T 3daq_A 87 IQASIQAKALGADAIMLI 104 (292)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 6655432 356665553
No 91
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=65.73 E-value=6.8 Score=34.97 Aligned_cols=61 Identities=20% Similarity=0.186 Sum_probs=39.6
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccccc
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC 250 (266)
++..+++|+|.|++.+|+ +++++.+++.++. ..++-+| -|-+++.+..+.. .+++.|++-.
T Consensus 220 ~~eAl~aGaDiImLDn~s-~~~l~~av~~~~~---~v~leaS----------GGIt~~~i~~~A~--tGVD~IsvGa 280 (300)
T 3l0g_A 220 VEESLSNNVDMILLDNMS-ISEIKKAVDIVNG---KSVLEVS----------GCVNIRNVRNIAL--TGVDYISIGC 280 (300)
T ss_dssp HHHHHHTTCSEEEEESCC-HHHHHHHHHHHTT---SSEEEEE----------SSCCTTTHHHHHT--TTCSEEECGG
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHhhcC---ceEEEEE----------CCCCHHHHHHHHH--cCCCEEEeCc
Confidence 344456899999999987 4788888887763 2333322 2455555544433 5788887766
No 92
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=65.47 E-value=71 Score=28.02 Aligned_cols=46 Identities=17% Similarity=0.227 Sum_probs=26.3
Q ss_pred CchhHHHHhhhhhhccccEEEe-chhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T-nTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|.. -|-+=. . -++.+|-.++.+.+++.
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~-~-----~Ls~~Er~~v~~~~~~~ 73 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILANFSEQ-F-----AITDDERDVLTRTILEH 73 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSGGGTG-G-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCc-c-----cCCHHHHHHHHHHHHHH
Confidence 3456777777778999994444 333211 1 24555555666655543
No 93
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=65.05 E-value=36 Score=29.91 Aligned_cols=79 Identities=18% Similarity=0.128 Sum_probs=42.5
Q ss_pred hhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCC------CceeecCch--HHHhhhHHh--hhhh
Q 024544 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD------GINVVSGDS--ILECASIAD--SCEQ 242 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~------~~~l~~G~~--~~~a~~~~~--~~~~ 242 (266)
-++.+.++|++.+-+|-- .|....++++.+.+ +||+--+-+.+ ++...-|.+ .+++++... +..|
T Consensus 118 a~rl~~eaGa~aVklEdg---~e~~~~I~al~~ag--IpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAG 192 (281)
T 1oy0_A 118 ATRFLKDGGAHAVKLEGG---ERVAEQIACLTAAG--IPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAG 192 (281)
T ss_dssp HHHHHHTTCCSEEEEEBS---GGGHHHHHHHHHHT--CCEEEEEECCC--------------CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCeEEEECCc---HHHHHHHHHHHHCC--CCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcC
Confidence 345566799999999975 46666677777655 88873222211 111122322 233333221 1257
Q ss_pred hhhcccccCCcchh
Q 024544 243 VVAVGINCTSPRFI 256 (266)
Q Consensus 243 ~~avGiNC~~p~~~ 256 (266)
+++|=+-|...+..
T Consensus 193 A~~ivlE~vp~~~a 206 (281)
T 1oy0_A 193 AFAVVMEMVPAELA 206 (281)
T ss_dssp CSEEEEESCCHHHH
T ss_pred CcEEEEecCCHHHH
Confidence 78888888754333
No 94
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=64.83 E-value=4.4 Score=35.84 Aligned_cols=40 Identities=28% Similarity=0.310 Sum_probs=28.9
Q ss_pred HHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccc
Q 024544 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~ 213 (266)
+--.+++.++.++|+|.|++|-+|. ++++.+.+.+ ++|++
T Consensus 179 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l-----~iP~i 218 (281)
T 1oy0_A 179 EQTIADAIAVAEAGAFAVVMEMVPA-ELATQITGKL-----TIPTV 218 (281)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCCH-HHHHHHHHHC-----SSCEE
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHhC-----CCCEE
Confidence 4444578899999999999999995 5566555543 26654
No 95
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=64.78 E-value=64 Score=28.02 Aligned_cols=45 Identities=13% Similarity=0.161 Sum_probs=25.5
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVE 103 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~ 103 (266)
+.+.+++.-+-++++|++-|..+ |-+ +. ..++.+|-.++++.+++
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttG---E~---~~Ls~~Er~~v~~~~~~ 67 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTG---EG---CSVGSRERQAILSSFIA 67 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTT---TG---GGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccc---Ch---hhCCHHHHHHHHHHHHH
Confidence 44567777777789999965543 322 11 12444555555555544
No 96
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=64.54 E-value=24 Score=30.96 Aligned_cols=50 Identities=18% Similarity=0.112 Sum_probs=35.5
Q ss_pred HHhhhhhHHhhhcC--CCeEEeec---cchhhhHHHHHHHHhhcCccc-cccee-eecC
Q 024544 168 EFHRRRVLILANSG--ADLIAFET---IPNKLEAKAYAELLEEEGITI-PAWFS-FNSK 219 (266)
Q Consensus 168 ~~~~~qi~~l~~~g--vD~i~~ET---~~~~~E~~a~~~a~~~~~~~~-Pv~iS-f~~~ 219 (266)
+.+...++.|.+.| +|.|-+.. .+...+++..++.+...+ + ||||| +.+.
T Consensus 185 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a~~G--~~pi~iTEldi~ 241 (303)
T 1i1w_A 185 QAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASAG--TPEVAITELDVA 241 (303)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHHTTC--CSEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHHHCC--CCeEEEEeCCcc
Confidence 34555777777777 59998865 445577788888777655 8 99998 5554
No 97
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=64.54 E-value=59 Score=28.70 Aligned_cols=25 Identities=12% Similarity=0.275 Sum_probs=18.2
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHH
Q 024544 174 VLILANSGADLIAFETIPNKLEAKA 198 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a 198 (266)
++.+.+.|+|.+.++.-.++.+++.
T Consensus 260 l~~l~~~g~d~~~~d~~~d~~~~~~ 284 (353)
T 1j93_A 260 LERLPLTGVDVVSLDWTVDMADGRR 284 (353)
T ss_dssp GGGGGGGCCSEEECCTTSCHHHHHH
T ss_pred HHHHHhcCCCEEEeCCCCCHHHHHH
Confidence 3456678999999997667766544
No 98
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=64.53 E-value=6.4 Score=34.93 Aligned_cols=39 Identities=23% Similarity=0.216 Sum_probs=28.1
Q ss_pred hhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
..++|+|+|.+-|+. +++++.+++.++...+++|+.+|-
T Consensus 213 A~~aGaD~I~ld~~~-~~~l~~~v~~l~~~~~~~~I~ASG 251 (299)
T 2jbm_A 213 AAEAGADLVLLDNFK-PEELHPTATVLKAQFPSVAVEASG 251 (299)
T ss_dssp HHHTTCSEEEEESCC-HHHHHHHHHHHHHHCTTSEEEEES
T ss_pred HHHcCCCEEEECCCC-HHHHHHHHHHhhccCCCeeEEEEC
Confidence 345799999999975 788888888776532346666554
No 99
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=64.49 E-value=80 Score=28.56 Aligned_cols=77 Identities=10% Similarity=0.027 Sum_probs=38.8
Q ss_pred hhhhhHHhhhcCCCeEEeec--c---chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhh
Q 024544 170 HRRRVLILANSGADLIAFET--I---PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVV 244 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET--~---~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~ 244 (266)
+.+.++.|.+.|+|+|-+=. . +..... ..++.+++.- ++||+..- |-+.+++...+.. ..++
T Consensus 257 ~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~-~~~~~ik~~~-~iPvi~~G----------gi~~~~a~~~l~~-g~aD 323 (377)
T 2r14_A 257 AFYLAGELDRRGLAYLHFNEPDWIGGDITYPE-GFREQMRQRF-KGGLIYCG----------NYDAGRAQARLDD-NTAD 323 (377)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC------CCCT-THHHHHHHHC-CSEEEEES----------SCCHHHHHHHHHT-TSCS
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCCCcchH-HHHHHHHHHC-CCCEEEEC----------CCCHHHHHHHHHC-CCce
Confidence 34457788889999996522 1 110011 1233344432 47876542 2235566665554 3466
Q ss_pred hccccc---CCcchhhhh
Q 024544 245 AVGINC---TSPRFIHGL 259 (266)
Q Consensus 245 avGiNC---~~p~~~~~~ 259 (266)
+|++-= ..|+...++
T Consensus 324 ~V~igR~~l~~P~l~~k~ 341 (377)
T 2r14_A 324 AVAFGRPFIANPDLPERF 341 (377)
T ss_dssp EEEESHHHHHCTTHHHHH
T ss_pred EEeecHHHHhCchHHHHH
Confidence 666532 356555443
No 100
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=64.41 E-value=29 Score=31.15 Aligned_cols=45 Identities=16% Similarity=0.152 Sum_probs=34.5
Q ss_pred HhhhhhHHhhhcC--CCeEEeec-----cchhhhHHHHHHHHh--hcCccccccee
Q 024544 169 FHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLE--EEGITIPAWFS 215 (266)
Q Consensus 169 ~~~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~a~~--~~~~~~Pv~iS 215 (266)
.+..+++.|.+.| +|.|-+.. .|+..+++.+++.+. ..+ +||+||
T Consensus 193 ~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~a~~~~G--l~i~IT 246 (348)
T 1w32_A 193 ALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALSPT--LKIKIT 246 (348)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTCSS--CEEEEE
T ss_pred HHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHHhcccCC--CeEEEE
Confidence 4556777787777 59987643 377889999998888 655 999998
No 101
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=64.38 E-value=73 Score=27.84 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=26.7
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+=. . -++.+|-.++.+.+++.
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~-~-----~Lt~~Er~~v~~~~~~~ 80 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGES-P-----TTTDGEKIELLRAVLEA 80 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccch-h-----hCCHHHHHHHHHHHHHH
Confidence 45677777777889999955443 33211 1 24555555666555543
No 102
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A
Probab=64.33 E-value=23 Score=33.96 Aligned_cols=46 Identities=13% Similarity=0.090 Sum_probs=35.3
Q ss_pred HHhhhhhHHhhhcC--CCeEEee-----ccchhhhHHHHHHHHhhcCccccccee
Q 024544 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 168 ~~~~~qi~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
+.+..+++.|.+.| +|.|-+. ..|++.+++.+++.+...+ +||+||
T Consensus 360 ~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~p~~~~i~~~L~~~a~lG--lpI~IT 412 (530)
T 1us2_A 360 TKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAAMKKVVDLG--LLVKIT 412 (530)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEE
T ss_pred HHHHHHHHHHHHCCCceeEEEEeeecCCCCCCHHHHHHHHHHHHhcC--CeEEEE
Confidence 34556777787777 5998774 3577889999998888765 999998
No 103
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=63.32 E-value=16 Score=32.12 Aligned_cols=75 Identities=12% Similarity=0.151 Sum_probs=46.8
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ |. .-+.+|=+.+++.+.+ .+.++||++... +.+..++
T Consensus 34 iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~st~~a 100 (304)
T 3cpr_A 34 IDIAAG----REVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG---------TNNTRTS 100 (304)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC---------CSCHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC---------CCCHHHH
Confidence 666554 44678888899999875 42 2345566677776554 333689887762 4456677
Q ss_pred hhHHhhh--hhhhhccc
Q 024544 234 ASIADSC--EQVVAVGI 248 (266)
Q Consensus 234 ~~~~~~~--~~~~avGi 248 (266)
++..+.. .+++++.+
T Consensus 101 i~la~~A~~~Gadavlv 117 (304)
T 3cpr_A 101 VELAEAAASAGADGLLV 117 (304)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEE
Confidence 7665432 45666555
No 104
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=63.06 E-value=16 Score=33.76 Aligned_cols=45 Identities=13% Similarity=0.155 Sum_probs=32.5
Q ss_pred HhhhhhHHhhhcCC--CeEEeec-----cchhhhHHHHHHHHhhcCccccccee
Q 024544 169 FHRRRVLILANSGA--DLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 169 ~~~~qi~~l~~~gv--D~i~~ET-----~~~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
.+...++.|.+.|+ |.|-+.. .|+..+++..++.+...+ +||+||
T Consensus 184 ~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~~~~~~~~~l~~~a~~g--~~v~iT 235 (436)
T 2d1z_A 184 GVYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALG--VDVAIT 235 (436)
T ss_dssp HHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTTT--CEEEEE
T ss_pred HHHHHHHHHHhCCCcccEEEEeeEEcCCCCCHHHHHHHHHHHHHcC--CeEEEe
Confidence 34456777777664 9997743 255678888888887765 899987
No 105
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=63.05 E-value=15 Score=32.65 Aligned_cols=74 Identities=19% Similarity=0.130 Sum_probs=46.5
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-e------ccchhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHH
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-E------TIPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILE 232 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-E------T~~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~ 232 (266)
++.+.++ .+++.+++.|||.|++ - |+ +.+|=+.+++.+.+ .+.++||++... +.+..+
T Consensus 40 iD~~~l~----~li~~li~~Gv~Gl~v~GtTGE~~~L-s~~Er~~v~~~~v~~~~grvpViaGvg---------~~st~~ 105 (315)
T 3si9_A 40 IDEKAFC----NFVEWQITQGINGVSPVGTTGESPTL-THEEHKRIIELCVEQVAKRVPVVAGAG---------SNSTSE 105 (315)
T ss_dssp BCHHHHH----HHHHHHHHTTCSEEECSSTTTTGGGS-CHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEeCccccCcccc-CHHHHHHHHHHHHHHhCCCCcEEEeCC---------CCCHHH
Confidence 6665544 4678888899999873 2 33 35666677776554 333689998763 345667
Q ss_pred hhhHHhhh--hhhhhccc
Q 024544 233 CASIADSC--EQVVAVGI 248 (266)
Q Consensus 233 a~~~~~~~--~~~~avGi 248 (266)
+++..+.. .+++++.+
T Consensus 106 ai~la~~A~~~Gadavlv 123 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLV 123 (315)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhcCCCEEEE
Confidence 77665432 45666555
No 106
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=62.93 E-value=66 Score=26.77 Aligned_cols=42 Identities=24% Similarity=0.279 Sum_probs=27.3
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEeeccc--------hhhhHHHHHHHH
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKAYAELL 203 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~--------~~~E~~a~~~a~ 203 (266)
...+.+.+..++..+...+.||. |.+|+.+ +..++..+++.+
T Consensus 126 ~~~~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~~ 175 (290)
T 2qul_A 126 PYVDRAIESVRRVIKVAEDYGII-YALEVVNRFEQWLCNDAKEAIAFADAV 175 (290)
T ss_dssp HHHHHHHHHHHTTHHHHHHHTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCE-EEEEeCccccccccCCHHHHHHHHHHc
Confidence 34566677777777777778995 5669875 455655555443
No 107
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=61.66 E-value=19 Score=31.39 Aligned_cols=77 Identities=13% Similarity=0.090 Sum_probs=47.1
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+. ++.+++.+++.|||.|++ |. .-+.+|-+.+++.+.+ .+.++||++... +.+..++
T Consensus 19 iD~~~----l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg---------~~~t~~a 85 (291)
T 3a5f_A 19 VDFDK----LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG---------SNNTAAS 85 (291)
T ss_dssp BCHHH----HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------cccHHHH
Confidence 55544 444678888899999865 32 2245566677776554 333689887763 3455677
Q ss_pred hhHHhhh--hhhhhccccc
Q 024544 234 ASIADSC--EQVVAVGINC 250 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiNC 250 (266)
++..+.. .+++++.+-.
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 6655432 4666665543
No 108
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=61.60 E-value=18 Score=32.97 Aligned_cols=76 Identities=17% Similarity=-0.024 Sum_probs=46.5
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----eccc-hhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETIP-NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET~~-~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+. ++..++.+++.|||.|++ |... +.+|=+.+++.+.+ .+.++||++... +.+..++
T Consensus 77 ID~~a----l~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------~~st~ea 143 (360)
T 4dpp_A 77 FDLEA----YDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTG---------SNSTREA 143 (360)
T ss_dssp BCHHH----HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC---------CSSHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecC---------CCCHHHH
Confidence 56554 444677888899998877 4221 35566667765544 333689987662 3456677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 144 i~la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 144 IHATEQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 7665432 355655553
No 109
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=61.59 E-value=82 Score=27.43 Aligned_cols=47 Identities=11% Similarity=0.198 Sum_probs=26.4
Q ss_pred CchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+==..-.. -++.+|-.++.+.+++.
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~ 72 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGESA-----TLTHEEHRTCIEIAVET 72 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTTGG-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHH
Confidence 345677777777899999665432111111 24555555565555543
No 110
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=61.47 E-value=83 Score=27.49 Aligned_cols=22 Identities=0% Similarity=-0.283 Sum_probs=15.6
Q ss_pred CchhHHHHhhhhhhccccEEEe
Q 024544 53 SPHLVRKVHLDYLDAGANIIIT 74 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T 74 (266)
+.+.+++.-+-++++|++-|..
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v 54 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVV 54 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 3456777777788999995543
No 111
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum}
Probab=61.43 E-value=44 Score=29.78 Aligned_cols=47 Identities=17% Similarity=0.252 Sum_probs=35.1
Q ss_pred HHhhhhhHHhhhcC--CCeEEee-------------ccchhhhHHHHHHHHhhcCcccccceee
Q 024544 168 EFHRRRVLILANSG--ADLIAFE-------------TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 168 ~~~~~qi~~l~~~g--vD~i~~E-------------T~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+.+...++.|.+.| +|.|-+. ..|++.+++..++.+...+ +||+||=
T Consensus 184 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~p~~~~~~~~l~~~a~lG--l~v~iTE 245 (327)
T 3u7b_A 184 EGAKRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPTPSRAKLASVLQGLADLG--VDVAYTE 245 (327)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCCCCHHHHHHHHHHHHTTT--CEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEEcccccccccccccCCCCCHHHHHHHHHHHHhcC--CceEEEe
Confidence 34556788888777 4887443 2577889999999888765 8999874
No 112
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=61.18 E-value=12 Score=33.73 Aligned_cols=60 Identities=12% Similarity=0.039 Sum_probs=39.2
Q ss_pred HHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccccc
Q 024544 175 LILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC 250 (266)
+..+++|+|.|.+.+|+ +++++.+++.++. +.++.+|- |-+++.+..+.. .+++.|++-.
T Consensus 245 ~eAl~aGaD~I~LDn~~-~~~l~~av~~l~~---~v~ieaSG----------GIt~~~I~~~a~--tGVD~isvGa 304 (320)
T 3paj_A 245 EEAISAGADIIMLDNFS-LEMMREAVKINAG---RAALENSG----------NITLDNLKECAE--TGVDYISVGA 304 (320)
T ss_dssp HHHHHTTCSEEEEESCC-HHHHHHHHHHHTT---SSEEEEES----------SCCHHHHHHHHT--TTCSEEECTH
T ss_pred HHHHHcCCCEEEECCCC-HHHHHHHHHHhCC---CCeEEEEC----------CCCHHHHHHHHH--cCCCEEEECc
Confidence 33445799999999985 6788888877652 34444443 455555544433 5788887755
No 113
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=61.17 E-value=14 Score=31.46 Aligned_cols=84 Identities=14% Similarity=0.055 Sum_probs=46.7
Q ss_pred hhhHHhhhcCCCeE---Eeeccchhh----hHHHHHHHHhhcCcccccceeeecCCCceeecCchH---HHhhhHHhhhh
Q 024544 172 RRVLILANSGADLI---AFETIPNKL----EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSI---LECASIADSCE 241 (266)
Q Consensus 172 ~qi~~l~~~gvD~i---~~ET~~~~~----E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~---~~a~~~~~~~~ 241 (266)
.+++...+.|+|.+ +..--++.. +++.+++++++.+ +|+++-... ++.++..|.+. .+++..+.+ .
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~~-~G~~l~~~~~~~~~~~~a~~a~~-~ 178 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMYP-RGKHIQNERDPELVAHAARLGAE-L 178 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEEE-CSTTCSCTTCHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeCC-CCcccCCCCCHhHHHHHHHHHHH-c
Confidence 45666777899998 555444433 4566677777654 787764322 22233334333 344344444 5
Q ss_pred hhhhccccc-CCcchhhhh
Q 024544 242 QVVAVGINC-TSPRFIHGL 259 (266)
Q Consensus 242 ~~~avGiNC-~~p~~~~~~ 259 (266)
+++.|+++= .+++.+..+
T Consensus 179 Gad~i~~~~~~~~~~l~~i 197 (273)
T 2qjg_A 179 GADIVKTSYTGDIDSFRDV 197 (273)
T ss_dssp TCSEEEECCCSSHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHH
Confidence 778888773 234444433
No 114
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=60.29 E-value=33 Score=29.46 Aligned_cols=42 Identities=10% Similarity=0.149 Sum_probs=27.7
Q ss_pred HHHHHHhhhhhHHhhhcCCCeEEeecc-------chhhhHHHHHHHHhh
Q 024544 164 ETLKEFHRRRVLILANSGADLIAFETI-------PNKLEAKAYAELLEE 205 (266)
Q Consensus 164 ~e~~~~~~~qi~~l~~~gvD~i~~ET~-------~~~~E~~a~~~a~~~ 205 (266)
+.+.+..++.++...+.||..|.+|++ .+..|+..+++.+++
T Consensus 154 ~~~~~~l~~l~~~a~~~Gv~~l~lE~~~~~~~~~~t~~~~~~l~~~v~~ 202 (316)
T 3qxb_A 154 AIARDMWIELAAYAKRQGLSMLYVEPVPLATEFPSSAADAARLMADLDG 202 (316)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCCSCTTBSSCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEEecCCccccCCCHHHHHHHHHHHhc
Confidence 445555666666666789986788993 356677777776643
No 115
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=60.05 E-value=18 Score=31.62 Aligned_cols=76 Identities=16% Similarity=0.094 Sum_probs=48.3
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEE-eeccc-----hhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIA-FETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~-~ET~~-----~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.++ .+++.+++.|||.|+ +-|.. +.+|-+.+++.+.+. +.++||++... +.+..++
T Consensus 19 iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~a 85 (291)
T 3tak_A 19 VDWKSLE----KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG---------ANSTREA 85 (291)
T ss_dssp BCHHHHH----HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHHH
T ss_pred cCHHHHH----HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC---------CCCHHHH
Confidence 6665544 467888889999775 34443 467777888766553 33689987662 3456677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 86 i~la~~a~~~Gadavlv~ 103 (291)
T 3tak_A 86 IELTKAAKDLGADAALLV 103 (291)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 7665432 466666553
No 116
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=59.93 E-value=73 Score=28.26 Aligned_cols=24 Identities=13% Similarity=-0.035 Sum_probs=16.9
Q ss_pred hHHhhhcCCCeEEeeccchhhhHH
Q 024544 174 VLILANSGADLIAFETIPNKLEAK 197 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~ 197 (266)
++.+.+.|+|.|.++.-.++.+++
T Consensus 258 l~~l~~~g~d~~~~d~~~d~~~~~ 281 (359)
T 2inf_A 258 AGDWHDLPLDVVGLDWRLGIDEAR 281 (359)
T ss_dssp HHHHHTSSCSEEECCTTSCHHHHH
T ss_pred HHHHHHhCCCEEEeCCCCCHHHHH
Confidence 345667899999998666665543
No 117
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=59.48 E-value=27 Score=30.51 Aligned_cols=76 Identities=13% Similarity=0.058 Sum_probs=47.8
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++++.++ .+++.+++.|||.|++ |. .-+.+|=+.+++.+.+. ..++||++... +.+..++
T Consensus 21 iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~a 87 (294)
T 3b4u_A 21 VDIDAMI----AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL---------VDSIEDA 87 (294)
T ss_dssp BCHHHHH----HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC---------CSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CccHHHH
Confidence 6665544 4678888899999875 31 22455767777766653 33689887763 3456677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 88 i~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLA 105 (294)
T ss_dssp HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 7665432 456665553
No 118
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=59.04 E-value=2.7 Score=26.88 Aligned_cols=18 Identities=22% Similarity=0.519 Sum_probs=14.9
Q ss_pred cccCchhHHHHhhhhhhc
Q 024544 50 LVSSPHLVRKVHLDYLDA 67 (266)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~A 67 (266)
+-++++.|.++|+.|+++
T Consensus 22 iknD~~Fl~~iHeAYl~s 39 (46)
T 2wx4_A 22 IQNDKEFANKLHKAYLNG 39 (46)
T ss_dssp HHHCTTHHHHHHHHHHC-
T ss_pred HHcCHHHHHHHHHHHHHH
Confidence 347899999999999975
No 119
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=58.91 E-value=27 Score=30.62 Aligned_cols=76 Identities=20% Similarity=0.096 Sum_probs=46.9
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ |. .-+.+|=+.+++.+.+ .+.++||++... +.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~a 84 (297)
T 2rfg_A 18 VDEKAL----AGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG---------SNNPVEA 84 (297)
T ss_dssp ECHHHH----HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC---------CCCHHHH
Confidence 666554 44678888899999865 32 2245566777776554 333689987763 3455677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 85 i~la~~A~~~Gadavlv~ 102 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCV 102 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 7655432 456665553
No 120
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A*
Probab=58.18 E-value=27 Score=33.38 Aligned_cols=48 Identities=15% Similarity=0.077 Sum_probs=33.6
Q ss_pred HhhhhhHHhhhcC-CCeEEeec--------cchhhhHHHHHHHHhhcCccccccee-eec
Q 024544 169 FHRRRVLILANSG-ADLIAFET--------IPNKLEAKAYAELLEEEGITIPAWFS-FNS 218 (266)
Q Consensus 169 ~~~~qi~~l~~~g-vD~i~~ET--------~~~~~E~~a~~~a~~~~~~~~Pv~iS-f~~ 218 (266)
.+...++.|.+.| +|.|-+.. ++++.+++..++.+...+ +||+|| +.+
T Consensus 395 ~~~~lv~~l~~~gvIdgiG~Q~H~~~~~~~~~~~~~~~~~l~~~a~~G--l~i~iTElDi 452 (540)
T 2w5f_A 395 CIASICANLYNKGLLDGVGMQSHINADMNGFSGIQNYKAALQKYINIG--CDVQITELDI 452 (540)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCEEESCSSSTTCHHHHHHHHHHHHTTT--SEEEEEEEEE
T ss_pred HHHHHHHHHHhCCcccEEEEeeEecCCCCCCCCHHHHHHHHHHHHhcC--CcEEEEeeee
Confidence 3445677777767 58774332 357788888888888765 899998 444
No 121
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=57.71 E-value=11 Score=33.55 Aligned_cols=61 Identities=15% Similarity=0.054 Sum_probs=39.0
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccccc
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC 250 (266)
++..+++|+|.|.+.+|+ +.+++.+++.+. .+.++.+|- |-+++.+..+.. .+++.|++-.
T Consensus 222 ~~eAl~aGaD~I~LDn~~-~~~l~~av~~i~---~~v~ieaSG----------GI~~~~i~~~a~--tGVD~isvG~ 282 (298)
T 3gnn_A 222 LRTALAHGARSVLLDNFT-LDMMRDAVRVTE---GRAVLEVSG----------GVNFDTVRAIAE--TGVDRISIGA 282 (298)
T ss_dssp HHHHHHTTCEEEEEESCC-HHHHHHHHHHHT---TSEEEEEES----------SCSTTTHHHHHH--TTCSEEECGG
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHhC---CCCeEEEEc----------CCCHHHHHHHHH--cCCCEEEECC
Confidence 343445899999999987 578888887663 234555444 344444444333 5788887766
No 122
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=57.56 E-value=45 Score=31.91 Aligned_cols=21 Identities=19% Similarity=0.275 Sum_probs=16.7
Q ss_pred HHhhhhhhccccEEEechhhh
Q 024544 59 KVHLDYLDAGANIIITASYQA 79 (266)
Q Consensus 59 ~iH~~Yl~AGAdiI~TnTy~a 79 (266)
+.-+.|+++|||.|..||...
T Consensus 351 ~~a~~~l~aGad~V~igt~~~ 371 (555)
T 1jvn_A 351 EVASLYFRSGADKVSIGTDAV 371 (555)
T ss_dssp HHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHHcCCCEEEECCHHh
Confidence 345678999999999998764
No 123
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=57.33 E-value=83 Score=27.41 Aligned_cols=47 Identities=19% Similarity=0.244 Sum_probs=27.1
Q ss_pred CchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+= .+-+.. -++.+|-.++.+.+++.
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~G--ttGE~~---~Ls~~Er~~v~~~~~~~ 69 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLG--STGEFA---YLGTAQREAVVRATIEA 69 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTS--GGGTGG---GCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc--cccCcc---ccCHHHHHHHHHHHHHH
Confidence 445677777777899999665442 222221 34555555666655544
No 124
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=57.29 E-value=1.1e+02 Score=27.39 Aligned_cols=73 Identities=14% Similarity=0.160 Sum_probs=41.7
Q ss_pred hHHHHHHHhhhhhHHhhhc--CCCeEEeeccc-------hhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHH
Q 024544 162 SLETLKEFHRRRVLILANS--GADLIAFETIP-------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILE 232 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~--gvD~i~~ET~~-------~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~ 232 (266)
..+.+.+..++.++...+. ||. |.+|+.+ .+.....+.+.+++.+ .|-.+.++++.......|.++.+
T Consensus 153 ~~~~~~e~L~~l~~~a~~~g~gv~-l~lE~~~~~~~~~~~~~t~~~~~~ll~~v~--~~~~vgl~lD~gH~~~~g~d~~~ 229 (387)
T 1bxb_A 153 VWDWVREALNFMAAYAEDQGYGYR-FALEPKPNEPRGDIYFATVGSMLAFIHTLD--RPERFGLNPEFAHETMAGLNFVH 229 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCE-EEECCCSSSSSSEESSCSHHHHHHHHTTSS--SGGGEEECCBHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcE-EEEecCCCCCCCCccCCCHHHHHHHHHHcC--CccceEEEEecCcccccCCCHHH
Confidence 4556667777666666665 785 5669986 2334455566666654 34324454432222345777776
Q ss_pred hhhHH
Q 024544 233 CASIA 237 (266)
Q Consensus 233 a~~~~ 237 (266)
.+..+
T Consensus 230 ~l~~~ 234 (387)
T 1bxb_A 230 AVAQA 234 (387)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66554
No 125
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=57.13 E-value=94 Score=27.27 Aligned_cols=47 Identities=26% Similarity=0.357 Sum_probs=26.2
Q ss_pred CchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|+|-|..+==..-.. -++.+|-.++++.+++.
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-----~Ls~eEr~~v~~~~v~~ 77 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCGNTSEFY-----ALSLEEAKEEVRRTVEY 77 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTSGGGTGG-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcc-----cCCHHHHHHHHHHHHHH
Confidence 345777777777899999665542211111 23445555555555443
No 126
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=56.94 E-value=28 Score=30.64 Aligned_cols=75 Identities=16% Similarity=0.184 Sum_probs=46.6
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-eccc-----hhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ -|-. +.+|=+.+++.+.+. ..++||++... +.+..++
T Consensus 26 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~a 92 (309)
T 3fkr_A 26 LDLASQ----KRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS---------HYSTQVC 92 (309)
T ss_dssp BCHHHH----HHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CchHHHH
Confidence 666554 44678888899998765 2322 356666777766543 33689998773 3455677
Q ss_pred hhHHhhh--hhhhhccc
Q 024544 234 ASIADSC--EQVVAVGI 248 (266)
Q Consensus 234 ~~~~~~~--~~~~avGi 248 (266)
++..+.. .+++++.+
T Consensus 93 i~la~~A~~~Gadavlv 109 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMA 109 (309)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 7665432 35566554
No 127
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=56.89 E-value=87 Score=27.93 Aligned_cols=72 Identities=19% Similarity=0.208 Sum_probs=38.2
Q ss_pred HHHHHHHhhhhhHHhhhcC--CCeEEeeccch-------hhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHh
Q 024544 163 LETLKEFHRRRVLILANSG--ADLIAFETIPN-------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 163 ~~e~~~~~~~qi~~l~~~g--vD~i~~ET~~~-------~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
.+.+.+..++..+...+.| |. |.+|+.+. +.....+.+.+++.+ -|-.+.++++..-....|.++.+.
T Consensus 154 ~~~~~e~L~~l~~~A~~~G~~v~-l~lE~~~~e~~~~~~~~t~~~~~~li~~v~--~pn~vgl~lD~~H~~~~g~d~~~~ 230 (386)
T 1muw_A 154 LDRMKEAFDLLGEYVTSQGYDIR-FAIEPKPNEPRGDILLPTVGHALAFIERLE--RPELYGVNPEVGHEQMAGLNFPHG 230 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCE-EEECCCSSSSSSEESSCSHHHHHHHHTTSS--SGGGEEECCBHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCeE-EEEeeCCCCCcccccCCCHHHHHHHHHHhC--CccceEEEeeccchhhcCCCHHHH
Confidence 4555666666666666678 54 56798852 234455556666544 342234444322223356666655
Q ss_pred hhHH
Q 024544 234 ASIA 237 (266)
Q Consensus 234 ~~~~ 237 (266)
+..+
T Consensus 231 l~~~ 234 (386)
T 1muw_A 231 IAQA 234 (386)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5443
No 128
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=56.88 E-value=96 Score=26.73 Aligned_cols=22 Identities=14% Similarity=0.351 Sum_probs=14.4
Q ss_pred CchhHHHHhhhhhhccccEEEe
Q 024544 53 SPHLVRKVHLDYLDAGANIIIT 74 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T 74 (266)
+.+.+++.-+-++++|++-|..
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v 38 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFV 38 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEE
Confidence 3455666666677888885544
No 129
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=56.76 E-value=28 Score=31.81 Aligned_cols=67 Identities=16% Similarity=0.224 Sum_probs=44.5
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEeecc---ch-hhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhH
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFETI---PN-KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~---~~-~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~ 236 (266)
.+.+.+...++- .+.+.+||.+++-.+ .. -.-++++++++++.+.++|+++.+ .|+..++..+.
T Consensus 293 a~~~~~~~~~~~---il~d~~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl---------~G~n~~~g~~~ 360 (388)
T 2nu8_B 293 ATKERVTEAFKI---ILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRL---------EGNNAELGAKK 360 (388)
T ss_dssp CCHHHHHHHHHH---HHTSTTCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------ESTTHHHHHHH
T ss_pred CCHHHHHHHHHH---HhcCCCCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEe---------CCCCHHHHHHH
Confidence 455655555542 245688999988553 22 344678889999865569999865 47777777666
Q ss_pred Hhh
Q 024544 237 ADS 239 (266)
Q Consensus 237 ~~~ 239 (266)
+..
T Consensus 361 l~~ 363 (388)
T 2nu8_B 361 LAD 363 (388)
T ss_dssp HHT
T ss_pred HHH
Confidence 654
No 130
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=56.59 E-value=23 Score=30.89 Aligned_cols=77 Identities=16% Similarity=0.065 Sum_probs=48.0
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ |. .-+.+|=+.+++.+.+. +.++||++... +.+..++
T Consensus 18 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~a 84 (292)
T 2vc6_A 18 IDEVAL----HDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG---------SNSTAEA 84 (292)
T ss_dssp ECHHHH----HHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CccHHHH
Confidence 666554 44678888899999875 32 22455667777766543 33689987763 3455677
Q ss_pred hhHHhhh--hhhhhccccc
Q 024544 234 ASIADSC--EQVVAVGINC 250 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiNC 250 (266)
++..+.. .+++++.+..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcC
Confidence 6655432 4667666654
No 131
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=56.52 E-value=22 Score=31.27 Aligned_cols=76 Identities=14% Similarity=0.126 Sum_probs=46.9
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +..++.+++.|||.|++ |. .-+.+|=+.+++.+.+ ...++||++... +.+..++
T Consensus 30 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg---------~~~t~~a 96 (301)
T 1xky_A 30 IDFAKT----TKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG---------SNNTHAS 96 (301)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSCHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC---------CCCHHHH
Confidence 666554 44678888899999875 32 2235666777776554 333689987762 3455677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 97 i~la~~A~~~Gadavlv~ 114 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLV 114 (301)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 6655432 466665553
No 132
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=55.87 E-value=1.5e+02 Score=31.20 Aligned_cols=64 Identities=20% Similarity=0.259 Sum_probs=46.8
Q ss_pred HHhhhhhHHhhhcCCCeEEee-c--cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+|+.+.++.+.++|+|.|.+= | +....++..+++++++. ..+-+++-+.++ .|..+..++..++
T Consensus 709 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~---~~~~i~~H~Hnd----~GlAvAn~laAv~ 775 (1165)
T 2qf7_A 709 KYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREA---TGLPIHFHTHDT----SGIAAATVLAAVE 775 (1165)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHH---CSSCEEEEECBT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHh---cCCeEEEEECCC----CCHHHHHHHHHHH
Confidence 567778888999999998665 3 33577888888888874 246678888776 5777776666655
No 133
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=55.83 E-value=24 Score=30.76 Aligned_cols=77 Identities=16% Similarity=0.047 Sum_probs=47.0
Q ss_pred chhHHHHHHHhhhhhHHhhhcCCCeEEe-ec----c-chhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHH
Q 024544 160 AVSLETLKEFHRRRVLILANSGADLIAF-ET----I-PNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILE 232 (266)
Q Consensus 160 ~~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET----~-~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~ 232 (266)
.++.+.+ +.+++.++++|||.|++ -| . -+.+|=+.+++.+.+ .+.++||++... +.+..+
T Consensus 17 ~iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 83 (289)
T 2yxg_A 17 EVDFDGL----EENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG---------SNCTEE 83 (289)
T ss_dssp EECHHHH----HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSSHHH
T ss_pred CcCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CCCHHH
Confidence 3666554 44678888899998865 22 1 234566677776554 333689987763 345567
Q ss_pred hhhHHhhh--hhhhhcccc
Q 024544 233 CASIADSC--EQVVAVGIN 249 (266)
Q Consensus 233 a~~~~~~~--~~~~avGiN 249 (266)
+++..+.. .+++++.+-
T Consensus 84 ai~la~~a~~~Gadavlv~ 102 (289)
T 2yxg_A 84 AIELSVFAEDVGADAVLSI 102 (289)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 76655432 466666554
No 134
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=55.79 E-value=28 Score=30.48 Aligned_cols=75 Identities=16% Similarity=0.119 Sum_probs=47.1
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-eccc-----hhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ -|.. +.+|=+.+++.+.+ .+.++||++... +.+..++
T Consensus 25 iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~a 91 (297)
T 3flu_A 25 IHYEQL----RDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG---------ANNTVEA 91 (297)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CcCHHHH
Confidence 666554 44678888899998765 3332 45676777776654 333689998762 3456677
Q ss_pred hhHHhhh--hhhhhccc
Q 024544 234 ASIADSC--EQVVAVGI 248 (266)
Q Consensus 234 ~~~~~~~--~~~~avGi 248 (266)
++..+.. .+++++.+
T Consensus 92 i~la~~a~~~Gadavlv 108 (297)
T 3flu_A 92 IALSQAAEKAGADYTLS 108 (297)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 7665432 45666555
No 135
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=55.56 E-value=1.1e+02 Score=26.86 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=26.7
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ -.. -++.+|-.++++.+++.
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~GtTG-E~~-----~Lt~~Er~~v~~~~v~~ 73 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLGILG-EAP-----KLDAAEAEAVATRFIKR 73 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESTGGG-TGG-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCccCc-Chh-----hCCHHHHHHHHHHHHHH
Confidence 34577777777889999955443 322 111 24445555666655543
No 136
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=55.37 E-value=1.1e+02 Score=27.47 Aligned_cols=73 Identities=19% Similarity=0.165 Sum_probs=41.0
Q ss_pred HHHHHHHhhhhhHHhhhc--CCCeEEeeccc-------hhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHh
Q 024544 163 LETLKEFHRRRVLILANS--GADLIAFETIP-------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 163 ~~e~~~~~~~qi~~l~~~--gvD~i~~ET~~-------~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
.+.+.+..++.++...+. ||. |.+|+.+ .+.....+.+.+++.+ .|-.+.++++..-....|.++.+.
T Consensus 154 ~~~~~e~L~~l~~~A~~~g~gv~-l~lE~~~~~~~~~~~~~t~~~~~~ll~~v~--~~~~vgl~lD~gH~~~~g~d~~~~ 230 (393)
T 1xim_A 154 LDRYREALNLLAQYSEDRGYGLR-FAIEPKPNEPRGDILLPTAGHAIAFVQELE--RPELFGINPETGHEQMSNLNFTQG 230 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCE-EEEECCSSSSSSEESSCSHHHHHHHHTTSS--SGGGEEECCBHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCcE-EEEecCCCCCCCCCcCCCHHHHHHHHHHhC--CccceEEEEccCCccccCCCHHHH
Confidence 445555666555555555 785 5669986 2234455666666654 343244544332223567777777
Q ss_pred hhHHh
Q 024544 234 ASIAD 238 (266)
Q Consensus 234 ~~~~~ 238 (266)
+..+.
T Consensus 231 l~~~~ 235 (393)
T 1xim_A 231 IAQAL 235 (393)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 66553
No 137
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=55.35 E-value=1e+02 Score=26.64 Aligned_cols=22 Identities=5% Similarity=0.138 Sum_probs=15.2
Q ss_pred CchhHHHHhhhhhhccccEEEe
Q 024544 53 SPHLVRKVHLDYLDAGANIIIT 74 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~T 74 (266)
+.+.+++.-+-++++|++-|..
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~ 39 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFV 39 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 4456777777778999985544
No 138
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=54.83 E-value=1.1e+02 Score=26.81 Aligned_cols=46 Identities=17% Similarity=0.150 Sum_probs=26.7
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+ +. ..++.+|-.++++.+++.
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTG---E~---~~Ls~eEr~~vi~~~~~~ 77 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTG---EF---YALTIEEAKQVATRVTEL 77 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGG---TG---GGSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccC---Ch---hhCCHHHHHHHHHHHHHH
Confidence 44567777777789999976654 322 11 124545555565555543
No 139
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=54.65 E-value=8.7 Score=32.54 Aligned_cols=47 Identities=21% Similarity=0.222 Sum_probs=34.2
Q ss_pred hhHHhhhcCCCeEEe-----eccchhhhHHHHHHHHhhc-CcccccceeeecC
Q 024544 173 RVLILANSGADLIAF-----ETIPNKLEAKAYAELLEEE-GITIPAWFSFNSK 219 (266)
Q Consensus 173 qi~~l~~~gvD~i~~-----ET~~~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~ 219 (266)
.++.+.++|+|++-+ -.+|++..-..+++.+|+. ++++|+-+-+.+.
T Consensus 22 ~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~ 74 (228)
T 3ovp_A 22 ECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVS 74 (228)
T ss_dssp HHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECS
T ss_pred HHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeC
Confidence 566677899999988 5668888777888888875 3456766655554
No 140
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=54.58 E-value=40 Score=29.31 Aligned_cols=47 Identities=15% Similarity=0.253 Sum_probs=32.2
Q ss_pred hhhhHHhhhcC--CCeEEeecc-----chhhhHHHHHHHHhhcCccccccee-eecC
Q 024544 171 RRRVLILANSG--ADLIAFETI-----PNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (266)
Q Consensus 171 ~~qi~~l~~~g--vD~i~~ET~-----~~~~E~~a~~~a~~~~~~~~Pv~iS-f~~~ 219 (266)
...++.+.+.| +|.|-+.+= |+..+++.+++.+...+ +|+||| +.+.
T Consensus 185 ~~~v~~l~~~G~~iDgIG~q~H~~~~~~~~~~~~~~l~~~a~~g--~pi~iTE~di~ 239 (302)
T 1nq6_A 185 YEMVKDFKQRGVPIDCVGFQSHFNSNSPVPSDFQANLQRFADLG--VDVQITELDIE 239 (302)
T ss_dssp HHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTTT--CEEEEEEEEEC
T ss_pred HHHHHHHHHCCCCcceEEEEEeecCCCCCHHHHHHHHHHHHhcC--CcEEEeeCCCC
Confidence 34667776666 699987522 34677888888777655 899998 4443
No 141
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=54.57 E-value=25 Score=30.87 Aligned_cols=76 Identities=22% Similarity=0.148 Sum_probs=47.3
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ |. .-+.+|=+.+++.+.+ .+.++||++... +.+..++
T Consensus 29 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg---------~~~t~~a 95 (303)
T 2wkj_A 29 LDKASL----RRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG---------CVSTAES 95 (303)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC---------CSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHHH
Confidence 666554 44678888899999875 32 2345566777776554 333689988662 3355677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 96 i~la~~A~~~Gadavlv~ 113 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAV 113 (303)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhCCCCEEEec
Confidence 7655432 466666554
No 142
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=54.40 E-value=17 Score=32.04 Aligned_cols=58 Identities=19% Similarity=0.174 Sum_probs=37.5
Q ss_pred HHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccc
Q 024544 175 LILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGi 248 (266)
+...++|+|+|++-.|+ ..+.+.+++.++. ++|+.+|- |-+++.+..+.. .+++.|++
T Consensus 210 ~eA~~aGaD~I~ld~~~-~~~~k~av~~v~~---~ipi~AsG----------GIt~eni~~~a~--tGvD~IsV 267 (286)
T 1x1o_A 210 EEALEAGADLILLDNFP-LEALREAVRRVGG---RVPLEASG----------NMTLERAKAAAE--AGVDYVSV 267 (286)
T ss_dssp HHHHHHTCSEEEEESCC-HHHHHHHHHHHTT---SSCEEEES----------SCCHHHHHHHHH--HTCSEEEC
T ss_pred HHHHHcCCCEEEECCCC-HHHHHHHHHHhCC---CCeEEEEc----------CCCHHHHHHHHH--cCCCEEEE
Confidence 33345799999999985 5677777766552 36666543 566666655444 46777666
No 143
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=54.39 E-value=77 Score=28.21 Aligned_cols=26 Identities=15% Similarity=0.240 Sum_probs=18.4
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHH
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAY 199 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~ 199 (266)
++.+.+.|+|.|-++.-.++.|++..
T Consensus 269 l~~l~~~g~d~i~~d~~~dl~~a~~~ 294 (367)
T 1r3s_A 269 LEELAQAGYEVVGLDWTVAPKKAREC 294 (367)
T ss_dssp HHHHTTSSCSEEECCTTSCHHHHHHH
T ss_pred HHHHHhcCCCEEEeCCCCCHHHHHHH
Confidence 34566789999998876677665443
No 144
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=54.19 E-value=33 Score=30.30 Aligned_cols=75 Identities=17% Similarity=0.138 Sum_probs=47.1
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-eccc-----hhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ -|.. +.+|-+.+++.+.+. +.++||++... +.+..++
T Consensus 42 iD~~~l----~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg---------~~~t~~a 108 (315)
T 3na8_A 42 LDLPAL----GRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS---------DLTTAKT 108 (315)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHHH
Confidence 666554 44678888899998764 2222 356777777766553 33689998762 3456677
Q ss_pred hhHHhhh--hhhhhccc
Q 024544 234 ASIADSC--EQVVAVGI 248 (266)
Q Consensus 234 ~~~~~~~--~~~~avGi 248 (266)
++..+.. .+++++.+
T Consensus 109 i~la~~A~~~Gadavlv 125 (315)
T 3na8_A 109 VRRAQFAESLGAEAVMV 125 (315)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEE
Confidence 7665432 45666555
No 145
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=54.05 E-value=98 Score=25.99 Aligned_cols=142 Identities=14% Similarity=0.133 Sum_probs=0.0
Q ss_pred chhHHHHHHHhcCCeEEeecchhhhHhhhCCCCCCccccccccccCc--hhHHHHhhhhhhccccEEEec----------
Q 024544 8 TTSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSP--HLVRKVHLDYLDAGANIIITA---------- 75 (266)
Q Consensus 8 ~~~~l~~~l~~~~~~lllDGg~gT~L~~~g~~~~~~lws~~~ll~~P--e~V~~iH~~Yl~AGAdiI~Tn---------- 75 (266)
|.+.+.+.|+ .+.+.|-.. .....+..+| +...++-+...++|+|+|.-+
T Consensus 1 ~~~~~~~~~~--------------~~~~~~~~~----~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg 62 (262)
T 1rd5_A 1 MSRPVSDTMA--------------ALMAKGKTA----FIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDG 62 (262)
T ss_dssp -CCCHHHHHH--------------HHHHTTCCE----EEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSC
T ss_pred CccHHHHHHH--------------HHHhcCCce----EEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCC
Q ss_pred -hhhhhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccccceEEEEecccccceecCCCccc
Q 024544 76 -SYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYS 154 (266)
Q Consensus 76 -Ty~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~ 154 (266)
+-+....+-...|++.+...++.++-.+. .+.++.+-....|
T Consensus 63 ~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-------------------------~~~Pv~~m~~~~~------------ 105 (262)
T 1rd5_A 63 PIIQASVARALASGTTMDAVLEMLREVTPE-------------------------LSCPVVLLSYYKP------------ 105 (262)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-------------------------CSSCEEEECCSHH------------
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-------------------------CCCCEEEEecCcH------------
Q ss_pred cCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCC
Q 024544 155 GDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG 221 (266)
Q Consensus 155 g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~ 221 (266)
.+..-++.+.++|+|.+.+-..+. .|++..++.+++.+ +++++-++....
T Consensus 106 --------------~~~~~~~~a~~aGadgv~v~d~~~-~~~~~~~~~~~~~g--~~~i~~~a~~t~ 155 (262)
T 1rd5_A 106 --------------IMFRSLAKMKEAGVHGLIVPDLPY-VAAHSLWSEAKNNN--LELVLLTTPAIP 155 (262)
T ss_dssp --------------HHSCCTHHHHHTTCCEEECTTCBT-TTHHHHHHHHHHTT--CEECEEECTTSC
T ss_pred --------------HHHHHHHHHHHcCCCEEEEcCCCh-hhHHHHHHHHHHcC--CceEEEECCCCC
No 146
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=54.02 E-value=26 Score=31.03 Aligned_cols=76 Identities=14% Similarity=0.099 Sum_probs=46.6
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-eccc-----hhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ -|.. +.+|-+.+++.+.+ .+.++||++... +.+..++
T Consensus 41 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg---------~~st~ea 107 (314)
T 3qze_A 41 LDWDSL----AKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG---------ANSTREA 107 (314)
T ss_dssp BCHHHH----HHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CcCHHHH
Confidence 666554 44677888899998765 2222 35676777776544 333689988662 3456677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 108 i~la~~A~~~Gadavlv~ 125 (314)
T 3qze_A 108 VALTEAAKSGGADACLLV 125 (314)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 7665432 456665553
No 147
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=53.91 E-value=1.1e+02 Score=27.13 Aligned_cols=127 Identities=9% Similarity=0.069 Sum_probs=74.0
Q ss_pred cCchhHHHHhhhhhhccccEEEechhhhhhhhhhc----cCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCC
Q 024544 52 SSPHLVRKVHLDYLDAGANIIITASYQATIQGFEA----KGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSG 127 (266)
Q Consensus 52 ~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~----~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~ 127 (266)
..|+..+++.+-.-+.|.+.|+..--- ..+.. ..++. ...+.+++.|+.|++
T Consensus 40 ~~~~~t~~m~~~i~~~G~N~vRipi~w---~~~~~~~~~g~~~~-~~l~~ld~vV~~a~~-------------------- 95 (340)
T 3qr3_A 40 NYPDGIGQMQHFVNEDGMTIFRLPVGW---QYLVNNNLGGNLDS-TSISKYDQLVQGCLS-------------------- 95 (340)
T ss_dssp CSCCHHHHHHHHHHHHCCCEEEEEECH---HHHTTTCTTCCCCH-HHHHHHHHHHHHHHH--------------------
T ss_pred cCCccHHHHHHHHHHCCCCEEEEEeeH---HHhCCCCCCCccCH-HHHHHHHHHHHHHHH--------------------
Confidence 378999999888889999999876521 12211 12332 234455555555443
Q ss_pred CccccceEEEEecccccceecCCCccccCC--CCchhHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhh---------H
Q 024544 128 RISSRPVLVAASVGSYGAYLADGSEYSGDY--GDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLE---------A 196 (266)
Q Consensus 128 ~~~~~~~~VaGsiGP~g~~l~~gseY~g~y--~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E---------~ 196 (266)
..++|.-.+=-+.. |.+.. ....+.+...++.+..++.+.+. +-|++|++..+.. .
T Consensus 96 ----~Gi~vIlDlH~~~~-------~~g~~~~~~~~~~~~~~~~w~~iA~ryk~~--~~Vi~el~NEP~~~~~~~w~~~~ 162 (340)
T 3qr3_A 96 ----LGAYCIVDIHNYAR-------WNGGIIGQGGPTNAQFTSLWSQLASKYASQ--SRVWFGIMNEPHDVNINTWAATV 162 (340)
T ss_dssp ----TTCEEEEEECSTTE-------ETTEETTTTSSCHHHHHHHHHHHHHHHTTC--TTEEEECCSCCCSSCHHHHHHHH
T ss_pred ----CCCEEEEEecCCcc-------cCCcccCCCHHHHHHHHHHHHHHHHHhCCC--CcEEEEecCCCCCCCHHHHHHHH
Confidence 13455554433221 11110 01135677888888888888763 4456999876542 3
Q ss_pred HHHHHHHhhcCcc-ccccee
Q 024544 197 KAYAELLEEEGIT-IPAWFS 215 (266)
Q Consensus 197 ~a~~~a~~~~~~~-~Pv~iS 215 (266)
+.++.++|+.+++ .+++|.
T Consensus 163 ~~~i~aIR~~~~~~~~Iiv~ 182 (340)
T 3qr3_A 163 QEVVTAIRNAGATSQFISLP 182 (340)
T ss_dssp HHHHHHHHHTTCCSSCEEEE
T ss_pred HHHHHHHHhhCCCccEEEEe
Confidence 4567788887655 466665
No 148
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=53.91 E-value=39 Score=29.87 Aligned_cols=75 Identities=16% Similarity=0.118 Sum_probs=47.0
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-eccc-----hhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ -|.. +.+|=+.+++.+.+ .+.++||++.. .+.+..++
T Consensus 29 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 95 (318)
T 3qfe_A 29 LDLASQ----ERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV---------GAHSTRQV 95 (318)
T ss_dssp ECHHHH----HHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC---------CCSSHHHH
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 666554 44678888899998764 3322 35666777776654 33468999866 23456777
Q ss_pred hhHHhhh--hhhhhccc
Q 024544 234 ASIADSC--EQVVAVGI 248 (266)
Q Consensus 234 ~~~~~~~--~~~~avGi 248 (266)
++..++. .+++++.+
T Consensus 96 i~la~~a~~~Gadavlv 112 (318)
T 3qfe_A 96 LEHINDASVAGANYVLV 112 (318)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 7665432 45666555
No 149
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=53.84 E-value=27 Score=30.41 Aligned_cols=77 Identities=16% Similarity=0.121 Sum_probs=47.2
Q ss_pred chhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHH
Q 024544 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILE 232 (266)
Q Consensus 160 ~~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~ 232 (266)
.++.+.+ +.+++.+++.|||.|++ |. .-+.+|=+.+++.+.+ .+.++||++... +.+..+
T Consensus 17 ~iD~~~l----~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 83 (294)
T 2ehh_A 17 EVDYEAL----GNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG---------GNATHE 83 (294)
T ss_dssp EECHHHH----HHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSCHHH
T ss_pred CcCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 3666554 44678888899999865 32 2245566677776554 333689887763 345567
Q ss_pred hhhHHhhh--hhhhhcccc
Q 024544 233 CASIADSC--EQVVAVGIN 249 (266)
Q Consensus 233 a~~~~~~~--~~~~avGiN 249 (266)
+++..+.. .+++++.+-
T Consensus 84 ai~la~~A~~~Gadavlv~ 102 (294)
T 2ehh_A 84 AVHLTAHAKEVGADGALVV 102 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 77655432 466665553
No 150
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=53.81 E-value=16 Score=32.11 Aligned_cols=75 Identities=13% Similarity=0.048 Sum_probs=46.2
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ecc-chhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET~-~~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ |.. -+.+|=+.+++.+.+. +.++||++... +.+..++
T Consensus 22 iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~a 88 (300)
T 3eb2_A 22 VRADVM----GRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA---------STSVADA 88 (300)
T ss_dssp BCHHHH----HHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE---------ESSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CCCHHHH
Confidence 666554 44678888899999863 311 1456767777766543 33689998763 3345666
Q ss_pred hhHHhhh--hhhhhccc
Q 024544 234 ASIADSC--EQVVAVGI 248 (266)
Q Consensus 234 ~~~~~~~--~~~~avGi 248 (266)
++..+.. .+++++.+
T Consensus 89 i~la~~a~~~Gadavlv 105 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILA 105 (300)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 6655432 35566555
No 151
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=53.74 E-value=29 Score=30.48 Aligned_cols=75 Identities=8% Similarity=-0.107 Sum_probs=47.2
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-ecc-----chhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETI-----PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~-----~~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+. ++.+++.+++.|||.|++ -|- -+.+|=+.+++.+.+. +.++||++... +.+..++
T Consensus 32 iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~a 98 (307)
T 3s5o_A 32 VDYGK----LEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG---------CESTQAT 98 (307)
T ss_dssp BCHHH----HHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC---------CSSHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC---------CCCHHHH
Confidence 66654 444678888999998864 221 1356767777776653 34689887662 3456677
Q ss_pred hhHHhhh--hhhhhccc
Q 024544 234 ASIADSC--EQVVAVGI 248 (266)
Q Consensus 234 ~~~~~~~--~~~~avGi 248 (266)
++..++. .+++++.+
T Consensus 99 i~la~~A~~~Gadavlv 115 (307)
T 3s5o_A 99 VEMTVSMAQVGADAAMV 115 (307)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 7665432 45666655
No 152
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=53.65 E-value=29 Score=30.42 Aligned_cols=76 Identities=13% Similarity=0.073 Sum_probs=47.7
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-eccc-----hhhhHHHHHHHHhhc-Cc-ccccceeeecCCCceeecCchHHH
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GI-TIPAWFSFNSKDGINVVSGDSILE 232 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~~-~~-~~Pv~iSf~~~~~~~l~~G~~~~~ 232 (266)
++.+.++ .+++.+++.|||.|++ -|.. +.+|=+.+++.+.+. +. ++||++... +.+..+
T Consensus 25 iD~~~l~----~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg---------~~~t~~ 91 (301)
T 3m5v_A 25 VDEQSYA----RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG---------SNATHE 91 (301)
T ss_dssp ECHHHHH----HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC---------CSSHHH
T ss_pred CCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC---------CCCHHH
Confidence 6665544 4677888899999876 2222 356767777766543 43 589988762 345667
Q ss_pred hhhHHhhh--hhhhhcccc
Q 024544 233 CASIADSC--EQVVAVGIN 249 (266)
Q Consensus 233 a~~~~~~~--~~~~avGiN 249 (266)
+++..+.. .+++++.+-
T Consensus 92 ai~la~~a~~~Gadavlv~ 110 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSV 110 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 77665432 456666554
No 153
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=53.51 E-value=32 Score=30.73 Aligned_cols=76 Identities=12% Similarity=0.025 Sum_probs=47.1
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++++.+ +.+++.+++.|||.|++ |. .-+.+|=+.+++.+.+. +.++||++... +.+..++
T Consensus 52 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------~~st~ea 118 (332)
T 2r8w_A 52 VDIEAF----SALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG---------ALRTDEA 118 (332)
T ss_dssp BCHHHH----HHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC---------CSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHHH
Confidence 666554 44677888899999875 32 22455667777766543 33689998763 3455677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 119 i~la~~A~~~Gadavlv~ 136 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLA 136 (332)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEC
Confidence 7655432 456665553
No 154
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=53.40 E-value=31 Score=30.34 Aligned_cols=77 Identities=16% Similarity=0.084 Sum_probs=48.0
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-eccc-----hhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +.+++.+++.|||.|++ -|.. +.+|=+.+++.+.+ .+.++||++... +.+..++
T Consensus 33 iD~~~l----~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~a 99 (304)
T 3l21_A 33 LDTATA----ARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG---------TYDTAHS 99 (304)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC---------CSCHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC---------CCCHHHH
Confidence 666554 44678888899998764 3322 35677777776654 333689998762 3445677
Q ss_pred hhHHhhh--hhhhhccccc
Q 024544 234 ASIADSC--EQVVAVGINC 250 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiNC 250 (266)
++..+.. .+++++.+-.
T Consensus 100 i~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 100 IRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 6665432 4666666543
No 155
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=53.00 E-value=29 Score=30.65 Aligned_cols=74 Identities=15% Similarity=0.058 Sum_probs=45.5
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-eccc-----hhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.+ +..++.+++.|||.|++ -|.. +.+|=+.+++.+.+. +.++||++... .+..++
T Consensus 30 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg----------~~t~~a 95 (316)
T 3e96_A 30 IDWHHY----KETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG----------YATSTA 95 (316)
T ss_dssp BCHHHH----HHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC----------SSHHHH
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC----------cCHHHH
Confidence 666554 44678888899999865 2221 356666777765543 33689987762 245666
Q ss_pred hhHHhhh--hhhhhccc
Q 024544 234 ASIADSC--EQVVAVGI 248 (266)
Q Consensus 234 ~~~~~~~--~~~~avGi 248 (266)
++..+.. .+++++.+
T Consensus 96 i~la~~A~~~Gadavlv 112 (316)
T 3e96_A 96 IELGNAAKAAGADAVMI 112 (316)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEE
Confidence 6655432 45666554
No 156
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=52.95 E-value=1.1e+02 Score=26.34 Aligned_cols=23 Identities=13% Similarity=0.268 Sum_probs=15.7
Q ss_pred CchhHHHHhhhhhhccccEEEec
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (266)
+.+.+++.-+-++++|++-|..+
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~ 40 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVN 40 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEET
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC
Confidence 44567777777788999865543
No 157
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=52.85 E-value=19 Score=31.28 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=27.2
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEee--ccch
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFE--TIPN 192 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~E--T~~~ 192 (266)
.+.+++.++-.+.++.|.+.|||+|++= |.+.
T Consensus 47 ks~~~i~~~~~~~~~~L~~~g~~~IVIACNTa~~ 80 (269)
T 3ist_A 47 RDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATA 80 (269)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCccH
Confidence 5789999999999999999999999874 5553
No 158
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=52.72 E-value=29 Score=30.28 Aligned_cols=76 Identities=9% Similarity=0.034 Sum_probs=46.5
Q ss_pred hhHHHHHHHhhhhhHHhhh-cCCCeEEe-----ec-cchhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHH
Q 024544 161 VSLETLKEFHRRRVLILAN-SGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILE 232 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~-~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~ 232 (266)
++++.++ .+++.+++ .|||.|++ |. .-+.+|=+.+++.+.+ .+.++||++... +.+..+
T Consensus 21 iD~~~l~----~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 87 (293)
T 1f6k_A 21 INEKGLR----QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG---------SVNLKE 87 (293)
T ss_dssp BCHHHHH----HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSCHHH
T ss_pred cCHHHHH----HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC---------CCCHHH
Confidence 6665544 46788888 99999865 31 1234566677776554 333689987762 345567
Q ss_pred hhhHHhhh--hhhhhcccc
Q 024544 233 CASIADSC--EQVVAVGIN 249 (266)
Q Consensus 233 a~~~~~~~--~~~~avGiN 249 (266)
+++..+.. .+++++.+-
T Consensus 88 ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAV 106 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 76655432 456665553
No 159
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=52.55 E-value=62 Score=28.30 Aligned_cols=50 Identities=16% Similarity=0.076 Sum_probs=35.0
Q ss_pred HHhhhhhHHhhhcC--CCeEEeec-----cchhhhHHHHHHHHhhcCccc-cccee-eecC
Q 024544 168 EFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITI-PAWFS-FNSK 219 (266)
Q Consensus 168 ~~~~~qi~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~a~~~~~~~~-Pv~iS-f~~~ 219 (266)
+.+...++.|.+.| +|.|-+.. .+...+++..++.+...+ + |+||| +.+.
T Consensus 184 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~~l~~~a~~G--~~pi~iTEldi~ 242 (303)
T 1ta3_B 184 QAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSSLANTG--VSEVAITELDIA 242 (303)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECTTCCCGGGHHHHHHHHHTTC--CSEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCCcceEEEeeecCCCCCCHHHHHHHHHHHHHCC--CCeEEEeeCCcC
Confidence 44556778777777 59997643 233478888888888765 8 99998 5554
No 160
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=52.27 E-value=19 Score=33.97 Aligned_cols=66 Identities=12% Similarity=0.059 Sum_probs=39.6
Q ss_pred hhhhHHhhhcCCCeEEeecc-chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccc
Q 024544 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGi 248 (266)
.++++.+.++|+|+|.+-+- ++...+...++.+++..+++|+++.. ..+.+++.. +.+ .++++|-+
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~----------v~t~e~a~~-l~~-aGaD~I~v 297 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN----------IATAEAAKA-LAE-AGADAVKV 297 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHH-HHH-TTCSEEEE
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee----------eCcHHHHHH-HHH-cCCCEEEE
Confidence 34678888999999988643 33344455666666543367888732 233444433 333 46777665
No 161
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=52.11 E-value=17 Score=31.18 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=15.6
Q ss_pred hhhhHHhhhcCCCeEEeec
Q 024544 171 RRRVLILANSGADLIAFET 189 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET 189 (266)
.+.++.|.++|+|+|-+-.
T Consensus 34 ~~~~~~l~~~GaD~ieig~ 52 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGV 52 (268)
T ss_dssp HHHHHHHHHTTCSSEEEEC
T ss_pred HHHHHHHHHCCCCEEEECC
Confidence 3467888899999999876
No 162
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=52.04 E-value=18 Score=31.44 Aligned_cols=27 Identities=15% Similarity=0.023 Sum_probs=20.1
Q ss_pred CchhHHHHhhhhhhccccEEEechhhh
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQA 79 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a 79 (266)
..+...++-+.-.++|.++|..-+|..
T Consensus 24 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~ 50 (295)
T 1ydn_A 24 PTADKIALINRLSDCGYARIEATSFVS 50 (295)
T ss_dssp CHHHHHHHHHHHTTTTCSEEEEEECSC
T ss_pred CHHHHHHHHHHHHHcCcCEEEEccCcC
Confidence 345566667777889999999877754
No 163
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=51.98 E-value=1e+02 Score=28.46 Aligned_cols=73 Identities=14% Similarity=0.193 Sum_probs=37.0
Q ss_pred HHHHHHHhhhhhHHhhhcCCC-eEEeeccch-------hhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhh
Q 024544 163 LETLKEFHRRRVLILANSGAD-LIAFETIPN-------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (266)
Q Consensus 163 ~~e~~~~~~~qi~~l~~~gvD-~i~~ET~~~-------~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~ 234 (266)
.+.+.+..++.++...+.||+ .|++|.+|. +.....+++.+++.+ .|-.+.++++-.-....|.++.+.+
T Consensus 205 ~~~~~e~L~~~~~~A~~~Gv~v~l~IEp~p~~~~~~~~~~t~~~al~li~~vg--~pn~vgv~lDt~H~~~~g~di~~~i 282 (438)
T 1a0c_A 205 LDNFARFLHMAVDYAKEIGFEGQFLIEPKPKEPTKHQYDFDVANVLAFLRKYD--LDKYFKVNIEANHATLAFHDFQHEL 282 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSEEEECCCSCSSSSEESSCSHHHHHHHHHHTT--CTTTEEEEEEHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCCCCCcccCCHHHHHHHHHHcC--CCCeEEEEEEhhhhhhcCCCHHHHH
Confidence 344555555555555567876 788898742 222334444444433 3322334333222234566666665
Q ss_pred hHH
Q 024544 235 SIA 237 (266)
Q Consensus 235 ~~~ 237 (266)
..+
T Consensus 283 ~~~ 285 (438)
T 1a0c_A 283 RYA 285 (438)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 164
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=51.39 E-value=12 Score=32.25 Aligned_cols=89 Identities=19% Similarity=0.123 Sum_probs=53.8
Q ss_pred hhHHhhhcCCCeEEe-----eccchhhhHHHHHHHHhhcCcccccceeeecCCCc-------------eeec---CchHH
Q 024544 173 RVLILANSGADLIAF-----ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI-------------NVVS---GDSIL 231 (266)
Q Consensus 173 qi~~l~~~gvD~i~~-----ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~-------------~l~~---G~~~~ 231 (266)
.++.+.++|+|++-+ -.+|++..-..+++.+|+..+++|+-+-+.+.+.. -+.. ...+.
T Consensus 45 ~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~ 124 (246)
T 3inp_A 45 DVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHID 124 (246)
T ss_dssp HHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCSCHH
T ss_pred HHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccccchhHH
Confidence 567777889998877 45688888888888888754357776666655321 1222 22444
Q ss_pred HhhhHHhhhhhhhhcccccCC-cchhhhhhe
Q 024544 232 ECASIADSCEQVVAVGINCTS-PRFIHGLIL 261 (266)
Q Consensus 232 ~a~~~~~~~~~~~avGiNC~~-p~~~~~~l~ 261 (266)
.++..+++..--.+|-+|... .+.+..++.
T Consensus 125 ~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~ 155 (246)
T 3inp_A 125 RSLQLIKSFGIQAGLALNPATGIDCLKYVES 155 (246)
T ss_dssp HHHHHHHTTTSEEEEEECTTCCSGGGTTTGG
T ss_pred HHHHHHHHcCCeEEEEecCCCCHHHHHHHHh
Confidence 555555542212356678754 455555554
No 165
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=51.32 E-value=64 Score=27.45 Aligned_cols=41 Identities=12% Similarity=0.073 Sum_probs=26.3
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccc--------hhhhHHHHHHHH
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKAYAELL 203 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~--------~~~E~~a~~~a~ 203 (266)
..+.+.+..++.++...+.||. |.+|+++ +..++..+++.+
T Consensus 145 ~~~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v 193 (309)
T 2hk0_A 145 DYARGVEGINGIADFANDLGIN-LCIEVLNRFENHVLNTAAEGVAFVKDV 193 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCE-EEEeecccccccccCCHHHHHHHHHHc
Confidence 4455666666666666678985 6679984 456666555544
No 166
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=51.32 E-value=23 Score=26.17 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=30.8
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhc
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEE 206 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~ 206 (266)
+.+++...-...++.|-+.|+|.|++|.+|.-..-.++..-+++.
T Consensus 53 ~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~kA 97 (105)
T 2yv4_A 53 SVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRKA 97 (105)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHHh
Confidence 445544434445677777899999999999987777777666653
No 167
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=50.96 E-value=31 Score=30.31 Aligned_cols=77 Identities=17% Similarity=0.125 Sum_probs=47.5
Q ss_pred chhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHH
Q 024544 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILE 232 (266)
Q Consensus 160 ~~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~ 232 (266)
.++.+.+ +..++.+++.|||.|++ |. .-+.+|=+.+++.+.+. +.++||++... +.+..+
T Consensus 29 ~iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg---------~~st~~ 95 (306)
T 1o5k_A 29 ELDLESY----ERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG---------TNSTEK 95 (306)
T ss_dssp EECHHHH----HHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSCHHH
T ss_pred CcCHHHH----HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC---------CccHHH
Confidence 3666554 44678888899998865 32 22455667777766543 33689987762 345567
Q ss_pred hhhHHhhh--hhhhhcccc
Q 024544 233 CASIADSC--EQVVAVGIN 249 (266)
Q Consensus 233 a~~~~~~~--~~~~avGiN 249 (266)
+++..+.. .+++++.+-
T Consensus 96 ai~la~~A~~~Gadavlv~ 114 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVV 114 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 76655432 466666553
No 168
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=50.83 E-value=64 Score=28.74 Aligned_cols=48 Identities=13% Similarity=0.172 Sum_probs=32.4
Q ss_pred HhhhhhHHhhhcC--CCeEEeec-----cchh--hhHHHHHHHHhhcCccccccee-eec
Q 024544 169 FHRRRVLILANSG--ADLIAFET-----IPNK--LEAKAYAELLEEEGITIPAWFS-FNS 218 (266)
Q Consensus 169 ~~~~qi~~l~~~g--vD~i~~ET-----~~~~--~E~~a~~~a~~~~~~~~Pv~iS-f~~ 218 (266)
.+..+++.|.+.| +|.|-+.. .+.. .+++..++.+...+ +||||| +.+
T Consensus 210 ~~~~~v~~l~~~G~~idgiG~Q~H~~~~~~~~~~~~~~~~l~~~a~~G--~pi~iTEldi 267 (347)
T 1xyz_A 210 AVFNMIKSMKERGVPIDGVGFQCHFINGMSPEYLASIDQNIKRYAEIG--VIVSFTEIDI 267 (347)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECCEEESSCCHHHHHHHHHHHHHHHHTT--CEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCcceEEEeeecCCCCCchhHHHHHHHHHHHHhcC--CceEEEeccc
Confidence 4555677777777 59987642 2322 57888888888765 899998 443
No 169
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=50.75 E-value=22 Score=32.52 Aligned_cols=40 Identities=20% Similarity=0.294 Sum_probs=25.4
Q ss_pred cccCchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHH
Q 024544 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (266)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~ 94 (266)
.++.|+-...+++ |-+.|||+++| |+ +..+++.|++.+.+
T Consensus 81 DLk~~~Gr~~l~~--Lv~~ADV~ien-fr--Pg~~~rlGl~ye~L 120 (385)
T 4ed9_A 81 DFRTEEGRELVRR--LVAEADVVIEN-FK--LGGLDKYGLDYESL 120 (385)
T ss_dssp CTTSHHHHHHHHH--HHHTCSEEEEC-CC--TTTTGGGTCSHHHH
T ss_pred cCCCHHHHHHHHH--HHHhCCEEEEC-CC--ccHHHHhCCCHHHH
Confidence 4466664443332 34569999999 43 56678889986543
No 170
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=50.67 E-value=24 Score=30.76 Aligned_cols=76 Identities=18% Similarity=0.139 Sum_probs=47.1
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+.++ .+++.+++.|||.|++ |. .-+.+|=+.+++.+.+ .+.++||++... +.+..++
T Consensus 19 iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~a 85 (292)
T 2ojp_A 19 VCRASLK----KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG---------ANATAEA 85 (292)
T ss_dssp BCHHHHH----HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CccHHHH
Confidence 6665544 4677888899999875 32 2245566777776654 333689887762 3456677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 86 i~la~~a~~~Gadavlv~ 103 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTV 103 (292)
T ss_dssp HHHHHHTTTSSCSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEC
Confidence 7665432 456665553
No 171
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=50.65 E-value=83 Score=26.96 Aligned_cols=85 Identities=15% Similarity=0.110 Sum_probs=48.3
Q ss_pred hhHHhhhcCCCeEEeeccc--------hhhhHHHHHHHHhhc----CcccccceeeecCCCceeecC-----chHHHhhh
Q 024544 173 RVLILANSGADLIAFETIP--------NKLEAKAYAELLEEE----GITIPAWFSFNSKDGINVVSG-----DSILECAS 235 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~~--------~~~E~~a~~~a~~~~----~~~~Pv~iSf~~~~~~~l~~G-----~~~~~a~~ 235 (266)
-++.|.++|++.+-+|--. +.+|...-++++++. + .|++|.-..+. .+ .| ..++++++
T Consensus 98 ~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g--~~~~v~aRtd~--~~-~g~~~~~~~~~~ai~ 172 (255)
T 2qiw_A 98 LIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAG--VDVVINGRTDA--VK-LGADVFEDPMVEAIK 172 (255)
T ss_dssp HHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECH--HH-HCTTTSSSHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcC--CCeEEEEEech--hh-ccCCcchHHHHHHHH
Confidence 3555667999999999764 123444444444443 4 68766554332 11 12 23666665
Q ss_pred HHhh--hhhhhhcccccCC-cchhhhhhee
Q 024544 236 IADS--CEQVVAVGINCTS-PRFIHGLILS 262 (266)
Q Consensus 236 ~~~~--~~~~~avGiNC~~-p~~~~~~l~~ 262 (266)
.... ..|+++|=+-|.. ++.+..+-+.
T Consensus 173 ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~ 202 (255)
T 2qiw_A 173 RIKLMEQAGARSVYPVGLSTAEQVERLVDA 202 (255)
T ss_dssp HHHHHHHHTCSEEEECCCCSHHHHHHHHTT
T ss_pred HHHHHHHcCCcEEEEcCCCCHHHHHHHHHh
Confidence 4432 2577888888874 4555555443
No 172
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=50.10 E-value=1.4e+02 Score=26.62 Aligned_cols=23 Identities=4% Similarity=0.131 Sum_probs=16.5
Q ss_pred CchhHHHHhhhhhhccccEEEec
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (266)
+.+.+++.-+-++++|++-|..+
T Consensus 45 D~~~l~~lv~~li~~Gv~Gl~v~ 67 (344)
T 2hmc_A 45 DFDALVRKGKELIADGMSAVVYC 67 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEES
T ss_pred CHHHHHHHHHHHHHcCCCEEEeC
Confidence 45567777777889999955443
No 173
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=50.05 E-value=50 Score=27.35 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=20.6
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccc
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIP 191 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~ 191 (266)
..+.+.+..++.++...+.||. |.+|+.+
T Consensus 116 ~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~ 144 (281)
T 3u0h_A 116 YISQLARRIRQVAVELLPLGMR-VGLEYVG 144 (281)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCE-EEEECCC
T ss_pred hHHHHHHHHHHHHHHHHHcCCE-EEEEecc
Confidence 4556667777777777788997 5569874
No 174
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=50.04 E-value=22 Score=33.67 Aligned_cols=43 Identities=12% Similarity=0.049 Sum_probs=29.3
Q ss_pred hhhHHhhhcCCCeEEeeccc-hhhhHHHHHHHHhhcCcccccce
Q 024544 172 RRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~-~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
++++.+.++|+|+|.+-+-. +...+...++.+++..+++|+++
T Consensus 234 ~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~ 277 (496)
T 4fxs_A 234 ERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIG 277 (496)
T ss_dssp HHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEE
Confidence 45788888999999987543 33344455666666434688887
No 175
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=49.70 E-value=1.3e+02 Score=26.08 Aligned_cols=85 Identities=13% Similarity=0.123 Sum_probs=46.7
Q ss_pred hHHhhhcCCCeEEeeccc--------hhhhH----HHHHHHHhhcCcccccceeeecCCCceeecCc----hHHHhhhHH
Q 024544 174 VLILANSGADLIAFETIP--------NKLEA----KAYAELLEEEGITIPAWFSFNSKDGINVVSGD----SILECASIA 237 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~--------~~~E~----~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~----~~~~a~~~~ 237 (266)
++.|.++||+.+-+|-.. +.+|. ++++++.+..+ .|++|.-..+.-. ...|. .++++++..
T Consensus 98 v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g--~~~~i~aRtda~~-~~~g~~~~~~~~~ai~Ra 174 (275)
T 2ze3_A 98 VEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASG--VPVFLNARTDTFL-KGHGATDEERLAETVRRG 174 (275)
T ss_dssp HHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHT--SCCEEEEECCTTT-TTCSSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcC--CCeEEEEechhhh-ccccccchhhHHHHHHHH
Confidence 455667999999999764 23343 34444433324 6776665443211 00122 466676544
Q ss_pred hh--hhhhhhcccccCC-cchhhhhhe
Q 024544 238 DS--CEQVVAVGINCTS-PRFIHGLIL 261 (266)
Q Consensus 238 ~~--~~~~~avGiNC~~-p~~~~~~l~ 261 (266)
.. ..|+++|=+-|.. ++.+..+-+
T Consensus 175 ~ay~eAGAd~i~~e~~~~~~~~~~i~~ 201 (275)
T 2ze3_A 175 QAYADAGADGIFVPLALQSQDIRALAD 201 (275)
T ss_dssp HHHHHTTCSEEECTTCCCHHHHHHHHH
T ss_pred HHHHHCCCCEEEECCCCCHHHHHHHHH
Confidence 32 2477777778863 455555444
No 176
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=49.66 E-value=7.8 Score=35.02 Aligned_cols=25 Identities=36% Similarity=0.493 Sum_probs=22.4
Q ss_pred ccCchhHHHHhhhhhhccccEEEec
Q 024544 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (266)
++....|.+.+..+-+||||+|+|.
T Consensus 305 iD~~~~v~Esl~~~kRAGAd~IiTY 329 (342)
T 1h7n_A 305 VDLKTIAFESHQGFLRAGARLIITY 329 (342)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEEee
Confidence 5677899999999999999999974
No 177
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=49.59 E-value=7.4 Score=35.02 Aligned_cols=25 Identities=32% Similarity=0.321 Sum_probs=22.4
Q ss_pred ccCchhHHHHhhhhhhccccEEEec
Q 024544 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (266)
++....|.+.+..+-+||||+|+|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (330)
T 1pv8_A 294 FDLKAAVLEAMTAFRRAGADIIITY 318 (330)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 5777899999999999999999974
No 178
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=49.51 E-value=8 Score=34.68 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=22.4
Q ss_pred ccCchhHHHHhhhhhhccccEEEec
Q 024544 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (266)
++....|.+.+..+-+||||+|+|.
T Consensus 287 iD~~~~vlEsl~~~kRAGAd~IiTY 311 (323)
T 1l6s_A 287 IDEEKVVLESLGSIKRAGADLIFSY 311 (323)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeeh
Confidence 5777899999999999999999974
No 179
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=49.21 E-value=18 Score=31.56 Aligned_cols=31 Identities=13% Similarity=0.180 Sum_probs=26.7
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEee--ccc
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFE--TIP 191 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~E--T~~ 191 (266)
-+.+++.++-.+.++.|.+.|||+|++= |.+
T Consensus 66 ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~ 98 (274)
T 3uhf_A 66 KDKDTIIKFCLEALDFFEQFQIDMLIIACNTAS 98 (274)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChh
Confidence 5789999999999999999999999874 554
No 180
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=49.03 E-value=85 Score=28.07 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=33.7
Q ss_pred HHhhhhhHHhhhcC--CCeEEeecc-----chhhhHHHHHHHHhhcCcccccceee
Q 024544 168 EFHRRRVLILANSG--ADLIAFETI-----PNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 168 ~~~~~qi~~l~~~g--vD~i~~ET~-----~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+.+...++.|.+.| +|.|-+..= +...+++..++.+...+ +||+||=
T Consensus 203 ~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~~~~~~~~~~~l~~~a~lG--l~v~iTE 256 (341)
T 3niy_A 203 NFVYNMIKELKEKGVPVDGIGFQMHIDYRGLNYDSFRRNLERFAKLG--LQIYITE 256 (341)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEETTCCCHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEeeeeecCCCCCCHHHHHHHHHHHHHcC--CeEEEEe
Confidence 34566788888877 598876631 22467888888888765 8999874
No 181
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=48.91 E-value=32 Score=30.37 Aligned_cols=75 Identities=19% Similarity=0.119 Sum_probs=46.2
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEee-c-----cchhhhHHHHHHHHhh-cCcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFE-T-----IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~E-T-----~~~~~E~~a~~~a~~~-~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
+|.+.+ +..++.+++.|||.|++= | .-+.+|=+.+++.+.+ .+.++||++... + +..++
T Consensus 30 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg---------~-st~~a 95 (314)
T 3d0c_A 30 IDWKGL----DDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG---------Y-SVDTA 95 (314)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC---------S-SHHHH
T ss_pred CCHHHH----HHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC---------c-CHHHH
Confidence 666554 446788888999998642 2 2245566677776554 333689998762 3 56677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 96 i~la~~A~~~Gadavlv~ 113 (314)
T 3d0c_A 96 IELGKSAIDSGADCVMIH 113 (314)
T ss_dssp HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 7655432 456665553
No 182
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=48.69 E-value=54 Score=28.83 Aligned_cols=75 Identities=13% Similarity=0.130 Sum_probs=46.7
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-ecc-----chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ETI-----PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~-----~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~ 234 (266)
++++.+ +.+++.++++|||.|++ -|. -+.+|=+.+++.+.+...++||++... +.+..+++
T Consensus 26 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg---------~~~t~~ai 92 (313)
T 3dz1_A 26 IDDVSI----DRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVS---------APGFAAMR 92 (313)
T ss_dssp BCHHHH----HHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECC---------CSSHHHHH
T ss_pred cCHHHH----HHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecC---------CCCHHHHH
Confidence 666554 44678888899998765 222 235566677776554323689988662 34566777
Q ss_pred hHHhhh--hhhhhccc
Q 024544 235 SIADSC--EQVVAVGI 248 (266)
Q Consensus 235 ~~~~~~--~~~~avGi 248 (266)
+..+.. .+++++.+
T Consensus 93 ~la~~A~~~Gadavlv 108 (313)
T 3dz1_A 93 RLARLSMDAGAAGVMI 108 (313)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 665432 46666655
No 183
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=48.60 E-value=31 Score=30.95 Aligned_cols=76 Identities=16% Similarity=0.140 Sum_probs=47.1
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
+|.+.++ ..++.+++.|||.|++ |. .-+.+|=+.+++.+.+. ..++||++... +.+..++
T Consensus 49 ID~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------~~st~ea 115 (343)
T 2v9d_A 49 LDKPGTA----ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG---------GTNARET 115 (343)
T ss_dssp BCHHHHH----HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------SSCHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHHH
Confidence 6665544 4678888899999875 31 22455666777766543 33689987763 3456677
Q ss_pred hhHHhhh--hhhhhcccc
Q 024544 234 ASIADSC--EQVVAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~~avGiN 249 (266)
++..+.. .+++++.+-
T Consensus 116 i~la~~A~~~Gadavlv~ 133 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVI 133 (343)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEC
Confidence 6655432 466666554
No 184
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=48.50 E-value=8 Score=34.75 Aligned_cols=25 Identities=28% Similarity=0.332 Sum_probs=22.4
Q ss_pred ccCchhHHHHhhhhhhccccEEEec
Q 024544 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (266)
++....|.+.+..+-+||||+|+|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (328)
T 1w1z_A 294 IDEDRVMMESLLCMKRAGADIIFTY 318 (328)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 5777899999999999999999974
No 185
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=47.36 E-value=1e+02 Score=27.74 Aligned_cols=75 Identities=15% Similarity=0.076 Sum_probs=37.3
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhcccc
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiN 249 (266)
+...++.|.+.|+|+|-+=.-..-.+ .++.+|+. .++|++..-. -+.+++...+.. ..++.|++-
T Consensus 244 ~~~la~~l~~~Gvd~i~v~~~~~~~~---~~~~ik~~-~~iPvi~~Gg----------it~e~a~~~l~~-g~aD~V~iG 308 (362)
T 4ab4_A 244 FTYVARELGKRGIAFICSREREADDS---IGPLIKEA-FGGPYIVNER----------FDKASANAALAS-GKADAVAFG 308 (362)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCCTTC---CHHHHHHH-HCSCEEEESS----------CCHHHHHHHHHT-TSCSEEEES
T ss_pred HHHHHHHHHHhCCCEEEECCCCCCHH---HHHHHHHH-CCCCEEEeCC----------CCHHHHHHHHHc-CCccEEEEC
Confidence 44467788889999996532111111 22333332 1367765432 234555555553 345555552
Q ss_pred c---CCcchhhhh
Q 024544 250 C---TSPRFIHGL 259 (266)
Q Consensus 250 C---~~p~~~~~~ 259 (266)
= ..|+...++
T Consensus 309 R~~lanPdl~~k~ 321 (362)
T 4ab4_A 309 VPFIANPDLPARL 321 (362)
T ss_dssp HHHHHCTTHHHHH
T ss_pred HHhHhCcHHHHHH
Confidence 2 245554443
No 186
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=47.21 E-value=18 Score=34.03 Aligned_cols=86 Identities=12% Similarity=0.142 Sum_probs=51.1
Q ss_pred hhHHhhhcCCCeEE-eeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhh--hhhhhhcccc
Q 024544 173 RVLILANSGADLIA-FETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS--CEQVVAVGIN 249 (266)
Q Consensus 173 qi~~l~~~gvD~i~-~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~--~~~~~avGiN 249 (266)
-++...++|+|.|- |-..+++..++.+++++++.+ ..+.+++++.+.. -.+++.++..++. ..+++.|.+-
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G--~~v~~~i~~~~~~----~~~~e~~~~~a~~l~~~Gad~I~l~ 178 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMG--AHAQGTLCYTTSP----VHNLQTWVDVAQQLAELGVDSIALK 178 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTT--CEEEEEEECCCCT----TCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCC--CEEEEEEEeeeCC----CCCHHHHHHHHHHHHHCCCCEEEEc
Confidence 35667788999885 446677788888888888876 5554455433322 1244444443332 1455555552
Q ss_pred ----cCCcchhhhhheeee
Q 024544 250 ----CTSPRFIHGLILSVR 264 (266)
Q Consensus 250 ----C~~p~~~~~~l~~l~ 264 (266)
...|..+..+++.++
T Consensus 179 DT~G~~~P~~v~~lv~~l~ 197 (464)
T 2nx9_A 179 DMAGILTPYAAEELVSTLK 197 (464)
T ss_dssp ETTSCCCHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHH
Confidence 234877777776554
No 187
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=46.96 E-value=27 Score=31.77 Aligned_cols=44 Identities=14% Similarity=0.019 Sum_probs=29.1
Q ss_pred hhhhHHhhhcCCCeEEeec-cchhhhHHHHHHHHhhcCcccccce
Q 024544 171 RRRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
.++++.+.++|+|+|.+-+ ..+...+...++.+|+..+++|+++
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~ 146 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMA 146 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEE
Confidence 4467888999999888754 3333344456666776422588887
No 188
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=46.91 E-value=15 Score=31.57 Aligned_cols=19 Identities=11% Similarity=0.230 Sum_probs=15.3
Q ss_pred hhhhHHhhhcCCCeEEeec
Q 024544 171 RRRVLILANSGADLIAFET 189 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET 189 (266)
.+.++.|.++|||.|-+-+
T Consensus 34 ~~~~~~l~~~G~D~IElG~ 52 (262)
T 2ekc_A 34 LKAFKEVLKNGTDILEIGF 52 (262)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 3457788899999998875
No 189
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=46.88 E-value=1.5e+02 Score=26.18 Aligned_cols=18 Identities=22% Similarity=0.172 Sum_probs=13.7
Q ss_pred hhhhHHhhhcCCCeEEee
Q 024544 171 RRRVLILANSGADLIAFE 188 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~E 188 (266)
...++.|.+.|+|+|-+=
T Consensus 242 ~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 242 LAFARRLKELGVDLLDCS 259 (349)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 346778888999998753
No 190
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=46.43 E-value=21 Score=30.91 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=25.3
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEee
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFE 188 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~E 188 (266)
-+.+++.++-.+.++.|.+.|||+|++=
T Consensus 49 ~~~~~i~~~~~~~~~~L~~~g~~~iVIA 76 (268)
T 3out_A 49 KSRATIQKFAAQTAKFLIDQEVKAIIIA 76 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 5789999999999999999999999885
No 191
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=46.38 E-value=21 Score=32.47 Aligned_cols=19 Identities=16% Similarity=-0.125 Sum_probs=14.7
Q ss_pred hhhHHhh-hcCCCeEEeecc
Q 024544 172 RRVLILA-NSGADLIAFETI 190 (266)
Q Consensus 172 ~qi~~l~-~~gvD~i~~ET~ 190 (266)
..+..|. +.+||.|.+|.-
T Consensus 255 ~i~~~l~~~~~~d~i~lE~~ 274 (375)
T 1ypx_A 255 PVAETLFGKLNIDGFFLEYD 274 (375)
T ss_dssp GGGHHHHTTCCCSEEEEECC
T ss_pred HHHHHHHhhCCCCEEEEEec
Confidence 4566676 899999999943
No 192
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A*
Probab=46.26 E-value=58 Score=28.43 Aligned_cols=45 Identities=11% Similarity=0.091 Sum_probs=30.3
Q ss_pred HhhhhhHHhhhcC--CCeEEeeccc----hhhhHHHHHHHHhhcCccccccee
Q 024544 169 FHRRRVLILANSG--ADLIAFETIP----NKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 169 ~~~~qi~~l~~~g--vD~i~~ET~~----~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
.+...++.|.+.| +|.|-+..=. ...+++..++.+...+ +|||||
T Consensus 182 ~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~l~~~a~~g--~pv~iT 232 (315)
T 3cui_A 182 SLYDLVKDFKARGVPLDCVGFQSHLIVGQVPGDFRQNLQRFADLG--VDVRIT 232 (315)
T ss_dssp HHHHHHHHHHHHTCCCCEEEECCEEETTCCCTTHHHHHHHHHTTT--CEEEEE
T ss_pred HHHHHHHHHHHCCCcccEEEeeeecCCCCCHHHHHHHHHHHHhcC--CceEEE
Confidence 4445667676667 5998775421 2457777787777654 899997
No 193
>2wx3_A MRNA-decapping enzyme 1A; structural protein, trimerization module, P-BODY component, asymmetric assembly; 2.31A {Homo sapiens}
Probab=45.93 E-value=7.9 Score=25.24 Aligned_cols=18 Identities=17% Similarity=0.396 Sum_probs=15.6
Q ss_pred cccCchhHHHHhhhhhhc
Q 024544 50 LVSSPHLVRKVHLDYLDA 67 (266)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~A 67 (266)
+-++++.|.+||+.|+..
T Consensus 24 IqnD~~Fl~~IHeAYl~s 41 (51)
T 2wx3_A 24 IKNDSSFLSTLHEVYLQV 41 (51)
T ss_dssp HHHCHHHHHHHHHHHHHT
T ss_pred HHcCHHHHHHHHHHHHHH
Confidence 347899999999999976
No 194
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=45.76 E-value=9.2 Score=34.70 Aligned_cols=25 Identities=28% Similarity=0.325 Sum_probs=22.3
Q ss_pred ccCchhHHHHhhhhhhccccEEEec
Q 024544 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (266)
++....|.+.+..+-+||||+|+|.
T Consensus 308 iD~~~~v~Esl~~~kRAGAd~IiTY 332 (356)
T 3obk_A 308 ISEKDTVLEVLKSFRRAGADAVATY 332 (356)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHHcCCCEEehh
Confidence 5677899999999999999999974
No 195
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=45.67 E-value=1.4e+02 Score=25.32 Aligned_cols=33 Identities=12% Similarity=0.177 Sum_probs=23.1
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcC
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEG 207 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~ 207 (266)
++.+.++|+|.+++=-.+. +|+...++.+++.+
T Consensus 115 ~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g 147 (268)
T 1qop_A 115 YARCEQVGVDSVLVADVPV-EESAPFRQAALRHN 147 (268)
T ss_dssp HHHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcC
Confidence 4556678899777766653 56777777777765
No 196
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=45.56 E-value=11 Score=33.95 Aligned_cols=24 Identities=21% Similarity=0.286 Sum_probs=21.7
Q ss_pred ccCchhHHHHhhhhhhccccEEEec
Q 024544 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (266)
++ ...|.+.+..+-+||||+|+|.
T Consensus 301 iD-~~~v~Esl~~~kRAGAd~IiTY 324 (337)
T 1w5q_A 301 LA-ESVILESLTAFKRAGADGILTY 324 (337)
T ss_dssp SC-TTHHHHHHHHHHHHTCSEEEET
T ss_pred cc-HHHHHHHHHHHHhcCCCEEeee
Confidence 57 7799999999999999999974
No 197
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=45.50 E-value=30 Score=29.06 Aligned_cols=33 Identities=27% Similarity=0.325 Sum_probs=24.8
Q ss_pred HHhhhcCCCeEEeeccchhhhHHHHHHHHhhcC
Q 024544 175 LILANSGADLIAFETIPNKLEAKAYAELLEEEG 207 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~ 207 (266)
+.+.+.|+|++-+=......-++++++.+++.+
T Consensus 85 ~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g 117 (228)
T 3m47_A 85 RATFKAGADAIIVHGFPGADSVRACLNVAEEMG 117 (228)
T ss_dssp HHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcC
Confidence 455568999998876666666788888887765
No 198
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=45.38 E-value=85 Score=28.32 Aligned_cols=75 Identities=11% Similarity=0.006 Sum_probs=38.0
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhcccc
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiN 249 (266)
+...++.|.+.|+|+|-+=.-..-.+ .++.+|+. .++|++..- |-+.+++...+.. ..++.|++-
T Consensus 252 ~~~la~~l~~~Gvd~i~v~~~~~~~~---~~~~ik~~-~~iPvi~~G----------git~e~a~~~l~~-G~aD~V~iG 316 (361)
T 3gka_A 252 FGHVARELGRRRIAFLFARESFGGDA---IGQQLKAA-FGGPFIVNE----------NFTLDSAQAALDA-GQADAVAWG 316 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSTTC---CHHHHHHH-HCSCEEEES----------SCCHHHHHHHHHT-TSCSEEEES
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCHH---HHHHHHHH-cCCCEEEeC----------CCCHHHHHHHHHc-CCccEEEEC
Confidence 44467788889999996532111111 22334432 136776543 2235556555554 345665552
Q ss_pred ---cCCcchhhhh
Q 024544 250 ---CTSPRFIHGL 259 (266)
Q Consensus 250 ---C~~p~~~~~~ 259 (266)
...|+...++
T Consensus 317 R~~ladPdl~~k~ 329 (361)
T 3gka_A 317 KLFIANPDLPRRF 329 (361)
T ss_dssp HHHHHCTTHHHHH
T ss_pred HHhHhCcHHHHHH
Confidence 2356554444
No 199
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=45.24 E-value=33 Score=31.06 Aligned_cols=43 Identities=21% Similarity=0.167 Sum_probs=26.2
Q ss_pred hHHhhhcCCCeEEee-------c--------cchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 174 VLILANSGADLIAFE-------T--------IPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 174 i~~l~~~gvD~i~~E-------T--------~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
++.+.++|+|+|.+- | .|.+.-+..+.+++++. ++|++.+.-+
T Consensus 159 A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~--~iPVIA~GGI 216 (361)
T 3khj_A 159 TKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKF--GIPIIADGGI 216 (361)
T ss_dssp HHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHH--TCCEEEESCC
T ss_pred HHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhc--CCeEEEECCC
Confidence 456778999999872 1 34444444444445543 4898876643
No 200
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=44.21 E-value=25 Score=32.49 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=39.9
Q ss_pred hhhhHHhhhcCCCeEEeeccc-hhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccc
Q 024544 171 RRRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~~-~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGi 248 (266)
.++++.++++|||+|.+.|-. +...+...++.+++.. ++|+++.- -.+.+++.. +.+ .++++|.+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~-~i~Vi~g~----------V~t~e~A~~-a~~-aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGN----------VVTEEATKE-LIE-NGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC-CCEEEEEE----------ECSHHHHHH-HHH-TTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC-CCeEEEee----------cCCHHHHHH-HHH-cCCCEEEE
Confidence 457889999999999987543 3444555666666642 47887621 123444433 333 46777666
No 201
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=44.21 E-value=28 Score=32.54 Aligned_cols=66 Identities=17% Similarity=0.145 Sum_probs=40.9
Q ss_pred hhhhHHhhhcCCCeEEeecc-chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccc
Q 024544 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGi 248 (266)
.++++.+.++|+|.+.+-+. .+.......++.+++.-+++|+++. .+.+.+++.. +.+ .++++|-+
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g----------~~~t~e~a~~-l~~-~G~d~I~v 305 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG----------NVATPEGTEA-LIK-AGADAVKV 305 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE----------EECSHHHHHH-HHH-TTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC----------CcCCHHHHHH-HHH-cCCCEEEE
Confidence 45788899999999988543 3344455666667664335888762 2455665533 333 46666655
No 202
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=43.78 E-value=30 Score=30.13 Aligned_cols=46 Identities=20% Similarity=0.170 Sum_probs=32.2
Q ss_pred hhhhhHHhhhcC-CCeEEeeccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 170 HRRRVLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 170 ~~~qi~~l~~~g-vD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
|.+.++..++.| ||+|=+|-...-+.++.+++.+++.+ .++++|+-
T Consensus 121 ~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~--~kvI~S~H 167 (276)
T 3o1n_A 121 YIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN--VAVIMSNH 167 (276)
T ss_dssp HHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhCC--CEEEEEee
Confidence 444555566677 99999997665555666666666644 78999985
No 203
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=43.63 E-value=1.7e+02 Score=25.71 Aligned_cols=85 Identities=14% Similarity=0.111 Sum_probs=49.5
Q ss_pred hhHHHH---HHHhhhhhHHhhhcCCCeEEeecc----------ch---------------hhhHHHHHHHHhhcCccccc
Q 024544 161 VSLETL---KEFHRRRVLILANSGADLIAFETI----------PN---------------KLEAKAYAELLEEEGITIPA 212 (266)
Q Consensus 161 ~~~~e~---~~~~~~qi~~l~~~gvD~i~~ET~----------~~---------------~~E~~a~~~a~~~~~~~~Pv 212 (266)
++.+|+ .+.|.+-++.+.++|.|.|=+--- |. ..-+..+++++++.- +.|+
T Consensus 134 mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv 212 (338)
T 1z41_A 134 MSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPL 212 (338)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcE
Confidence 555554 456666677778899999854321 11 122345666666654 6888
Q ss_pred ceeeecCCCceeecCchHHHhhhHHhh--hhhhhhccc
Q 024544 213 WFSFNSKDGINVVSGDSILECASIADS--CEQVVAVGI 248 (266)
Q Consensus 213 ~iSf~~~~~~~l~~G~~~~~a~~~~~~--~~~~~avGi 248 (266)
.+-++..+. ...|.+.++++..+.. ..+++.|-+
T Consensus 213 ~vris~~~~--~~~g~~~~~~~~~a~~l~~~Gvd~i~v 248 (338)
T 1z41_A 213 FVRVSASDY--TDKGLDIADHIGFAKWMKEQGVDLIDC 248 (338)
T ss_dssp EEEEECCCC--STTSCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEecCccc--CCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 888876432 2246667666555432 245665554
No 204
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=43.30 E-value=2.3e+02 Score=27.18 Aligned_cols=87 Identities=16% Similarity=0.138 Sum_probs=49.7
Q ss_pred chhHHH---HHHHhhhhhHHhhhcCCCeEEeecc----------c---------------hhhhHHHHHHHHhhc-Cccc
Q 024544 160 AVSLET---LKEFHRRRVLILANSGADLIAFETI----------P---------------NKLEAKAYAELLEEE-GITI 210 (266)
Q Consensus 160 ~~~~~e---~~~~~~~qi~~l~~~gvD~i~~ET~----------~---------------~~~E~~a~~~a~~~~-~~~~ 210 (266)
.+|.+| +.+.|.+-++...++|.|.|=+=-- | ...-+..+++++++. +.+.
T Consensus 130 ~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~ 209 (671)
T 1ps9_A 130 ELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDF 209 (671)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCc
Confidence 355555 4556666677778899999854211 1 112244555666653 5578
Q ss_pred ccceeeecCCCceeecCchHHHhhhHHhh--hhhhhhccc
Q 024544 211 PAWFSFNSKDGINVVSGDSILECASIADS--CEQVVAVGI 248 (266)
Q Consensus 211 Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~--~~~~~avGi 248 (266)
|+++-++..+. ...|.++++++..+.. ..+++.|.+
T Consensus 210 ~v~vrls~~~~--~~~g~~~~~~~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 210 IIIYRLSMLDL--VEDGGTFAETVELAQAIEAAGATIINT 247 (671)
T ss_dssp EEEEEEEEECC--STTCCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred eEEEEECcccc--CCCCCCHHHHHHHHHHHHhcCCCEEEc
Confidence 88887775432 1246777766554432 245666544
No 205
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=43.15 E-value=36 Score=29.28 Aligned_cols=42 Identities=17% Similarity=0.184 Sum_probs=29.4
Q ss_pred hHHhhhcC-CCeEEeeccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 174 VLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 174 i~~l~~~g-vD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
++.+.+.| ||++=+|-...-+-.+.+++..++.+ ..+++|+.
T Consensus 105 l~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~--~kiI~S~H 147 (258)
T 4h3d_A 105 NKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKE--VKVIISNH 147 (258)
T ss_dssp HHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred HHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhCC--CEEEEEEe
Confidence 34444444 99999997666555667777777644 78999995
No 206
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=43.09 E-value=98 Score=27.25 Aligned_cols=26 Identities=15% Similarity=0.318 Sum_probs=18.8
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHH
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAY 199 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~ 199 (266)
++.+.+.|+|.|-++...++.|++..
T Consensus 256 l~~l~~~g~d~i~~d~~~dl~~~~~~ 281 (354)
T 3cyv_A 256 LEAMAETGCDALGLDWTTDIADARRR 281 (354)
T ss_dssp HHHHHTTSCSEEECCTTSCHHHHHHH
T ss_pred HHHHHhcCCCEEEeCCCCCHHHHHHH
Confidence 45566789999999866677765443
No 207
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=42.78 E-value=28 Score=28.75 Aligned_cols=48 Identities=17% Similarity=0.221 Sum_probs=28.9
Q ss_pred hhhHHhhhcCCCeEEee-----ccchhhhHHHHHHHHhhcCcccccceeeecCC
Q 024544 172 RRVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~ 220 (266)
+.++.+.++|+|++-+- .+++.......++.+++.. +.|+.+-+.+.+
T Consensus 27 ~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~-~~~~~v~l~vnd 79 (230)
T 1rpx_A 27 EQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT-DLPLDVHLMIVE 79 (230)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC-CSCEEEEEESSS
T ss_pred HHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc-CCcEEEEEEecC
Confidence 35677888999988663 3354443344555566542 467766665553
No 208
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=42.71 E-value=57 Score=29.84 Aligned_cols=66 Identities=17% Similarity=0.231 Sum_probs=42.3
Q ss_pred hhHHHHHHHhhhhhHHh-hhcCCCeEEeecc---chh-hhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhh
Q 024544 161 VSLETLKEFHRRRVLIL-ANSGADLIAFETI---PNK-LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l-~~~gvD~i~~ET~---~~~-~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~ 235 (266)
.+.+.+... ++.+ .+.+||.+++--+ .+. .=++++++++++.+.++|+++.+ .|+..++..+
T Consensus 300 a~~e~~~~a----l~~il~d~~v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~Pivvrl---------~G~n~~~g~~ 366 (395)
T 2fp4_B 300 VKESQVYQA----FKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRL---------EGTNVHEAQN 366 (395)
T ss_dssp CCHHHHHHH----HHHHHHCTTCCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------EETTHHHHHH
T ss_pred CCHHHHHHH----HHHHhCCCCCCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCeEEEEc---------CCCCHHHHHH
Confidence 355554444 3433 4678999986443 333 34678889999865569999855 4776666666
Q ss_pred HHhh
Q 024544 236 IADS 239 (266)
Q Consensus 236 ~~~~ 239 (266)
.+..
T Consensus 367 ~L~~ 370 (395)
T 2fp4_B 367 ILTN 370 (395)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 209
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=42.14 E-value=1.6e+02 Score=25.16 Aligned_cols=25 Identities=8% Similarity=-0.160 Sum_probs=18.6
Q ss_pred cCchhHHHHhhhhhhcccc-EEEech
Q 024544 52 SSPHLVRKVHLDYLDAGAN-IIITAS 76 (266)
Q Consensus 52 ~~Pe~V~~iH~~Yl~AGAd-iI~TnT 76 (266)
..++...+.-+...++|+| .|..|-
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~ 128 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNL 128 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEES
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEec
Confidence 4566666667777788999 888873
No 210
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=42.07 E-value=91 Score=27.51 Aligned_cols=49 Identities=14% Similarity=0.033 Sum_probs=31.8
Q ss_pred HHHHHHHhhhhhHHhhhcCCCeEEeeccchh------------------hhHHHHHHHHhhcCcccccceeee
Q 024544 163 LETLKEFHRRRVLILANSGADLIAFETIPNK------------------LEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 163 ~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~------------------~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.+...++|++++ +.|+.+++.|.+.-- ...+.+.+++.+.+ .|+++.+.
T Consensus 38 ~~~~~~~y~~rA----~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~g--~~i~~QL~ 104 (338)
T 1z41_A 38 TPFHMAHYISRA----IGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQG--SKIGIQLA 104 (338)
T ss_dssp CHHHHHHHHHHH----HTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred CHHHHHHHHHHH----cCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhcC--CEEEEEec
Confidence 466788887765 378999999964211 12445566667655 57777774
No 211
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=42.05 E-value=44 Score=29.88 Aligned_cols=49 Identities=12% Similarity=-0.106 Sum_probs=33.0
Q ss_pred hhhHHhhhcCCCeEEeeccchh---hhHHHHHHHHhhcCcccccceeeecCCCc
Q 024544 172 RRVLILANSGADLIAFETIPNK---LEAKAYAELLEEEGITIPAWFSFNSKDGI 222 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~---~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~ 222 (266)
..++++++.|++.|++|++..- .++..+++.+.+. ++||+++-.|..+.
T Consensus 233 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~--Gi~VV~~Sr~~~G~ 284 (332)
T 2wlt_A 233 DLFQASLNSHAKGVVIAGVGNGNVSAGFLKAMQEASQM--GVVIVRSSRVGSGG 284 (332)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSSSC
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CCEEEEECCCCCCC
Confidence 4567788889999999988652 3444444433333 48999888876543
No 212
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=41.90 E-value=27 Score=33.65 Aligned_cols=46 Identities=13% Similarity=0.286 Sum_probs=31.2
Q ss_pred hhhhhHHhhhcCCCeEEeeccchh-hhHHHHHHHHhhcCccccccee
Q 024544 170 HRRRVLILANSGADLIAFETIPNK-LEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~-~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
..+++++|+++|||+|.+.|-.-- .-+...++.+|+..+++|++..
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaG 328 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAG 328 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEec
Confidence 345789999999999999875433 3334555666665456776643
No 213
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=41.68 E-value=75 Score=27.21 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=25.6
Q ss_pred hhHHHHHHHhhhhhHHhhh-cCCCeEEee--ccc
Q 024544 161 VSLETLKEFHRRRVLILAN-SGADLIAFE--TIP 191 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~-~gvD~i~~E--T~~ 191 (266)
.+.+++.++-.+.++.|.+ .|+|+|++= |.+
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas 78 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTAT 78 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhh
Confidence 4678888888888999998 999999884 555
No 214
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=41.47 E-value=21 Score=31.07 Aligned_cols=19 Identities=21% Similarity=0.396 Sum_probs=15.2
Q ss_pred hhhhhHHhhhcCCCeEEee
Q 024544 170 HRRRVLILANSGADLIAFE 188 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~E 188 (266)
..+.++.|.++|+|+|=+-
T Consensus 34 ~~~~~~~l~~~GaD~iElg 52 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELG 52 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEC
Confidence 3446788999999999776
No 215
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=41.32 E-value=1.5e+02 Score=24.47 Aligned_cols=140 Identities=14% Similarity=0.002 Sum_probs=72.0
Q ss_pred chhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccccc
Q 024544 54 PHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRP 133 (266)
Q Consensus 54 Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (266)
++.+.++-+..-+.|-.+...++|..++. .+ ..++..+..++++++|++. +.+
T Consensus 47 ~~~~~~~~~~l~~~gl~~~~~~~~~~~~~----~~-~~~~~~~~~~~~i~~A~~l----------------------G~~ 99 (286)
T 3dx5_A 47 YETTERELNCLKDKTLEITMISDYLDISL----SA-DFEKTIEKCEQLAILANWF----------------------KTN 99 (286)
T ss_dssp HHHHHHHHHHTGGGTCCEEEEECCCCCST----TS-CHHHHHHHHHHHHHHHHHH----------------------TCC
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCCCC----ch-hHHHHHHHHHHHHHHHHHh----------------------CCC
Confidence 35556665555677888777665532111 01 1234455667777777765 222
Q ss_pred eEEEEecccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeeccc-----hhhhHHHHHHHHhhcCc
Q 024544 134 VLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIP-----NKLEAKAYAELLEEEGI 208 (266)
Q Consensus 134 ~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~-----~~~E~~a~~~a~~~~~~ 208 (266)
.++. ..|..+. + .......+.+.+..++.++...+.||. |.+|+.+ +..++.. .+++.+
T Consensus 100 ~v~~-~~g~~~~---------~-~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~~---l~~~~~- 163 (286)
T 3dx5_A 100 KIRT-FAGQKGS---------A-DFSQQERQEYVNRIRMICELFAQHNMY-VLLETHPNTLTDTLPSTLE---LLGEVD- 163 (286)
T ss_dssp EEEE-CSCSSCG---------G-GSCHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSTTSSHHHHHH---HHHHHC-
T ss_pred EEEE-cCCCCCc---------c-cCcHHHHHHHHHHHHHHHHHHHHhCCE-EEEecCCCcCcCCHHHHHH---HHHhcC-
Confidence 3322 2232211 0 111224456666677666777778995 5669885 3445444 444433
Q ss_pred ccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 209 TIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 209 ~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
-| .+.++++..-....|.++.+.+..+.
T Consensus 164 -~~-~vg~~~D~~h~~~~g~d~~~~l~~~~ 191 (286)
T 3dx5_A 164 -HP-NLKINLDFLHIWESGADPVDSFQQLR 191 (286)
T ss_dssp -CT-TEEEEEEHHHHHHTTCCHHHHHHHHG
T ss_pred -CC-CeEEEeccccHhhcCCCHHHHHHHHH
Confidence 22 23444432222345777777766553
No 216
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=41.32 E-value=20 Score=31.25 Aligned_cols=56 Identities=18% Similarity=0.276 Sum_probs=35.8
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeE-----EeeccchhhhHHHHHHHHhhcCcccccceeeecCCC
Q 024544 162 SLETLKEFHRRRVLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG 221 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i-----~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~ 221 (266)
+.+++.. +++.+.+.|+|++ +++.....+++...+..+|+.-.++|+++++....+
T Consensus 50 ~~~e~~~----~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~e 110 (276)
T 3o1n_A 50 TITDVKS----EALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKE 110 (276)
T ss_dssp SHHHHHH----HHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGG
T ss_pred CHHHHHH----HHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhh
Confidence 4455444 3455555778877 445555556777777777765336999999976543
No 217
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=40.78 E-value=1.8e+02 Score=25.32 Aligned_cols=45 Identities=9% Similarity=0.097 Sum_probs=25.2
Q ss_pred CchhHHHHhhhhhhccccEEE-echhhhhhhhhhccCCCHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVE 103 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~-TnTy~a~~~~l~~~g~~~~~~~~l~~~av~ 103 (266)
+.+.+++.-+-++++|++-|. .-|-+=. . -++.+|-.++++.+++
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~-----~Ls~~Er~~v~~~~~~ 71 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTTAES-P-----TLTHDEELELFAAVQK 71 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTTTTG-G-----GSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-h-----hCCHHHHHHHHHHHHH
Confidence 345677777777899999444 3343211 1 2444555555555444
No 218
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=40.72 E-value=27 Score=30.82 Aligned_cols=61 Identities=11% Similarity=0.064 Sum_probs=36.2
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccccc
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC 250 (266)
++..+++|+|+|.+-+++ +++++.+++.++. +.|+.+|- |-+++.+..++. .+++.|++-.
T Consensus 221 ~~eA~~aGaD~I~ld~~~-~e~l~~~v~~~~~---~~~I~ASG----------GIt~~~i~~~a~--~GvD~isvGs 281 (296)
T 1qap_A 221 LDDALKAGADIIMLDNFN-TDQMREAVKRVNG---QARLEVSG----------NVTAETLREFAE--TGVDFISVGA 281 (296)
T ss_dssp HHHHHHTTCSEEEESSCC-HHHHHHHHHTTCT---TCCEEECC----------CSCHHHHHHHHH--TTCSEEECSH
T ss_pred HHHHHHcCCCEEEECCCC-HHHHHHHHHHhCC---CCeEEEEC----------CCCHHHHHHHHH--cCCCEEEEeH
Confidence 333456789999998864 5677766664431 34544433 455655554444 4677777644
No 219
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=40.55 E-value=64 Score=29.49 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=30.2
Q ss_pred hhhhHHhhhcCCCeEEeeccc-----------hhhhHHHHHHHHhhcCcccccceee
Q 024544 171 RRRVLILANSGADLIAFETIP-----------NKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~~-----------~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.+.++.+.++|+|++-+-++- ..+..+.+.++.++.| +|++.++
T Consensus 159 ~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G--l~~~te~ 213 (385)
T 3nvt_A 159 AAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG--LGVISEI 213 (385)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEEC
T ss_pred HHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC--CEEEEec
Confidence 346778888999999887742 2456666666667665 6766544
No 220
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=40.35 E-value=65 Score=28.87 Aligned_cols=74 Identities=11% Similarity=0.075 Sum_probs=46.0
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----e-ccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----E-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----E-T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~ 234 (266)
+|++.+ +.+++.+++.|||.|++ | ..-+.+|-+.+++. ...+ ++||++... +.+..+++
T Consensus 44 ID~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~g-rvpViaGvg---------~~st~eai 108 (344)
T 2hmc_A 44 PDFDAL----VRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKA-GIPVIVGTG---------AVNTASAV 108 (344)
T ss_dssp BCHHHH----HHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHT-TCCEEEECC---------CSSHHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCC-CCcEEEecC---------CCCHHHHH
Confidence 666554 44678888899999875 3 12235566777776 3223 689987762 34566777
Q ss_pred hHHhhh--hhhhhcccc
Q 024544 235 SIADSC--EQVVAVGIN 249 (266)
Q Consensus 235 ~~~~~~--~~~~avGiN 249 (266)
+..+.. .+++++.+-
T Consensus 109 ~la~~A~~~Gadavlv~ 125 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVI 125 (344)
T ss_dssp HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhcCCCEEEEC
Confidence 665432 466666554
No 221
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=40.26 E-value=1.7e+02 Score=26.16 Aligned_cols=72 Identities=17% Similarity=0.178 Sum_probs=38.3
Q ss_pred hHHHHHHHhhhhhHHhhhcC--CCeEEeeccch-------hhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHH
Q 024544 162 SLETLKEFHRRRVLILANSG--ADLIAFETIPN-------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILE 232 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~g--vD~i~~ET~~~-------~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~ 232 (266)
..+.+.+..++..+...+.| |. |.+|+++. +.....+.+.+++.+ -|-.+.++++..-....|.++.+
T Consensus 153 ~~~~~~e~L~~l~~~A~~~G~~v~-l~lE~~~~e~~~~~~~~t~~~~~~li~~v~--~pn~vgl~lD~~H~~~~g~d~~~ 229 (394)
T 1xla_A 153 ALDRMREGVDTAAGYIKDKGYNLR-IALEPKPNEPRGDIFLPTVGHGLAFIEQLE--HGDIVGLNPETGHEQMAGLNFTH 229 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCE-EEECCCSSSSSSEESSCSHHHHHHHHTTCT--TGGGEEECCBHHHHHTTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeE-EEEecCCCCCCccccCCCHHHHHHHHHHhC--CCCceEEEEecCcccccCCCHHH
Confidence 34455566666666666678 65 66799852 234445555566544 34224444432222345666665
Q ss_pred hhhH
Q 024544 233 CASI 236 (266)
Q Consensus 233 a~~~ 236 (266)
.+..
T Consensus 230 ~i~~ 233 (394)
T 1xla_A 230 GIAQ 233 (394)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 222
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=39.96 E-value=40 Score=29.72 Aligned_cols=76 Identities=9% Similarity=-0.037 Sum_probs=46.7
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEE-eeccc-----hhhhHHHHHHHHhhc-CcccccceeeecCCCceeecCchHHHh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIA-FETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~-~ET~~-----~~~E~~a~~~a~~~~-~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
++.+. ++.+++.+++.|||.|+ +-|.. +.+|-+.+++.+.+. +.++||++... +.+..++
T Consensus 25 iD~~~----l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg---------~~~t~~a 91 (311)
T 3h5d_A 25 INFDA----IPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG---------TNDTRDS 91 (311)
T ss_dssp BCTTH----HHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC---------CSSHHHH
T ss_pred cCHHH----HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CcCHHHH
Confidence 55544 44467788889999765 34432 456777777766553 34689998762 3456677
Q ss_pred hhHHhhh--hhh-hhcccc
Q 024544 234 ASIADSC--EQV-VAVGIN 249 (266)
Q Consensus 234 ~~~~~~~--~~~-~avGiN 249 (266)
++..+.. .++ +++.+-
T Consensus 92 i~la~~A~~~Ga~davlv~ 110 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAI 110 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEc
Confidence 7666543 233 655553
No 223
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=39.56 E-value=2.1e+02 Score=28.05 Aligned_cols=66 Identities=6% Similarity=0.055 Sum_probs=37.2
Q ss_pred HhhhhhHHhhh---cCCC---eE-Eeeccc--hhhhHHHHHHHHhhcCcc-cccceeeecCCCceeecCchHHHhhhHHh
Q 024544 169 FHRRRVLILAN---SGAD---LI-AFETIP--NKLEAKAYAELLEEEGIT-IPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 169 ~~~~qi~~l~~---~gvD---~i-~~ET~~--~~~E~~a~~~a~~~~~~~-~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
|..+.++.+.+ .|+| .| +--|+. ...++...++.+++.-+. -.+.+++-|.++ .|..+..++..+.
T Consensus 227 fl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND----~GlAvANslaAv~ 302 (644)
T 3hq1_A 227 YAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHND----RGTAVAAAELGFA 302 (644)
T ss_dssp HHHHHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEEecCCC----CCcHHHHHHHHHH
Confidence 34444555554 4788 33 334543 344666667777653111 137789988876 4666666655544
No 224
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=39.28 E-value=36 Score=30.97 Aligned_cols=65 Identities=8% Similarity=-0.034 Sum_probs=38.9
Q ss_pred hhhHHhhhcCCCeEEeec-cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccc
Q 024544 172 RRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGi 248 (266)
++++.+.++|+|++.+-+ ..+......+++.+++.-+++|+++. .+.+.+++. .+.+ .++++|.+
T Consensus 156 ~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~----------~v~~~~~a~-~a~~-~Gad~I~v 221 (404)
T 1eep_A 156 ERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAG----------NIVTKEAAL-DLIS-VGADCLKV 221 (404)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEE----------EECSHHHHH-HHHT-TTCSEEEE
T ss_pred HHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEc----------CCCcHHHHH-HHHh-cCCCEEEE
Confidence 456667789999998743 33444566667777764225888861 223444443 3333 46777766
No 225
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=39.02 E-value=68 Score=33.64 Aligned_cols=64 Identities=17% Similarity=0.186 Sum_probs=45.6
Q ss_pred HHhhhhhHHhhhcCCCeEEee-cc--chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 168 ~~~~~qi~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+||.+.++.+.+.|+|.|.+= |. ....++..+++++++.- .+-+++-+.++ .|..+..++..+.
T Consensus 692 ~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~---~~~i~~H~Hnt----~G~a~An~laA~~ 758 (1150)
T 3hbl_A 692 EYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV---DLPIHLHTHDT----SGNGLLTYKQAID 758 (1150)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC---CSCEEEEECBT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc---CCeEEEEeCCC----CcHHHHHHHHHHH
Confidence 577778888999999999774 33 45678888888888742 34567777665 5777776666555
No 226
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=38.51 E-value=30 Score=29.73 Aligned_cols=54 Identities=20% Similarity=0.187 Sum_probs=33.1
Q ss_pred hHHhhhcCCCeE-----EeeccchhhhHHHHHHHHhhcCcccccceeeecCCC-ceeecC
Q 024544 174 VLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-INVVSG 227 (266)
Q Consensus 174 i~~l~~~gvD~i-----~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~-~~l~~G 227 (266)
++.+.+.|+|++ +++..++..++...+..+++.-.++|+++++....+ |...++
T Consensus 38 ~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~ 97 (257)
T 2yr1_A 38 AEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPL 97 (257)
T ss_dssp HHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSS
T ss_pred HHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCC
Confidence 333444566665 356666677777777777764226899999976544 443244
No 227
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=38.28 E-value=33 Score=29.89 Aligned_cols=25 Identities=24% Similarity=0.216 Sum_probs=17.9
Q ss_pred hhHHHHhhhhhhccccEEEechhhh
Q 024544 55 HLVRKVHLDYLDAGANIIITASYQA 79 (266)
Q Consensus 55 e~V~~iH~~Yl~AGAdiI~TnTy~a 79 (266)
+...++-+.-.++|.+.|+.-+|..
T Consensus 27 e~k~~i~~~L~~~Gv~~IE~g~~~~ 51 (298)
T 2cw6_A 27 PVKIKLIDMLSEAGLSVIETTSFVS 51 (298)
T ss_dssp HHHHHHHHHHHHTTCSEECCEECCC
T ss_pred HHHHHHHHHHHHcCcCEEEECCCcC
Confidence 3334666677889999999977643
No 228
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=38.20 E-value=43 Score=30.55 Aligned_cols=71 Identities=11% Similarity=0.039 Sum_probs=42.0
Q ss_pred hhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCC---------c--eeecCchHHHhhhHHh---hhhh
Q 024544 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG---------I--NVVSGDSILECASIAD---SCEQ 242 (266)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~---------~--~l~~G~~~~~a~~~~~---~~~~ 242 (266)
+++.|++.+ |+.+..|++.+-+++++.+...+|++-+....+ | ..+.|-+.+++...+. +..+
T Consensus 120 a~~~gv~~i---~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~~~~~~~~ 196 (425)
T 2qgh_A 120 ALKLNILFL---NVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAF 196 (425)
T ss_dssp HHHTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHHHCSS
T ss_pred HHHCCCCEE---EeCCHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHHhCCC
Confidence 345677756 445677777777766665545678877765321 1 2456877766655443 3235
Q ss_pred hhhccccc
Q 024544 243 VVAVGINC 250 (266)
Q Consensus 243 ~~avGiNC 250 (266)
+...|+-|
T Consensus 197 l~l~Gl~~ 204 (425)
T 2qgh_A 197 LEPVSVHF 204 (425)
T ss_dssp EEEEEEEC
T ss_pred ccEEEEEE
Confidence 55567655
No 229
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=37.98 E-value=31 Score=33.17 Aligned_cols=85 Identities=12% Similarity=0.116 Sum_probs=50.5
Q ss_pred hHHhhhcCCCeEE-eeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhh--hhhhhcccc-
Q 024544 174 VLILANSGADLIA-FETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC--EQVVAVGIN- 249 (266)
Q Consensus 174 i~~l~~~gvD~i~-~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~--~~~~avGiN- 249 (266)
++.+.++|+|.|- |-..+++..++.+++++++.+ ..+-.++++.+.. ..+++.++..++.. .+++.|.+-
T Consensus 123 ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G--~~v~~~i~~~~~~----~~~~e~~~~~a~~l~~~Gad~I~L~D 196 (539)
T 1rqb_A 123 VDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAG--KHAQGTICYTISP----VHTVEGYVKLAGQLLDMGADSIALKD 196 (539)
T ss_dssp HHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTT--CEEEEEEECCCST----TCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCC--CeEEEEEEeeeCC----CCCHHHHHHHHHHHHHcCCCEEEeCC
Confidence 5667788999885 446667778888888888876 4554445443321 23455444444321 355555442
Q ss_pred ---cCCcchhhhhheeee
Q 024544 250 ---CTSPRFIHGLILSVR 264 (266)
Q Consensus 250 ---C~~p~~~~~~l~~l~ 264 (266)
+..|..+..+++.++
T Consensus 197 T~G~~~P~~v~~lv~~l~ 214 (539)
T 1rqb_A 197 MAALLKPQPAYDIIKAIK 214 (539)
T ss_dssp TTCCCCHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHH
Confidence 234777777776554
No 230
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=37.80 E-value=44 Score=28.93 Aligned_cols=49 Identities=6% Similarity=-0.120 Sum_probs=33.2
Q ss_pred HhhhhhHHhhhcCCC-eEEeec-----------cchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 169 FHRRRVLILANSGAD-LIAFET-----------IPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD-~i~~ET-----------~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
.|.+.++.+.++|+| .|-+-- ..+.+.+..+++++++.- ++|+++-++.
T Consensus 107 ~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~ 167 (311)
T 1jub_A 107 ENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLPP 167 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECC
T ss_pred HHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc-CCCEEEEECC
Confidence 355567778888999 776631 125566677888888753 5899887653
No 231
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=37.76 E-value=47 Score=31.23 Aligned_cols=43 Identities=23% Similarity=0.252 Sum_probs=28.3
Q ss_pred hHHhhhcCCCeEEee----c-----------cchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 174 VLILANSGADLIAFE----T-----------IPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 174 i~~l~~~gvD~i~~E----T-----------~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
++.+.++|+|+|.+- + .|.+.-+..+.+++++. ++|++.+.-+
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~--~iPVIa~GGI 341 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGT--GVPLIADGGI 341 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTT--TCCEEEESCC
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccC--CCcEEEeCCC
Confidence 466778999999872 1 45555555666666554 4899876533
No 232
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=37.40 E-value=2.3e+02 Score=26.10 Aligned_cols=54 Identities=13% Similarity=0.107 Sum_probs=35.4
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEeeccchhh----------hHHHHHHHHhhcCccccccee
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKL----------EAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~----------E~~a~~~a~~~~~~~~Pv~iS 215 (266)
...+...++.++.++.+.+. .+.+++|.+..+. -.+.++.++|+.+++.|+++.
T Consensus 102 ~~~~~~~~~w~~iA~ryk~~-~~~Vi~eL~NEP~~~~~~~~w~~~~~~~i~aIR~~dp~~~I~v~ 165 (464)
T 1wky_A 102 ASLNRAVDYWIEMRSALIGK-EDTVIINIANEWFGSWDGAAWADGYKQAIPRLRNAGLNNTLMID 165 (464)
T ss_dssp HHHHHHHHHHHHTGGGTTTC-TTTEEEECCTTCCCSSCHHHHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCC-CCeEEEEeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEc
Confidence 35667777887777777653 3566788776432 234567778887666677665
No 233
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=37.35 E-value=1.4e+02 Score=26.85 Aligned_cols=18 Identities=11% Similarity=-0.162 Sum_probs=13.7
Q ss_pred hhhhhHHhhhcCCCeEEe
Q 024544 170 HRRRVLILANSGADLIAF 187 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ 187 (266)
+...++.|.+.|+|+|-+
T Consensus 258 ~~~la~~le~~Gvd~i~v 275 (376)
T 1icp_A 258 GLYMVESLNKYDLAYCHV 275 (376)
T ss_dssp HHHHHHHHGGGCCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 344577888899999965
No 234
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=37.12 E-value=42 Score=30.32 Aligned_cols=43 Identities=16% Similarity=0.260 Sum_probs=28.9
Q ss_pred hhhhHHhhhcCCCeEEeeccc-hhhhHHHHHHHHhhcCcccccce
Q 024544 171 RRRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~~-~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
.++++.++++|||+|.+.+-. +.......++.+++.. ++|+++
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~-~~~Viv 150 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIV 150 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC-CCEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc-CCcEEE
Confidence 346788889999999886543 3344455566666542 588887
No 235
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=37.07 E-value=47 Score=29.77 Aligned_cols=47 Identities=15% Similarity=0.093 Sum_probs=35.9
Q ss_pred HHhhhhhHHhhhcCC--CeEEeec------cchhhhHHHHHHHHhhcCcccccceee
Q 024544 168 EFHRRRVLILANSGA--DLIAFET------IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 168 ~~~~~qi~~l~~~gv--D~i~~ET------~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+.+...++.|.+.|| |.|-+.. .|+..+++..++.+...+ +||+||=
T Consensus 191 ~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~p~~~~~~~~l~~~a~lG--l~v~iTE 245 (335)
T 4f8x_A 191 TAVLQLVSNLRKRGIRIDGVGLESHFIVGETPSLADQLATKQAYIKAN--LDVAVTE 245 (335)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEETTCCCCHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceeeeeeeecCCCCCCHHHHHHHHHHHHHcC--CeeEEee
Confidence 455667888887775 8886652 577889999999888876 8999874
No 236
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=36.91 E-value=45 Score=27.47 Aligned_cols=24 Identities=21% Similarity=0.069 Sum_probs=20.0
Q ss_pred cCch--hHHHHhhhhhhccccEEEec
Q 024544 52 SSPH--LVRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 52 ~~Pe--~V~~iH~~Yl~AGAdiI~Tn 75 (266)
..|+ .+.++=+.|.++|++.|..+
T Consensus 31 ~~~~~~~~~~~a~~~~~~G~~~i~~~ 56 (234)
T 1yxy_A 31 YSETGGIMPLMAKAAQEAGAVGIRAN 56 (234)
T ss_dssp CCTTCCSHHHHHHHHHHHTCSEEEEE
T ss_pred cCCccchHHHHHHHHHHCCCcEeecC
Confidence 4577 78888899999999998765
No 237
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=36.90 E-value=70 Score=28.11 Aligned_cols=77 Identities=13% Similarity=0.052 Sum_probs=47.4
Q ss_pred hHHhhhcCC-CeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhcccccCC
Q 024544 174 VLILANSGA-DLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (266)
Q Consensus 174 i~~l~~~gv-D~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC~~ 252 (266)
+.+..++|. +++..+. .+.+++...++.+++.. +.|+.+.+.+.+ ..+.+.+..+.. .++++|-+++..
T Consensus 29 a~av~~aG~lG~i~~~~-~~~~~~~~~i~~i~~~~-~~p~gvnl~~~~-------~~~~~~~~~a~~-~g~d~V~~~~g~ 98 (332)
T 2z6i_A 29 AGAVSKAGGLGIIGGGN-APKEVVKANIDKIKSLT-DKPFGVNIMLLS-------PFVEDIVDLVIE-EGVKVVTTGAGN 98 (332)
T ss_dssp HHHHHHHTSBEEEECTT-CCHHHHHHHHHHHHHHC-CSCEEEEECTTS-------TTHHHHHHHHHH-TTCSEEEECSSC
T ss_pred HHHHHhCCCcEEeCCCC-CCHHHHHHHHHHHHHhc-CCCEEEEecCCC-------CCHHHHHHHHHH-CCCCEEEECCCC
Confidence 344555564 6665554 35677777777777643 478888776522 125566666655 578888888877
Q ss_pred cchhhhhh
Q 024544 253 PRFIHGLI 260 (266)
Q Consensus 253 p~~~~~~l 260 (266)
|..+...+
T Consensus 99 p~~~i~~l 106 (332)
T 2z6i_A 99 PSKYMERF 106 (332)
T ss_dssp GGGTHHHH
T ss_pred hHHHHHHH
Confidence 65444443
No 238
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=36.86 E-value=47 Score=29.62 Aligned_cols=49 Identities=14% Similarity=0.043 Sum_probs=32.9
Q ss_pred hhhHHhhhcCCCeEEeeccchh---hhHHHHHHHHhhcCcccccceeeecCCCc
Q 024544 172 RRVLILANSGADLIAFETIPNK---LEAKAYAELLEEEGITIPAWFSFNSKDGI 222 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~---~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~ 222 (266)
..++++++.|++.|++|++..- .++..+++.+.+. ++||+++-.|..+.
T Consensus 232 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~--Gi~VV~~Sr~~~G~ 283 (327)
T 1o7j_A 232 YLYDAAIQHGVKGIVYAGMGAGSVSVRGIAGMRKALEK--GVVVMRSTRTGNGI 283 (327)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSBSC
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CceEEEECCCCCCC
Confidence 4567778889999999998652 3444444433333 48999888776543
No 239
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=36.65 E-value=45 Score=29.01 Aligned_cols=35 Identities=23% Similarity=0.085 Sum_probs=25.1
Q ss_pred hhHHhhhcCCCeEEeec-cchhhhHHHHHHHHhhcC
Q 024544 173 RVLILANSGADLIAFET-IPNKLEAKAYAELLEEEG 207 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~ 207 (266)
|+......|+|.+++-+ .-+..+++..++.+++.+
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG 169 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALG 169 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC
Confidence 45556678999988774 444567788888887765
No 240
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=36.57 E-value=38 Score=29.29 Aligned_cols=44 Identities=16% Similarity=0.266 Sum_probs=31.5
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccce
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
+..+++.+++ |+|.|++=-+.+.+|++.+.++++..+.++++++
T Consensus 83 ~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~ 126 (284)
T 1sgj_A 83 FEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILA 126 (284)
T ss_dssp HHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEE
Confidence 4456777777 8999998888888888888888775422344444
No 241
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=36.42 E-value=48 Score=27.43 Aligned_cols=74 Identities=9% Similarity=0.040 Sum_probs=37.4
Q ss_pred hhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCc-----hHHHhhhHHhhhhhhhh
Q 024544 173 RVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD-----SILECASIADSCEQVVA 245 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~-----~~~~a~~~~~~~~~~~a 245 (266)
+++.+++.|+|.+.+-+ +++...+..+ ++..+ ..+.+++.+..+.-...|. +..+.+..+.+ .+++.
T Consensus 89 ~~~~~l~~Gad~V~lg~~~l~~p~~~~~~---~~~~g--~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~-~G~~~ 162 (244)
T 1vzw_A 89 TLAAALATGCTRVNLGTAALETPEWVAKV---IAEHG--DKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNK-EGCAR 162 (244)
T ss_dssp HHHHHHHTTCSEEEECHHHHHCHHHHHHH---HHHHG--GGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHH-TTCCC
T ss_pred HHHHHHHcCCCEEEECchHhhCHHHHHHH---HHHcC--CcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHh-CCCCE
Confidence 35566678999988753 4554434433 44433 2344555543211111221 44455555544 46677
Q ss_pred cccccCC
Q 024544 246 VGINCTS 252 (266)
Q Consensus 246 vGiNC~~ 252 (266)
|.++...
T Consensus 163 i~~~~~~ 169 (244)
T 1vzw_A 163 YVVTDIA 169 (244)
T ss_dssp EEEEEC-
T ss_pred EEEeccC
Confidence 7776643
No 242
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=36.26 E-value=43 Score=27.83 Aligned_cols=42 Identities=31% Similarity=0.387 Sum_probs=30.7
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+.++.+.++|+|.+.+-+++. .+.+.+++.+++.+ ..+++.+
T Consensus 99 ~~~~~~~~~Gad~v~~~~~~~-~~~~~~~~~~~~~g--~~~~~~i 140 (248)
T 1geq_A 99 NFLAEAKASGVDGILVVDLPV-FHAKEFTEIAREEG--IKTVFLA 140 (248)
T ss_dssp HHHHHHHHHTCCEEEETTCCG-GGHHHHHHHHHHHT--CEEEEEE
T ss_pred HHHHHHHHCCCCEEEECCCCh-hhHHHHHHHHHHhC--CCeEEEE
Confidence 356778889999999988875 57777888888765 4444444
No 243
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=36.07 E-value=35 Score=31.54 Aligned_cols=55 Identities=18% Similarity=0.266 Sum_probs=40.0
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccc-------hhhhHHHHHHHHhhcCcccccceeeec
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIP-------NKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~-------~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
+..+.+++|...++.|.+-|||+|=+--.. ...+.++..+++++++ -|+++|++.
T Consensus 158 ~~p~~~~~~~~~~~~l~~~GvDyvK~D~~~~~~~~~~~~~~~~~~~~aL~~~g--r~i~~slc~ 219 (433)
T 3cc1_A 158 TKEGAQSYYNSLFELYAQWGVDFVKVDDIAASRLYDTHLEEIKMIQRAIQACG--RPMVLSLSP 219 (433)
T ss_dssp TSTTHHHHHHHHHHHHHHTTCCEEEEESCSCTTSSCCCHHHHHHHHHHHHHSS--SCCEEECCC
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEeCCcccccCCcccHHHHHHHHHHHHhcC--CCEEEEecC
Confidence 445678888888899999999998554322 2456677788888866 688887753
No 244
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=35.81 E-value=58 Score=28.60 Aligned_cols=78 Identities=18% Similarity=0.158 Sum_probs=42.1
Q ss_pred HHhhhcCCCeEEeeccchh---------------------------hhHHHHHHHHhhcCcccccceeeecCCCceeec-
Q 024544 175 LILANSGADLIAFETIPNK---------------------------LEAKAYAELLEEEGITIPAWFSFNSKDGINVVS- 226 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET~~~~---------------------------~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~- 226 (266)
+.+.+.|+.++..||++-- ...+..++.+++.+.+.|+.+++.-..+.....
T Consensus 72 ~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~ 151 (336)
T 1f76_A 72 DALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQG 151 (336)
T ss_dssp HHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCCCSEEEEEECCCTTSCGGGT
T ss_pred HHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhcccCCcEEEEecCCCCCccccc
Confidence 4456788999888887522 123445555555433468888885322111000
Q ss_pred CchHHHhhhHHhhhhhhhhcccccCCcc
Q 024544 227 GDSILECASIADSCEQVVAVGINCTSPR 254 (266)
Q Consensus 227 G~~~~~a~~~~~~~~~~~avGiNC~~p~ 254 (266)
=..+.+++..+. .++++|-+|+++|.
T Consensus 152 ~~~~~~aa~~~~--~g~d~iein~~sP~ 177 (336)
T 1f76_A 152 KDDYLICMEKIY--AYAGYIAINISSPN 177 (336)
T ss_dssp HHHHHHHHHHHG--GGCSEEEEECCCSS
T ss_pred HHHHHHHHHHHh--ccCCEEEEEccCCC
Confidence 012223333332 26788889998764
No 245
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=35.70 E-value=83 Score=27.42 Aligned_cols=62 Identities=19% Similarity=0.201 Sum_probs=41.3
Q ss_pred ceEEEEecccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeecc---ch------hhhHHHHHHHH
Q 024544 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI---PN------KLEAKAYAELL 203 (266)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~---~~------~~E~~a~~~a~ 203 (266)
+.+|.|=|-++++.+.||..| .+.+++.+ +++.+++.|+|+|=+-.- |. .+|.+.++.++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTH-------NSLIDAVK----HANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCC-------THHHHHHH----HHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccccc-------CCHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 457889899998887776432 24555544 567778899999955532 33 67777666555
Q ss_pred hh
Q 024544 204 EE 205 (266)
Q Consensus 204 ~~ 205 (266)
+.
T Consensus 83 ~~ 84 (282)
T 1aj0_A 83 EA 84 (282)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 246
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=35.65 E-value=1e+02 Score=26.44 Aligned_cols=65 Identities=9% Similarity=0.041 Sum_probs=33.1
Q ss_pred HHHHHHHhhhhhHHhhhcCCCeEEeeccch-----hhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHH
Q 024544 163 LETLKEFHRRRVLILANSGADLIAFETIPN-----KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSIL 231 (266)
Q Consensus 163 ~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~-----~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~ 231 (266)
.+.+.+..++.++...+.||. |.+|+++. +.....+.+.+++.+ -| .+.++++..-....|.++.
T Consensus 159 ~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~t~~~~~~ll~~v~--~~-~vgl~~D~~H~~~~g~d~~ 228 (335)
T 2qw5_A 159 YANAQPILDKLGEYAEIKKVK-LAIEPITHWETPGPNKLSQLIEFLKGVK--SK-QVGVVIDSAHEILDGEGPE 228 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTCE-EEECCCCTTTCSSCCSHHHHHHHHTTCC--CT-TEEEEEEHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEeeCCcccccccCCHHHHHHHHHhcC--CC-CeeEEEecccchhccCChH
Confidence 344555556556666667987 56698752 223444555555543 22 2344443222223455555
No 247
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=35.39 E-value=1.8e+02 Score=23.64 Aligned_cols=41 Identities=15% Similarity=0.045 Sum_probs=25.2
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccch-------hhhHHHHHHHH
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIPN-------KLEAKAYAELL 203 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~-------~~E~~a~~~a~ 203 (266)
..+.+.+..++..+...+.||. |.+|+.+. ..++..+++.+
T Consensus 117 ~~~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~l~~~~ 164 (278)
T 1i60_A 117 IKKSSVDVLTELSDIAEPYGVK-IALEFVGHPQCTVNTFEQAYEIVNTV 164 (278)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCE-EEEECCCCTTBSSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCE-EEEEecCCccchhcCHHHHHHHHHHh
Confidence 4455666666666666677985 56698763 45555544443
No 248
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=35.24 E-value=27 Score=33.56 Aligned_cols=31 Identities=29% Similarity=0.235 Sum_probs=26.8
Q ss_pred cCCCeEEeecc-chhhhHHHHHHHHhhcCccc
Q 024544 180 SGADLIAFETI-PNKLEAKAYAELLEEEGITI 210 (266)
Q Consensus 180 ~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~ 210 (266)
..+|+||.||= |++.+++...+.+++.-|++
T Consensus 387 p~aDliW~Et~~P~~~~a~~fa~~i~~~~P~~ 418 (538)
T 1dqu_A 387 PFADLIWMESKLPDYKQAKEFADGVHAVWPEQ 418 (538)
T ss_dssp TSCSEEECCCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred cccceEEeccCCCCHHHHHHHHHHHHHhCCCc
Confidence 57899999997 99999999999999865444
No 249
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=35.14 E-value=1.8e+02 Score=23.67 Aligned_cols=70 Identities=13% Similarity=0.017 Sum_probs=38.3
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccch--------hhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHh
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIPN--------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~--------~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
..+.+.+..++.++...+.||. |.+|+++. +.....+.+.+++.+ + .+.++++ -+++..+.++.+.
T Consensus 117 ~~~~~~~~l~~l~~~a~~~gv~-l~lE~~~~~~~~~~~~~~~~~~~~~l~~~~~---~-~vg~~~D-~~h~~~~~d~~~~ 190 (275)
T 3qc0_A 117 ARRMVVEGIAAVLPHARAAGVP-LAIEPLHPMYAADRACVNTLGQALDICETLG---P-GVGVAID-VYHVWWDPDLANQ 190 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCC-EEECCCCGGGTTTTBSCCCHHHHHHHHHHHC---T-TEEEEEE-HHHHTTCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCE-EEEeECCCcccCCccccCCHHHHHHHHHHhC---c-ccEEEEE-hhhheeCCCHHHH
Confidence 4555666676666666778996 55698642 223344555555544 2 4445443 2333335555556
Q ss_pred hhHH
Q 024544 234 ASIA 237 (266)
Q Consensus 234 ~~~~ 237 (266)
+..+
T Consensus 191 l~~~ 194 (275)
T 3qc0_A 191 IARA 194 (275)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 5544
No 250
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=34.99 E-value=2.9e+02 Score=27.61 Aligned_cols=118 Identities=16% Similarity=0.098 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCccccceEEEEecccccc---------eecCCCccccCC-CCchhHHHHHHH
Q 024544 100 RSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGA---------YLADGSEYSGDY-GDAVSLETLKEF 169 (266)
Q Consensus 100 ~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~---------~l~~gseY~g~y-~~~~~~~e~~~~ 169 (266)
.+++..|+..+.+.++. ..++..|.+++|+-+- .+.++ .|.-.+ +...+.++
T Consensus 585 ~~fe~lr~~~~~~~~~~-------------g~r~kVvlatvg~D~HdiG~~iVa~~l~~~-GfeVi~lG~~v~~ee---- 646 (762)
T 2xij_A 585 KEITSAIKRVHKFMERE-------------GRRPRLLVAKMGQDGHDRGAKVIATGFADL-GFDVDIGPLFQTPRE---- 646 (762)
T ss_dssp HHHHHHHHHHHHHHHHH-------------SSCCEEEEECCSSCCCCHHHHHHHHHHHHT-TCEEEECCTTCCHHH----
T ss_pred HHHHHHHHHHHHHHHhc-------------CCCCEEEEEecCcchhhHHHHHHHHHHHhC-CeEEeeCCCCCCHHH----
Confidence 56666777766664332 2346677889988431 11110 011111 11134444
Q ss_pred hhhhhHHhhhcCCCeEEeecc--chhhhHHHHHHHHhhcCc-ccccceeeecCC-----------CceeecCchHHHhhh
Q 024544 170 HRRRVLILANSGADLIAFETI--PNKLEAKAYAELLEEEGI-TIPAWFSFNSKD-----------GINVVSGDSILECAS 235 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~a~~~~~~-~~Pv~iSf~~~~-----------~~~l~~G~~~~~a~~ 235 (266)
.+++..+.++|++.+=.. .++..++.+++.+++.+. ++|+++.-.... ++....|+++.+++.
T Consensus 647 ---iv~aA~e~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivGG~~P~~d~~~l~~~GaD~~f~pgtd~~e~~~ 723 (762)
T 2xij_A 647 ---VAQQAVDADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGGVIPPQDYEFLFEVGVSNVFGPGTRIPKAAV 723 (762)
T ss_dssp ---HHHHHHHTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHHTCCEEECTTCCHHHHHH
T ss_pred ---HHHHHHHcCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCcccHHHHHhCCCCEEeCCCCCHHHHHH
Confidence 345566789999987653 467788999999998774 578888752221 122444677777766
Q ss_pred HHh
Q 024544 236 IAD 238 (266)
Q Consensus 236 ~~~ 238 (266)
.+.
T Consensus 724 ~i~ 726 (762)
T 2xij_A 724 QVL 726 (762)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 251
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=34.97 E-value=17 Score=31.64 Aligned_cols=27 Identities=30% Similarity=0.367 Sum_probs=24.3
Q ss_pred cccCchhHHHHhhhhhhccccEEEech
Q 024544 50 LVSSPHLVRKVHLDYLDAGANIIITAS 76 (266)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnT 76 (266)
+++++|+|++.-+-=++||||.|.|.|
T Consensus 145 ~L~d~e~i~~a~~ia~eaGADfVKTST 171 (260)
T 1p1x_A 145 ELKDEALIRKASEISIKAGADFIKTST 171 (260)
T ss_dssp HHCSHHHHHHHHHHHHHTTCSEEECCC
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeCC
Confidence 458889888888889999999999999
No 252
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=34.92 E-value=54 Score=28.00 Aligned_cols=31 Identities=16% Similarity=0.196 Sum_probs=25.6
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEee--ccc
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFE--TIP 191 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~E--T~~ 191 (266)
.+.+++.++-.+.++.|.+.|+|+|++= |.+
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas 77 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNTAT 77 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh
Confidence 4678888888888999999999999884 554
No 253
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=34.90 E-value=40 Score=29.62 Aligned_cols=47 Identities=15% Similarity=0.218 Sum_probs=32.5
Q ss_pred HhhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
.|.+.+..++++|..++ +|- -.+++|++.+++++++.+ +++++.+..
T Consensus 93 ~H~~~~~~al~aGkhVl-~EKP~a~~~~e~~~l~~~a~~~g--~~~~v~~~~ 141 (330)
T 4ew6_A 93 YRYEAAYKALVAGKHVF-LEKPPGATLSEVADLEALANKQG--ASLFASWHS 141 (330)
T ss_dssp HHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT--CCEEECCGG
T ss_pred HHHHHHHHHHHcCCcEE-EeCCCCCCHHHHHHHHHHHHhcC--CeEEEEehh
Confidence 56677777777887666 574 457788888888887765 566665543
No 254
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=34.66 E-value=55 Score=28.74 Aligned_cols=74 Identities=15% Similarity=0.066 Sum_probs=45.4
Q ss_pred hhhHHhhhcCCCeEE--eeccc-----------hhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 172 RRVLILANSGADLIA--FETIP-----------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~--~ET~~-----------~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
+.++.|.++|+|.+. +||.. +.++...+++.+++.+ +++...+.+. .|++.++.+..+.
T Consensus 153 e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~G--i~v~~~~i~G------lget~e~~~~~l~ 224 (350)
T 3t7v_A 153 ATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQG--YCVEDGILTG------VGNDIESTILSLR 224 (350)
T ss_dssp HHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHT--CEEEEEEEES------SSCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcC--CeEccceEee------cCCCHHHHHHHHH
Confidence 346667788888764 67762 3455566667777766 5655555431 2677777666553
Q ss_pred h--hhhhhhcccccCCc
Q 024544 239 S--CEQVVAVGINCTSP 253 (266)
Q Consensus 239 ~--~~~~~avGiNC~~p 253 (266)
. ..++.-++++...|
T Consensus 225 ~l~~l~~~~v~~~~f~p 241 (350)
T 3t7v_A 225 GMSTNDPDMVRVMTFLP 241 (350)
T ss_dssp HHHHTCCSEEEEEECCC
T ss_pred HHHhCCCCEEEecceee
Confidence 2 14566688877644
No 255
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=34.66 E-value=45 Score=27.13 Aligned_cols=25 Identities=24% Similarity=0.284 Sum_probs=20.9
Q ss_pred ccCchhHHHHhhhhhhccccEEEec
Q 024544 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 51 l~~Pe~V~~iH~~Yl~AGAdiI~Tn 75 (266)
+.+++...++=+.|.++|++.|..+
T Consensus 19 ~~~~~~~~~~a~~~~~~Ga~~i~~~ 43 (223)
T 1y0e_A 19 LHSSFIMSKMALAAYEGGAVGIRAN 43 (223)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeeeccC
Confidence 4577888889999999999998664
No 256
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=34.59 E-value=39 Score=29.64 Aligned_cols=46 Identities=22% Similarity=0.327 Sum_probs=30.4
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+++...+++|.++|. | --.++.|++.+++++++.+ +++.+.+.
T Consensus 106 ~H~~~a~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g--~~l~vg~~ 153 (393)
T 4fb5_A 106 FHAEMAIAALEAGKHVWC-EKPMAPAYADAERMLATAERSG--KVAALGYN 153 (393)
T ss_dssp GHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHSS--SCEEECCG
T ss_pred HHHHHHHHHHhcCCeEEE-ccCCcccHHHHHHhhhhHHhcC--Cccccccc
Confidence 577777777778877554 7 3456778888888777754 44544443
No 257
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=34.53 E-value=2.3e+02 Score=24.61 Aligned_cols=76 Identities=16% Similarity=0.125 Sum_probs=39.9
Q ss_pred hhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCC------CceeecCchHH---HhhhHHh--hhhhhhh
Q 024544 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD------GINVVSGDSIL---ECASIAD--SCEQVVA 245 (266)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~------~~~l~~G~~~~---~a~~~~~--~~~~~~a 245 (266)
|.++|++.+-+|--. +....++++.+.+ +|++--+-+.+ ++...-|.+-+ ++++... +..++++
T Consensus 115 l~kaGa~aVklEdg~---~~~~~i~~l~~~G--Ipv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ 189 (275)
T 3vav_A 115 LMRAGAQMVKFEGGE---WLAETVRFLVERA--VPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQL 189 (275)
T ss_dssp HHHTTCSEEEEECCG---GGHHHHHHHHHTT--CCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHcCCCEEEECCch---hHHHHHHHHHHCC--CCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCE
Confidence 445699999999764 3344555566654 78774332211 12222354433 2332221 1257788
Q ss_pred cccccCCcchhh
Q 024544 246 VGINCTSPRFIH 257 (266)
Q Consensus 246 vGiNC~~p~~~~ 257 (266)
|=+-|.....+.
T Consensus 190 ivlE~vp~~~a~ 201 (275)
T 3vav_A 190 IVLEAVPTLVAA 201 (275)
T ss_dssp EEEESCCHHHHH
T ss_pred EEecCCCHHHHH
Confidence 888887543333
No 258
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=34.51 E-value=1.8e+02 Score=25.43 Aligned_cols=130 Identities=12% Similarity=0.089 Sum_probs=68.2
Q ss_pred CchhHHHHhhhhhhccccEEEechh-hhhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccc
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASY-QATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy-~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (266)
+|...++..+..-++|.+.|+..-- ..-...-....++. ...+.+.+.|+.|++
T Consensus 40 ~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~-~~l~~l~~~v~~a~~------------------------ 94 (345)
T 3ndz_A 40 NPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQ-TWMKRVEEIANYAFD------------------------ 94 (345)
T ss_dssp CCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCH-HHHHHHHHHHHHHHT------------------------
T ss_pred CCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCH-HHHHHHHHHHHHHHH------------------------
Confidence 4655566566666889999987642 21000000112332 223344444444433
Q ss_pred cceEEEEecccccceecCCCccccCCC-CchhHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhh---------------
Q 024544 132 RPVLVAASVGSYGAYLADGSEYSGDYG-DAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLE--------------- 195 (266)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~-~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E--------------- 195 (266)
..++|.-.+=-++.+..+ .+. .....+...++.+..++.+.+. .+.+++|++..+..
T Consensus 95 ~Gi~vildlH~~~~w~~~------~~~~~~~~~~~~~~~w~~iA~~y~~~-~~~v~~el~NEP~~~~~~~~W~~~~~~~~ 167 (345)
T 3ndz_A 95 NDMYVIINLHHENEWLKP------FYANEAQVKAQLTKVWTQIANNFKKY-GDHLIFETMNEPRPVGASLQWTGGSYENR 167 (345)
T ss_dssp TTCEEEECCCSCTTTCCC------STTTHHHHHHHHHHHHHHHHHHTTTC-CTTEEEESCSCCCCCSGGGTTSCCCHHHH
T ss_pred CCCEEEEecCCccccccc------cccchHHHHHHHHHHHHHHHHHHcCC-CCceEEEeccCCCCCCcccccCCCCchhH
Confidence 245566555443322111 111 1234566667777777777653 46889999987642
Q ss_pred ------HHHHHHHHhhcC---cccccce
Q 024544 196 ------AKAYAELLEEEG---ITIPAWF 214 (266)
Q Consensus 196 ------~~a~~~a~~~~~---~~~Pv~i 214 (266)
.+.+++++|+.+ ++.+++|
T Consensus 168 ~~l~~~~~~~i~aIR~~g~~np~~~Iiv 195 (345)
T 3ndz_A 168 EVVNRYNLTAVNAIRATGGNNATRYIMV 195 (345)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGGTSCEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEE
Confidence 356777888873 2345555
No 259
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=34.45 E-value=1.6e+02 Score=27.39 Aligned_cols=47 Identities=23% Similarity=0.297 Sum_probs=33.8
Q ss_pred CCeEEeecchhhhHhhh-C---CCCCCccccccccccCchhHHHHhhhhhh
Q 024544 20 GGYSVVDGGFATELERH-G---ADLNDPLWSAKCLVSSPHLVRKVHLDYLD 66 (266)
Q Consensus 20 ~~~lllDGg~gT~L~~~-g---~~~~~~lws~~~ll~~Pe~V~~iH~~Yl~ 66 (266)
+.|+|++-|-|.+|... | +|+...+|+...=-.+|++++.+.+..-+
T Consensus 48 ~~P~vi~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~ 98 (473)
T 4e3q_A 48 RGTVVVTHGEGPYIVDVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYER 98 (473)
T ss_dssp HCCEEEEEEETTEEEETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeeecCEEEeCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHh
Confidence 57899999999999865 3 35555667654444789998888765443
No 260
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=34.29 E-value=1e+02 Score=25.53 Aligned_cols=48 Identities=13% Similarity=0.132 Sum_probs=31.2
Q ss_pred hhhHHhhhcCCCeEEee-----ccchhhhHHHHHHHHhhcCcccccceeeecCC
Q 024544 172 RRVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~ 220 (266)
+.++.+.++|+|++-+- .+|++.....+++.+|+.. ++|+-+-|.+.+
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~-~~~~~vhlmv~d 73 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT-KKTLDVHLMIVE 73 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC-CSEEEEEEESSS
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc-CCcEEEEEEccC
Confidence 35677888899987443 2356666667777787753 467766565543
No 261
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=34.28 E-value=52 Score=30.47 Aligned_cols=37 Identities=16% Similarity=0.252 Sum_probs=24.5
Q ss_pred hcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 179 ~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
+.|++.+. +-+..|++.+.+++++.+...+|++-+..
T Consensus 130 ~~gv~~i~---vds~~el~~l~~~a~~~~~~~~v~lrvn~ 166 (467)
T 2o0t_A 130 KAGVGHIV---VDSMTEIERLDAIAGEAGIVQDVLVRLTV 166 (467)
T ss_dssp HHTCSEEE---ECSHHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred HCCCCEEE---ECCHHHHHHHHHHHHhhCCCCeEEEEEcC
Confidence 45787664 45677777777766655545678877765
No 262
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=33.93 E-value=53 Score=28.15 Aligned_cols=45 Identities=22% Similarity=0.233 Sum_probs=30.0
Q ss_pred hhhhhHHhhhcC-CCeEEeeccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 170 HRRRVLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 170 ~~~qi~~l~~~g-vD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
|.+.++..++.| ||++=+|-...- ..+.+++.+++.+ ..+++|+.
T Consensus 102 ~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~~--~kvI~S~H 147 (257)
T 2yr1_A 102 VRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEECS--VWLVVSRH 147 (257)
T ss_dssp HHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHTT--CEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhCC--CEEEEEec
Confidence 333445555566 999999965433 5666676666643 78999985
No 263
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=33.92 E-value=54 Score=30.44 Aligned_cols=79 Identities=13% Similarity=0.142 Sum_probs=53.8
Q ss_pred hhHHHHHHHhhhhhHHhh-hcCCCeEEee---ccchhhh-H---HHHHHHHhhc-----CcccccceeeecCCCceeecC
Q 024544 161 VSLETLKEFHRRRVLILA-NSGADLIAFE---TIPNKLE-A---KAYAELLEEE-----GITIPAWFSFNSKDGINVVSG 227 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~-~~gvD~i~~E---T~~~~~E-~---~a~~~a~~~~-----~~~~Pv~iSf~~~~~~~l~~G 227 (266)
.+.+..+++.+.-++.+. +..|+.+++- -+.+.++ + +++++++++. ..++|++|.+ .|
T Consensus 311 a~~e~v~~~~~~~l~ii~~d~~vk~i~vnIfGGI~~cd~vA~t~~GIi~A~~~~~~~~~~~~~PivVRl---------~G 381 (425)
T 3mwd_A 311 PSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRR---------GG 381 (425)
T ss_dssp CCHHHHHHHHHHHHHHTTSSCCTTCEEEEECBCBCSSSCHHHHHHHHHHHHHHTHHHHHHTTEEEEEEC---------BS
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCcccHHHHHHHHhHHHHHHHHhhhccccCCCcEEEEC---------Cc
Confidence 577777777666666554 4678877654 4455555 3 6789999875 2468999877 69
Q ss_pred chHHHhhhHHhhhhhhhhccccc
Q 024544 228 DSILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 228 ~~~~~a~~~~~~~~~~~avGiNC 250 (266)
+..++..+.++.. + .-+|+..
T Consensus 382 tn~~eg~~il~~~-g-~~lgip~ 402 (425)
T 3mwd_A 382 PNYQEGLRVMGEV-G-KTTGIPI 402 (425)
T ss_dssp TTHHHHHHHHHHH-H-HHHTCCE
T ss_pred CCHHHHHHHHHhC-C-cccCCce
Confidence 9999998888753 2 3345544
No 264
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=33.87 E-value=75 Score=26.24 Aligned_cols=30 Identities=30% Similarity=0.407 Sum_probs=18.8
Q ss_pred hHHhhhcCCCeEEeeccc------hhhhHHHHHHHH
Q 024544 174 VLILANSGADLIAFETIP------NKLEAKAYAELL 203 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~------~~~E~~a~~~a~ 203 (266)
++...++|+|++-|--++ ++++++.+.+.+
T Consensus 15 a~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~ 50 (205)
T 1nsj_A 15 ALFSVESGADAVGFVFYPKSKRYISPEDARRISVEL 50 (205)
T ss_dssp HHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHS
T ss_pred HHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhC
Confidence 455667899999888544 344455544433
No 265
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=33.84 E-value=1.5e+02 Score=27.57 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=63.3
Q ss_pred CchhHHHHhhhhhhccccEEEechhhhhhh-hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccc
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQATIQ-GFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~-~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (266)
+|...++..+..-++|.+.|+..-.-.... .-..+.++. ...+.+++.|+.|++
T Consensus 43 ~~~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~-~~l~~~d~vv~~a~~------------------------ 97 (515)
T 3icg_A 43 NPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQ-TWMKRVEEIANYAFD------------------------ 97 (515)
T ss_dssp CCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCH-HHHHHHHHHHHHHHT------------------------
T ss_pred CCcCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCH-HHHHHHHHHHHHHHH------------------------
Confidence 466666666666788999998753311100 000122332 233344444444433
Q ss_pred cceEEEEecccccceecCCCccccCCC-CchhHHHHHHHhhhhhHHhhhcCCCeEEeeccchhh----------------
Q 024544 132 RPVLVAASVGSYGAYLADGSEYSGDYG-DAVSLETLKEFHRRRVLILANSGADLIAFETIPNKL---------------- 194 (266)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~gseY~g~y~-~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~---------------- 194 (266)
..++|.-.+=-++.+..+ .+. .....+.+.++.+..++.|.+. -+.++||.+....
T Consensus 98 ~Gi~vildlH~~~~w~~~------~~~~~~~~~~~~~~~w~~ia~~f~~~-~~~v~~el~NEP~~~~~~~~W~~~~~~~~ 170 (515)
T 3icg_A 98 NDMYVIINLHHENEWLKP------FYANEAQVKAQLTKVWTQIANNFKKY-GDHLIFETMNEPRPVGASLQWTGGSYENR 170 (515)
T ss_dssp TTCEEEEECCSCTTTCCC------SGGGHHHHHHHHHHHHHHHHHHTTTC-CTTEEEECCSCCCCCCGGGTTSCCCHHHH
T ss_pred CCCEEEEecCCCCccccc------cccccHHHHHHHHHHHHHHHHHhcCC-CCeEEEEeccCCCCCCcccccCCCchhHH
Confidence 245666666444322111 111 1123455666666666777653 3578899987654
Q ss_pred -----hHHHHHHHHhhc
Q 024544 195 -----EAKAYAELLEEE 206 (266)
Q Consensus 195 -----E~~a~~~a~~~~ 206 (266)
-.+++++++|+.
T Consensus 171 ~~l~~~~~~~v~aIRa~ 187 (515)
T 3icg_A 171 EVVNRYNLTAVNAIRAT 187 (515)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 145677788876
No 266
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=33.28 E-value=47 Score=28.15 Aligned_cols=29 Identities=14% Similarity=0.183 Sum_probs=24.7
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEeec
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFET 189 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~ET 189 (266)
.+.+++.++..+.++.|.+.|+|+|++=.
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaC 70 (255)
T 2jfz_A 42 KDPTTIKQFGLEALDFFKPHEIELLIVAC 70 (255)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCCSCEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 46788899888889999999999998764
No 267
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=33.20 E-value=18 Score=31.80 Aligned_cols=27 Identities=26% Similarity=0.377 Sum_probs=24.3
Q ss_pred cccCchhHHHHhhhhhhccccEEEech
Q 024544 50 LVSSPHLVRKVHLDYLDAGANIIITAS 76 (266)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnT 76 (266)
.++++|.|++.-+-=++||||.|.|.|
T Consensus 167 ~L~d~e~i~~A~~ia~eaGADfVKTST 193 (281)
T 2a4a_A 167 ELKTEDLIIKTTLAVLNGNADFIKTST 193 (281)
T ss_dssp HHCSHHHHHHHHHHHHTTTCSEEECCC
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeCC
Confidence 458889898888889999999999999
No 268
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=32.99 E-value=46 Score=28.38 Aligned_cols=64 Identities=17% Similarity=0.187 Sum_probs=43.2
Q ss_pred eeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHH---hhhhhhhhcccccC
Q 024544 187 FETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA---DSCEQVVAVGINCT 251 (266)
Q Consensus 187 ~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~---~~~~~~~avGiNC~ 251 (266)
+.|+.+++.++.+-+.+++.+..++|++-+.... +..+.|-+.+++...+ ...+++...|+-|.
T Consensus 101 i~sVds~~~a~~L~~~a~~~g~~~~V~LqVdtG~-e~~R~Gv~~ee~~~l~~~i~~l~~L~l~GlmTh 167 (244)
T 3r79_A 101 VESIDREKIARALSEECARQGRSLRFYVQVNTGL-EPQKAGIDPRETVAFVAFCRDELKLPVEGLMCI 167 (244)
T ss_dssp EEEECSHHHHHHHHHHHHHHTCCCEEEEEBCTTC-CTTSCSBCHHHHHHHHHHHHHTSCCCCCEEECC
T ss_pred EEeeCCHHHHHHHHHHHHHcCCCceEEEEEECCC-CcCCCCCCHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 5799999998888887777665678888886531 1345687777665544 33445666777653
No 269
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=32.88 E-value=52 Score=30.35 Aligned_cols=70 Identities=16% Similarity=0.170 Sum_probs=40.9
Q ss_pred hhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCC---------c--eeecCchHHHhhhHHh---hhhhh
Q 024544 178 ANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG---------I--NVVSGDSILECASIAD---SCEQV 243 (266)
Q Consensus 178 ~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~---------~--~l~~G~~~~~a~~~~~---~~~~~ 243 (266)
++.|+..+.+ -+..|++.+.+++++.+...+|++-+....+ | .-+-|-+.+++...+. ...++
T Consensus 140 ~~~gv~~~~v---ds~~el~~l~~~a~~~~~~~~V~lRvn~~~~~~~~~~i~tG~~~sKfG~~~~~~~~~~~~~~~~~~l 216 (441)
T 3n2b_A 140 LQLKIKCFNV---ESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNL 216 (441)
T ss_dssp HHTTCSEEEE---CSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHHHHTSSSSBCGGGHHHHHHHHHHCTTE
T ss_pred HHCCCCEEEE---cCHHHHHHHHHHHHhcCCCcEEEEEeccCCCcCCCcccccCCCCCcccCCHHHHHHHHHHHhcCCCe
Confidence 3457765544 4677888777777765555777777754311 1 1345777766655443 22345
Q ss_pred hhccccc
Q 024544 244 VAVGINC 250 (266)
Q Consensus 244 ~avGiNC 250 (266)
...|+-|
T Consensus 217 ~l~Glh~ 223 (441)
T 3n2b_A 217 DVHGIDC 223 (441)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 5566655
No 270
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=32.81 E-value=40 Score=30.01 Aligned_cols=45 Identities=18% Similarity=0.084 Sum_probs=31.7
Q ss_pred HhhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceee
Q 024544 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.|.+++..++++|.+++ +|- -.+++|++.+++++++.+ +++++.+
T Consensus 95 ~h~~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~~--~~~~v~~ 141 (383)
T 3oqb_A 95 ARPGLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSKG--VKHGTVQ 141 (383)
T ss_dssp SSHHHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHTT--CCEEECC
T ss_pred HHHHHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHcC--CeEEEEe
Confidence 36667777788888866 684 567888888888887754 4555444
No 271
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=32.73 E-value=43 Score=28.76 Aligned_cols=45 Identities=20% Similarity=0.293 Sum_probs=31.3
Q ss_pred hhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 170 HRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
|.+.+..++++|.. +++| .-.+.+|++.+++++++.+ +++++.|.
T Consensus 79 h~~~~~~al~~gk~-vl~EKP~~~~~~~~~~l~~~a~~~g--~~~~v~~~ 125 (308)
T 3uuw_A 79 HYEIIKILLNLGVH-VYVDKPLASTVSQGEELIELSTKKN--LNLMVGFN 125 (308)
T ss_dssp HHHHHHHHHHTTCE-EEECSSSSSSHHHHHHHHHHHHHHT--CCEEECCG
T ss_pred HHHHHHHHHHCCCc-EEEcCCCCCCHHHHHHHHHHHHHcC--CEEEEeec
Confidence 55566667778887 4568 4567888999988888755 55555553
No 272
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=32.66 E-value=43 Score=29.18 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=32.7
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+++...+++|.+++ +| -..+..|++.+++++++.+ +++++.+.
T Consensus 84 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~v~~~ 131 (312)
T 3o9z_A 84 LHYPQIRMALRLGANAL-SEKPLVLWPEEIARLKELEARTG--RRVYTVLQ 131 (312)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSSSCSCHHHHHHHHHHHHHHC--CCEEECCG
T ss_pred hhHHHHHHHHHCCCeEE-EECCCCCCHHHHHHHHHHHHHcC--CEEEEEee
Confidence 46777777888887755 57 3457888888888888765 56655553
No 273
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=32.63 E-value=1.9e+02 Score=25.25 Aligned_cols=84 Identities=7% Similarity=-0.078 Sum_probs=49.5
Q ss_pred hHHhhhcCCCeEEeeccc-------------hhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhh-
Q 024544 174 VLILANSGADLIAFETIP-------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS- 239 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~-------------~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~- 239 (266)
++.|.++||+.+-+|-.. +.+|...-++++++...+-++.|.-..+. . ...++++++....
T Consensus 103 v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtda---a--~~gl~~ai~Ra~ay 177 (287)
T 3b8i_A 103 VVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNA---E--LIDVDAVIQRTLAY 177 (287)
T ss_dssp HHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEET---T--TSCHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechh---h--hcCHHHHHHHHHHH
Confidence 455667999999999654 23466666666666543334544443322 1 2235666654432
Q ss_pred -hhhhhhcccccCC-cchhhhhhee
Q 024544 240 -CEQVVAVGINCTS-PRFIHGLILS 262 (266)
Q Consensus 240 -~~~~~avGiNC~~-p~~~~~~l~~ 262 (266)
..|+++|=+-|.. ++.+..+-+.
T Consensus 178 ~eAGAd~i~~e~~~~~~~~~~i~~~ 202 (287)
T 3b8i_A 178 QEAGADGICLVGVRDFAHLEAIAEH 202 (287)
T ss_dssp HHTTCSEEEEECCCSHHHHHHHHTT
T ss_pred HHcCCCEEEecCCCCHHHHHHHHHh
Confidence 2578888888874 4566555443
No 274
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=32.43 E-value=2.5e+02 Score=24.36 Aligned_cols=52 Identities=15% Similarity=0.195 Sum_probs=34.5
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhh-----------HHHHHHHHhhcCccccccee
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLE-----------AKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E-----------~~a~~~a~~~~~~~~Pv~iS 215 (266)
..+...++.+..++.+.+.. .+| +|.+..... ++.+++++|+.+++.|+++.
T Consensus 136 ~~~~~~~~w~~~a~r~k~~p-~Vi-~el~NEp~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~ 198 (327)
T 3pzt_A 136 NKEKAKEFFKEMSSLYGNTP-NVI-YEIANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVG 198 (327)
T ss_dssp THHHHHHHHHHHHHHHTTCT-TEE-EECCSCCCSSCCTTTTHHHHHHHHHHHHHHHCSSSCEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCC-cEE-EEeccCCCCCcccHHHHHHHHHHHHHHHHhhCCCCEEEEe
Confidence 45677788887778776543 455 887754421 45677788887666676664
No 275
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=32.41 E-value=2.7e+02 Score=24.79 Aligned_cols=76 Identities=9% Similarity=0.087 Sum_probs=39.6
Q ss_pred hhhhhHHhhhcCCCeEEeec--c---chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhh
Q 024544 170 HRRRVLILANSGADLIAFET--I---PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVV 244 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET--~---~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~ 244 (266)
+...++.|.+.|+|+|-+=. + +.. . ...++.+++.- ++|++..- |-+.+++...+.. ..++
T Consensus 252 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~-~-~~~~~~i~~~~-~iPvi~~G----------gi~~~~a~~~l~~-g~aD 317 (365)
T 2gou_A 252 YTAAAALLNKHRIVYLHIAEVDWDDAPDT-P-VSFKRALREAY-QGVLIYAG----------RYNAEKAEQAIND-GLAD 317 (365)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCC-C-HHHHHHHHHHC-CSEEEEES----------SCCHHHHHHHHHT-TSCS
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcCCCCCc-c-HHHHHHHHHHC-CCcEEEeC----------CCCHHHHHHHHHC-CCcc
Confidence 34456778889999997632 1 111 1 12334444432 47776443 2235666665554 3466
Q ss_pred hcccc---cCCcchhhhh
Q 024544 245 AVGIN---CTSPRFIHGL 259 (266)
Q Consensus 245 avGiN---C~~p~~~~~~ 259 (266)
+|++- +..|+...++
T Consensus 318 ~V~igR~~i~~P~l~~~~ 335 (365)
T 2gou_A 318 MIGFGRPFIANPDLPERL 335 (365)
T ss_dssp EEECCHHHHHCTTHHHHH
T ss_pred eehhcHHHHhCchHHHHH
Confidence 66652 2346555444
No 276
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A*
Probab=32.39 E-value=57 Score=29.45 Aligned_cols=41 Identities=22% Similarity=0.118 Sum_probs=28.1
Q ss_pred ccccCchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHH
Q 024544 49 CLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (266)
Q Consensus 49 ~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~ 94 (266)
+.++.|+-...+++ |-+.|||+++|-= +..+++.|++.+.+
T Consensus 59 lDLk~~~gr~~l~~--Lv~~ADV~venfr---PG~~~rlGl~ye~L 99 (360)
T 2yim_A 59 ADLKSDQGLELALK--LIAKADVLIEGYR---PGVTERLGLGPEEC 99 (360)
T ss_dssp CCTTSHHHHHHHHH--HHTTCSEEEECSC---TTHHHHHTCSHHHH
T ss_pred EeCCCHHHHHHHHH--HHhhCCEEEEcCC---cchHhhcCCCHHHH
Confidence 45678876555554 4567999999863 55567779986543
No 277
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=32.19 E-value=2.8e+02 Score=24.93 Aligned_cols=46 Identities=17% Similarity=0.100 Sum_probs=25.9
Q ss_pred CchhHHHHhhhhhhccccEEEec-hhhhhhhhhhccCCCHHHHHHHHHHHHHH
Q 024544 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEI 104 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~Tn-Ty~a~~~~l~~~g~~~~~~~~l~~~av~l 104 (266)
+.+.+++.-+-++++|++-|..+ |-+=. . -++.+|-.++++.+++.
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~GTTGE~-~-----~Ls~eEr~~vi~~~ve~ 124 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGGTTGEG-Q-----LMSWDEHIMLIGHTVNC 124 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccccCh-h-----hCCHHHHHHHHHHHHHH
Confidence 34577777777889999955443 32211 1 23445555555555543
No 278
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=32.09 E-value=3.4e+02 Score=27.00 Aligned_cols=43 Identities=9% Similarity=0.023 Sum_probs=31.1
Q ss_pred hHHhhhcCCCeEEeecc--chhhhHHHHHHHHhhcCc-ccccceee
Q 024544 174 VLILANSGADLIAFETI--PNKLEAKAYAELLEEEGI-TIPAWFSF 216 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~--~~~~E~~a~~~a~~~~~~-~~Pv~iSf 216 (266)
+++..+.++|++.+=.. .++..++.+++.+++.+. ++||++.-
T Consensus 640 v~aA~e~~adiVglSsl~~~~~~~~~~vi~~L~~~G~~~i~VivGG 685 (727)
T 1req_A 640 ARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGG 685 (727)
T ss_dssp HHHHHHTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHcCCCEEEEeeecHhHHHHHHHHHHHHHhcCCCCCEEEEcC
Confidence 45556789999987653 367788889999998764 46777654
No 279
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=32.01 E-value=1.1e+02 Score=25.45 Aligned_cols=78 Identities=22% Similarity=0.262 Sum_probs=42.2
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhc---CcccccceeeecC--CC-cee-----ecCchHHHhhhHHhh-hh
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEE---GITIPAWFSFNSK--DG-INV-----VSGDSILECASIADS-CE 241 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~---~~~~Pv~iSf~~~--~~-~~l-----~~G~~~~~a~~~~~~-~~ 241 (266)
++.+.+.|+|++-+=......-++.+++.+++. +...|..+.+++. .+ ..+ .++ +..+.+..+.. ..
T Consensus 74 ~~~~~~~Gad~vtvH~~~g~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~~~~~l~~~~~~~~-~~~d~Vl~ma~~~~ 152 (239)
T 1dbt_A 74 MKRLASLGVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEK-SLIDTVVHYSKQAE 152 (239)
T ss_dssp HHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBCS-CHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEeCcCCHHHHHHHHHHHHhhhccCCCCccEEEEEEcCCCCHHHHHHHhccCC-CHHHHHHHHHHHHH
Confidence 455778999999877666544457788888876 5322523333332 21 223 233 34455544322 13
Q ss_pred hhhhcccccCC
Q 024544 242 QVVAVGINCTS 252 (266)
Q Consensus 242 ~~~avGiNC~~ 252 (266)
+.-+-|+-|..
T Consensus 153 ~~G~~g~v~~~ 163 (239)
T 1dbt_A 153 ESGLDGVVCSV 163 (239)
T ss_dssp HTTCSEEECCG
T ss_pred HhCCCEEEECH
Confidence 33356677765
No 280
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=31.92 E-value=13 Score=32.73 Aligned_cols=60 Identities=15% Similarity=0.071 Sum_probs=21.3
Q ss_pred hhcCCCeEEeeccchhhhHHHHHHHHhhcC---cccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccccc
Q 024544 178 ANSGADLIAFETIPNKLEAKAYAELLEEEG---ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (266)
Q Consensus 178 ~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~---~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC 250 (266)
.++|+|+|.+-|++ +++++.+++.++..+ +++|+.+|- |-+.+.+..++. .+++.||+-.
T Consensus 216 ~~aGaD~I~ld~~~-~~~l~~~v~~l~~~~~g~~~v~I~ASG----------GIt~~ni~~~~~--~GvD~i~vGs 278 (294)
T 3c2e_A 216 IEAGADVIMLDNFK-GDGLKMCAQSLKNKWNGKKHFLLECSG----------GLNLDNLEEYLC--DDIDIYSTSS 278 (294)
T ss_dssp HHHTCSEEECCC----------------------CCEEEEEC----------CCCC------CC--CSCSEEECGG
T ss_pred HHcCCCEEEECCCC-HHHHHHHHHHhcccccCCCCeEEEEEC----------CCCHHHHHHHHH--cCCCEEEEec
Confidence 34688888888864 667777666655420 124555444 333444433333 4667766644
No 281
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=31.84 E-value=42 Score=28.89 Aligned_cols=67 Identities=16% Similarity=0.165 Sum_probs=43.1
Q ss_pred CCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhH---HhhhhhhhhcccccC
Q 024544 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI---ADSCEQVVAVGINCT 251 (266)
Q Consensus 182 vD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~---~~~~~~~~avGiNC~ 251 (266)
.|+ ..++.++++++.+-+++++.+..++|++-+....+ .-+.|-+.+++... +....++...|+-|-
T Consensus 135 ~~l--~~~Vds~~~l~~L~~~a~~~~~~~~V~lkVdtGme-~~R~G~~~ee~~~l~~~i~~~~~l~l~Gl~th 204 (282)
T 3cpg_A 135 VDT--IESVDSIDLAEKISRRAVARGITVGVLLEVNESGE-ESKSGCDPAHAIRIAQKIGTLDGIELQGLMTI 204 (282)
T ss_dssp CSE--EEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSC-TTSSSBCGGGHHHHHHHHHTCTTEEEEEEECC
T ss_pred CCE--EEEeCCHHHHHHHHHHHHhcCCCceEEEEEECCCC-CCCCCcCHHHHHHHHHHHHhCCCceEEeEEEE
Confidence 454 46888898888888777665545788888754321 03467666655443 333356677888874
No 282
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=31.81 E-value=2.7e+02 Score=24.56 Aligned_cols=89 Identities=12% Similarity=0.062 Sum_probs=51.7
Q ss_pred chhHHH---HHHHhhhhhHHhhhcCCCeEEeecc----------ch-----------h-hh---HHHHHHHHhhc-Cccc
Q 024544 160 AVSLET---LKEFHRRRVLILANSGADLIAFETI----------PN-----------K-LE---AKAYAELLEEE-GITI 210 (266)
Q Consensus 160 ~~~~~e---~~~~~~~qi~~l~~~gvD~i~~ET~----------~~-----------~-~E---~~a~~~a~~~~-~~~~ 210 (266)
.+|.+| +.+.|.+-++...++|.|.|=+=-- |. + +. +..+++++++. +.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 355554 5556777677778899998744321 11 1 12 34556666654 5568
Q ss_pred ccceeeecCCCceeecCchHHHhhhHHhh--hhhhhhccccc
Q 024544 211 PAWFSFNSKDGINVVSGDSILECASIADS--CEQVVAVGINC 250 (266)
Q Consensus 211 Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~--~~~~~avGiNC 250 (266)
|+.+-++..+. ...|.++++++..+.. ..+++.|-+-+
T Consensus 221 pV~vRls~~~~--~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 221 PLFVRVSATDW--GEGGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp CEEEEEESCCC--STTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred eEEEEeccccc--cCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 89988876432 2246677776655432 24667666543
No 283
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=31.78 E-value=52 Score=28.58 Aligned_cols=45 Identities=11% Similarity=-0.040 Sum_probs=33.8
Q ss_pred HhhhhhHHhhhcCCCeEEee---ccchhhhHHHHHHHHhhcCcccccceee
Q 024544 169 FHRRRVLILANSGADLIAFE---TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E---T~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.|.+.+..++++|..+| .| +-++..|++.+.+++++.+ +++++++
T Consensus 77 ~h~~~~~~al~aG~~Vi-~ekP~~a~~~~~~~~l~~~a~~~g--~~~~v~~ 124 (304)
T 3bio_A 77 EVERTALEILKKGICTA-DSFDIHDGILALRRSLGDAAGKSG--AAAVIAS 124 (304)
T ss_dssp HHHHHHHHHHTTTCEEE-ECCCCGGGHHHHHHHHHHHHHHHT--CEEECSC
T ss_pred hhHHHHHHHHHcCCeEE-ECCCCCCCCHHHHHHHHHHHHhCC--CEEEEeC
Confidence 45666777888898876 58 3578899999999988865 5666665
No 284
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=31.76 E-value=2.7e+02 Score=24.55 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=16.7
Q ss_pred hhHHHHhhhhhh-------ccccEEEechh
Q 024544 55 HLVRKVHLDYLD-------AGANIIITASY 77 (266)
Q Consensus 55 e~V~~iH~~Yl~-------AGAdiI~TnTy 77 (266)
+-|.++-++|.+ ||.|.|.-|--
T Consensus 137 ~eI~~ii~~f~~aA~~a~~aGfDgVEih~a 166 (340)
T 3gr7_A 137 ADIEETVQAFQNGARRAKEAGFDVIEIHAA 166 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 356777777764 59999988854
No 285
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=31.72 E-value=2.7e+02 Score=24.53 Aligned_cols=61 Identities=13% Similarity=0.117 Sum_probs=39.3
Q ss_pred hhhhhHHhhhcCCCeEEeec-c--chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 170 HRRRVLILANSGADLIAFET-I--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET-~--~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
|..++.. ++.|+|.|.+=- . ..+.++...++.+++. .|+-+++-+.++ .|..+..++..+.
T Consensus 146 ~l~~~~~-~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~---~~~~i~~H~Hn~----~G~a~an~laA~~ 209 (320)
T 3dxi_A 146 FLSKLKA-IDKIADLFCMVDSFGGITPKEVKNLLKEVRKY---THVPVGFHGHDN----LQLGLINSITAID 209 (320)
T ss_dssp SGGGGGG-GTTTCSEEEEECTTSCCCHHHHHHHHHHHHHH---CCSCEEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHH-hhCCCCEEEECcccCCCCHHHHHHHHHHHHHh---CCCeEEEEeCCC----CccHHHHHHHHHH
Confidence 3334444 367999987653 2 3567788888888874 345577877765 4766666665554
No 286
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=31.67 E-value=52 Score=28.29 Aligned_cols=46 Identities=15% Similarity=0.101 Sum_probs=33.7
Q ss_pred HhhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+++..++++|..++. |- -.+++|++.+++++++.+ +++++.+.
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g--~~~~~~~~ 124 (294)
T 1lc0_A 77 SHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQKG--RVLHEEHV 124 (294)
T ss_dssp GHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHTT--CCEEEECG
T ss_pred hHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHhC--CEEEEEEh
Confidence 467777788888987654 83 447889999999888865 56666554
No 287
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=31.08 E-value=1.6e+02 Score=24.35 Aligned_cols=72 Identities=11% Similarity=0.042 Sum_probs=37.8
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccch--hhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHH
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIPN--KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~--~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~ 237 (266)
..+.+.+..++.++...+.||. |.+|+.+. +.....+.+.+++.+ -| .+.++++..-....|.++.+++..+
T Consensus 135 ~~~~~~~~l~~l~~~a~~~gv~-l~lE~~~~~~~~~~~~~~~l~~~~~--~~-~vg~~~D~~h~~~~g~d~~~~l~~~ 208 (301)
T 3cny_A 135 EWDEVCKGLNHYGEIAAKYGLK-VAYHHHMGTGIQTKEETDRLMANTD--PK-LVGLLYDTGHIAVSDGDYMALLNAH 208 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSSSCSHHHHHHHHHTSC--TT-TCEEEEEHHHHHHHHSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCE-EEEecCCCcccCCHHHHHHHHHhCC--cc-ceeEEechHHHHHcCCCHHHHHHHH
Confidence 4556677777777777778996 56698752 122233444455443 23 2333333222223455566655543
No 288
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=30.99 E-value=82 Score=29.66 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=34.2
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhc-Ccccccceee
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEE-GITIPAWFSF 216 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~-~~~~Pv~iSf 216 (266)
+...++.|+|+|++=-+.+.++++.+.+.+++. +.+.++|.-+
T Consensus 178 i~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakI 221 (470)
T 1e0t_A 178 LIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKI 221 (470)
T ss_dssp HHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEE
T ss_pred HHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 455677899999999999999999999999876 5445666544
No 289
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=30.85 E-value=64 Score=28.75 Aligned_cols=48 Identities=17% Similarity=-0.006 Sum_probs=32.5
Q ss_pred hhhHHhhhcCCCeEEeeccchh---hhHHHHHHHHhhcCcccccceeeecCCC
Q 024544 172 RRVLILANSGADLIAFETIPNK---LEAKAYAELLEEEGITIPAWFSFNSKDG 221 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~---~E~~a~~~a~~~~~~~~Pv~iSf~~~~~ 221 (266)
..++++++.|++.|++|++..- .++..+++.+.+. ++||+++-.|..+
T Consensus 230 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~--gi~VV~~Sr~~~G 280 (330)
T 1wsa_A 230 VLVNAALQAGAKGIIHAGMGNGNPFPLTQNALEKAAKS--GVVVARSSRVGSG 280 (330)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSSS
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CCEEEEECCCCCC
Confidence 4567788889999999998652 3444444433333 4899988877654
No 290
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=30.70 E-value=66 Score=27.81 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=25.4
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEee--ccc
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFE--TIP 191 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~E--T~~ 191 (266)
.+.+++.++-.+.++.|.+.|+|+|++= |.+
T Consensus 64 ~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas 96 (286)
T 2jfq_A 64 RPGEQVKQYTVEIARKLMEFDIKMLVIACNTAT 96 (286)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchh
Confidence 4678888888888999999999999985 444
No 291
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=30.58 E-value=68 Score=27.77 Aligned_cols=32 Identities=9% Similarity=0.097 Sum_probs=26.0
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEeeccch
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFETIPN 192 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~ 192 (266)
.+.+++.++..+.++.|.+.|+|+|++=..+.
T Consensus 66 ~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTa 97 (290)
T 2vvt_A 66 RPAEQVVQFTWEMADFLLKKRIKMLVIACNTA 97 (290)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCcch
Confidence 46788888888888999999999999875443
No 292
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=30.53 E-value=69 Score=23.07 Aligned_cols=37 Identities=14% Similarity=0.074 Sum_probs=24.0
Q ss_pred hhcCCCeEEeeccchhhhHHHHHHHHhhcCccccccee
Q 024544 178 ANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 178 ~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
.+..+|++++..++.. +...+++.+++..+..|+++-
T Consensus 45 ~~~~~dlvi~d~~~~~-~g~~~~~~l~~~~~~~pii~l 81 (142)
T 2qxy_A 45 RREKIDLVFVDVFEGE-ESLNLIRRIREEFPDTKVAVL 81 (142)
T ss_dssp TTSCCSEEEEECTTTH-HHHHHHHHHHHHCTTCEEEEE
T ss_pred hccCCCEEEEeCCCCC-cHHHHHHHHHHHCCCCCEEEE
Confidence 3457899999985544 445556666665546777653
No 293
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=30.38 E-value=53 Score=28.42 Aligned_cols=45 Identities=16% Similarity=0.118 Sum_probs=31.9
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccc-cceee
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIP-AWFSF 216 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~P-v~iSf 216 (266)
|..++..+.+.++|.|++=+ +..++..+++.+++.+...| .++++
T Consensus 184 ~~~~l~~i~~~~~d~v~~~~--~~~~~~~~~~~~~~~g~~~~~~i~g~ 229 (375)
T 3i09_A 184 FSSFLLQAQSSKAQILGLAN--AGGDTVNAIKAAKEFGITKTMKLAAL 229 (375)
T ss_dssp CHHHHHHHHHTCCSEEEEEC--CHHHHHHHHHHHHHTTGGGTCEEEES
T ss_pred HHHHHHHHHhCCCCEEEEec--CchhHHHHHHHHHHcCCCcCceEEec
Confidence 34456667778999998743 44577888888998876667 55555
No 294
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=30.33 E-value=2.9e+02 Score=24.47 Aligned_cols=78 Identities=13% Similarity=0.146 Sum_probs=46.0
Q ss_pred chhHHH---HHHHhhhhhHHhhhcCCCeEEeec--------c--ch------------hhhH---HHHHHHHhhc-Cccc
Q 024544 160 AVSLET---LKEFHRRRVLILANSGADLIAFET--------I--PN------------KLEA---KAYAELLEEE-GITI 210 (266)
Q Consensus 160 ~~~~~e---~~~~~~~qi~~l~~~gvD~i~~ET--------~--~~------------~~E~---~a~~~a~~~~-~~~~ 210 (266)
.+|.+| +.+.|.+-++...++|.|.|=+=- | |. .+.+ ..+++++++. +.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 355554 555676667777789999885541 1 11 1123 4556666664 4467
Q ss_pred ccceeeecCCCceeecCchHHHhhhHHhh
Q 024544 211 PAWFSFNSKDGINVVSGDSILECASIADS 239 (266)
Q Consensus 211 Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~ 239 (266)
|+++-++..+ ....|.++++++..+..
T Consensus 212 pv~vRls~~~--~~~~g~~~~~~~~~a~~ 238 (343)
T 3kru_A 212 PIFVRVSADD--YMEGGINIDMMVEYINM 238 (343)
T ss_dssp CEEEEEECCC--SSTTSCCHHHHHHHHHH
T ss_pred CeEEEeechh--hhccCccHHHHHHHHHH
Confidence 9988887632 12246777777665543
No 295
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=30.30 E-value=1.5e+02 Score=24.54 Aligned_cols=30 Identities=20% Similarity=0.221 Sum_probs=21.1
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEeeccc
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFETIP 191 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~ 191 (266)
...+.+.+..++..+...+.||. |.+|+.+
T Consensus 139 ~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~ 168 (287)
T 3kws_A 139 ETRDFLCEQFNEMGTFAAQHGTS-VIFEPLN 168 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC-EEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCE-EEEEecC
Confidence 34566677777777777778996 5569775
No 296
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=30.28 E-value=77 Score=26.69 Aligned_cols=46 Identities=20% Similarity=0.118 Sum_probs=31.1
Q ss_pred hhhhhHHhhhc-CCCeEEeeccc--hhhhHHHHHHHHhhcCcccccceeee
Q 024544 170 HRRRVLILANS-GADLIAFETIP--NKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 170 ~~~qi~~l~~~-gvD~i~~ET~~--~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
|.+.++..++. +||++=+|-.. .-...+.+++.+++.+ ..+++|+.
T Consensus 85 ~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~--~kvI~S~H 133 (238)
T 1sfl_A 85 YLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYN--KEVIISHH 133 (238)
T ss_dssp HHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcC--CEEEEEec
Confidence 33344555554 79999999766 4455666777666643 78999985
No 297
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=30.22 E-value=1.1e+02 Score=27.86 Aligned_cols=79 Identities=18% Similarity=0.165 Sum_probs=49.1
Q ss_pred ccceEEEEecccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEee-ccchhhhHHHHHHHHhhcCcc
Q 024544 131 SRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGIT 209 (266)
Q Consensus 131 ~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~E-T~~~~~E~~a~~~a~~~~~~~ 209 (266)
+.++.|.---|+.-. .+.-.|+. .+.+.+.+.-.+.++.+.+.|.|-|.+- =-++..+...+-+.+.+.. +
T Consensus 133 ~~piRIGvN~GSL~~------~ll~~yg~-~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S~v~~~i~ayr~la~~~-d 204 (366)
T 3noy_A 133 GVAVRIGVNSGSLEK------DLLEKYGY-PSAEALAESALRWSEKFEKWGFTNYKVSIKGSDVLQNVRANLIFAERT-D 204 (366)
T ss_dssp TCEEEEEEEGGGCCH------HHHHHHSS-CCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSHHHHHHHHHHHHHHC-C
T ss_pred CCCEEEecCCcCCCH------HHHHhcCC-CCHHHHHHHHHHHHHHHHhCCCCeEEEeeecCChHHHHHHHHHHHhcc-C
Confidence 456777533333321 11223442 3677888888888888988888666544 3356667777777666543 6
Q ss_pred cccceeee
Q 024544 210 IPAWFSFN 217 (266)
Q Consensus 210 ~Pv~iSf~ 217 (266)
-|..+-+|
T Consensus 205 yPLHlGvT 212 (366)
T 3noy_A 205 VPLHIGIT 212 (366)
T ss_dssp CCEEECCS
T ss_pred CCEEEccC
Confidence 88887775
No 298
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=30.15 E-value=33 Score=28.84 Aligned_cols=38 Identities=24% Similarity=0.332 Sum_probs=25.9
Q ss_pred hHHhhhcCCCeEEe--eccchhhhHHHHHHHHhhcCcccccceee
Q 024544 174 VLILANSGADLIAF--ETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 174 i~~l~~~gvD~i~~--ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
++.+.++|+|++.+ |+.. ++...++.+++.+ +.+.+++
T Consensus 80 i~~~~~aGad~itvH~Ea~~---~~~~~i~~i~~~G--~k~gval 119 (228)
T 3ovp_A 80 VKPMAVAGANQYTFHLEATE---NPGALIKDIRENG--MKVGLAI 119 (228)
T ss_dssp HHHHHHHTCSEEEEEGGGCS---CHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHcCCCEEEEccCCch---hHHHHHHHHHHcC--CCEEEEE
Confidence 45677899999987 4333 4566777788765 5566655
No 299
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=30.12 E-value=41 Score=28.59 Aligned_cols=67 Identities=19% Similarity=0.126 Sum_probs=44.0
Q ss_pred CCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHH---hhhhhhhhcccccC
Q 024544 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA---DSCEQVVAVGINCT 251 (266)
Q Consensus 182 vD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~---~~~~~~~avGiNC~ 251 (266)
+|+ +.|+.++..++.+-+.+++.+..++|++-+....+ ..+.|-+++++...+ ...+++...|+-|.
T Consensus 98 ~~~--i~sVds~~~a~~l~~~a~~~~~~~~V~lqVntG~e-~~R~G~~~ee~~~l~~~i~~~~~l~l~Glmt~ 167 (245)
T 3sy1_A 98 FDW--CITIDRLRIATRLNDQRPAELPPLNVLIQINISDE-NSKSGIQLAELDELAAAVAELPRLRLRGLSAI 167 (245)
T ss_dssp CSE--EEEECCHHHHHHHHHHSCTTSCCEEEEEEBCCSCT-TCCSSBCGGGHHHHHHHHTTCTTEEEEEEECC
T ss_pred CCE--EEecCCHHHHHHHHHHHHHcCCCceEEEEEECCCC-cCCcCCCHHHHHHHHHHHHcCCCCeEEEEEEe
Confidence 454 57889999988888877766656788888765311 335687666655444 33456667788654
No 300
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=29.98 E-value=74 Score=27.93 Aligned_cols=73 Identities=12% Similarity=0.146 Sum_probs=38.8
Q ss_pred hHHhhhcCCCeEEeecc--chh------hhHHHHHHHHhhcCcccccceeeecCCCceeec-Cc---hHHHhhhHHhhhh
Q 024544 174 VLILANSGADLIAFETI--PNK------LEAKAYAELLEEEGITIPAWFSFNSKDGINVVS-GD---SILECASIADSCE 241 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~--~~~------~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~-G~---~~~~a~~~~~~~~ 241 (266)
++..++.|+|.+-+=.. ++. .+++.+.+.+++.+ +|+++-...... .+.+ .. .+..++..+.+ .
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G--~p~lv~~~~~g~-~v~~~~~~~~~v~~aa~~a~~-l 189 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNG--LLSIIEPVVRPP-RCGDKFDREQAIIDAAKELGD-S 189 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTT--CEEEEEEEECCC-SSCSCCCHHHHHHHHHHHHTT-S
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcC--CcEEEEEECCCC-ccccCCChhHHHHHHHHHHHH-c
Confidence 45556679998863222 222 55566666667655 887776543222 1211 22 24444444443 4
Q ss_pred hhhhccccc
Q 024544 242 QVVAVGINC 250 (266)
Q Consensus 242 ~~~avGiNC 250 (266)
+++.+++.-
T Consensus 190 GaD~iKv~~ 198 (304)
T 1to3_A 190 GADLYKVEM 198 (304)
T ss_dssp SCSEEEECC
T ss_pred CCCEEEeCC
Confidence 667666655
No 301
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=29.96 E-value=75 Score=29.01 Aligned_cols=48 Identities=17% Similarity=0.145 Sum_probs=30.4
Q ss_pred hhhhhHHh-hhcCCCeEEeecc---chhhh-HHHHHHHHhhcCcccccceeee
Q 024544 170 HRRRVLIL-ANSGADLIAFETI---PNKLE-AKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 170 ~~~qi~~l-~~~gvD~i~~ET~---~~~~E-~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
|+.-++.+ .+.+||.+++-.+ .+..+ ++++++++++.+.++|+++.|.
T Consensus 289 ~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~~ 341 (397)
T 3ufx_B 289 VYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA 341 (397)
T ss_dssp HHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEEE
T ss_pred HHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEcc
Confidence 33344544 4578998876332 33333 4677888887655699998883
No 302
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=29.94 E-value=28 Score=29.42 Aligned_cols=38 Identities=24% Similarity=0.261 Sum_probs=25.8
Q ss_pred hHHhhhcCCCeEE--eec-cchhhhHHHHHHHHhhcCcccccceee
Q 024544 174 VLILANSGADLIA--FET-IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 174 i~~l~~~gvD~i~--~ET-~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
++.+.++|+|.+. .|+ -+ .+..+++.+++.+ +.+.+++
T Consensus 73 i~~~~~aGAd~itvh~Ea~~~---~~~~~i~~i~~~G--~k~gv~l 113 (231)
T 3ctl_A 73 IAQLARAGADFITLHPETING---QAFRLIDEIRRHD--MKVGLIL 113 (231)
T ss_dssp HHHHHHHTCSEEEECGGGCTT---THHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHcCCCEEEECcccCCc---cHHHHHHHHHHcC--CeEEEEE
Confidence 5677889999995 455 33 3567778888765 4555555
No 303
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=29.75 E-value=56 Score=28.98 Aligned_cols=45 Identities=18% Similarity=0.151 Sum_probs=31.5
Q ss_pred HhhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceee
Q 024544 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.|.+++..++++|..+| +|- -.+.+|++.+++++++.+ +++++.+
T Consensus 79 ~H~~~~~~al~aGk~Vl-~EKPla~~~~e~~~l~~~a~~~g--~~~~v~~ 125 (364)
T 3e82_A 79 THAPLARLALNAGKHVV-VDKPFTLDMQEARELIALAEEKQ--RLLSVFH 125 (364)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSCSCSSHHHHHHHHHHHHHTT--CCEEECC
T ss_pred HHHHHHHHHHHCCCcEE-EeCCCcCCHHHHHHHHHHHHHhC--CeEEEEe
Confidence 35666677777887755 486 668888888888888755 5555544
No 304
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=29.74 E-value=1.5e+02 Score=28.76 Aligned_cols=109 Identities=12% Similarity=0.005 Sum_probs=0.0
Q ss_pred eecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeeccc-------------------hhhhHHHHHHHHhhc
Q 024544 146 YLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIP-------------------NKLEAKAYAELLEEE 206 (266)
Q Consensus 146 ~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~-------------------~~~E~~a~~~a~~~~ 206 (266)
.++|...|.+. .+.+.+..||+.+.+ .|+-+|+.|... .+...+.+.+++.+.
T Consensus 30 v~apm~~~~~~----~~~~~~~~~~~~~a~----gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~ 101 (690)
T 3k30_A 30 YQVPHCNGMGY----RDPSAQASMRKIKAE----GGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEG 101 (690)
T ss_dssp EECCCCCSCSS----SCHHHHHHHHHHHHH----TTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHHT
T ss_pred EeCCCcCCCCC----CChHHHHHHHHHHhc----cCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHhc
Q ss_pred Ccccccceeee---------------cCCCceeecC--------------------chHHHhhhHHhhhhhhhhcccccC
Q 024544 207 GITIPAWFSFN---------------SKDGINVVSG--------------------DSILECASIADSCEQVVAVGINCT 251 (266)
Q Consensus 207 ~~~~Pv~iSf~---------------~~~~~~l~~G--------------------~~~~~a~~~~~~~~~~~avGiNC~ 251 (266)
+ .|+++.+. +.++..-..+ ..+.+|+..+.+ .+.++|=|||+
T Consensus 102 g--~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~-aGfDgVeih~a 178 (690)
T 3k30_A 102 G--GLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIE-AGYDIVYVYGA 178 (690)
T ss_dssp T--CEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHH-HTCSEEEEEEC
T ss_pred C--CEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccc
Q ss_pred Ccc-hhhhhheeeee
Q 024544 252 SPR-FIHGLILSVRK 265 (266)
Q Consensus 252 ~p~-~~~~~l~~l~~ 265 (266)
++. .+.++|....|
T Consensus 179 ~gy~L~~qFlsp~~N 193 (690)
T 3k30_A 179 HGYSGVHHFLSKRYN 193 (690)
T ss_dssp TTCSHHHHHHCTTTC
T ss_pred ccchHHHHhCCCccC
No 305
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=29.70 E-value=1.8e+02 Score=26.28 Aligned_cols=32 Identities=9% Similarity=-0.223 Sum_probs=23.2
Q ss_pred CCCeEEeeccchhhhHHHHHHHHhhcCcccccce
Q 024544 181 GADLIAFETIPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 181 gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
|+|+---|.-........+++.+|+.+ +|+.+
T Consensus 184 G~dL~g~E~~~p~~~f~~~f~~ar~~G--l~~t~ 215 (380)
T 4gxw_A 184 GIGIDYRENDRPPELFWKAYRDARAAG--FRTTA 215 (380)
T ss_dssp EEEEESCCTTCCGGGGHHHHHHHHHTT--CEEEE
T ss_pred EEeecCCCCCCCHHHHHHHHHHHHHcC--CCeee
Confidence 568888887766777778888888865 55543
No 306
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis}
Probab=29.61 E-value=44 Score=30.22 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=24.2
Q ss_pred ccccCchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHH
Q 024544 49 CLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (266)
Q Consensus 49 ~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~ 94 (266)
+.++.|+ ++.++ |-+.|||++.|-= +..+++.|++.+.+
T Consensus 63 LDLk~~~---~~l~~-Lv~~ADVvienfr---PG~~~rlGl~ye~L 101 (359)
T 2g04_A 63 LDVKTQP---QAMLE-LAAKADVLLDCFR---PGTCERLGIGPDDC 101 (359)
T ss_dssp CCC---C---CTTHH-HHTTCSEEEECSC---TTHHHHSSCSHHHH
T ss_pred eeCCCHH---HHHHH-HHHhCCEEEeCCC---ccHHHHhCCCHHHH
Confidence 3567787 55554 3456999999864 55677789986543
No 307
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=29.38 E-value=61 Score=28.70 Aligned_cols=46 Identities=9% Similarity=0.081 Sum_probs=32.2
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+++..++++|.++| +| --.+++|++.+++++++.+ +++++.+.
T Consensus 100 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~l~v~~~ 147 (361)
T 3u3x_A 100 ERAELAIRAMQHGKDVL-VDKPGMTSFDQLAKLRRVQAETG--RIFSILYS 147 (361)
T ss_dssp HHHHHHHHHHHTTCEEE-EESCSCSSHHHHHHHHHHHHTTC--CCEEEECH
T ss_pred HHHHHHHHHHHCCCeEE-EeCCCCCCHHHHHHHHHHHHHcC--CEEEEech
Confidence 57777777888887655 47 3456788888888887754 56666554
No 308
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=29.06 E-value=1.4e+02 Score=26.11 Aligned_cols=62 Identities=15% Similarity=0.253 Sum_probs=37.8
Q ss_pred ceEEEEecccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeec---------cchhhhHHHHH---
Q 024544 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---------IPNKLEAKAYA--- 200 (266)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET---------~~~~~E~~a~~--- 200 (266)
+.+|.|=+--+.+.+.||..| .+.+++.+ +++.+++.|+|+|=+-- ++.-+|++.++
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI 107 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSY-------NEVDAAVR----HAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMI 107 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBH-------HHHHHHHH----HHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccCCcc-------CCHHHHHH----HHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 456777776666666665332 24444444 56677789999996653 23367776666
Q ss_pred HHHhh
Q 024544 201 ELLEE 205 (266)
Q Consensus 201 ~a~~~ 205 (266)
+++++
T Consensus 108 ~~l~~ 112 (297)
T 1tx2_A 108 QAVSK 112 (297)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44444
No 309
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=29.00 E-value=72 Score=28.35 Aligned_cols=48 Identities=15% Similarity=-0.009 Sum_probs=32.5
Q ss_pred hhhHHhhhcCCCeEEeeccchh---hhHHHHHHHHhhcCcccccceeeecCCC
Q 024544 172 RRVLILANSGADLIAFETIPNK---LEAKAYAELLEEEGITIPAWFSFNSKDG 221 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~---~E~~a~~~a~~~~~~~~Pv~iSf~~~~~ 221 (266)
..++++++.|++.|++|++..- .++..+++.+.+. ++||+++-.|..+
T Consensus 226 ~~l~~~~~~g~~GiVl~~~G~Gn~p~~~~~~l~~a~~~--gi~VV~~Sr~~~G 276 (326)
T 1nns_A 226 LPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKT--GTAVVRSSRVPTG 276 (326)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHT--TCEEEEEESSSSS
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHC--CCEEEEECCCCCC
Confidence 3567788889999999998652 3444444433333 4899988887654
No 310
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=29.00 E-value=57 Score=28.44 Aligned_cols=40 Identities=5% Similarity=-0.008 Sum_probs=29.0
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccc
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIP 211 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~P 211 (266)
.|.+++..++++|.+++ +| --.+++|++.+++++++.+ ++
T Consensus 79 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~ 120 (337)
T 3ip3_A 79 LNGKILLEALERKIHAF-VEKPIATTFEDLEKIRSVYQKVR--NE 120 (337)
T ss_dssp HHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT--TT
T ss_pred hHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHhC--Cc
Confidence 57777787888888754 57 3456778888888888765 55
No 311
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=28.88 E-value=3.3e+02 Score=24.72 Aligned_cols=80 Identities=11% Similarity=0.095 Sum_probs=43.0
Q ss_pred HHHhhhhhHHhhhcCCCe--E--Eeeccc------hhhh----HHHHHHHHhhcCcccccceeeecCCCceeecCchHHH
Q 024544 167 KEFHRRRVLILANSGADL--I--AFETIP------NKLE----AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILE 232 (266)
Q Consensus 167 ~~~~~~qi~~l~~~gvD~--i--~~ET~~------~~~E----~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~ 232 (266)
+++-+..++.|.+.|++. + ..|+-. +... ++++.+++|+..++.+|++.++...+ -..+..
T Consensus 140 ~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~-----~~~~~~ 214 (399)
T 1ur4_A 140 YQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPET-----SGRYAW 214 (399)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTS-----TTHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcc-----hHHHHH
Confidence 344456677787777654 3 235332 1222 34556778887667778777653221 112222
Q ss_pred hhhHHhh-hhhhhhcccccC
Q 024544 233 CASIADS-CEQVVAVGINCT 251 (266)
Q Consensus 233 a~~~~~~-~~~~~avGiNC~ 251 (266)
.+..+.. ....+.||+|+=
T Consensus 215 ~~d~l~~~g~d~DvIG~syY 234 (399)
T 1ur4_A 215 IAETLHRHHVDYDVFASSYY 234 (399)
T ss_dssp HHHHHHHTTCCCSEEEEEEC
T ss_pred HHHHHHHcCCCcCeEeEecC
Confidence 2333322 235788999974
No 312
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=28.77 E-value=98 Score=27.83 Aligned_cols=89 Identities=13% Similarity=0.075 Sum_probs=49.6
Q ss_pred HHHHHHHhhhhhHHhhhcCCCeEEeeccchh----hhH-HHHHHHHhhcCcccccceee-ecCCCc---------eeecC
Q 024544 163 LETLKEFHRRRVLILANSGADLIAFETIPNK----LEA-KAYAELLEEEGITIPAWFSF-NSKDGI---------NVVSG 227 (266)
Q Consensus 163 ~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~----~E~-~a~~~a~~~~~~~~Pv~iSf-~~~~~~---------~l~~G 227 (266)
..++...|++-++.|.++|+|+|-+-- |.+ .+. ..++++++..-.++|.-+.+ .|..++ ...+.
T Consensus 166 ~~dlA~a~~~ei~~l~~aG~~~IQiDe-P~l~~~~~~~~~~~v~~~n~~~~~~~~~~~iHiC~G~~~~~n~d~~~t~~~~ 244 (357)
T 3rpd_A 166 AWEFAKILNEEAKELEAAGVDIIQFDE-PAFNVFFDEVNDWGIACLERAIEGLKCETAVHICYGYGIKANTDWKKTLGSE 244 (357)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEC-GGGGTCHHHHHHTHHHHHHHHHTTCCSEEEEEECSCCSSHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecC-ccccccHHHHHHHHHHHHHHHHhCCCCceEEEEecCCccCCccccccccccc
Confidence 567888999999999999999886542 222 221 23445555431134433322 232211 00000
Q ss_pred -chHHHhhhHHhhhhhhhhcccccCCc
Q 024544 228 -DSILECASIADSCEQVVAVGINCTSP 253 (266)
Q Consensus 228 -~~~~~a~~~~~~~~~~~avGiNC~~p 253 (266)
-...+.+..+.+ .+++++.+-+..+
T Consensus 245 ~g~y~~i~~~l~~-~~~D~i~lE~~~~ 270 (357)
T 3rpd_A 245 WRQYEEVFPKLQK-SNIDIISLECHNS 270 (357)
T ss_dssp CCGGGGTHHHHHH-SSCCEEEECCTTC
T ss_pred cCcHHHHHHHHHh-CCCCEEEEEecCC
Confidence 134566666655 5788888888653
No 313
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=28.76 E-value=1.4e+02 Score=26.78 Aligned_cols=71 Identities=11% Similarity=0.018 Sum_probs=42.1
Q ss_pred hhhhHHhhhcCCC-eEEeec-----------cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 171 RRRVLILANSGAD-LIAFET-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 171 ~~qi~~l~~~gvD-~i~~ET-----------~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
.+-++.+.++|+| .|-+-- ..+.+.+..+++++++.- ++|+++-++.. .++.+.+..+.
T Consensus 144 ~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~-~~PV~vKi~p~--------~~~~~~a~~~~ 214 (345)
T 3oix_A 144 HTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYF-TKPLGIKLPPY--------FDIVHFDQAAA 214 (345)
T ss_dssp HHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCC--------CCHHHHHHHHH
T ss_pred HHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHh-CCCeEEEECCC--------CCHHHHHHHHH
Confidence 3344555556765 665542 135566778888888753 68999888642 24556655555
Q ss_pred hhhhhhh-cccccC
Q 024544 239 SCEQVVA-VGINCT 251 (266)
Q Consensus 239 ~~~~~~a-vGiNC~ 251 (266)
. .+.++ .++|++
T Consensus 215 ~-aga~~i~~int~ 227 (345)
T 3oix_A 215 I-FNXYPLTFVNCI 227 (345)
T ss_dssp H-HTTSCCSEEEEC
T ss_pred H-hCCCceEEEEee
Confidence 4 24443 356665
No 314
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=28.63 E-value=98 Score=29.21 Aligned_cols=44 Identities=11% Similarity=0.065 Sum_probs=30.1
Q ss_pred hhhhHHhhhcCCCeEEeecc-chhhhHHHHHHHHhhcCcccccce
Q 024544 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
.+++++|.++|+|.+.+-+- ++...+...++.+++..+++|+++
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~ 302 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIA 302 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEe
Confidence 34678889999999998643 344555556666666533578775
No 315
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=28.58 E-value=68 Score=22.58 Aligned_cols=38 Identities=16% Similarity=0.122 Sum_probs=24.2
Q ss_pred hhcCCCeEEeec-cchhhhHHHHHHHHhhc--Ccccccceee
Q 024544 178 ANSGADLIAFET-IPNKLEAKAYAELLEEE--GITIPAWFSF 216 (266)
Q Consensus 178 ~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~--~~~~Pv~iSf 216 (266)
.+..+|++++.. +|.. +...+++.+++. .+..|+++--
T Consensus 44 ~~~~~dlii~D~~l~~~-~g~~~~~~l~~~~~~~~~~ii~~s 84 (127)
T 3i42_A 44 STRGYDAVFIDLNLPDT-SGLALVKQLRALPMEKTSKFVAVS 84 (127)
T ss_dssp HHSCCSEEEEESBCSSS-BHHHHHHHHHHSCCSSCCEEEEEE
T ss_pred HhcCCCEEEEeCCCCCC-CHHHHHHHHHhhhccCCCCEEEEE
Confidence 345699999985 4544 455666677765 3457766433
No 316
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=28.45 E-value=1.6e+02 Score=25.33 Aligned_cols=74 Identities=12% Similarity=0.070 Sum_probs=44.0
Q ss_pred chhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHh
Q 024544 160 AVSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (266)
Q Consensus 160 ~~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a 233 (266)
.+|.+.+ +.+++.+++.|||.|++ |. .-+.+|=+.+++.+.+...+ |++.. .+.+..++
T Consensus 15 ~iD~~~l----~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gv---------g~~~t~~a 79 (286)
T 2r91_A 15 RLDPELF----ANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQV---------ASLNADEA 79 (286)
T ss_dssp EECHHHH----HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEEC---------CCSSHHHH
T ss_pred ccCHHHH----HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEee---------CCCCHHHH
Confidence 3666554 44678888899999875 31 22455767788777664323 44333 23456777
Q ss_pred hhHHhhh--hhhhhccc
Q 024544 234 ASIADSC--EQVVAVGI 248 (266)
Q Consensus 234 ~~~~~~~--~~~~avGi 248 (266)
++..+.. .+++++.+
T Consensus 80 i~la~~A~~~Gadavlv 96 (286)
T 2r91_A 80 IALAKYAESRGAEAVAS 96 (286)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEE
Confidence 7665532 45665554
No 317
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=28.43 E-value=55 Score=28.54 Aligned_cols=46 Identities=17% Similarity=0.189 Sum_probs=28.5
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+++...+++|.+++ +| --.++.|++.+++++++.+ +++++.+.
T Consensus 85 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~v~~~ 132 (318)
T 3oa2_A 85 LHYPHIAAGLRLGCDVI-CEKPLVPTPEMLDQLAVIERETD--KRLYNILQ 132 (318)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSSCCSCHHHHHHHHHHHHHHT--CCEEECCG
T ss_pred HHHHHHHHHHHCCCeEE-EECCCcCCHHHHHHHHHHHHHhC--CEEEEEEh
Confidence 35666666667776644 46 2456777777777777654 55555553
No 318
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=28.42 E-value=2.4e+02 Score=24.59 Aligned_cols=82 Identities=11% Similarity=-0.020 Sum_probs=43.0
Q ss_pred hHHhhhcCCCeEEeeccc--------------hhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhh
Q 024544 174 VLILANSGADLIAFETIP--------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~ 239 (266)
++.+.++|++.+-+|--. ...|...-++++++...+.++.|.-..+.. ...| ++++++....
T Consensus 100 v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~--~~~g--l~~ai~ra~a 175 (295)
T 1xg4_A 100 VKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDAL--AVEG--LDAAIERAQA 175 (295)
T ss_dssp HHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCH--HHHC--HHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHh--hhcC--HHHHHHHHHH
Confidence 455667899999999653 223444444455443323455555433221 1122 4555554332
Q ss_pred --hhhhhhcccccCC-cchhhhh
Q 024544 240 --CEQVVAVGINCTS-PRFIHGL 259 (266)
Q Consensus 240 --~~~~~avGiNC~~-p~~~~~~ 259 (266)
..|+++|=+-|.. ++.+..+
T Consensus 176 y~eAGAd~i~~e~~~~~~~~~~i 198 (295)
T 1xg4_A 176 YVEAGAEMLFPEAITELAMYRQF 198 (295)
T ss_dssp HHHTTCSEEEETTCCSHHHHHHH
T ss_pred HHHcCCCEEEEeCCCCHHHHHHH
Confidence 2467777777763 3444443
No 319
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=28.41 E-value=2.9e+02 Score=23.94 Aligned_cols=66 Identities=21% Similarity=0.245 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccccceEEEEecccccceecCCCccccCCCCchhHHHHHHHhh
Q 024544 92 EEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHR 171 (266)
Q Consensus 92 ~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~ 171 (266)
.+..++.+..++.+.+.+.. .+...+|.|.+|. |. |+. +.+++.+.++
T Consensus 190 ~~~~~~l~~rir~vL~iA~~------------------~g~~~LVLGA~GC-Gv-----------fgn--pp~~VA~~~~ 237 (277)
T 3sig_A 190 EEIGRVLRGRAAKVLAAARH------------------HGHRRLVLGAWGC-GV-----------FGN--DPAQVAETFA 237 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHH------------------TTCCEEEECCTTS-ST-----------TCC--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH------------------cCCCEEEECCccc-Cc-----------CCC--CHHHHHHHHH
Confidence 45667777777777766654 3567899999995 55 543 5678888887
Q ss_pred hhhHH---hhhcCCCeEEeecc
Q 024544 172 RRVLI---LANSGADLIAFETI 190 (266)
Q Consensus 172 ~qi~~---l~~~gvD~i~~ET~ 190 (266)
+.+.. +. ...+-|+|=-+
T Consensus 238 ~vL~~~~~f~-~~f~~VvFAv~ 258 (277)
T 3sig_A 238 GLLLDGGPFA-GRFAHVVFAVW 258 (277)
T ss_dssp HHHSTTCTTT-TTCSEEEEECC
T ss_pred HHHhhcchhc-CCceEEEEEEe
Confidence 66552 22 24555555433
No 320
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A*
Probab=28.32 E-value=60 Score=30.12 Aligned_cols=40 Identities=15% Similarity=0.104 Sum_probs=21.7
Q ss_pred ccccCchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHH
Q 024544 49 CLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEE 93 (266)
Q Consensus 49 ~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~ 93 (266)
+.++.|+-...+++ |-+.|||+++|-= +..+++.|++.+.
T Consensus 74 LDLk~~eGr~~l~~--Lv~~ADVlienfr---PGv~~rlGL~ye~ 113 (428)
T 1q7e_A 74 LNTKTAEGKEVMEK--LIREADILVENFH---PGAIDHMGFTWEH 113 (428)
T ss_dssp CCTTSHHHHHHHHH--HHHHCSEEEECCC---C-------CCHHH
T ss_pred eeCCCHHHHHHHHH--HHhhCCEEEEcCC---cchHhhcCCCHHH
Confidence 35677775554444 4456999999864 5567777998654
No 321
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=28.22 E-value=59 Score=29.20 Aligned_cols=45 Identities=18% Similarity=0.298 Sum_probs=29.2
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceee
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.|.+++...+++|.++| +| --.+++|++.+++++++.+ +.+++.+
T Consensus 108 ~H~~~~~~al~aGkhVl-~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~ 154 (412)
T 4gqa_A 108 LHYTMAMAAIAAGKHVY-CEKPLAVNEQQAQEMAQAARRAG--VKTMVAF 154 (412)
T ss_dssp GHHHHHHHHHHTTCEEE-EESCSCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHcCCCeE-eecCCcCCHHHHHHHHHHHHHhC--Ceeeecc
Confidence 56677777777887654 47 3456778888877777654 4444444
No 322
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=28.21 E-value=1.4e+02 Score=22.51 Aligned_cols=43 Identities=19% Similarity=0.229 Sum_probs=26.2
Q ss_pred HHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCc-ccccceeee
Q 024544 175 LILANSGADLIAFET--IPNKLEAKAYAELLEEEGI-TIPAWFSFN 217 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~-~~Pv~iSf~ 217 (266)
++..+.++|++.+=. -++...++.+++.+++.+. +.|+|+.-.
T Consensus 48 ~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 48 KAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp HHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred HHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 334456788887653 2344456677777777653 467776653
No 323
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=28.15 E-value=1e+02 Score=25.41 Aligned_cols=30 Identities=30% Similarity=0.340 Sum_probs=18.9
Q ss_pred hHHhhhcCCCeEEeeccc------hhhhHHHHHHHH
Q 024544 174 VLILANSGADLIAFETIP------NKLEAKAYAELL 203 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~------~~~E~~a~~~a~ 203 (266)
++...++|+|++-|--++ ++++++.+.+.+
T Consensus 14 a~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~ 49 (203)
T 1v5x_A 14 ALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEAL 49 (203)
T ss_dssp HHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHS
T ss_pred HHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhC
Confidence 455667899999888544 344455554433
No 324
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=27.91 E-value=53 Score=28.65 Aligned_cols=45 Identities=11% Similarity=0.095 Sum_probs=26.2
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceee
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.|.+++...+++|..+| +| --.+++|++.+++++++.+ +++++.+
T Consensus 98 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~~--~~l~v~~ 144 (350)
T 4had_A 98 QHIEWSIKAADAGKHVV-CEKPLALKAGDIDAVIAARDRNK--VVVTEAY 144 (350)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSCCCSSGGGGHHHHHHHHHHT--CCEEECC
T ss_pred hhHHHHHHHHhcCCEEE-EeCCcccchhhHHHHHHHHHHcC--CceeEee
Confidence 46666666667776544 36 2345667777777666644 4444444
No 325
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=27.86 E-value=83 Score=26.87 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=23.9
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEee
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFE 188 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~E 188 (266)
.+.+++.++..+.++.|.+.|+|+|++=
T Consensus 54 ~s~~~i~~~~~~~~~~L~~~g~d~ivia 81 (273)
T 2oho_A 54 RPKKQIKEYTWELVNFLLTQNVKMIVFA 81 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 4668888888888999999999999985
No 326
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=27.85 E-value=62 Score=27.87 Aligned_cols=44 Identities=11% Similarity=0.058 Sum_probs=31.2
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+..++..+.+.++|.|++=. +..++..+++.+++.+...|+ +++
T Consensus 185 ~~~~~~~l~~~~~d~v~~~~--~~~~a~~~~~~~~~~g~~~~~-i~~ 228 (364)
T 3lop_A 185 VGPAVDKLLAADVQAIFLGA--TAEPAAQFVRQYRARGGEAQL-LGL 228 (364)
T ss_dssp CHHHHHHHHHSCCSEEEEES--CHHHHHHHHHHHHHTTCCCEE-EEC
T ss_pred HHHHHHHHHhCCCCEEEEec--CcHHHHHHHHHHHHcCCCCeE-EEe
Confidence 34456667778999998733 455788888999988766773 444
No 327
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=27.65 E-value=60 Score=23.89 Aligned_cols=37 Identities=5% Similarity=0.014 Sum_probs=23.4
Q ss_pred hcCCCeEEeeccchhhhHHHHHHHHhhcCccccccee
Q 024544 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 179 ~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
+..+|++++.....-.+...+++.+++..+..|+++-
T Consensus 59 ~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~ 95 (152)
T 3eul_A 59 AHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLI 95 (152)
T ss_dssp HHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEE
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEE
Confidence 4568999998543333455666667765556776543
No 328
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=27.50 E-value=1.4e+02 Score=28.62 Aligned_cols=51 Identities=16% Similarity=0.204 Sum_probs=37.4
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
++..+..+ ++..++.|||+|.+=-+.+.++++.+.+++++.+.+.+++.-+
T Consensus 240 lTekD~~d-----l~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKI 290 (550)
T 3gr4_A 240 VSEKDIQD-----LKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKI 290 (550)
T ss_dssp SCHHHHHH-----HHHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEE
T ss_pred CCHHHHHH-----HHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEe
Confidence 45555444 4555678999999999999999999999998766445555433
No 329
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=27.49 E-value=67 Score=32.51 Aligned_cols=72 Identities=13% Similarity=0.137 Sum_probs=50.9
Q ss_pred chhHHHHHHHhhhhhHHhh-hcCCCeEEee---ccchhhh-H---HHHHHHHhhc-----CcccccceeeecCCCceeec
Q 024544 160 AVSLETLKEFHRRRVLILA-NSGADLIAFE---TIPNKLE-A---KAYAELLEEE-----GITIPAWFSFNSKDGINVVS 226 (266)
Q Consensus 160 ~~~~~e~~~~~~~qi~~l~-~~gvD~i~~E---T~~~~~E-~---~a~~~a~~~~-----~~~~Pv~iSf~~~~~~~l~~ 226 (266)
..+.+..+++.+.-++.+. +..|+.+++- -|...++ + +.+++++++. ..++|++|-+ .
T Consensus 310 ga~~e~v~~~~~~~l~ii~~d~~vk~ilvNIfGGI~~cd~VA~tf~GIi~A~k~~~~~~~~~~vPiVVRl---------~ 380 (829)
T 3pff_A 310 APSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRR---------G 380 (829)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSCCTTCEEEEECBCBCSSCCHHHHHHHHHHHHHHHHHHHHHTTEEEEEEC---------B
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCccchHHHHHHHhHHHHHHHHhhhhcccCCceEEEEC---------C
Confidence 3577888888777777654 4678877654 4455555 3 6788999875 2368988776 6
Q ss_pred CchHHHhhhHHhhh
Q 024544 227 GDSILECASIADSC 240 (266)
Q Consensus 227 G~~~~~a~~~~~~~ 240 (266)
|+..++..+.+++.
T Consensus 381 GtN~eeg~~il~~~ 394 (829)
T 3pff_A 381 GPNYQEGLRVMGEV 394 (829)
T ss_dssp STTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhC
Confidence 99999888887753
No 330
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=27.48 E-value=85 Score=28.84 Aligned_cols=41 Identities=22% Similarity=0.186 Sum_probs=24.5
Q ss_pred hHHhhhcCCCeEEee-------c--------cchhhhHHHHHHHHhhcCcccccceee
Q 024544 174 VLILANSGADLIAFE-------T--------IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 174 i~~l~~~gvD~i~~E-------T--------~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
++.+.++|+|+|.+- | .|.+.-+..+.+++++. ++||+.+-
T Consensus 198 A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~--~IPVIA~G 253 (400)
T 3ffs_A 198 TKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKF--GIPIIADG 253 (400)
T ss_dssp HHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTT--TCCEEEES
T ss_pred HHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhc--CCCEEecC
Confidence 355667899999882 1 34444444444555443 48888654
No 331
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=27.40 E-value=71 Score=27.48 Aligned_cols=45 Identities=24% Similarity=0.316 Sum_probs=30.7
Q ss_pred hhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceeee
Q 024544 170 HRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
|.+.+..++++|..++ +|. -.+..|++.+++++++.+ +++++.+.
T Consensus 78 h~~~~~~al~~G~~v~-~eKP~~~~~~~~~~l~~~a~~~g--~~~~~~~~ 124 (319)
T 1tlt_A 78 HFDVVSTLLNAGVHVC-VDKPLAENLRDAERLVELAARKK--LTLMVGFN 124 (319)
T ss_dssp HHHHHHHHHHTTCEEE-EESSSCSSHHHHHHHHHHHHHTT--CCEEEECG
T ss_pred HHHHHHHHHHcCCeEE-EeCCCCCCHHHHHHHHHHHHHcC--CeEEEeee
Confidence 5556666777888765 583 357889999998888755 55555543
No 332
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=27.38 E-value=55 Score=28.79 Aligned_cols=26 Identities=12% Similarity=-0.028 Sum_probs=19.0
Q ss_pred CchhHHHHhhhhhhccccEEEechhh
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQ 78 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~ 78 (266)
..+...++-+.-.++|.+.|+.-.|.
T Consensus 26 ~~e~k~~i~~~L~~~Gv~~IE~g~~~ 51 (307)
T 1ydo_A 26 ATEDKITWINQLSRTGLSYIEITSFV 51 (307)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEEECS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 34555666667788999999997653
No 333
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=27.36 E-value=1.1e+02 Score=26.25 Aligned_cols=69 Identities=12% Similarity=0.139 Sum_probs=39.7
Q ss_pred HhhhcCCCeEEeeccchhh-------------------------hHHHHHHHHhhc-C-cccccceeeecCCCceeecCc
Q 024544 176 ILANSGADLIAFETIPNKL-------------------------EAKAYAELLEEE-G-ITIPAWFSFNSKDGINVVSGD 228 (266)
Q Consensus 176 ~l~~~gvD~i~~ET~~~~~-------------------------E~~a~~~a~~~~-~-~~~Pv~iSf~~~~~~~l~~G~ 228 (266)
.+.+.|+.++..+|++... .....++-++.. . .+.|+++++. |.
T Consensus 33 ~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~---------g~ 103 (314)
T 2e6f_A 33 CMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSIS---------GL 103 (314)
T ss_dssp HHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEEC---------CS
T ss_pred HHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeC---------CC
Confidence 3466788888877754321 122333333332 1 2588888874 33
Q ss_pred hHH---HhhhHHhhhhhhh---hcccccCCcc
Q 024544 229 SIL---ECASIADSCEQVV---AVGINCTSPR 254 (266)
Q Consensus 229 ~~~---~a~~~~~~~~~~~---avGiNC~~p~ 254 (266)
+++ +++..+.+ .+++ +|=+|+++|.
T Consensus 104 ~~~~~~~~a~~~~~-~g~d~~~~iein~~~P~ 134 (314)
T 2e6f_A 104 SVEENVAMVRRLAP-VAQEKGVLLELNLSCPN 134 (314)
T ss_dssp SHHHHHHHHHHHHH-HHHHHCCEEEEECCCCC
T ss_pred CHHHHHHHHHHHHH-hCCCcCceEEEEcCCCC
Confidence 444 44444444 4778 7999998664
No 334
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=27.31 E-value=42 Score=27.10 Aligned_cols=44 Identities=14% Similarity=0.024 Sum_probs=29.3
Q ss_pred hHHhhhcCCCeEEeeccch-hhhHHHHHHHHhhcCcccccceeeecC
Q 024544 174 VLILANSGADLIAFETIPN-KLEAKAYAELLEEEGITIPAWFSFNSK 219 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~-~~E~~a~~~a~~~~~~~~Pv~iSf~~~ 219 (266)
++.+. .|+|+|-+-+ |. +.....+++.+|+..+++|+.+.+.+.
T Consensus 19 ~~~~~-~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~ 63 (211)
T 3f4w_A 19 MDKVV-DDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLADAKIM 63 (211)
T ss_dssp HHHHG-GGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEEEEEEC
T ss_pred HHHhh-cCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEEEEEec
Confidence 44454 5899987665 65 666677788887753368887766554
No 335
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=27.28 E-value=62 Score=28.51 Aligned_cols=46 Identities=15% Similarity=0.185 Sum_probs=31.4
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+.+..++++|..+ ++| .-.+++|++.+++++++.+ +++++.+.
T Consensus 101 ~h~~~~~~al~aGk~V-l~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~~ 148 (350)
T 3rc1_A 101 LHAEWIDRALRAGKHV-LAEKPLTTDRPQAERLFAVARERG--LLLMENFM 148 (350)
T ss_dssp GHHHHHHHHHHTTCEE-EEESSSCSSHHHHHHHHHHHHHTT--CCEEEECG
T ss_pred HHHHHHHHHHHCCCcE-EEeCCCCCCHHHHHHHHHHHHHhC--CEEEEEec
Confidence 3566667777888874 467 2447888888888888755 55555553
No 336
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=27.17 E-value=66 Score=22.76 Aligned_cols=38 Identities=16% Similarity=0.244 Sum_probs=21.6
Q ss_pred hhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccce
Q 024544 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
+.+..+|+++++....-.....+++.+++..+..|+++
T Consensus 47 l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 84 (130)
T 3eod_A 47 LGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLV 84 (130)
T ss_dssp HTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEE
T ss_pred HhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEE
Confidence 34456899999854323344555666666555677654
No 337
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=26.97 E-value=3.2e+02 Score=23.96 Aligned_cols=83 Identities=7% Similarity=-0.031 Sum_probs=49.1
Q ss_pred hhHHhhhcCCCeEEeeccc--------------hhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHh
Q 024544 173 RVLILANSGADLIAFETIP--------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~ 238 (266)
-++.+.++||+.+-+|-.. +.+|...-++++++.+ .+++|.-..+.. . ...++++++...
T Consensus 109 ~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~--~~~~I~ARtda~--~--~~g~~~ai~Ra~ 182 (305)
T 3ih1_A 109 TAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA--PSLYIVARTDAR--G--VEGLDEAIERAN 182 (305)
T ss_dssp HHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC--TTSEEEEEECCH--H--HHCHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcC--CCeEEEEeeccc--c--ccCHHHHHHHHH
Confidence 3677788999999999653 2346666666666654 566655543321 1 122566665443
Q ss_pred h--hhhhhhcccccCC-cchhhhhhe
Q 024544 239 S--CEQVVAVGINCTS-PRFIHGLIL 261 (266)
Q Consensus 239 ~--~~~~~avGiNC~~-p~~~~~~l~ 261 (266)
. ..|+++|=+-|.. ++.+..+.+
T Consensus 183 ay~eAGAD~i~~e~~~~~~~~~~i~~ 208 (305)
T 3ih1_A 183 AYVKAGADAIFPEALQSEEEFRLFNS 208 (305)
T ss_dssp HHHHHTCSEEEETTCCSHHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCCCHHHHHHHHH
Confidence 2 2467777777764 455555443
No 338
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=26.97 E-value=64 Score=28.40 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=32.7
Q ss_pred HhhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceee
Q 024544 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.|.+.+..++++|..++. |. -.+.+|++.+++++++.+ +++++.+
T Consensus 83 ~h~~~~~~al~aGk~V~~-EKP~a~~~~e~~~l~~~a~~~g--~~~~~~~ 129 (362)
T 1ydw_A 83 LHVEWAIKAAEKGKHILL-EKPVAMNVTEFDKIVDACEANG--VQIMDGT 129 (362)
T ss_dssp GHHHHHHHHHTTTCEEEE-CSSCSSSHHHHHHHHHHHHTTT--CCEEECC
T ss_pred HHHHHHHHHHHCCCeEEE-ecCCcCCHHHHHHHHHHHHHcC--CEEEEEE
Confidence 356667777888987664 84 557889999999988865 5665554
No 339
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=26.96 E-value=1.4e+02 Score=26.10 Aligned_cols=74 Identities=11% Similarity=-0.006 Sum_probs=42.6
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhcccccCCc
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP 253 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC~~p 253 (266)
+.+..++|.-.++.-.+.+.++++..++.+++.. +.|+-+.+.+.+ ....+.+..+.. .+++.|-++...|
T Consensus 43 a~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~-~~p~gVnl~~~~-------~~~~~~~~~~~~-~g~d~V~l~~g~p 113 (326)
T 3bo9_A 43 AAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKT-DKPFGVNIILVS-------PWADDLVKVCIE-EKVPVVTFGAGNP 113 (326)
T ss_dssp HHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTC-SSCEEEEEETTS-------TTHHHHHHHHHH-TTCSEEEEESSCC
T ss_pred HHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhc-CCCEEEEEeccC-------CCHHHHHHHHHH-CCCCEEEECCCCc
Confidence 3444556655455455556777777777777643 478887776521 123455555444 4666666666555
Q ss_pred chh
Q 024544 254 RFI 256 (266)
Q Consensus 254 ~~~ 256 (266)
..+
T Consensus 114 ~~~ 116 (326)
T 3bo9_A 114 TKY 116 (326)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 340
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=26.90 E-value=84 Score=28.95 Aligned_cols=69 Identities=16% Similarity=0.086 Sum_probs=39.8
Q ss_pred hcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCC---------Cce--eecCchHHHhhhHHh---hhhhhh
Q 024544 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD---------GIN--VVSGDSILECASIAD---SCEQVV 244 (266)
Q Consensus 179 ~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~---------~~~--l~~G~~~~~a~~~~~---~~~~~~ 244 (266)
+.|+..+.++ +..|++.+.+++++.+...+|++-+.... .|. -+-|-+.+++...+. ...++.
T Consensus 138 ~~gv~~~~vd---s~~el~~l~~~a~~~~~~~~V~lRVn~~~~~~~~~~i~tG~~~sRfGi~~~e~~~ll~~~~~~~~l~ 214 (443)
T 3vab_A 138 EAGIYCFNVE---SEPELEILSARAVAAGKVAPVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLN 214 (443)
T ss_dssp HHTCSEEEEC---CHHHHHHHHHHHHHHTCCEEEEEEEECCBCTTTCCBC---CCCCSSSEEGGGHHHHHHHHHHSTTEE
T ss_pred HCCCCEEEEC---CHHHHHHHHHHHHhcCCCceEEEEECCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHhhCCCce
Confidence 4577755544 67777777777776554577888775431 111 345766666655443 223455
Q ss_pred hccccc
Q 024544 245 AVGINC 250 (266)
Q Consensus 245 avGiNC 250 (266)
..|+-|
T Consensus 215 l~Glh~ 220 (443)
T 3vab_A 215 VVGIDM 220 (443)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 566655
No 341
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=26.90 E-value=69 Score=25.89 Aligned_cols=40 Identities=20% Similarity=0.280 Sum_probs=27.1
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
++.+.+.|+|.+.+=..+. ++...+++.+++.+ .++++++
T Consensus 77 i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~ 116 (220)
T 2fli_A 77 VEAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVI 116 (220)
T ss_dssp HHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEE
T ss_pred HHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEE
Confidence 5667788999998744443 45556667777654 5677776
No 342
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=26.84 E-value=83 Score=24.04 Aligned_cols=57 Identities=18% Similarity=0.297 Sum_probs=34.7
Q ss_pred CCCeEEeeccchhhhHHHHHHHHhhcCcccc-cceeeecCCCceeecCchHHHhhhHHhhhhhhhhcccccCC
Q 024544 181 GADLIAFETIPNKLEAKAYAELLEEEGITIP-AWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (266)
Q Consensus 181 gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~P-v~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC~~ 252 (266)
.+|++++= +|. ..+..+++.+-+.+ ++ +|++ .|..-.++++.+++ .++..+|=||.+
T Consensus 77 ~vDlvvi~-vp~-~~~~~vv~~~~~~g--i~~i~~~----------~g~~~~~l~~~a~~-~Gi~vvGpnc~g 134 (144)
T 2d59_A 77 KIEVVDLF-VKP-KLTMEYVEQAIKKG--AKVVWFQ----------YNTYNREASKKADE-AGLIIVANRCMM 134 (144)
T ss_dssp CCSEEEEC-SCH-HHHHHHHHHHHHHT--CSEEEEC----------TTCCCHHHHHHHHH-TTCEEEESCCHH
T ss_pred CCCEEEEE-eCH-HHHHHHHHHHHHcC--CCEEEEC----------CCchHHHHHHHHHH-cCCEEEcCCchh
Confidence 69998874 555 56666666555545 33 3432 12223455555554 578899999975
No 343
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=26.81 E-value=79 Score=27.16 Aligned_cols=24 Identities=25% Similarity=0.213 Sum_probs=16.0
Q ss_pred HHHhhhhhhccccEEEechhhhhh
Q 024544 58 RKVHLDYLDAGANIIITASYQATI 81 (266)
Q Consensus 58 ~~iH~~Yl~AGAdiI~TnTy~a~~ 81 (266)
.++-+...++|||.|..+++.++.
T Consensus 89 ~~~~~~L~~~Gad~IVIaCNTah~ 112 (268)
T 3s81_A 89 ERYLHMLEDAGAECIVIPCNTAHY 112 (268)
T ss_dssp HHHHHHHHHTTCSEEECSCSGGGG
T ss_pred HHHHHHHHHcCCCEEEEeCCCHHH
Confidence 444445557899977776666654
No 344
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=26.76 E-value=3.3e+02 Score=24.01 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=31.6
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhh----------HHHHHHHHhhcCcccccceee
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLE----------AKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E----------~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+.+...++.+..++.+.+. .+.+++|.+..... ++.+++++|+.+++.|++|.-
T Consensus 118 ~~~~~~~~w~~iA~ryk~~-~~~Vi~el~NEP~~~~~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g 181 (345)
T 3jug_A 118 DLDRAVDYWIEMKDALIGK-EDTVIINIANEWYGSWDGAAWADGYIDVIPKLRDAGLTHTLMVDA 181 (345)
T ss_dssp HHHHHHHHHHHTHHHHTTC-TTTEEEECCTTCCCSSCHHHHHHHHHHHHHHHHHTTCCSCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCC-CCeEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 4566677777777777643 25556777664421 235556667766555666553
No 345
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=26.76 E-value=3.2e+02 Score=23.83 Aligned_cols=38 Identities=16% Similarity=0.059 Sum_probs=26.3
Q ss_pred cccccccccCchhHHHHhhhhhhccccEEEechhhhhh
Q 024544 44 LWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATI 81 (266)
Q Consensus 44 lws~~~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~ 81 (266)
.||..-...+++.+.+.-+..++.|||||--+-..+.|
T Consensus 52 SFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrP 89 (297)
T 1tx2_A 52 SFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRP 89 (297)
T ss_dssp TTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC---
T ss_pred ccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCC
Confidence 46654434567777777789999999999999765544
No 346
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=26.75 E-value=66 Score=27.60 Aligned_cols=29 Identities=17% Similarity=0.135 Sum_probs=24.9
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEeec
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFET 189 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~ET 189 (266)
.+.+++.++..+.++.|.+.|+|+|++=.
T Consensus 49 ~s~~~i~~~~~~~~~~L~~~g~d~IViAC 77 (276)
T 2dwu_A 49 RSVEEVQSFVFEMVEFLKQFPLKALVVAC 77 (276)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 46788888888889999999999998874
No 347
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=26.75 E-value=30 Score=29.17 Aligned_cols=26 Identities=19% Similarity=0.429 Sum_probs=22.6
Q ss_pred CchhHHHHhhhhhhccccEEEech-hh
Q 024544 53 SPHLVRKVHLDYLDAGANIIITAS-YQ 78 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnT-y~ 78 (266)
.++.+...-+-=.++|||+|.|.| |.
T Consensus 131 ~~e~i~~a~~ia~eaGADfVKTsTGf~ 157 (220)
T 1ub3_A 131 SPEEIARLAEAAIRGGADFLKTSTGFG 157 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 377788888888899999999999 75
No 348
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=26.69 E-value=63 Score=23.14 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=22.4
Q ss_pred hcCCCeEEeecc-chhhhHHHHHHHHhhcCcccccce
Q 024544 179 NSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 179 ~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
+..+|+++++.. |. .....+++.+++..+..|+++
T Consensus 49 ~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~ 84 (137)
T 3hdg_A 49 LHAPDVIITDIRMPK-LGGLEMLDRIKAGGAKPYVIV 84 (137)
T ss_dssp HHCCSEEEECSSCSS-SCHHHHHHHHHHTTCCCEEEE
T ss_pred ccCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCcEEE
Confidence 356899999954 44 344556666776555567554
No 349
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=26.56 E-value=67 Score=28.02 Aligned_cols=46 Identities=17% Similarity=0.195 Sum_probs=30.4
Q ss_pred HhhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+.+..++++|.+++ +|. -.++.|++.+++++++.+ +++++.+.
T Consensus 76 ~h~~~~~~al~~gk~v~-~EKP~~~~~~e~~~l~~~a~~~g--~~~~v~~~ 123 (344)
T 3ezy_A 76 THSELVIACAKAKKHVF-CEKPLSLNLADVDRMIEETKKAD--VILFTGFN 123 (344)
T ss_dssp GHHHHHHHHHHTTCEEE-EESCSCSCHHHHHHHHHHHHHHT--CCEEEECG
T ss_pred chHHHHHHHHhcCCeEE-EECCCCCCHHHHHHHHHHHHHhC--CcEEEeec
Confidence 35556666777887755 574 467788888888877754 55555553
No 350
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=26.26 E-value=1.1e+02 Score=25.64 Aligned_cols=82 Identities=12% Similarity=0.172 Sum_probs=43.8
Q ss_pred hhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCC-Cce-eecCchHHHhhhHHhhhhhhhhccc
Q 024544 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD-GIN-VVSGDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~-~~~-l~~G~~~~~a~~~~~~~~~~~avGi 248 (266)
.+++++..++|+..|-..+ .++ ++.+|+. .++|++ -...++ .+. ..-+.+++++.. +.. .+++.|-+
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~---~~~----i~~ir~~-v~~Pvi-g~~k~d~~~~~~~I~~~~~~i~~-~~~-~Gad~V~l 107 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRIEG---IDN----LRMTRSL-VSVPII-GIIKRDLDESPVRITPFLDDVDA-LAQ-AGAAIIAV 107 (232)
T ss_dssp HHHHHHHHHTTCSEEEEES---HHH----HHHHHTT-CCSCEE-EECBCCCSSCCCCBSCSHHHHHH-HHH-HTCSEEEE
T ss_pred HHHHHHHHHCCCeEEEECC---HHH----HHHHHHh-cCCCEE-EEEeecCCCcceEeCccHHHHHH-HHH-cCCCEEEE
Confidence 3456677789999988753 333 2334443 258873 322222 110 112234444433 333 47788888
Q ss_pred ccC---Ccchhhhhheee
Q 024544 249 NCT---SPRFIHGLILSV 263 (266)
Q Consensus 249 NC~---~p~~~~~~l~~l 263 (266)
+|+ .|+.+..+++.+
T Consensus 108 ~~~~~~~p~~l~~~i~~~ 125 (232)
T 3igs_A 108 DGTARQRPVAVEALLARI 125 (232)
T ss_dssp ECCSSCCSSCHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHH
Confidence 886 366666665544
No 351
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=26.23 E-value=1.5e+02 Score=25.44 Aligned_cols=74 Identities=15% Similarity=0.153 Sum_probs=44.3
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~ 234 (266)
++.+.+ +.+++.+++.|||.|++ |. .-+.+|=+.+++.+.+...+ |++.. .+.+..+++
T Consensus 17 iD~~~l----~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGv---------g~~~t~~ai 81 (288)
T 2nuw_A 17 VNVDAL----KTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQV---------GSLNLNDVM 81 (288)
T ss_dssp BCHHHH----HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEEC---------CCSCHHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEee---------CCCCHHHHH
Confidence 666554 44678888899999875 32 22456777888877764322 44333 234567777
Q ss_pred hHHhhh--hhhhhcccc
Q 024544 235 SIADSC--EQVVAVGIN 249 (266)
Q Consensus 235 ~~~~~~--~~~~avGiN 249 (266)
+..+.. .+++++.+-
T Consensus 82 ~la~~A~~~Gadavlv~ 98 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSH 98 (288)
T ss_dssp HHHHHHHTSCCSEEEEC
T ss_pred HHHHHHHhcCCCEEEEc
Confidence 666542 455655553
No 352
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=26.15 E-value=1.8e+02 Score=25.18 Aligned_cols=72 Identities=19% Similarity=0.237 Sum_probs=39.3
Q ss_pred ceEEEEecccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEe---------eccchhhhHHHHHHHH
Q 024544 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAF---------ETIPNKLEAKAYAELL 203 (266)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~---------ET~~~~~E~~a~~~a~ 203 (266)
+.+|-|=+-=+.+++.||+.| .+.+.+.+ +++.+++.|+|+|=+ +.++.-+|..-++-++
T Consensus 6 r~~iMGIlNvTPDSFsDGG~~-------~~~~~a~~----~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi 74 (270)
T 4hb7_A 6 KTKIMGILNVTPDSFSDGGKF-------NNVETAIN----RVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVV 74 (270)
T ss_dssp CCEEEEEEECC-----------------CHHHHHHH----HHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCCCCCCC-------CCHHHHHH----HHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHH
Confidence 456778777777777776433 23444433 677788899999955 5577777777666555
Q ss_pred hhcCcccccceee
Q 024544 204 EEEGITIPAWFSF 216 (266)
Q Consensus 204 ~~~~~~~Pv~iSf 216 (266)
+... ...+.||+
T Consensus 75 ~~l~-~~~v~iSI 86 (270)
T 4hb7_A 75 EAIV-GFDVKISV 86 (270)
T ss_dssp HHHT-TSSSEEEE
T ss_pred HHhh-cCCCeEEE
Confidence 5432 12355666
No 353
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=26.01 E-value=2.3e+02 Score=27.18 Aligned_cols=49 Identities=22% Similarity=0.234 Sum_probs=31.6
Q ss_pred HHHHHHHhhhhhHHhhhcCCCeEEeeccch------------------hhhHHHHHHHHhhcCcccccceeee
Q 024544 163 LETLKEFHRRRVLILANSGADLIAFETIPN------------------KLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 163 ~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~------------------~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.+.+.++|++++ +.|+.+++.|.+.- +...+.+.+++.+.+ .|+++.+.
T Consensus 36 ~~~~~~~y~~ra----~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g--~~i~~Ql~ 102 (671)
T 1ps9_A 36 AERLAAFYAERA----RHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEG--GKIALQIL 102 (671)
T ss_dssp HHHHHHHHHHHH----HTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHTT--CCEEEEEC
T ss_pred cHHHHHHHHHHh----cCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhcC--CEEEEEec
Confidence 467888887765 47889999886431 113445556666655 57777663
No 354
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=25.84 E-value=73 Score=23.38 Aligned_cols=38 Identities=11% Similarity=0.092 Sum_probs=23.6
Q ss_pred hhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccce
Q 024544 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
+.+..+|++++...-.-.....+++.+++..+..|+++
T Consensus 62 l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 99 (150)
T 4e7p_A 62 LEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVV 99 (150)
T ss_dssp HTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEE
T ss_pred hhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEE
Confidence 34467899999854323345556666776555677654
No 355
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=25.77 E-value=1.2e+02 Score=25.40 Aligned_cols=48 Identities=15% Similarity=0.066 Sum_probs=32.4
Q ss_pred hhHHhhhcCCCeEEee-----ccchhhhHHHHHHHHhhcCcccccceeeecCC
Q 024544 173 RVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (266)
Q Consensus 173 qi~~l~~~gvD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~ 220 (266)
.++.+.++|+|++-+- .+|++..-..+++.+|+..+++|+-+-+.+.+
T Consensus 23 ~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~d 75 (227)
T 1tqx_A 23 ETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEY 75 (227)
T ss_dssp HHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSC
T ss_pred HHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcC
Confidence 4566677888876443 34677776788888887543577777666655
No 356
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=25.70 E-value=3e+02 Score=23.08 Aligned_cols=71 Identities=10% Similarity=0.032 Sum_probs=43.6
Q ss_pred ceEEEEecccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeeccchh----------hhHHHHHHH
Q 024544 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNK----------LEAKAYAEL 202 (266)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~----------~E~~a~~~a 202 (266)
.++|.-.+-.++. +.+....+...++.++.++.+.+.. +.+++|.+..+ .-.+.++.+
T Consensus 77 Gi~Vild~H~~~~-----------~~~~~~~~~~~~~w~~ia~~y~~~~-~~v~~el~NEP~~~~~~~~~~~~~~~~~~~ 144 (294)
T 2whl_A 77 KMVAVVEVHDATG-----------RDSRSDLNRAVDYWIEMKDALIGKE-DTVIINIANEWYGSWDGSAWADGYIDVIPK 144 (294)
T ss_dssp TCEEEEEECTTTT-----------CCCHHHHHHHHHHHHHTHHHHTTCT-TTEEEECCTTCCCSSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeccCCC-----------CCcchhHHHHHHHHHHHHHHHcCCC-CeEEEEecCCCCCCCChHHHHHHHHHHHHH
Confidence 4666666655432 1112356677788887777776532 45578887643 223456778
Q ss_pred HhhcCccccccee
Q 024544 203 LEEEGITIPAWFS 215 (266)
Q Consensus 203 ~~~~~~~~Pv~iS 215 (266)
+|+.+++.|+++.
T Consensus 145 IR~~d~~~~i~v~ 157 (294)
T 2whl_A 145 LRDAGLTHTLMVD 157 (294)
T ss_dssp HHHTTCCSCEEEE
T ss_pred HHhcCCCcEEEEc
Confidence 8887666677665
No 357
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=25.62 E-value=87 Score=26.89 Aligned_cols=45 Identities=13% Similarity=0.090 Sum_probs=30.8
Q ss_pred hhhhhHHhhhcCCCeEEeeccc-----------hhhhHHHHHHHHhhcCcccccceee
Q 024544 170 HRRRVLILANSGADLIAFETIP-----------NKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~-----------~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
-.+.++.+.++|+|++-+-|+- -.+.++.+.++.++.+ +|++.++
T Consensus 39 a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~G--l~~~te~ 94 (262)
T 1zco_A 39 IMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYG--LVTVTEV 94 (262)
T ss_dssp HHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcC--CcEEEee
Confidence 3346778888999999988763 0556666667777765 6666544
No 358
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=25.57 E-value=1.9e+02 Score=25.78 Aligned_cols=28 Identities=11% Similarity=0.157 Sum_probs=21.6
Q ss_pred ccccCchhHHHHhhhhhhccccEEEech
Q 024544 49 CLVSSPHLVRKVHLDYLDAGANIIITAS 76 (266)
Q Consensus 49 ~ll~~Pe~V~~iH~~Yl~AGAdiI~TnT 76 (266)
..+++++...+.-+++.++|..-|...|
T Consensus 80 ~~l~~~~~~~~~l~~~~~aGv~tiV~~t 107 (364)
T 3k2g_A 80 IALDDLDLAIAEVKQFAAVGGRSIVDPT 107 (364)
T ss_dssp SEECCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred cccccHHHHHHHHHHHHhcCCCeEEEeC
Confidence 3567888777888999999988666655
No 359
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=25.54 E-value=59 Score=26.96 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=26.9
Q ss_pred HHhhhcCCCeEEe----eccchhhhHHHHHHHHhhcCc--ccccceeee
Q 024544 175 LILANSGADLIAF----ETIPNKLEAKAYAELLEEEGI--TIPAWFSFN 217 (266)
Q Consensus 175 ~~l~~~gvD~i~~----ET~~~~~E~~a~~~a~~~~~~--~~Pv~iSf~ 217 (266)
++..+.++|++.+ =+-+++.+++..++.+++.+. +.|+|+.-.
T Consensus 137 ~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 137 EEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGA 185 (215)
T ss_dssp HHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESS
T ss_pred HHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECC
Confidence 3444567887777 233556667777777777654 567776543
No 360
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=25.54 E-value=2.7e+02 Score=22.65 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=23.0
Q ss_pred HHHHHHhhhhhHHhh-hcCCCeEEeeccc--------hhhhHHHHHH
Q 024544 164 ETLKEFHRRRVLILA-NSGADLIAFETIP--------NKLEAKAYAE 201 (266)
Q Consensus 164 ~e~~~~~~~qi~~l~-~~gvD~i~~ET~~--------~~~E~~a~~~ 201 (266)
+.+.+..++.++... +.|| .|.+|+++ ++.|+..+++
T Consensus 115 ~~~~~~l~~l~~~a~~~~gv-~l~lEn~~~~~~~~~~~~~~~~~l~~ 160 (270)
T 3aam_A 115 ERVKEGALKALRLAGVRSRP-VLLVENTAGGGEKVGARFEELAWLVA 160 (270)
T ss_dssp HHHHHHHHHHHHHHTCCSSS-EEEEECCCCCTTBSCCSHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhcccCCC-EEEEecCCCCCCccCCCHHHHHHHHH
Confidence 455566666555555 5788 46779985 5556555554
No 361
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=25.50 E-value=3.2e+02 Score=23.38 Aligned_cols=54 Identities=7% Similarity=-0.035 Sum_probs=33.0
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccchh----------hh----HHHHHHHHhhcCccccccee
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIPNK----------LE----AKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~----------~E----~~a~~~a~~~~~~~~Pv~iS 215 (266)
..+...++.+..++.+.+....++.+|++..+ .. .+.++.++|+..++.+|++.
T Consensus 121 ~~~~~~~~~~~ia~ry~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~v~ 188 (341)
T 1vjz_A 121 AQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIID 188 (341)
T ss_dssp HHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCCCcccccHHHHHHHHHHHHHHHHhhCCCcEEEEc
Confidence 45556666666666665532567888887642 22 34566777776655666663
No 362
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=25.45 E-value=30 Score=28.93 Aligned_cols=19 Identities=21% Similarity=0.277 Sum_probs=13.9
Q ss_pred HHHHhhhhhhccccEEEec
Q 024544 57 VRKVHLDYLDAGANIIITA 75 (266)
Q Consensus 57 V~~iH~~Yl~AGAdiI~Tn 75 (266)
..++-+.|.++|++.|.-.
T Consensus 37 ~~~~a~~~~~~G~~~i~v~ 55 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLT 55 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEE
Confidence 4556677889999977643
No 363
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=25.41 E-value=51 Score=28.87 Aligned_cols=67 Identities=19% Similarity=0.129 Sum_probs=39.9
Q ss_pred hcCCCeEEeeccchhhhHH---HHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhcccccCCcc
Q 024544 179 NSGADLIAFETIPNKLEAK---AYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPR 254 (266)
Q Consensus 179 ~~gvD~i~~ET~~~~~E~~---a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC~~p~ 254 (266)
+.|+++++-|.+..-.... ...+.+ ....+.|+++.+.-. +-..+.+++..+.+ . +++|-|||..|.
T Consensus 26 ~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~------~~~~~~~aa~~a~~-~-~d~Iein~gcP~ 95 (318)
T 1vhn_A 26 EWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGS------EPNELSEAARILSE-K-YKWIDLNAGCPV 95 (318)
T ss_dssp TTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECS------CHHHHHHHHHHHTT-T-CSEEEEEECCCC
T ss_pred HHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCC------CHHHHHHHHHHHHH-h-CCEEEEECCCCc
Confidence 4588999999765432211 112222 112357999998611 12345566665555 4 899999998774
No 364
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=25.39 E-value=66 Score=22.85 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=22.9
Q ss_pred hcCCCeEEeecc-chhhhHHHHHHHHhhcCcccccce
Q 024544 179 NSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 179 ~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
+..+|++++... |. .....+++.+++..+..|+++
T Consensus 44 ~~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~ii~ 79 (134)
T 3f6c_A 44 TLKPDIVIIDVDIPG-VNGIQVLETLRKRQYSGIIII 79 (134)
T ss_dssp HHCCSEEEEETTCSS-SCHHHHHHHHHHTTCCSEEEE
T ss_pred hcCCCEEEEecCCCC-CChHHHHHHHHhcCCCCeEEE
Confidence 356899999854 44 345566666776655677654
No 365
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=25.27 E-value=66 Score=27.90 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=28.8
Q ss_pred HhhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceee
Q 024544 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.|.+++..++++|.+++ +|- -.+..|++.+++++++.+ +++++.+
T Consensus 78 ~h~~~~~~al~aGkhVl-~EKP~a~~~~e~~~l~~~a~~~g--~~~~v~~ 124 (336)
T 2p2s_A 78 DRAELALRTLDAGKDFF-TAKPPLTTLEQLDAVQRRVAETG--RKFAVYF 124 (336)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSSCCSCHHHHHHHHHHHHHHC--CCEEECC
T ss_pred hHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHcC--CEEEEee
Confidence 45666666777787654 473 346778888888777754 4555444
No 366
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=25.23 E-value=74 Score=30.21 Aligned_cols=43 Identities=14% Similarity=0.189 Sum_probs=33.4
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+...++.|+|+|++=-+.+.++++.+.+.+++.+.+.++|.-+
T Consensus 199 I~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~IiakI 241 (500)
T 1a3w_A 199 LRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKI 241 (500)
T ss_dssp HHHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5556778999999999999999999998887654345666554
No 367
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=25.22 E-value=1e+02 Score=24.20 Aligned_cols=43 Identities=19% Similarity=0.156 Sum_probs=29.4
Q ss_pred HHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCc-ccccceeee
Q 024544 175 LILANSGADLIAFET--IPNKLEAKAYAELLEEEGI-TIPAWFSFN 217 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~-~~Pv~iSf~ 217 (266)
+...+.++|+|.+=. -+++..++.+++.+++.+. +.|+|+.-.
T Consensus 63 ~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 63 MAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp HHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred HHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 444557889887654 3456778888888888653 577777653
No 368
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=25.09 E-value=80 Score=28.28 Aligned_cols=45 Identities=16% Similarity=0.039 Sum_probs=31.0
Q ss_pred hhhHHhhhcCCCeEEeeccchh---hhHHHHHHHHhhcCcccccceeeec
Q 024544 172 RRVLILANSGADLIAFETIPNK---LEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~---~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
..++++++.|++.|++|++..- .++..+++.+.+. ++||+++-.|
T Consensus 236 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~--Gi~VV~~Sr~ 283 (337)
T 4pga_A 236 TAYKALAQNGAKALIHAGTGNGSVSSRVVPALQQLRKN--GTQIIRSSHV 283 (337)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCTTTHHHHHHHHHT--TCEEEEEESC
T ss_pred HHHHHHHhcCCCEEEEEEeCCCCCCHHHHHHHHHHHHC--CCEEEEeccC
Confidence 3567777899999999998542 2444444434343 4899998888
No 369
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=25.03 E-value=88 Score=26.02 Aligned_cols=41 Identities=22% Similarity=0.133 Sum_probs=27.2
Q ss_pred hhHHhhhcCCCeEEeecc--chhhhHHHHHHHHhhcCcccccceee
Q 024544 173 RVLILANSGADLIAFETI--PNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~--~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.++.+.++|+|.+.+=-- +. .+....++.+++.+ +.+.+++
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g--~~~gv~~ 119 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELG--KKAGAVL 119 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcC--CcEEEEE
Confidence 356777899999955433 33 45667777788755 5566666
No 370
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=24.96 E-value=71 Score=28.61 Aligned_cols=47 Identities=13% Similarity=0.059 Sum_probs=32.0
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
.|.+++..++++|..+| +| --.+++|++.+++++++.+ +++++.|..
T Consensus 97 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~v~~~~ 145 (398)
T 3dty_A 97 THYSITKAALEAGLHVV-CEKPLCFTVEQAENLRELSHKHN--RIVGVTYGY 145 (398)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSCSCSCHHHHHHHHHHHHHTT--CCEEECCGG
T ss_pred HHHHHHHHHHHCCCeEE-EeCCCcCCHHHHHHHHHHHHHcC--CeEEEEecc
Confidence 46667777778887654 47 2456788888888887755 566665543
No 371
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=24.73 E-value=67 Score=24.69 Aligned_cols=58 Identities=17% Similarity=0.165 Sum_probs=35.0
Q ss_pred CCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhcccccCC
Q 024544 181 GADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (266)
Q Consensus 181 gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC~~ 252 (266)
.+|++++= +|. ..+..+++.+.+.+. .-+|+.. |+.-.++++.+++ .++..+|=||.+
T Consensus 70 ~~Dlvii~-vp~-~~v~~v~~~~~~~g~-~~i~i~~----------~~~~~~l~~~a~~-~Gi~~igpnc~g 127 (145)
T 2duw_A 70 KVDMVDVF-RNS-EAAWGVAQEAIAIGA-KTLWLQL----------GVINEQAAVLARE-AGLSVVMDRCPA 127 (145)
T ss_dssp CCSEEECC-SCS-THHHHHHHHHHHHTC-CEEECCT----------TCCCHHHHHHHHT-TTCEEECSCCHH
T ss_pred CCCEEEEE-eCH-HHHHHHHHHHHHcCC-CEEEEcC----------ChHHHHHHHHHHH-cCCEEEcCCeee
Confidence 68999874 553 566676665544442 2356532 2223455555554 688889999964
No 372
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=24.72 E-value=90 Score=27.92 Aligned_cols=48 Identities=15% Similarity=0.015 Sum_probs=32.0
Q ss_pred hhhHHhhhcCCCeEEeeccchh---hhHHHHHHHHhhcCcccccceeeecCCC
Q 024544 172 RRVLILANSGADLIAFETIPNK---LEAKAYAELLEEEGITIPAWFSFNSKDG 221 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~---~E~~a~~~a~~~~~~~~Pv~iSf~~~~~ 221 (266)
..++++++.|++.|++|++..- .++..+++.+.+. ++||+++-.|..+
T Consensus 236 ~~l~a~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~--Gi~VV~~Src~~G 286 (334)
T 3nxk_A 236 VAAKALFEHGTKGIVVAGSGAGSIHKNQKDVLKELLKK--GLKVVVSSRVVAG 286 (334)
T ss_dssp HHHHHHHHTTCCEEEEEEBTTTBCCHHHHHHHHHHHTT--TCEEEEEESSSBS
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCcHHHHHHHHHHHHC--CCEEEEeCCCCCC
Confidence 4577788899999999998642 2333333333332 5899988877543
No 373
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=24.70 E-value=70 Score=27.94 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=27.0
Q ss_pred hhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceee
Q 024544 170 HRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
|.+++..++++|..+| +|- -.+.+|++.+++++++.+ +++++.+
T Consensus 78 h~~~~~~al~aGk~Vl-~EKP~a~~~~e~~~l~~~a~~~g--~~~~v~~ 123 (345)
T 3f4l_A 78 HFEYAKRALEAGKNVL-VEKPFTPTLAQAKELFALAKSKG--LTVTPYQ 123 (345)
T ss_dssp HHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT--CCEEECC
T ss_pred HHHHHHHHHHcCCcEE-EeCCCCCCHHHHHHHHHHHHHcC--CeEEEEe
Confidence 5556666667776554 464 456777777777776654 4444444
No 374
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=24.70 E-value=2.3e+02 Score=24.09 Aligned_cols=29 Identities=14% Similarity=0.177 Sum_probs=20.4
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccc
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIP 191 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~ 191 (266)
..+.+.+..++..+...+.||.+ .+|+.+
T Consensus 144 ~~~~~~~~l~~l~~~a~~~Gv~l-~lEn~~ 172 (305)
T 3obe_A 144 DAKVVSEIFNRAGEITKKAGILW-GYHNHS 172 (305)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEE-EEECCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCEE-EEecCc
Confidence 45666777777777777889965 458765
No 375
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=24.63 E-value=67 Score=26.50 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=28.9
Q ss_pred hhhHHhhhcCCCeEEee-----ccchhhhHHHHHHHHhhcCcccccceeeecCC
Q 024544 172 RRVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~ 220 (266)
+.++.+.++|+|++-+- ++|+.......++.+++.. +.|+-+-+.+.+
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~-~~~~~v~lmv~d 75 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT-KAYLDCHLMVTN 75 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC-CSEEEEEEESSC
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc-CCcEEEEEEecC
Confidence 35677888999998555 5566444345555566543 356655555544
No 376
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=24.61 E-value=77 Score=27.97 Aligned_cols=44 Identities=9% Similarity=0.088 Sum_probs=29.4
Q ss_pred hhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceee
Q 024544 170 HRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
|.+.+..++++|..++ +| .-.+.+|++.+++++++.+ +++++.+
T Consensus 78 h~~~~~~al~aGkhVl-~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~ 123 (359)
T 3e18_A 78 HKELAISALEAGKHVV-CEKPVTMTSEDLLAIMDVAKRVN--KHFMVHQ 123 (359)
T ss_dssp HHHHHHHHHHTTCEEE-EESSCCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHCCCCEE-eeCCCcCCHHHHHHHHHHHHHhC--CeEEEEe
Confidence 5556667777887655 57 4557788888888877754 4555444
No 377
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=24.48 E-value=2e+02 Score=24.41 Aligned_cols=31 Identities=3% Similarity=0.097 Sum_probs=21.8
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCe-EEeeccc
Q 024544 161 VSLETLKEFHRRRVLILANSGADL-IAFETIP 191 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~-i~~ET~~ 191 (266)
...+.+.+..++..+...+.||.. |.+|+.+
T Consensus 137 ~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 137 DEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 345667777777778888899982 5557664
No 378
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=24.44 E-value=1.2e+02 Score=26.00 Aligned_cols=71 Identities=10% Similarity=0.022 Sum_probs=44.0
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-ec-----cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-ET-----IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-ET-----~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~ 234 (266)
++.+.++ .+++.++++ ||.|++ -| .-+.+|=+.+++.+.+ ++||++... +.+..+++
T Consensus 16 iD~~~l~----~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~---rvpviaGvg---------~~~t~~ai 78 (283)
T 2pcq_A 16 LDEEAFR----ELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP---RKPFLVGLM---------EETLPQAE 78 (283)
T ss_dssp BCHHHHH----HHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC---SSCCEEEEC---------CSSHHHHH
T ss_pred cCHHHHH----HHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh---CCcEEEeCC---------CCCHHHHH
Confidence 5665544 466777778 888764 22 2245576777777766 589987762 34566777
Q ss_pred hHHhhh--hhhhhccc
Q 024544 235 SIADSC--EQVVAVGI 248 (266)
Q Consensus 235 ~~~~~~--~~~~avGi 248 (266)
+..+.. .+++++.+
T Consensus 79 ~la~~A~~~Gadavlv 94 (283)
T 2pcq_A 79 GALLEAKAAGAMALLA 94 (283)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhcCCCEEEe
Confidence 665432 45565544
No 379
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=24.33 E-value=84 Score=27.25 Aligned_cols=46 Identities=15% Similarity=0.141 Sum_probs=31.7
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+++..++++|.. +++| --.+.+|++.+++++++.+ +++++.+.
T Consensus 78 ~H~~~~~~al~~Gkh-Vl~EKP~a~~~~e~~~l~~~a~~~~--~~~~v~~~ 125 (334)
T 3ohs_X 78 QHKAAVMLCLAAGKA-VLCEKPMGVNAAEVREMVTEARSRG--LFLMEAIW 125 (334)
T ss_dssp GHHHHHHHHHHTTCE-EEEESSSSSSHHHHHHHHHHHHHTT--CCEEEECG
T ss_pred HHHHHHHHHHhcCCE-EEEECCCCCCHHHHHHHHHHHHHhC--CEEEEEEh
Confidence 466677777788866 4458 3457888888888888755 55665553
No 380
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=24.24 E-value=81 Score=27.10 Aligned_cols=44 Identities=25% Similarity=0.366 Sum_probs=25.4
Q ss_pred hhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceee
Q 024544 170 HRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
|.+.+..++++|.+++ +|- ..+..|++.+.+++++.+ +.+++.+
T Consensus 82 h~~~~~~al~~Gk~v~-~eKP~~~~~~~~~~l~~~a~~~g--~~~~~~~ 127 (315)
T 3c1a_A 82 HAEITLAAIASGKAVL-VEKPLTLDLAEAEAVAAAAKATG--VMVWVEH 127 (315)
T ss_dssp HHHHHHHHHHTTCEEE-EESSSCSCHHHHHHHHHHHHHHC--CCEEEEC
T ss_pred HHHHHHHHHHCCCcEE-EcCCCcCCHHHHHHHHHHHHHcC--CEEEEee
Confidence 4444555566776655 572 346777777777776654 4444443
No 381
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=24.22 E-value=60 Score=29.12 Aligned_cols=60 Identities=12% Similarity=0.008 Sum_probs=38.6
Q ss_pred eccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHh------hhHHhhhhhhhhccccc
Q 024544 188 ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC------ASIADSCEQVVAVGINC 250 (266)
Q Consensus 188 ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a------~~~~~~~~~~~avGiNC 250 (266)
-++.++++++.+-+++++.+..++|++-+.. |.-+.|-+.+++ +..+.+..++...|+-|
T Consensus 102 ~~vds~~~l~~l~~~a~~~~~~~~V~l~vdt---G~~R~G~~~~e~~~~~~~~~~i~~~~~l~l~Gl~t 167 (386)
T 1vfs_A 102 VSVSGMWALDEVRAAARAAGRTARIQLKADT---GLGRNGCQPADWAELVGAAVAAQAEGTVQVTGVWS 167 (386)
T ss_dssp EEECSHHHHHHHHHHHHHHTSCEEEEEEBCS---SCCSSSBCHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred EEECCHHHHHHHHHHHHhcCCceEEEEEEcC---CCCCCCCCHhHHHHHHHHHHHHHhCCCceEEEEEe
Confidence 3777888888888777665545677777743 334578776654 33344334566677755
No 382
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=24.19 E-value=55 Score=29.16 Aligned_cols=83 Identities=11% Similarity=-0.045 Sum_probs=44.9
Q ss_pred hHHhhhcCCCeEEeec-cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhh--hhhhhccccc
Q 024544 174 VLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC--EQVVAVGINC 250 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~--~~~~avGiNC 250 (266)
++...++|+|.+.+=+ .+..++++.+++.+++.+ +.+..++.. . ...+++.+++.++.. .++..|.+.=
T Consensus 99 i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G--~~v~~~~~~--a----~~~~~e~~~~ia~~~~~~Ga~~i~l~D 170 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHCTEADVSKQHIEYARNLG--MDTVGFLMM--S----HMIPAEKLAEQGKLMESYGATCIYMAD 170 (345)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHT--CEEEEEEES--T----TSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCC--CEEEEEEEe--C----CCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 4445567999887643 223467888888888876 555555421 1 234444444444321 2333333321
Q ss_pred ----CCcchhhhhheeee
Q 024544 251 ----TSPRFIHGLILSVR 264 (266)
Q Consensus 251 ----~~p~~~~~~l~~l~ 264 (266)
..|..+..+++.++
T Consensus 171 T~G~~~P~~v~~lv~~l~ 188 (345)
T 1nvm_A 171 SGGAMSMNDIRDRMRAFK 188 (345)
T ss_dssp TTCCCCHHHHHHHHHHHH
T ss_pred CcCccCHHHHHHHHHHHH
Confidence 13777777666554
No 383
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=24.11 E-value=1.2e+02 Score=26.03 Aligned_cols=35 Identities=31% Similarity=0.299 Sum_probs=24.2
Q ss_pred hhHHhhhcCCCeEEee-ccchhhhHHHHHHHHhhcC
Q 024544 173 RVLILANSGADLIAFE-TIPNKLEAKAYAELLEEEG 207 (266)
Q Consensus 173 qi~~l~~~gvD~i~~E-T~~~~~E~~a~~~a~~~~~ 207 (266)
|+......|+|.+++- ++-+..+++..++.+++.|
T Consensus 115 qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lG 150 (251)
T 1i4n_A 115 QVKLASSVGADAILIIARILTAEQIKEIYEAAEELG 150 (251)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcC
Confidence 4455667899998765 4434567888888777755
No 384
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=24.07 E-value=81 Score=23.19 Aligned_cols=36 Identities=11% Similarity=0.199 Sum_probs=22.5
Q ss_pred hhcCCCeEEeec-cchhhhHHHHHHHHhhcCcccccce
Q 024544 178 ANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 178 ~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
.+..+|++++.. +|.. ....+++.+++..+..|+++
T Consensus 55 ~~~~~dlvi~D~~l~~~-~g~~~~~~l~~~~~~~~ii~ 91 (153)
T 3hv2_A 55 ASREVDLVISAAHLPQM-DGPTLLARIHQQYPSTTRIL 91 (153)
T ss_dssp HHSCCSEEEEESCCSSS-CHHHHHHHHHHHCTTSEEEE
T ss_pred HcCCCCEEEEeCCCCcC-cHHHHHHHHHhHCCCCeEEE
Confidence 345689999985 4443 44555666666544677664
No 385
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=24.04 E-value=28 Score=29.91 Aligned_cols=38 Identities=26% Similarity=0.361 Sum_probs=25.5
Q ss_pred hHHhhhcCCCeEEe--eccchhhhHHHHHHHHhhcCcccccceee
Q 024544 174 VLILANSGADLIAF--ETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 174 i~~l~~~gvD~i~~--ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
++.+.++|+|++.+ |+.+ ++...++.+|+.+ +.+.+++
T Consensus 102 i~~~~~aGAd~itvH~Ea~~---~~~~~i~~ir~~G--~k~Gval 141 (246)
T 3inp_A 102 IESFAKAGATSIVFHPEASE---HIDRSLQLIKSFG--IQAGLAL 141 (246)
T ss_dssp HHHHHHHTCSEEEECGGGCS---CHHHHHHHHHTTT--SEEEEEE
T ss_pred HHHHHHcCCCEEEEccccch---hHHHHHHHHHHcC--CeEEEEe
Confidence 46677899999977 5443 5667777788765 4444444
No 386
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=24.04 E-value=97 Score=22.34 Aligned_cols=38 Identities=11% Similarity=0.026 Sum_probs=23.7
Q ss_pred hhcCCCeEEeeccchhhhHHHHHHHHhh--cCccccccee
Q 024544 178 ANSGADLIAFETIPNKLEAKAYAELLEE--EGITIPAWFS 215 (266)
Q Consensus 178 ~~~gvD~i~~ET~~~~~E~~a~~~a~~~--~~~~~Pv~iS 215 (266)
.+..+|+++++....-.....+++.+++ ..+..|+++-
T Consensus 48 ~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~ 87 (144)
T 3kht_A 48 QQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVIL 87 (144)
T ss_dssp TTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEE
T ss_pred hcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEE
Confidence 3457899999954333355566677776 3345776643
No 387
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=24.04 E-value=1.2e+02 Score=25.14 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=24.6
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccc
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIP 191 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~ 191 (266)
+.+++..+..+.++.|.+.|+|+|++=+-+
T Consensus 57 ~~~~~~~~l~~~~~~L~~~g~~~iviaCNT 86 (231)
T 3ojc_A 57 DWQTAAQLLSNAAISLKHAGAEVIVVCTNT 86 (231)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECSSG
T ss_pred ChhHHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 457888888888999999999999886543
No 388
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=24.03 E-value=96 Score=26.70 Aligned_cols=46 Identities=20% Similarity=0.306 Sum_probs=30.9
Q ss_pred hhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 170 HRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
|.+.+..++++|.+++ +|- ..+..|++.+.+++++.+ +++++.+..
T Consensus 76 h~~~~~~al~~Gk~V~-~EKP~~~~~~~~~~l~~~a~~~g--~~~~v~~~~ 123 (323)
T 1xea_A 76 HSTLAAFFLHLGIPTF-VDKPLAASAQECENLYELAEKHH--QPLYVGFNR 123 (323)
T ss_dssp HHHHHHHHHHTTCCEE-EESCSCSSHHHHHHHHHHHHHTT--CCEEEECGG
T ss_pred HHHHHHHHHHCCCeEE-EeCCCcCCHHHHHHHHHHHHhcC--CeEEEeecc
Confidence 5555656667888766 573 346788888888888755 566665543
No 389
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=24.00 E-value=1.7e+02 Score=25.20 Aligned_cols=73 Identities=15% Similarity=0.098 Sum_probs=43.5
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEe-----ec-cchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhh
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~ 234 (266)
++.+.++ .+++.+++.|||.|++ |. .-+.+|=+.+++.+.+...+ |++.. .+.+..+++
T Consensus 17 iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGv---------g~~~t~~ai 81 (293)
T 1w3i_A 17 IDKEKLK----IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQV---------GGLNLDDAI 81 (293)
T ss_dssp BCHHHHH----HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEEC---------CCSCHHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEec---------CCCCHHHHH
Confidence 6665544 4677888899998765 31 12455777888877764322 44333 234567777
Q ss_pred hHHhhh--hhhhhccc
Q 024544 235 SIADSC--EQVVAVGI 248 (266)
Q Consensus 235 ~~~~~~--~~~~avGi 248 (266)
+..+.. .+++++.+
T Consensus 82 ~la~~A~~~Gadavlv 97 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIAS 97 (293)
T ss_dssp HHHHHGGGSCCSEEEE
T ss_pred HHHHHHHhcCCCEEEE
Confidence 766542 35565554
No 390
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=23.99 E-value=74 Score=26.96 Aligned_cols=40 Identities=20% Similarity=0.170 Sum_probs=28.7
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccc
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~ 213 (266)
.++..+.+.++|.|++=. +..++..+++++++.+...|++
T Consensus 181 ~~~~~l~~~~~dav~~~~--~~~~a~~~~~~~~~~g~~~p~i 220 (362)
T 3snr_A 181 GQALKLVAANPDAILVGA--SGTAAALPQTTLRERGYNGLIY 220 (362)
T ss_dssp HHHHHHHHHCCSEEEEEC--CHHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHhcCCCEEEEec--CcchHHHHHHHHHHcCCCccEE
Confidence 345556667899998733 3557888889999888777763
No 391
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=23.98 E-value=38 Score=30.32 Aligned_cols=65 Identities=14% Similarity=0.102 Sum_probs=39.1
Q ss_pred cCCCeEEeeccchhhhH----HHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhcccccCCcc
Q 024544 180 SGADLIAFETIPNKLEA----KAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPR 254 (266)
Q Consensus 180 ~gvD~i~~ET~~~~~E~----~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGiNC~~p~ 254 (266)
.|+++++-|.+..-..+ +.+++ +.. .+.|+++.+.-. +-..+.+++..+.. .++++|-|||..|.
T Consensus 27 Gg~gli~te~~~~~~~~~~~~~~~~~-~~~--~~~p~~vQL~g~------~p~~~~~aA~~a~~-~G~D~IeIn~gcP~ 95 (350)
T 3b0p_A 27 SLGVRLYTEMTVDQAVLRGNRERLLA-FRP--EEHPIALQLAGS------DPKSLAEAARIGEA-FGYDEINLNLGCPS 95 (350)
T ss_dssp CSSSBEECCCEEHHHHHHSCHHHHHC-CCG--GGCSEEEEEECS------CHHHHHHHHHHHHH-TTCSEEEEEECCCS
T ss_pred CCCCEEEeCCEEechhhcCCHHHHhc-cCC--CCCeEEEEeCCC------CHHHHHHHHHHHHH-cCCCEEEECCcCCC
Confidence 46799999987643211 11222 222 247899888521 12345566665554 57899999997663
No 392
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=23.87 E-value=82 Score=23.15 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=22.7
Q ss_pred hhcCCCeEEeec-cchhhhHHHHHHHHhhcCcccccce
Q 024544 178 ANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 178 ~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
.+..+|++++.. +|.. ....+++.+++..+..|+++
T Consensus 48 ~~~~~dlvi~d~~l~~~-~g~~~~~~l~~~~~~~~ii~ 84 (154)
T 2rjn_A 48 KGTSVQLVISDMRMPEM-GGEVFLEQVAKSYPDIERVV 84 (154)
T ss_dssp TTSCCSEEEEESSCSSS-CHHHHHHHHHHHCTTSEEEE
T ss_pred hcCCCCEEEEecCCCCC-CHHHHHHHHHHhCCCCcEEE
Confidence 345689999984 4543 34456666666544677764
No 393
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=23.77 E-value=88 Score=27.31 Aligned_cols=46 Identities=17% Similarity=0.154 Sum_probs=32.0
Q ss_pred HhhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+++..++++|.+++ +|- -.+..|++.+++++++.+ +++++.+.
T Consensus 94 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~v~~~ 141 (340)
T 1zh8_A 94 LNLPFIEKALRKGVHVI-CEKPISTDVETGKKVVELSEKSE--KTVYIAEN 141 (340)
T ss_dssp GHHHHHHHHHHTTCEEE-EESSSSSSHHHHHHHHHHHHHCS--SCEEEECG
T ss_pred HHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHcC--CeEEEEec
Confidence 46677777788887654 483 347888888888888755 55555553
No 394
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=23.76 E-value=1.2e+02 Score=28.18 Aligned_cols=50 Identities=16% Similarity=0.111 Sum_probs=31.1
Q ss_pred HHhhhhhHHhh-hcCCCeEEeeccc-------hhhhHHHHHHHHhhcCcccccceeee
Q 024544 168 EFHRRRVLILA-NSGADLIAFETIP-------NKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 168 ~~~~~qi~~l~-~~gvD~i~~ET~~-------~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
+.|.+.++.++ +.+||.+++--.| +...+..+++++++...++|+++.+.
T Consensus 354 ~~~~~al~~~l~dp~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~ 411 (457)
T 2csu_A 354 EDYYRTAKLLLQDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFM 411 (457)
T ss_dssp HHHHHHHHHHHHSTTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCEEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeC
Confidence 34556667665 4789999875421 12345677777776323589888663
No 395
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=23.74 E-value=88 Score=28.25 Aligned_cols=48 Identities=6% Similarity=-0.112 Sum_probs=32.2
Q ss_pred hhhHHhhhcCCCeEEeeccchh--h---hHHHHHHHHhhcCcccccceeeecCCC
Q 024544 172 RRVLILANSGADLIAFETIPNK--L---EAKAYAELLEEEGITIPAWFSFNSKDG 221 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~--~---E~~a~~~a~~~~~~~~Pv~iSf~~~~~ 221 (266)
..++++++.|++.|++|++..- . ++..+++.+.+. ++||+++-.|..+
T Consensus 244 ~~l~a~~~~g~~GiVle~~G~Gn~p~~~~~~~~l~~a~~~--Gi~VV~~Src~~G 296 (358)
T 2him_A 244 DVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDR--GIVVVNLTQCMSG 296 (358)
T ss_dssp HHHHHHTSSSCSEEEEEEBTTTBCCCCHHHHHHHHHHHHT--TCEEEEEESSSBC
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCCCcHHHHHHHHHHHHC--CCEEEEEcCCCCC
Confidence 3567777889999999987642 2 444444444443 4899888877543
No 396
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=23.70 E-value=92 Score=27.72 Aligned_cols=48 Identities=17% Similarity=0.059 Sum_probs=32.5
Q ss_pred hhhHHhhhcCCCeEEeeccchh---hhHHHHHHHHh-hcCcccccceeeecCCC
Q 024544 172 RRVLILANSGADLIAFETIPNK---LEAKAYAELLE-EEGITIPAWFSFNSKDG 221 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~---~E~~a~~~a~~-~~~~~~Pv~iSf~~~~~ 221 (266)
..++++++.|++.|++|++..- .++..+++.+. +. ++||+++-.|..+
T Consensus 230 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~~--gi~VV~~Sr~~~G 281 (331)
T 1agx_A 230 DAYQAFAKAGVKAIIHAGTGNGSMANYLVPEVRKLHDEQ--GLQIVRSSRVAQG 281 (331)
T ss_dssp HHHHHHHTTTCSEEEEEEBTTTBCCTTHHHHHHHHHHTT--CCEEEEEESSCSS
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHcC--CCEEEEECCCCCC
Confidence 4567788889999999988652 34444444333 43 4899988877544
No 397
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=23.69 E-value=1.9e+02 Score=25.39 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=30.1
Q ss_pred HHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 175 LILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+.+.+.|+|++-+=......-++++++++++.+ ..|-++.+
T Consensus 97 ~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~~~~-~~~~llaV 137 (303)
T 3ru6_A 97 EEVSKLGVDMINIHASAGKIAIQEVMTRLSKFS-KRPLVLAV 137 (303)
T ss_dssp HHHHTTTCSEEEEEGGGCHHHHHHHHHHHTTSS-SCCEEEEE
T ss_pred HHHHhcCCCEEEEeccCCHHHHHHHHHHHHhcC-CCceEEEE
Confidence 456778999999988877777888888887654 23555444
No 398
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=23.69 E-value=65 Score=27.79 Aligned_cols=81 Identities=14% Similarity=0.025 Sum_probs=41.9
Q ss_pred hhHHhhhcCCCeEEeeccch----------------------hhhHHHHHHHHhhcCcccccceeeecCCCceeecCchH
Q 024544 173 RVLILANSGADLIAFETIPN----------------------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSI 230 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~~~----------------------~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~ 230 (266)
.++.|.++ +|+|-+.+=.+ ++.+...++.+|+. .++|+++- +.. +.-...|.
T Consensus 35 ~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~-~~~Pii~m-~y~-n~v~~~g~-- 108 (271)
T 1ujp_A 35 AVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL-TEKPLFLM-TYL-NPVLAWGP-- 108 (271)
T ss_dssp HHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CCSCEEEE-CCH-HHHHHHCH--
T ss_pred HHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEE-ecC-cHHHHhhH--
Confidence 56778888 99999875221 12223445556655 36898873 211 11122232
Q ss_pred HHhhhHHhhhhhhhhcccccCCcchhhhhh
Q 024544 231 LECASIADSCEQVVAVGINCTSPRFIHGLI 260 (266)
Q Consensus 231 ~~a~~~~~~~~~~~avGiNC~~p~~~~~~l 260 (266)
+..+..+.. .+++++-+.+..++....++
T Consensus 109 ~~f~~~~~~-aG~dGviv~Dl~~ee~~~~~ 137 (271)
T 1ujp_A 109 ERFFGLFKQ-AGATGVILPDLPPDEDPGLV 137 (271)
T ss_dssp HHHHHHHHH-HTCCEEECTTCCGGGCHHHH
T ss_pred HHHHHHHHH-cCCCEEEecCCCHHHHHHHH
Confidence 333343433 35666666665554444443
No 399
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti}
Probab=23.63 E-value=96 Score=28.96 Aligned_cols=40 Identities=18% Similarity=0.158 Sum_probs=25.0
Q ss_pred cccCchhHHHHhhhhhhccccEEEechhhhhhhhhhccCCCHHHH
Q 024544 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (266)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a~~~~l~~~g~~~~~~ 94 (266)
.++.|+-...+++ |-+.|||+++| |+ +..+++.|++.+.+
T Consensus 99 DLk~~eGr~~l~~--Li~~ADVvven-fR--PG~~erlGL~ye~L 138 (456)
T 3ubm_A 99 NTKTPEGKAVFEK--CIKWADILLEN-FR--PGAMERMGFTWEYL 138 (456)
T ss_dssp CTTSHHHHHHHHH--HHHHCSEEEEC-CS--TTHHHHTTCCHHHH
T ss_pred eCCCHHHHHHHHH--HHHhCCEEEEC-CC--ccHHHHhCCCHHHH
Confidence 4566664443332 33469999999 43 55677889986543
No 400
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=23.53 E-value=1.7e+02 Score=25.01 Aligned_cols=77 Identities=14% Similarity=0.137 Sum_probs=43.1
Q ss_pred HHhhhcCCCeEEeeccchhhhHHHHHHHHhhc---Ccccccceeeec---CCCcee----ecCchHHHhhhHHhh-hhhh
Q 024544 175 LILANSGADLIAFETIPNKLEAKAYAELLEEE---GITIPAWFSFNS---KDGINV----VSGDSILECASIADS-CEQV 243 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~---~~~~Pv~iSf~~---~~~~~l----~~G~~~~~a~~~~~~-~~~~ 243 (266)
+.+.+.|+|++-+=......-++++++++++. +...|-.+.++. .+...+ .-..++.+.+..+.. ....
T Consensus 77 ~~~~~~gad~vTVh~~~G~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~ 156 (259)
T 3tfx_A 77 KALAKLGITFTTVHALGGSQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHS 156 (259)
T ss_dssp HHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCEEEEcCCCCHHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHh
Confidence 34667899999998887777788888888653 212343444432 222222 112355655544332 1222
Q ss_pred hhcccccC
Q 024544 244 VAVGINCT 251 (266)
Q Consensus 244 ~avGiNC~ 251 (266)
..-|+=|+
T Consensus 157 G~dGvV~s 164 (259)
T 3tfx_A 157 GADGVICS 164 (259)
T ss_dssp TCCEEECC
T ss_pred CCCEEEEC
Confidence 34677887
No 401
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=23.50 E-value=1e+02 Score=21.22 Aligned_cols=34 Identities=6% Similarity=0.056 Sum_probs=21.3
Q ss_pred cCCCeEEeec-cchhhhHHHHHHHHhhcCcccccce
Q 024544 180 SGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 180 ~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
..+|++++.. +|... ...+++.+++..+..|+++
T Consensus 46 ~~~dlil~D~~l~~~~-g~~~~~~l~~~~~~~~ii~ 80 (120)
T 1tmy_A 46 LKPDIVTMDITMPEMN-GIDAIKEIMKIDPNAKIIV 80 (120)
T ss_dssp HCCSEEEEECSCGGGC-HHHHHHHHHHHCTTCCEEE
T ss_pred cCCCEEEEeCCCCCCc-HHHHHHHHHhhCCCCeEEE
Confidence 4689999984 45543 4455666666544567654
No 402
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=23.30 E-value=1.4e+02 Score=27.96 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=28.3
Q ss_pred hhhhHHhhhcCCCeEEeecc-chhhhHHHHHHHHhhcCcccccce
Q 024544 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
.++++.+.++|+|++.+-+- .+......+++.+++.-+++|+++
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~ 301 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIG 301 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEe
Confidence 45677788899999988443 233334455666666422588875
No 403
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=23.27 E-value=3.8e+02 Score=23.51 Aligned_cols=86 Identities=13% Similarity=0.095 Sum_probs=49.0
Q ss_pred chhHHH---HHHHhhhhhHHhhhcCCCeEEeecc----------ch-----------h-hh---HHHHHHHHhhcCcccc
Q 024544 160 AVSLET---LKEFHRRRVLILANSGADLIAFETI----------PN-----------K-LE---AKAYAELLEEEGITIP 211 (266)
Q Consensus 160 ~~~~~e---~~~~~~~qi~~l~~~gvD~i~~ET~----------~~-----------~-~E---~~a~~~a~~~~~~~~P 211 (266)
.+|.+| +.+.|.+-++...++|.|.|=+=-- |. + +. +..+++++++.- +.|
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 355555 5556666666677899998855422 11 1 12 345566666654 689
Q ss_pred cceeeecCCCceeecCchHHHhhhHHhh--hhhhhhccc
Q 024544 212 AWFSFNSKDGINVVSGDSILECASIADS--CEQVVAVGI 248 (266)
Q Consensus 212 v~iSf~~~~~~~l~~G~~~~~a~~~~~~--~~~~~avGi 248 (266)
|++-++..+- ...|.++++.+..+.. ..+++.|=+
T Consensus 212 v~vRls~~~~--~~~g~~~~~~~~la~~L~~~Gvd~i~v 248 (340)
T 3gr7_A 212 LFVRISASDY--HPDGLTAKDYVPYAKRMKEQGVDLVDV 248 (340)
T ss_dssp EEEEEESCCC--STTSCCGGGHHHHHHHHHHTTCCEEEE
T ss_pred eEEEeccccc--cCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 9988876432 2245566665554432 145665544
No 404
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=23.13 E-value=91 Score=26.83 Aligned_cols=44 Identities=14% Similarity=0.110 Sum_probs=29.5
Q ss_pred hhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceee
Q 024544 170 HRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
|.+.+..++++|.+++ +|. ..+..|++.+++++++.+ +.+++.+
T Consensus 75 h~~~~~~al~~gk~V~-~EKP~~~~~~~~~~l~~~a~~~g--~~~~~~~ 120 (325)
T 2ho3_A 75 HFAQAKAALSAGKHVI-LEKPAVSQPQEWFDLIQTAEKNN--CFIFEAA 120 (325)
T ss_dssp HHHHHHHHHHTTCEEE-EESSCCSSHHHHHHHHHHHHHTT--CCEEEEC
T ss_pred HHHHHHHHHHcCCcEE-EecCCcCCHHHHHHHHHHHHHcC--CEEEEEE
Confidence 5566666777887655 473 457788888888887754 4555444
No 405
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=23.01 E-value=3.2e+02 Score=23.90 Aligned_cols=84 Identities=6% Similarity=-0.097 Sum_probs=48.5
Q ss_pred hHHhhhcCCCeEEeeccc--------------hhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhh
Q 024544 174 VLILANSGADLIAFETIP--------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~ 239 (266)
++.|.++||+.+-+|-.. +.+|...-++++++.-.+.+++|--..+.- . ...++++++....
T Consensus 104 v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~--~--~~gldeai~Ra~a 179 (298)
T 3eoo_A 104 IRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAA--A--AEGIDAAIERAIA 179 (298)
T ss_dssp HHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTH--H--HHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhh--h--hcCHHHHHHHHHh
Confidence 566778999999999643 344544444444443223466665544322 1 2336777765542
Q ss_pred --hhhhhhcccccC-Ccchhhhhhe
Q 024544 240 --CEQVVAVGINCT-SPRFIHGLIL 261 (266)
Q Consensus 240 --~~~~~avGiNC~-~p~~~~~~l~ 261 (266)
..|+++|=+-|. +++.+..+.+
T Consensus 180 y~~AGAD~if~~~~~~~ee~~~~~~ 204 (298)
T 3eoo_A 180 YVEAGADMIFPEAMKTLDDYRRFKE 204 (298)
T ss_dssp HHHTTCSEEEECCCCSHHHHHHHHH
T ss_pred hHhcCCCEEEeCCCCCHHHHHHHHH
Confidence 246777777776 3666655544
No 406
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=23.01 E-value=95 Score=24.98 Aligned_cols=41 Identities=12% Similarity=0.167 Sum_probs=25.9
Q ss_pred hhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccce
Q 024544 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 171 ~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
.+.++.+.++|+|.|-+ +..+...++.+.+..+..+ .|++|
T Consensus 22 ~~~~~~~~~~G~~~i~l-~~~~~~~~~~i~~i~~~~~--~~l~v 62 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEI-PLNSPQWEQSIPAIVDAYG--DKALI 62 (212)
T ss_dssp HHHHHHHHHHTCCEEEE-ETTSTTHHHHHHHHHHHHT--TTSEE
T ss_pred HHHHHHHHHCCCCEEEE-eCCChhHHHHHHHHHHhCC--CCeEE
Confidence 34677788899999988 4555544444444444433 67766
No 407
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=22.92 E-value=75 Score=25.88 Aligned_cols=77 Identities=17% Similarity=0.129 Sum_probs=36.1
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCC-----ceeecC-----chHHHhhhHHhhhhhh
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-----INVVSG-----DSILECASIADSCEQV 243 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~-----~~l~~G-----~~~~~a~~~~~~~~~~ 243 (266)
++.+.++|+|.+.+-+-. +.+...+.++.+..+. ..+.+++.+..+ -.+..| .+..+.+..+.+ .++
T Consensus 92 ~~~~~~~Gad~V~i~~~~-~~~~~~~~~~~~~~g~-~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~-~G~ 168 (253)
T 1h5y_A 92 ATTLFRAGADKVSVNTAA-VRNPQLVALLAREFGS-QSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEE-LGA 168 (253)
T ss_dssp HHHHHHHTCSEEEESHHH-HHCTHHHHHHHHHHCG-GGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHH-HTC
T ss_pred HHHHHHcCCCEEEEChHH-hhCcHHHHHHHHHcCC-CcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHh-CCC
Confidence 444556799999976532 2222223334444331 123334433210 011111 344455555554 467
Q ss_pred hhcccccCCc
Q 024544 244 VAVGINCTSP 253 (266)
Q Consensus 244 ~avGiNC~~p 253 (266)
+.|.++...+
T Consensus 169 d~i~~~~~~~ 178 (253)
T 1h5y_A 169 GEILLTSIDR 178 (253)
T ss_dssp SEEEEEETTT
T ss_pred CEEEEecccC
Confidence 7888776543
No 408
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=22.89 E-value=81 Score=27.78 Aligned_cols=45 Identities=13% Similarity=0.240 Sum_probs=30.9
Q ss_pred HhhhhhHHhhhcCCCeEEeec--cchhhhHHHHHHHHhhcCcccccceee
Q 024544 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.|.+++..++++|.++|. |- -.++.|++.+++++++.+ +++++.+
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKPla~~~~e~~~l~~~a~~~g--~~~~v~~ 123 (358)
T 3gdo_A 77 LHYEHTMACIQAGKHVVM-EKPMTATAEEGETLKRAADEKG--VLLSVYH 123 (358)
T ss_dssp THHHHHHHHHHTTCEEEE-ESSCCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHcCCeEEE-ecCCcCCHHHHHHHHHHHHHcC--CeEEEee
Confidence 366667777788876654 74 467888888888887754 5555544
No 409
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=22.87 E-value=87 Score=27.57 Aligned_cols=46 Identities=13% Similarity=0.164 Sum_probs=29.8
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+++..++++|.++| +| --.+++|++.+++++++.+ +++++.+.
T Consensus 77 ~H~~~~~~al~aGkhVl-~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~~ 124 (362)
T 3fhl_A 77 THYEYAGMALEAGKNVV-VEKPFTSTTKQGEELIALAKKKG--LMLSVYQN 124 (362)
T ss_dssp GHHHHHHHHHHTTCEEE-EESSCCSSHHHHHHHHHHHHHHT--CCEEEECG
T ss_pred HHHHHHHHHHHCCCeEE-EecCCCCCHHHHHHHHHHHHHcC--CEEEEEec
Confidence 36666777777887655 46 2346778888888777754 55555543
No 410
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=22.69 E-value=90 Score=28.25 Aligned_cols=47 Identities=15% Similarity=0.141 Sum_probs=31.2
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
.|.+++..++++|..+| +| --.+++|++.+++++++.+ +++++.|..
T Consensus 122 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~v~~~~ 170 (417)
T 3v5n_A 122 VHYAAAKEFLKRGIHVI-CDKPLTSTLADAKKLKKAADESD--ALFVLTHNY 170 (417)
T ss_dssp SHHHHHHHHHTTTCEEE-EESSSCSSHHHHHHHHHHHHHCS--SCEEEECGG
T ss_pred HHHHHHHHHHhCCCeEE-EECCCcCCHHHHHHHHHHHHHcC--CEEEEEecc
Confidence 35667777777887644 57 2357778888888877754 566666543
No 411
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=22.64 E-value=85 Score=27.68 Aligned_cols=46 Identities=13% Similarity=0.187 Sum_probs=31.3
Q ss_pred HhhhhhHHhhhcCCCeEEee--ccchhhhHHHHHHHHhhcCcccccceeee
Q 024544 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 169 ~~~~qi~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
.|.+.+..++++|..+| +| --.+++|++.+++++++.+ +++++.|.
T Consensus 80 ~H~~~~~~al~aGkhVl-~EKPla~~~~e~~~l~~~a~~~g--~~~~v~~~ 127 (359)
T 3m2t_A 80 LHFEMGLLAMSKGVNVF-VEKPPCATLEELETLIDAARRSD--VVSGVGMN 127 (359)
T ss_dssp HHHHHHHHHHHTTCEEE-ECSCSCSSHHHHHHHHHHHHHHT--CCEEECCH
T ss_pred HHHHHHHHHHHCCCeEE-EECCCcCCHHHHHHHHHHHHHcC--CEEEEEec
Confidence 46667777778887755 47 2356778888888887755 55555553
No 412
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=22.58 E-value=1.9e+02 Score=25.09 Aligned_cols=62 Identities=23% Similarity=0.387 Sum_probs=36.4
Q ss_pred ceEEEEecccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhcCCCeEEeec---cch------hhhHHHHHHHH
Q 024544 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPN------KLEAKAYAELL 203 (266)
Q Consensus 133 ~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~gvD~i~~ET---~~~------~~E~~a~~~a~ 203 (266)
+.+|.|=|--+.+++.||+.| .+.+++.+ +++.+++.|+|+|=+-- -|. .+|++.++.++
T Consensus 5 ~~~imgilN~TpDSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi 73 (280)
T 1eye_A 5 PVQVMGVLNVTDDSFSDGGCY-------LDLDDAVK----HGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVV 73 (280)
T ss_dssp CCEEEEEEECSCCTTCSSCCC-------CSHHHHHH----HHHHHHHTTCSEEEEECC--------------HHHHHHHH
T ss_pred CcEEEEEEeCCCCCcCCCccc-------CCHHHHHH----HHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHH
Confidence 457888777777777776433 24455444 56778889999995543 233 56666666555
Q ss_pred hh
Q 024544 204 EE 205 (266)
Q Consensus 204 ~~ 205 (266)
+.
T Consensus 74 ~~ 75 (280)
T 1eye_A 74 KE 75 (280)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 413
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=22.58 E-value=3.5e+02 Score=22.87 Aligned_cols=52 Identities=10% Similarity=0.028 Sum_probs=32.7
Q ss_pred HHHHHHHhhhhhHHhhhcCCCeEEeeccchhh------h----HHHHHHHHhhcCccccccee
Q 024544 163 LETLKEFHRRRVLILANSGADLIAFETIPNKL------E----AKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 163 ~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~------E----~~a~~~a~~~~~~~~Pv~iS 215 (266)
.+...++.+..++.+.+ ..+++.+|.+..+. + ++.+++++|+..++.|+++.
T Consensus 116 ~~~~~~~~~~ia~~~~~-~~~vv~~~l~NEP~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~ 177 (320)
T 3nco_A 116 GPVLVEIWKQVAQAFKD-YPDKLFFEIFNEPAQNLTPTKWNELYPKVLGEIRKTNPSRIVIID 177 (320)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTEEEECCSCCCTTSCHHHHHHHHHHHHHHHHHHCSSCCEEEE
T ss_pred HHHHHHHHHHHHHHHcC-CCceEEEEeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEC
Confidence 44555666666666654 34678888886543 1 45666778877666666654
No 414
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=22.49 E-value=1e+02 Score=26.36 Aligned_cols=40 Identities=13% Similarity=-0.007 Sum_probs=29.1
Q ss_pred hhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccc
Q 024544 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~ 213 (266)
.+++.+.+.++|.|++= .+..++..+++.+++.+...|++
T Consensus 195 ~~~~~l~~~~~d~v~~~--~~~~~a~~~~~~~~~~g~~~~~~ 234 (366)
T 3td9_A 195 AQLSVAMSFNPDAIYIT--GYYPEIALISRQARQLGFTGYIL 234 (366)
T ss_dssp HHHHHHHHTCCSEEEEC--SCHHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHhcCCCEEEEc--cchhHHHHHHHHHHHcCCCceEE
Confidence 35566667899999873 34567888889999887666654
No 415
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=22.41 E-value=1.9e+02 Score=26.18 Aligned_cols=28 Identities=14% Similarity=0.302 Sum_probs=25.0
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEee
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFE 188 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~E 188 (266)
.+.+++.+.|++|++...+.|...|+.-
T Consensus 130 ~~l~~V~~AY~EQ~~~Ve~~G~~~ILMA 157 (396)
T 4dnh_A 130 VSIDDILAAYESQIEAIEAEGGRIILMA 157 (396)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHcCCeEEEeh
Confidence 4789999999999999999999999843
No 416
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=22.40 E-value=1.2e+02 Score=26.53 Aligned_cols=77 Identities=10% Similarity=-0.006 Sum_probs=39.7
Q ss_pred HHHHHhhhhhHHhhhcCCCeEEeec----------cchhhhHHHHHHHHhhc--------CcccccceeeecCCCceeec
Q 024544 165 TLKEFHRRRVLILANSGADLIAFET----------IPNKLEAKAYAELLEEE--------GITIPAWFSFNSKDGINVVS 226 (266)
Q Consensus 165 e~~~~~~~qi~~l~~~gvD~i~~ET----------~~~~~E~~a~~~a~~~~--------~~~~Pv~iSf~~~~~~~l~~ 226 (266)
+..+.|...++.+.+ |+|.|-+-- +.+...+..+++++++. +.++|+++-++..- +
T Consensus 150 ~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~-----~ 223 (336)
T 1f76_A 150 QGKDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDL-----S 223 (336)
T ss_dssp GTHHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCC-----C
T ss_pred ccHHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCC-----C
Confidence 444556556665554 899875532 11223344566666553 22589998765320 1
Q ss_pred CchHHHhhhHHhhhhhhhhccc
Q 024544 227 GDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 227 G~~~~~a~~~~~~~~~~~avGi 248 (266)
-+.+.+.+..+.+ .++++|-+
T Consensus 224 ~~~~~~~a~~l~~-~Gvd~i~v 244 (336)
T 1f76_A 224 EEELIQVADSLVR-HNIDGVIA 244 (336)
T ss_dssp HHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHHHHHHHH-cCCcEEEE
Confidence 1123334444444 46676554
No 417
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=22.39 E-value=63 Score=23.28 Aligned_cols=38 Identities=18% Similarity=0.170 Sum_probs=24.2
Q ss_pred hhcCCCeEEeecc-chh-hhHHHHHHHHhhcCccccccee
Q 024544 178 ANSGADLIAFETI-PNK-LEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 178 ~~~gvD~i~~ET~-~~~-~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
.+..+|++++... |.- .....+++.+++..+..|+++-
T Consensus 47 ~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~ 86 (136)
T 3kto_A 47 ISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVM 86 (136)
T ss_dssp CCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEE
T ss_pred hccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEE
Confidence 3456899999854 440 3455666677776556777643
No 418
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=22.36 E-value=75 Score=27.51 Aligned_cols=19 Identities=21% Similarity=0.300 Sum_probs=14.8
Q ss_pred hhhhhHHhhhcCCCeEEee
Q 024544 170 HRRRVLILANSGADLIAFE 188 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~E 188 (266)
..+.++.|.++|+|+|=+-
T Consensus 36 ~~~~~~~l~~~GaD~iElG 54 (271)
T 3nav_A 36 SLAIMQTLIDAGADALELG 54 (271)
T ss_dssp HHHHHHHHHHTTCSSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEC
Confidence 3446788889999999766
No 419
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=22.26 E-value=86 Score=26.70 Aligned_cols=42 Identities=12% Similarity=0.145 Sum_probs=29.5
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccc
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~ 213 (266)
|..+++.+.+.++|.+++= .+..++..+++.+++.+...|++
T Consensus 182 ~~~~~~~l~~~~~d~v~~~--~~~~~a~~~~~~~~~~g~~~~~~ 223 (356)
T 3ipc_A 182 FSALISKMKEAGVSIIYWG--GLHTEAGLIIRQAADQGLKAKLV 223 (356)
T ss_dssp CHHHHHHHHHTTCCEEEEE--SCHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHhcCCCEEEEc--cCchHHHHHHHHHHHCCCCCcEE
Confidence 3445666777889999863 34456778888888887667754
No 420
>1nth_A Monomethylamine methyltransferase MTMB1; TIM barrel; HET: BGX; 1.55A {Methanosarcina barkeri} SCOP: c.1.25.1 PDB: 1l2q_A* 1tv2_A* 1tv3_A* 1tv4_A*
Probab=22.21 E-value=1.2e+02 Score=28.20 Aligned_cols=16 Identities=19% Similarity=0.196 Sum_probs=11.9
Q ss_pred ccccceEEEEecccccce
Q 024544 129 ISSRPVLVAASVGSYGAY 146 (266)
Q Consensus 129 ~~~~~~~VaGsiGP~g~~ 146 (266)
.+.++++|.| ||.|..
T Consensus 119 ~D~~~Pvi~G--Gp~G~p 134 (458)
T 1nth_A 119 GDKAKPIVQG--GPTGSP 134 (458)
T ss_dssp TCSSCCEEEE--SCTTCE
T ss_pred CCCCCCeEec--CCCCCC
Confidence 3456788888 898874
No 421
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=22.16 E-value=1.4e+02 Score=25.02 Aligned_cols=84 Identities=14% Similarity=0.106 Sum_probs=0.0
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecCCCceeec-------CchHHHhhhHHhh-hhhhhh
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVS-------GDSILECASIADS-CEQVVA 245 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~-------G~~~~~a~~~~~~-~~~~~a 245 (266)
++.+.+.|+|++-+=......-++.+++.+++.+...|-.+.++........+ + +..+.+..+.. ..+..+
T Consensus 85 i~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~-~~~d~Vl~ma~~~~~~G~ 163 (245)
T 1eix_A 85 VAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTL-SPADYAERLAALTQKCGL 163 (245)
T ss_dssp HHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCS-CHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCC-CHHHHHHHHHHHHHHcCC
Q ss_pred cccccCCcchhhhh
Q 024544 246 VGINCTSPRFIHGL 259 (266)
Q Consensus 246 vGiNC~~p~~~~~~ 259 (266)
.|+-|...+ +..+
T Consensus 164 ~g~V~~~~e-i~~l 176 (245)
T 1eix_A 164 DGVVCSAQE-AVRF 176 (245)
T ss_dssp SEEECCGGG-HHHH
T ss_pred CeEEeCHHH-HHHH
No 422
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=22.09 E-value=92 Score=27.41 Aligned_cols=43 Identities=12% Similarity=0.257 Sum_probs=31.6
Q ss_pred hhHHhhhcCCCeEEeeccch---hhhHHHHHHHHhhcCcccccceee
Q 024544 173 RVLILANSGADLIAFETIPN---KLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~~~---~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
.++.+.++|.|.|++-|..- .+.+..++.++|+.. ++|+++-|
T Consensus 58 ~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~-~lPvil~f 103 (286)
T 3vk5_A 58 KAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAAT-PLPVVLHF 103 (286)
T ss_dssp HHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHC-SSCEEEEC
T ss_pred HHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhC-CCCEEEEC
Confidence 56667789999999995422 345778888898843 59999844
No 423
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=22.06 E-value=87 Score=22.37 Aligned_cols=34 Identities=6% Similarity=0.203 Sum_probs=21.4
Q ss_pred cCCCeEEeec-cchhhhHHHHHHHHhhcCcccccce
Q 024544 180 SGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 180 ~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
..+|++++.. +|... ...+++.+++..+..|+++
T Consensus 48 ~~~dlvilD~~lp~~~-g~~~~~~l~~~~~~~~ii~ 82 (133)
T 3b2n_A 48 YNPNVVILDIEMPGMT-GLEVLAEIRKKHLNIKVII 82 (133)
T ss_dssp HCCSEEEECSSCSSSC-HHHHHHHHHHTTCSCEEEE
T ss_pred cCCCEEEEecCCCCCC-HHHHHHHHHHHCCCCcEEE
Confidence 4689999984 45543 3455666666444677764
No 424
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=22.05 E-value=82 Score=25.76 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=25.1
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcC
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEG 207 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~ 207 (266)
++.+.++|+|++.+=..+..+.++.+++.+++.+
T Consensus 76 ~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g 109 (218)
T 3jr2_A 76 SRMAFEAGADWITVSAAAHIATIAACKKVADELN 109 (218)
T ss_dssp HHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhC
Confidence 3667789999998877665444677777777765
No 425
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=22.04 E-value=96 Score=22.28 Aligned_cols=35 Identities=9% Similarity=0.062 Sum_probs=22.2
Q ss_pred cCCCeEEeeccchhhhHHHHHHHHhhcCcccccce
Q 024544 180 SGADLIAFETIPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 180 ~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
..+|+++++..-.-.....+++.+++..+..|+++
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 82 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVII 82 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEE
Confidence 56899999854333344556666666555677664
No 426
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=21.98 E-value=1.1e+02 Score=20.58 Aligned_cols=36 Identities=14% Similarity=0.003 Sum_probs=22.0
Q ss_pred cCCCeEEeeccchhhhHHHHHHHHhhcC--ccccccee
Q 024544 180 SGADLIAFETIPNKLEAKAYAELLEEEG--ITIPAWFS 215 (266)
Q Consensus 180 ~gvD~i~~ET~~~~~E~~a~~~a~~~~~--~~~Pv~iS 215 (266)
..+|++++.....-.+...+++.+++.. +..|+++-
T Consensus 44 ~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~ 81 (119)
T 2j48_A 44 LQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLF 81 (119)
T ss_dssp HCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEE
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEE
Confidence 4689999985433334455666677653 45777643
No 427
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=21.96 E-value=96 Score=27.74 Aligned_cols=14 Identities=50% Similarity=0.489 Sum_probs=10.5
Q ss_pred hHHhhhcCCCeEEe
Q 024544 174 VLILANSGADLIAF 187 (266)
Q Consensus 174 i~~l~~~gvD~i~~ 187 (266)
++.+.++|||+|.+
T Consensus 175 A~~a~~aGaD~I~v 188 (351)
T 2c6q_A 175 VEELILSGADIIKV 188 (351)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHhCCCEEEE
Confidence 34567799999966
No 428
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=21.77 E-value=3.7e+02 Score=22.75 Aligned_cols=52 Identities=12% Similarity=0.118 Sum_probs=34.8
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhh------------HHHHHHHHhhcCccccccee
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLE------------AKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E------------~~a~~~a~~~~~~~~Pv~iS 215 (266)
..++..++.+..++.+.+.. .++ +|.+....- ++.++.++|+.+++.|+++.
T Consensus 111 ~~~~~~~~w~~ia~r~~~~~-~Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~ 174 (303)
T 7a3h_A 111 YKEEAKDFFDEMSELYGDYP-NVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVG 174 (303)
T ss_dssp THHHHHHHHHHHHHHHTTCT-TEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCC-eEE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEe
Confidence 45677888888888887643 455 888764431 35677788887666666654
No 429
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=21.74 E-value=46 Score=29.51 Aligned_cols=27 Identities=19% Similarity=0.390 Sum_probs=23.6
Q ss_pred cccCchhHHHHhhhhhhccccEEEech
Q 024544 50 LVSSPHLVRKVHLDYLDAGANIIITAS 76 (266)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnT 76 (266)
+|++.+.|++.-+--++||||-|.|.|
T Consensus 161 ~Lt~~e~i~~A~~ia~~AGADFVKTST 187 (297)
T 4eiv_A 161 ELQGGDIISRAAVAALEGGADFLQTSS 187 (297)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEcCC
Confidence 567888888888888999999999999
No 430
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=21.73 E-value=4.5e+02 Score=23.74 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=14.8
Q ss_pred hHHHHhhhh-------hhccccEEEech
Q 024544 56 LVRKVHLDY-------LDAGANIIITAS 76 (266)
Q Consensus 56 ~V~~iH~~Y-------l~AGAdiI~TnT 76 (266)
-|.++-++| .+||.|.|.-|-
T Consensus 165 eI~~ii~~f~~AA~~a~~AGfDgVEIh~ 192 (402)
T 2hsa_B 165 EISQVVEDYRRSALNAIEAGFDGIEIHG 192 (402)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 455666666 457999999775
No 431
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=21.73 E-value=56 Score=27.36 Aligned_cols=30 Identities=17% Similarity=0.198 Sum_probs=26.0
Q ss_pred cccCchhHHHHhhhhhhccccEEEechhhh
Q 024544 50 LVSSPHLVRKVHLDYLDAGANIIITASYQA 79 (266)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~a 79 (266)
+.+.|+.+...-+.|.++|||+|+.+.|..
T Consensus 63 l~Dip~t~~~~~~~~~~~Gad~vtvH~~~g 92 (239)
T 1dbt_A 63 LHDIPTTVNKAMKRLASLGVDLVNVHAAGG 92 (239)
T ss_dssp ECSCHHHHHHHHHHHHTTTCSEEEEEGGGC
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEeCcCC
Confidence 348899999888999999999999988864
No 432
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=21.65 E-value=1.1e+02 Score=21.78 Aligned_cols=37 Identities=5% Similarity=0.078 Sum_probs=22.6
Q ss_pred hcCCCeEEeeccchhhhHHHHHHHHhh--cCccccccee
Q 024544 179 NSGADLIAFETIPNKLEAKAYAELLEE--EGITIPAWFS 215 (266)
Q Consensus 179 ~~gvD~i~~ET~~~~~E~~a~~~a~~~--~~~~~Pv~iS 215 (266)
+..+|++++.....-.+...+++.+++ ..+..|+++-
T Consensus 52 ~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~ 90 (143)
T 3cnb_A 52 TVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAM 90 (143)
T ss_dssp HTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEE
T ss_pred hcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEE
Confidence 456899999854323344566666776 3345676643
No 433
>4e4r_A Phosphate acetyltransferase; structural genomics, EUTD, center for structural genomics of infectious diseases, csgid; HET: TRS; 1.44A {Staphylococcus aureus subsp}
Probab=21.64 E-value=1.2e+02 Score=27.04 Aligned_cols=123 Identities=13% Similarity=0.075 Sum_probs=64.4
Q ss_pred CCchhHHHHHHHh----cCCeEEeecchhhhHhhhCCCCCCccccccccccCchhHHHHhhhhh--hccccEEEechhhh
Q 024544 6 NGTTSFMTDFLQK----CGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYL--DAGANIIITASYQA 79 (266)
Q Consensus 6 ~~~~~~l~~~l~~----~~~~lllDGg~gT~L~~~g~~~~~~lws~~~ll~~Pe~V~~iH~~Yl--~AGAdiI~TnTy~a 79 (266)
|.|-+.|+..+.+ .+++.+-+|.=-..|+.--.-.... .....|+-+|+.|++.-+++= ..+.+||-+.+.-.
T Consensus 2 ~~mm~~~~~l~~~ak~~~kriv~~eg~d~~vl~Aa~~a~~eg-~~~~iLvG~~~~I~~~~~~~g~~~~~~eIi~~~~~~~ 80 (331)
T 4e4r_A 2 NAMADLLNVLKDKLSGKNVKIVLPEGEDERVLTAATQLQATD-YVTPIVLGDETKVQSLAQKLNLDISNIELINPATSEL 80 (331)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEECCTTSHHHHHHHHHHHTSS-SEEEEEESCHHHHHHHHHHTTCCCTTSEEECGGGCTT
T ss_pred chHHHHHHHHHHHHhhCCCEEEEecCCCHHHHHHHHHHHHcC-CcEEEEECCHHHHHHHHHHcCCCcccCEEEcCCChhH
Confidence 4454455555543 2457777776655555431101111 122346788998888766541 13677887776521
Q ss_pred ------hhhhh-hccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccccceEEEEecccccceec
Q 024544 80 ------TIQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLA 148 (266)
Q Consensus 80 ------~~~~l-~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~ 148 (266)
....+ ++.| +.+.+++..+...-+|-..+.. ..-..+|.|.+|.+|+.+.
T Consensus 81 ~~~~~~~~~~lr~~kg-~~~~A~~~~~~s~~~a~~lV~~------------------G~ADa~vsG~~~~T~~~l~ 137 (331)
T 4e4r_A 81 KAELVQSFVERRKGKT-TEEQAQELLNNVNYFGTMLVYA------------------GKADGLVSGAAHSTGDTVR 137 (331)
T ss_dssp HHHHHHHHHHHTTTSS-CHHHHHHHTTSHHHHHHHHHHT------------------TSCSEEEECSSTTCCCTHH
T ss_pred HHHHHHHHHHHHcCCC-CHHHHHHHhcccHHHHHHHHHC------------------CCCcEEEeCCCCCHHHHHH
Confidence 11122 2335 5444444333333344444321 3347899999999887654
No 434
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=21.61 E-value=1.2e+02 Score=27.17 Aligned_cols=65 Identities=2% Similarity=-0.122 Sum_probs=37.4
Q ss_pred hhhHHhhhc--CCCeEEeecc-chhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhhccc
Q 024544 172 RRVLILANS--GADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (266)
Q Consensus 172 ~qi~~l~~~--gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~avGi 248 (266)
++++.+.+. |+|++.+.+- .+.......++.+++..+++|+++.. ..+.+++...++ .++++|-+
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~----------v~t~e~A~~a~~--aGaD~I~v 188 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGN----------VVTGEMVEELIL--SGADIIKV 188 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHHHHH--TTCSEEEE
T ss_pred HHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEe----------CCCHHHHHHHHH--hCCCEEEE
Confidence 356667766 9999887643 33444556666676643257877532 234555544333 36666533
No 435
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=21.58 E-value=4.6e+02 Score=23.84 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=13.6
Q ss_pred hhhhhHHhhh-cCCCeEEe
Q 024544 170 HRRRVLILAN-SGADLIAF 187 (266)
Q Consensus 170 ~~~qi~~l~~-~gvD~i~~ 187 (266)
+.+.++.|.+ +|+|+|-+
T Consensus 266 ~~~la~~L~~~~Gvd~I~v 284 (419)
T 3l5a_A 266 FNQLIDWVMDVSNIQYLAI 284 (419)
T ss_dssp HHHHHHHHHHHSCCCCEEE
T ss_pred HHHHHHHHHhhcCCcEEEE
Confidence 3446778888 99999865
No 436
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=21.45 E-value=84 Score=26.80 Aligned_cols=39 Identities=13% Similarity=0.251 Sum_probs=28.8
Q ss_pred hhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccc
Q 024544 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~ 213 (266)
+++.+.+.++|.|++= .+..++..+++++++.+.+.|++
T Consensus 186 ~~~~l~~~~~d~i~~~--~~~~~a~~~~~~~~~~g~~~p~~ 224 (358)
T 3hut_A 186 VIDEIEDEAPQAIYLA--MAYEDAAPFLRALRARGSALPVY 224 (358)
T ss_dssp HHHHHHHHCCSEEEEE--SCHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHhcCCCEEEEc--cCchHHHHHHHHHHHcCCCCcEE
Confidence 4556666789998874 34567888899999888767754
No 437
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=21.38 E-value=1e+02 Score=26.27 Aligned_cols=44 Identities=16% Similarity=0.051 Sum_probs=32.0
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCccccccee
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
|..++..+.++++|.|++=. ...++..+++.+++.+.+.|++.+
T Consensus 185 ~~~~l~~i~~~~~d~v~~~~--~~~~~~~~~~~~~~~g~~~~~~~~ 228 (353)
T 4gnr_A 185 FQAALTKMKGKDFDAIVVPG--YYNEAGKIVNQARGMGIDKPIVGG 228 (353)
T ss_dssp CHHHHHHHHTSCCSEEECCS--CHHHHHHHHHHHHHTTCCSCEEEC
T ss_pred HHHHHHHHHhcCCCEEEEec--CcHHHHHHHHHHHHcCCCCcEEEe
Confidence 45577888889999998643 446778888888887765665433
No 438
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=21.31 E-value=1.2e+02 Score=28.70 Aligned_cols=51 Identities=18% Similarity=0.139 Sum_probs=37.1
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
++..+..+ +...++.|||+|.+=-+.+.++++.+.+.+++.+.+++++.-+
T Consensus 190 ltekD~~d-----l~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKI 240 (499)
T 3hqn_D 190 VSAKDRVD-----LQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKI 240 (499)
T ss_dssp SCHHHHHH-----HHHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEE
T ss_pred CCHHHHHH-----HHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 45544444 4556778999999999999999999999887755445555433
No 439
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=21.28 E-value=74 Score=28.69 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=19.6
Q ss_pred ccccceeeecCCCceeecCchHHH---hhhHHhh--hhhhhhcccccCCc
Q 024544 209 TIPAWFSFNSKDGINVVSGDSILE---CASIADS--CEQVVAVGINCTSP 253 (266)
Q Consensus 209 ~~Pv~iSf~~~~~~~l~~G~~~~~---a~~~~~~--~~~~~avGiNC~~p 253 (266)
+.|+++++. |.++++ +++.+.. ..++++|=|||+.|
T Consensus 126 ~~pvivsI~---------G~~~~d~~~~a~~l~~~~~~g~d~ielNisCP 166 (354)
T 4ef8_A 126 KKPLFLSMS---------GLSMRENVEMCKRLAAVATEKGVILELNLSCP 166 (354)
T ss_dssp TCCEEEEEC---------CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSC
T ss_pred CCcEEEEec---------cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCC
Confidence 467777763 333333 3333331 13567777888755
No 440
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=21.11 E-value=73 Score=27.27 Aligned_cols=32 Identities=9% Similarity=0.121 Sum_probs=28.0
Q ss_pred hhHHhhhcCCCeEEeeccchhhhHHHHHHHHh
Q 024544 173 RVLILANSGADLIAFETIPNKLEAKAYAELLE 204 (266)
Q Consensus 173 qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~ 204 (266)
+++.+++.|+|.|++=-+.+.+|++.++++++
T Consensus 82 ~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~ 113 (267)
T 2vws_A 82 LIKQVLDIGAQTLLIPMVDTAEQARQVVSATR 113 (267)
T ss_dssp HHHHHHHTTCCEEEECCCCSHHHHHHHHHHTS
T ss_pred HHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHc
Confidence 45667789999999999999999999998875
No 441
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=21.11 E-value=3.6e+02 Score=23.84 Aligned_cols=28 Identities=18% Similarity=0.078 Sum_probs=22.0
Q ss_pred cCCCeEEeeccchhhhHHHHHHHHhhcC
Q 024544 180 SGADLIAFETIPNKLEAKAYAELLEEEG 207 (266)
Q Consensus 180 ~gvD~i~~ET~~~~~E~~a~~~a~~~~~ 207 (266)
.|+|+.--|.-....+.+.+++.+++.+
T Consensus 166 vG~dL~g~E~~~~~~~~~~~~~~A~~~g 193 (343)
T 3rys_A 166 AGIGLDSAEVGNPPSKFERLYQRAAEAG 193 (343)
T ss_dssp CEEEEESCCTTCCGGGGHHHHHHHHHTT
T ss_pred EEEecCCcccCCCHHHHHHHHHHHHHCC
Confidence 3568888887777888888888888765
No 442
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=21.04 E-value=1.3e+02 Score=25.88 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=36.1
Q ss_pred hhHHHHHHHhhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccce
Q 024544 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
.+..++.+ .++.+.+.+|..|++|...+..-++.+.+.+++.+ .|+.+
T Consensus 196 ps~~~l~~----l~~~ik~~~v~~if~e~~~~~~~~~~l~~~a~~~g--~~v~~ 243 (282)
T 3mfq_A 196 VANSDMIE----TVNLIIDHNIKAIFTESTTNPERMKKLQEAVKAKG--GQVEV 243 (282)
T ss_dssp CCHHHHHH----HHHHHHHHTCCEEECBTTSCTHHHHHHHHHHHTTS--CCCEE
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEEeCCCChHHHHHHHHHHHhcC--CceEE
Confidence 34555444 44556678999999999998888888888888876 66654
No 443
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=21.03 E-value=3e+02 Score=23.37 Aligned_cols=77 Identities=13% Similarity=0.105 Sum_probs=44.2
Q ss_pred HHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeec---CCCceee---cCchHHHhhhHHhh-hhhhhhcc
Q 024544 175 LILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNS---KDGINVV---SGDSILECASIADS-CEQVVAVG 247 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~---~~~~~l~---~G~~~~~a~~~~~~-~~~~~avG 247 (266)
+.+.+.|+|++-+=...-..-++++++++++.+.+.|-++.+++ .++..+. -+.++.+.+..+.. .......|
T Consensus 99 ~~~~~~gaD~vTVh~~~G~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~~~~~~~~V~~~A~~a~~aG~~G 178 (255)
T 3ldv_A 99 KAAAELGVWMVNVHASGGERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAPQDHVLRLATLTKNAGLDG 178 (255)
T ss_dssp HHHHHTTCSEEEEEGGGCHHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHhcCCCEEEEeccCCHHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCE
Confidence 34667899999988777777788888888764323454444332 2222221 13455555544432 12223567
Q ss_pred cccC
Q 024544 248 INCT 251 (266)
Q Consensus 248 iNC~ 251 (266)
+=|+
T Consensus 179 vV~s 182 (255)
T 3ldv_A 179 VVCS 182 (255)
T ss_dssp EECC
T ss_pred EEEC
Confidence 8887
No 444
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=21.02 E-value=3.4e+02 Score=22.11 Aligned_cols=41 Identities=27% Similarity=0.247 Sum_probs=25.9
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEeecc----------chhhhHHHHHHHH
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAFETI----------PNKLEAKAYAELL 203 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~ET~----------~~~~E~~a~~~a~ 203 (266)
..+.+.+..++.++...+.||. |.+|++ .+..++..+++.+
T Consensus 125 ~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~n~~~~~~~~~~~~~~~~~l~~~v 175 (269)
T 3ngf_A 125 CEETFIENFRYAADKLAPHGIT-VLVEPLNTRNMPGYFIVHQLEAVGLVKRV 175 (269)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCE-EEECCCCTTTSTTBSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCE-EEEeeCCcccCccchhcCHHHHHHHHHHh
Confidence 4556666677666767778996 566974 3455555555544
No 445
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=21.01 E-value=1.4e+02 Score=27.60 Aligned_cols=40 Identities=18% Similarity=0.231 Sum_probs=23.2
Q ss_pred HHhhhcCCCeEEeec---------------cchhhhHHHHHHHHhhcCcccccceee
Q 024544 175 LILANSGADLIAFET---------------IPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET---------------~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+.+.++|+|+|.+-. .|...-+..+.++++.. ++||+.+-
T Consensus 293 ~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~--~ipvia~G 347 (494)
T 1vrd_A 293 EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKY--DVPIIADG 347 (494)
T ss_dssp HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTT--TCCEEEES
T ss_pred HHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhc--CCCEEEEC
Confidence 456679999998711 34443333444444432 48888654
No 446
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=20.98 E-value=60 Score=20.72 Aligned_cols=20 Identities=25% Similarity=0.542 Sum_probs=15.2
Q ss_pred hHHHHhhhhhh-------ccccEEEec
Q 024544 56 LVRKVHLDYLD-------AGANIIITA 75 (266)
Q Consensus 56 ~V~~iH~~Yl~-------AGAdiI~Tn 75 (266)
.++++|++... ..||+|+||
T Consensus 22 ~~R~~~~e~a~~~m~~~Vp~AdvVitN 48 (48)
T 3c01_A 22 KRREVHMEILSEQVKSDIENSRLIVAN 48 (48)
T ss_pred HHHHHHHHHHHhHHHhcCCCCCEeecC
Confidence 57777877775 368999987
No 447
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=20.93 E-value=2.6e+02 Score=23.56 Aligned_cols=46 Identities=7% Similarity=0.000 Sum_probs=29.2
Q ss_pred chhHHHHHHHhhhhhHHhh-hcCCCeEEeeccchhhhHHHHHHHHhhc
Q 024544 160 AVSLETLKEFHRRRVLILA-NSGADLIAFETIPNKLEAKAYAELLEEE 206 (266)
Q Consensus 160 ~~~~~e~~~~~~~qi~~l~-~~gvD~i~~ET~~~~~E~~a~~~a~~~~ 206 (266)
.++.+++.++.+.. ..+. -..+|.+..-.+++...+..+.++++..
T Consensus 56 ~~~~~~~~~~~~~~-~~~~~l~~~d~v~~G~l~~~~~~~~v~~~l~~~ 102 (289)
T 3pzs_A 56 VMPASHLTDIVQGI-ADIDRLKDCDAVLSGYIGSPEQGSHILAAVAQV 102 (289)
T ss_dssp ECCHHHHHHHHHHH-HHTTCGGGCCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH-HhcCCccCCCEEEECCCCCHHHHHHHHHHHHHH
Confidence 35556665544322 2210 0368999999999988888887777653
No 448
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=20.87 E-value=70 Score=26.97 Aligned_cols=44 Identities=11% Similarity=0.111 Sum_probs=24.9
Q ss_pred hhhcCCCeE-----EeeccchhhhHHHHHHHHhhcCcccccceeeecCCC
Q 024544 177 LANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG 221 (266)
Q Consensus 177 l~~~gvD~i-----~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~ 221 (266)
+.+.|+|++ +++.. +..++...+..+++...++|+++++....+
T Consensus 26 ~~~~~~D~vElRvD~l~~~-~~~~v~~~~~~lr~~~~~~PiI~T~R~~~e 74 (238)
T 1sfl_A 26 HRIDAIDVLELRIDQFENV-TVDQVAEMITKLKVMQDSFKLLVTYRTKLQ 74 (238)
T ss_dssp HTTTTCSEEEEECTTSTTC-CHHHHHHHHHHHC---CCSEEEEECCBGGG
T ss_pred hhhcCCCEEEEEecccccC-CHHHHHHHHHHHHHhccCCCEEEEeecccc
Confidence 334455554 23443 466677777777764325899999976543
No 449
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=20.86 E-value=4.7e+02 Score=23.64 Aligned_cols=30 Identities=23% Similarity=0.310 Sum_probs=25.2
Q ss_pred ccccCchhHHHHhhhhhhccccEEEechhh
Q 024544 49 CLVSSPHLVRKVHLDYLDAGANIIITASYQ 78 (266)
Q Consensus 49 ~ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy~ 78 (266)
+-+++++...++-+.--++||++|.--+|.
T Consensus 150 csves~e~a~~~a~~~k~aGa~~vk~q~fk 179 (385)
T 3nvt_A 150 CSVESYEQVAAVAESIKAKGLKLIRGGAFK 179 (385)
T ss_dssp SBCCCHHHHHHHHHHHHHTTCCEEECBSSC
T ss_pred CCcCCHHHHHHHHHHHHHcCCCeEEccccc
Confidence 345788888888888889999999988885
No 450
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=20.71 E-value=1.8e+02 Score=25.15 Aligned_cols=26 Identities=19% Similarity=0.095 Sum_probs=19.7
Q ss_pred CchhHHHHhhhhhhccccEEEechhh
Q 024544 53 SPHLVRKVHLDYLDAGANIIITASYQ 78 (266)
Q Consensus 53 ~Pe~V~~iH~~Yl~AGAdiI~TnTy~ 78 (266)
..+...++-+.-.++|.++|+.-.|.
T Consensus 28 ~~e~k~~i~~~L~~~Gv~~IE~g~~~ 53 (302)
T 2ftp_A 28 EVADKIRLVDDLSAAGLDYIEVGSFV 53 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CHHHHHHHHHHHHHcCcCEEEECCCc
Confidence 45666677777788999999987654
No 451
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=20.62 E-value=1.1e+02 Score=24.37 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=25.6
Q ss_pred HHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 175 LILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 175 ~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
+.+.++|+|++.+=-.+...+++.+++.+++.+ .++.+++
T Consensus 71 ~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g--~~~gv~~ 110 (207)
T 3ajx_A 71 DIAFKAGADLVTVLGSADDSTIAGAVKAAQAHN--KGVVVDL 110 (207)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEEC
T ss_pred HHHHhCCCCEEEEeccCChHHHHHHHHHHHHcC--CceEEEE
Confidence 556678999997644444456667777777654 4544444
No 452
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=20.58 E-value=99 Score=27.82 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=34.6
Q ss_pred hhhhhHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeec
Q 024544 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (266)
Q Consensus 170 ~~~qi~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~ 218 (266)
|.+.+..++++|.++|. |-=-+.+|++.+++++++.+ +++++.+..
T Consensus 83 ~~~~a~~al~aGkhVl~-EKPl~~~ea~~l~~~A~~~g--~~~~v~~~y 128 (372)
T 4gmf_A 83 GTQLARHFLARGVHVIQ-EHPLHPDDISSLQTLAQEQG--CCYWINTFY 128 (372)
T ss_dssp HHHHHHHHHHTTCEEEE-ESCCCHHHHHHHHHHHHHHT--CCEEEECSG
T ss_pred HHHHHHHHHHcCCcEEE-ecCCCHHHHHHHHHHHHHcC--CEEEEcCcc
Confidence 45667778888987665 64336889999999999876 788877754
No 453
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=20.51 E-value=4.2e+02 Score=22.98 Aligned_cols=82 Identities=23% Similarity=0.251 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCccccceEEEEecccccceecCCCccccCCCCchhHHHHHHHhhhhhHHhhhc
Q 024544 101 SVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANS 180 (266)
Q Consensus 101 av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~gseY~g~y~~~~~~~e~~~~~~~qi~~l~~~ 180 (266)
|++|.+.+++.+ +....|.+..=|.|- ...+ +.+.-.++.++.++ +
T Consensus 127 a~~Lv~~ir~~~------------------g~~f~igvA~yPE~H----------p~~~--~~~~d~~~Lk~Kv~----a 172 (310)
T 3apt_A 127 AAELVALIRERY------------------GDRVSVGGAAYPEGH----------PESE--SLEADLRHFKAKVE----A 172 (310)
T ss_dssp HHHHHHHHHHHH------------------GGGSEEEEEECTTCC----------TTSS--CHHHHHHHHHHHHH----H
T ss_pred HHHHHHHHHHhC------------------CCCeEEEEEeCCCcC----------CCCC--CHHHHHHHHHHHHH----c
Q ss_pred CCCeEEeeccchhhhHHHHHHHHhhcCcccccceee
Q 024544 181 GADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (266)
Q Consensus 181 gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf 216 (266)
|+|+++==-+.+.+-....++.+++.+.++|++..+
T Consensus 173 GAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GI 208 (310)
T 3apt_A 173 GLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGI 208 (310)
T ss_dssp HCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEE
T ss_pred CCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEe
No 454
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=20.41 E-value=1.2e+02 Score=30.18 Aligned_cols=85 Identities=16% Similarity=0.167 Sum_probs=49.7
Q ss_pred hHHHHHHHhhhhhHHhhhcCCCeEEe-eccc----hhhhHHHHHHHHhhcC---cccccceeeecCCCceeecCchHH-H
Q 024544 162 SLETLKEFHRRRVLILANSGADLIAF-ETIP----NKLEAKAYAELLEEEG---ITIPAWFSFNSKDGINVVSGDSIL-E 232 (266)
Q Consensus 162 ~~~e~~~~~~~qi~~l~~~gvD~i~~-ET~~----~~~E~~a~~~a~~~~~---~~~Pv~iSf~~~~~~~l~~G~~~~-~ 232 (266)
=.+.+...|.+.++.|.++||+.|-| |..- +.+...++-.+++... .+.++++..++. ++. +
T Consensus 180 ll~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~G---------~~~~~ 250 (765)
T 1u1j_A 180 LLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFA---------DIPAE 250 (765)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTCSSEEEEECCSS---------CCCHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCCC---------CcchH
Confidence 35788999999999999999998743 4221 1122223334444431 135555554432 123 4
Q ss_pred hhhHHhhhhh-hhhcccccCC-cchh
Q 024544 233 CASIADSCEQ-VVAVGINCTS-PRFI 256 (266)
Q Consensus 233 a~~~~~~~~~-~~avGiNC~~-p~~~ 256 (266)
.+..+.+ .+ ++++++-+.. +..+
T Consensus 251 ~~~~l~~-l~~vd~l~lD~v~~~~~l 275 (765)
T 1u1j_A 251 AYKTLTS-LKGVTAFGFDLVRGTKTL 275 (765)
T ss_dssp HHHHHTT-CTTCCEEEEESSSCTTHH
T ss_pred HHHHHHc-CCCCcEEEEEecCCcccH
Confidence 5555655 45 8899998874 4333
No 455
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=20.40 E-value=1e+02 Score=27.20 Aligned_cols=44 Identities=11% Similarity=0.099 Sum_probs=27.0
Q ss_pred hhhHHhhhcC--CCeEEeeccchhhhHHHHHHHHhhcCccccccee
Q 024544 172 RRVLILANSG--ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFS 215 (266)
Q Consensus 172 ~qi~~l~~~g--vD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iS 215 (266)
..++.+++.| +|.|++=-+.+.+|++.+.++++..+.++++|+.
T Consensus 118 ~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~ 163 (316)
T 3qll_A 118 EDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGI 163 (316)
T ss_dssp HHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEE
T ss_pred HHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3455555555 4888888787888887777777643323444443
No 456
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=20.36 E-value=1.2e+02 Score=20.85 Aligned_cols=35 Identities=9% Similarity=0.241 Sum_probs=21.6
Q ss_pred hcCCCeEEeec-cchhhhHHHHHHHHhhcCcccccce
Q 024544 179 NSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 179 ~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
+..+|++++.. +|... ...+++.+++..+..|+++
T Consensus 42 ~~~~dlil~D~~l~~~~-g~~~~~~l~~~~~~~~ii~ 77 (121)
T 2pl1_A 42 EHIPDIAIVDLGLPDED-GLSLIRRWRSNDVSLPILV 77 (121)
T ss_dssp HSCCSEEEECSCCSSSC-HHHHHHHHHHTTCCSCEEE
T ss_pred ccCCCEEEEecCCCCCC-HHHHHHHHHhcCCCCCEEE
Confidence 45689999884 45443 3455666666544567654
No 457
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=20.34 E-value=73 Score=27.48 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=24.1
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcC
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEG 207 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~ 207 (266)
++.+.++|+|.+++=-+|. +|....++++++.+
T Consensus 112 ~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~g 144 (271)
T 1ujp_A 112 FGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIG 144 (271)
T ss_dssp HHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcC
Confidence 4556778999887766664 77778888887765
No 458
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=20.34 E-value=4.5e+02 Score=23.22 Aligned_cols=89 Identities=10% Similarity=0.060 Sum_probs=49.1
Q ss_pred chhHHH---HHHHhhhhhHHhhhcCCCeEEeecc----------c-----------hh-hh---HHHHHHHHhhc-Cccc
Q 024544 160 AVSLET---LKEFHRRRVLILANSGADLIAFETI----------P-----------NK-LE---AKAYAELLEEE-GITI 210 (266)
Q Consensus 160 ~~~~~e---~~~~~~~qi~~l~~~gvD~i~~ET~----------~-----------~~-~E---~~a~~~a~~~~-~~~~ 210 (266)
.+|.+| +.+.|.+-++...++|.|.|=+=-- | ++ +. +..+++++++. +.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 355554 5556766667777899998854321 1 11 12 33456666654 4467
Q ss_pred ccceeeecCCCceeecC-chHHHhhhHHhh--hhhhhhccccc
Q 024544 211 PAWFSFNSKDGINVVSG-DSILECASIADS--CEQVVAVGINC 250 (266)
Q Consensus 211 Pv~iSf~~~~~~~l~~G-~~~~~a~~~~~~--~~~~~avGiNC 250 (266)
|+.+-++..+- ...| .++++++..+.. ..+++.|-+-.
T Consensus 227 pV~vRis~~~~--~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 227 PLTARFGVLEY--DGRDEQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp CEEEEEEEECS--SSCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eEEEEecchhc--CCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 88888876331 1124 556666554432 14566655443
No 459
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=20.32 E-value=89 Score=27.73 Aligned_cols=38 Identities=16% Similarity=0.252 Sum_probs=29.6
Q ss_pred HHHhhhhhHHhhhc---CCCeEEeeccchhhh---HHHHHHHHh
Q 024544 167 KEFHRRRVLILANS---GADLIAFETIPNKLE---AKAYAELLE 204 (266)
Q Consensus 167 ~~~~~~qi~~l~~~---gvD~i~~ET~~~~~E---~~a~~~a~~ 204 (266)
.++|+.|++++..+ |.+-|++=-+.+.+| ++.+++.++
T Consensus 118 p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~ 161 (324)
T 2xz9_A 118 PDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVK 161 (324)
T ss_dssp HHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 46888899888764 999999999999999 555555443
No 460
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=20.31 E-value=2.3e+02 Score=23.11 Aligned_cols=61 Identities=15% Similarity=0.013 Sum_probs=35.8
Q ss_pred hhhHHhhhcCCCeEEeeccch-----hhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHH
Q 024544 172 RRVLILANSGADLIAFETIPN-----KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (266)
Q Consensus 172 ~qi~~l~~~gvD~i~~ET~~~-----~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~ 237 (266)
...+.+.+.||. |.+|+.+. +.++..+++.++..+ -| +.++++.......|.++.+.+..+
T Consensus 116 ~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~ll~~v~~~~--~~--vg~~~D~g~~~~~~~d~~~~~~~~ 181 (264)
T 1yx1_A 116 ALGRRLARHGLQ-LLVENDQTPQGGRIEVLERFFRLAERQQ--LD--LAMTFDIGNWRWQEQAADEAALRL 181 (264)
T ss_dssp HHHHHHTTSSCE-EEEECCSSHHHHCHHHHHHHHHHHHHTT--CS--EEEEEETTGGGGGTCCHHHHHHHH
T ss_pred HHHHHHHhcCCE-EEEecCCCCCCCCHHHHHHHHHHHHhcC--CC--eEEEEehhhhhhcCCCHHHHHHHh
Confidence 344555567884 56699875 466666666665533 35 455554433444566666666544
No 461
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=20.31 E-value=1.6e+02 Score=27.64 Aligned_cols=49 Identities=14% Similarity=0.116 Sum_probs=36.3
Q ss_pred hhHHHHHHHhhhhhH--HhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccce
Q 024544 161 VSLETLKEFHRRRVL--ILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~--~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
++..+..+ ++ ..++.|+|+|.+=-+.+.++++.+.+.+++.+.+.+++.
T Consensus 179 lTekD~~d-----l~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iia 229 (461)
T 3qtg_A 179 PAEEDVEA-----LKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAV 229 (461)
T ss_dssp SCHHHHHH-----HHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCHHHHHH-----HHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEE
Confidence 45555444 34 456789999999999999999999999988764445444
No 462
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=20.31 E-value=1.4e+02 Score=25.69 Aligned_cols=30 Identities=13% Similarity=-0.120 Sum_probs=23.3
Q ss_pred hhHHHHHHHhhhhhHHhhh-cCCCeEEeecc
Q 024544 161 VSLETLKEFHRRRVLILAN-SGADLIAFETI 190 (266)
Q Consensus 161 ~~~~e~~~~~~~qi~~l~~-~gvD~i~~ET~ 190 (266)
.+.+++.++-...++.+++ .|+|+|++=..
T Consensus 63 ~s~~~i~~~~~~i~~~ll~~~g~d~IviaCN 93 (285)
T 2jfn_A 63 KSEAFIVERVVAIVTAVQERYPLALAVVACN 93 (285)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCEEEEECc
Confidence 4678888888777887765 89999987643
No 463
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=20.29 E-value=97 Score=22.17 Aligned_cols=36 Identities=8% Similarity=0.121 Sum_probs=21.6
Q ss_pred hhcCCCeEEeecc-chhhhHHHHHHHHhh--cCcccccce
Q 024544 178 ANSGADLIAFETI-PNKLEAKAYAELLEE--EGITIPAWF 214 (266)
Q Consensus 178 ~~~gvD~i~~ET~-~~~~E~~a~~~a~~~--~~~~~Pv~i 214 (266)
.+..+|++++... |.. ....+++.+++ ..+..|+++
T Consensus 47 ~~~~~dlvi~d~~l~~~-~g~~~~~~l~~~~~~~~~~ii~ 85 (140)
T 3grc_A 47 ARRPYAAMTVDLNLPDQ-DGVSLIRALRRDSRTRDLAIVV 85 (140)
T ss_dssp HHSCCSEEEECSCCSSS-CHHHHHHHHHTSGGGTTCEEEE
T ss_pred HhCCCCEEEEeCCCCCC-CHHHHHHHHHhCcccCCCCEEE
Confidence 3456899999854 543 44555666665 223566654
No 464
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=20.28 E-value=1.5e+02 Score=25.22 Aligned_cols=42 Identities=12% Similarity=-0.021 Sum_probs=25.7
Q ss_pred hHHhhhcCCCeEEeec---cchhhhHHHHHHHHhhcCcccccceeee
Q 024544 174 VLILANSGADLIAFET---IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET---~~~~~E~~a~~~a~~~~~~~~Pv~iSf~ 217 (266)
++.+...|+|++++.. ..+..++...+.+++.. +.|+||-+.
T Consensus 32 ~e~a~~~GaD~v~lDlE~~~~~~~~~~~~~~a~~~~--~~~~~VRv~ 76 (267)
T 2vws_A 32 AEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPY--ASQPVIRPV 76 (267)
T ss_dssp HHHHHTTCCSEEEEETTTSCCCHHHHHHHHHHHTTS--SSEEEEECS
T ss_pred HHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCcEEEEeC
Confidence 4556678999999863 33444555555555433 467777663
No 465
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=20.17 E-value=2.1e+02 Score=23.82 Aligned_cols=46 Identities=15% Similarity=0.211 Sum_probs=30.6
Q ss_pred hhHHhhhcCCCeEEee-----ccchhhhHHHHHHHHhhcCcccccceeeecCC
Q 024544 173 RVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (266)
Q Consensus 173 qi~~l~~~gvD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~ 220 (266)
.++.+ ++|+|++-+- .+|++..-..+++.+|+.. ++|+-+-+.+.+
T Consensus 18 ~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~-~~~~dvhLmv~d 68 (231)
T 3ctl_A 18 QIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA-TKPLDCHLMVTR 68 (231)
T ss_dssp HHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC-CSCEEEEEESSC
T ss_pred HHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc-CCcEEEEEEecC
Confidence 45666 7888765333 3477777777888888753 577766666554
No 466
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=20.17 E-value=1.5e+02 Score=24.90 Aligned_cols=75 Identities=13% Similarity=0.190 Sum_probs=40.9
Q ss_pred hHHhhhcCCCeEEeeccchhhhHHHHHHHHhhcCcccccceeeecC--CCc-------eeecCchHHHhhhHHhhhhhhh
Q 024544 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSK--DGI-------NVVSGDSILECASIADSCEQVV 244 (266)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~--~~~-------~l~~G~~~~~a~~~~~~~~~~~ 244 (266)
++.+++.|+|-+.+-|..- ..-..+-++++.++ +..+++++.+. .+. +-.++.++.+.+..+.. .++.
T Consensus 90 ~~~~l~~GadkVii~t~a~-~~p~li~e~~~~~g-~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~-~g~~ 166 (243)
T 4gj1_A 90 VKALLDCGVKRVVIGSMAI-KDATLCLEILKEFG-SEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSN-KGLK 166 (243)
T ss_dssp HHHHHHTTCSEEEECTTTT-TCHHHHHHHHHHHC-TTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHT-TTCC
T ss_pred HHHHHHcCCCEEEEccccc-cCCchHHHHHhccc-CceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhh-cCCc
Confidence 4556679999999987653 23344555666665 34566666542 222 22334555666655554 3444
Q ss_pred hcccccC
Q 024544 245 AVGINCT 251 (266)
Q Consensus 245 avGiNC~ 251 (266)
-+-+++.
T Consensus 167 eil~t~I 173 (243)
T 4gj1_A 167 HILCTDI 173 (243)
T ss_dssp EEEEEET
T ss_pred EEEeeee
Confidence 4555543
No 467
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=20.14 E-value=85 Score=29.49 Aligned_cols=61 Identities=11% Similarity=0.070 Sum_probs=43.6
Q ss_pred ccchhhhHHHHHHHHhhcCcccccceeeecCCCceeecCchHHHhhhHHhhhhhhhh----cccccC
Q 024544 189 TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVA----VGINCT 251 (266)
Q Consensus 189 T~~~~~E~~a~~~a~~~~~~~~Pv~iSf~~~~~~~l~~G~~~~~a~~~~~~~~~~~a----vGiNC~ 251 (266)
...++.++.+++++++++. .|..++|-=.+.--...|.++.+|......+..+.+ |.+|..
T Consensus 209 SYNNi~DadaA~~lv~ef~--~Pa~aivKH~nPCGvA~g~~l~~Ay~~A~~~Dp~SaFGGiiA~Nr~ 273 (464)
T 1zcz_A 209 SFNNILDAENAWFMAKNLP--RMGAVVVKHQSPCGAAIGEDKVEIVKKAIEADDESSFGGILAVNFE 273 (464)
T ss_dssp CHHHHHHHHHHHHHHHTCS--SSEEEEEETTEEEEEEECSCHHHHHHHHHHHTTTTTTTEEEEESSC
T ss_pred CcchhhhhHHHHHHHHhcC--CCeEEEEecCCccceecCcchHHHHHHHHhcCCccccCCEEEEcCc
Confidence 6778899999999999975 688877743222225668899999887655544444 556775
No 468
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=20.13 E-value=48 Score=27.35 Aligned_cols=23 Identities=26% Similarity=0.228 Sum_probs=17.5
Q ss_pred cccCchhHHHHhhhhhhccccEEEechh
Q 024544 50 LVSSPHLVRKVHLDYLDAGANIIITASY 77 (266)
Q Consensus 50 ll~~Pe~V~~iH~~Yl~AGAdiI~TnTy 77 (266)
+++++|.|++ ++|||+.|+|-|-
T Consensus 157 lI~t~edv~~-----l~aGA~aIsTs~~ 179 (188)
T 1vkf_A 157 LVETEEEARE-----ILKHVSAISTSSR 179 (188)
T ss_dssp CCCSHHHHHH-----HTTTSSEEEECCH
T ss_pred CcCCHHHHHH-----HHCCCeEEEeCCH
Confidence 4566666643 8999999999874
No 469
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=20.11 E-value=1.1e+02 Score=20.82 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=21.2
Q ss_pred hcCCCeEEeec-cchhhhHHHHHHHHhhcCcccccce
Q 024544 179 NSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWF 214 (266)
Q Consensus 179 ~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~Pv~i 214 (266)
+..+|++++.. +|.. ....+++.+++..+..|+++
T Consensus 43 ~~~~dlvl~D~~l~~~-~g~~~~~~l~~~~~~~~ii~ 78 (116)
T 3a10_A 43 SGNYDLVILDIEMPGI-SGLEVAGEIRKKKKDAKIIL 78 (116)
T ss_dssp HSCCSEEEECSCCSSS-CHHHHHHHHHHHCTTCCEEE
T ss_pred cCCCCEEEEECCCCCC-CHHHHHHHHHccCCCCeEEE
Confidence 35689999884 4543 33455666666444567654
No 470
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=20.02 E-value=3.3e+02 Score=24.37 Aligned_cols=85 Identities=8% Similarity=0.053 Sum_probs=46.8
Q ss_pred HHHHHHHhhhhhHHhhhcCCCeEEeecc----------ch------------hhh---HHHHHHHHhhc-Ccccccceee
Q 024544 163 LETLKEFHRRRVLILANSGADLIAFETI----------PN------------KLE---AKAYAELLEEE-GITIPAWFSF 216 (266)
Q Consensus 163 ~~e~~~~~~~qi~~l~~~gvD~i~~ET~----------~~------------~~E---~~a~~~a~~~~-~~~~Pv~iSf 216 (266)
.+++.+.|.+-++...++|.|.|=+=-- |. .+. +..+++++++. +.+ ||.+.+
T Consensus 161 I~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vrl 239 (377)
T 2r14_A 161 IPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIRL 239 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEEe
Confidence 3444556666666667899999865321 11 122 34556666653 434 888888
Q ss_pred ecCCC-ceeecCchHHHhhhHHhh--hhhhhhccc
Q 024544 217 NSKDG-INVVSGDSILECASIADS--CEQVVAVGI 248 (266)
Q Consensus 217 ~~~~~-~~l~~G~~~~~a~~~~~~--~~~~~avGi 248 (266)
+..+. ..+.+|.+.++++..++. ..+++.|-+
T Consensus 240 s~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v 274 (377)
T 2r14_A 240 TPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHF 274 (377)
T ss_dssp CTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEE
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 75421 112346677776555432 245665544
Done!