Query 024548
Match_columns 266
No_of_seqs 236 out of 1371
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 10:11:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024548.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024548hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dxd_A Cell division protein F 100.0 1.1E-66 3.6E-71 484.1 24.2 216 1-216 111-326 (396)
2 2vxy_A FTSZ, cell division pro 100.0 1.2E-63 4.2E-68 466.4 24.1 215 1-215 105-319 (382)
3 2vaw_A FTSZ, cell division pro 100.0 2.5E-60 8.4E-65 445.6 23.1 214 1-214 105-319 (394)
4 1rq2_A Cell division protein F 100.0 3.5E-60 1.2E-64 443.1 21.6 214 1-214 105-318 (382)
5 1ofu_A FTSZ, cell division pro 100.0 3.2E-59 1.1E-63 429.0 22.8 214 1-214 105-319 (320)
6 1w5f_A Cell division protein F 100.0 3.8E-58 1.3E-62 426.2 23.6 214 1-214 115-331 (353)
7 2vap_A FTSZ, cell division pro 100.0 2.3E-57 7.8E-62 422.0 24.0 214 1-215 131-344 (364)
8 2r75_1 Cell division protein F 100.0 3.1E-56 1.1E-60 411.7 23.1 215 1-215 101-316 (338)
9 4ei7_A Plasmid replication pro 100.0 1.2E-44 4.2E-49 339.8 16.0 215 1-215 121-364 (389)
10 3v3t_A Cell division GTPase FT 100.0 6.5E-40 2.2E-44 301.6 12.5 187 1-216 98-292 (360)
11 3m89_A FTSZ/tubulin-related pr 100.0 3E-36 1E-40 282.0 13.5 213 1-215 157-403 (427)
12 2btq_B Tubulin btubb; structur 100.0 7.3E-35 2.5E-39 276.6 10.6 207 1-208 140-369 (426)
13 3cb2_A Gamma-1-tubulin, tubuli 100.0 4.8E-33 1.6E-37 266.8 16.5 210 1-210 141-381 (475)
14 2bto_A Tubulin btuba; bacteria 100.0 2.6E-33 8.8E-38 268.8 14.2 210 1-210 143-376 (473)
15 3ryc_B Tubulin beta chain; alp 100.0 5.9E-32 2E-36 256.7 16.3 209 1-209 139-370 (445)
16 3ryc_A Tubulin alpha chain; al 100.0 2.8E-31 9.5E-36 252.5 14.1 209 1-209 141-380 (451)
17 3r4v_A Putative uncharacterize 99.6 1.1E-15 3.8E-20 136.3 8.3 104 1-115 90-196 (315)
18 3h4m_A Proteasome-activating n 34.4 1.3E+02 0.0046 24.8 7.8 60 3-63 58-119 (285)
19 2i9o_A MHB8A peptide; beta-hai 33.0 35 0.0012 19.8 2.5 18 3-20 17-34 (37)
20 1vim_A Hypothetical protein AF 31.8 51 0.0017 26.5 4.5 37 13-64 108-144 (200)
21 1nri_A Hypothetical protein HI 27.2 61 0.0021 28.2 4.4 43 5-62 148-193 (306)
22 2qz4_A Paraplegin; AAA+, SPG7, 26.7 2.5E+02 0.0085 22.6 8.4 61 3-64 46-108 (262)
23 3ake_A Cytidylate kinase; CMP 26.4 39 0.0013 26.6 2.8 22 1-22 7-28 (208)
24 2om2_B Regulator of G-protein 26.0 26 0.00088 21.1 1.1 10 247-256 27-36 (36)
25 1d2n_A N-ethylmaleimide-sensit 25.7 2.3E+02 0.0079 23.3 7.8 62 3-65 71-136 (272)
26 1c9k_A COBU, adenosylcobinamid 24.3 57 0.002 26.4 3.4 35 3-38 6-41 (180)
27 3fdi_A Uncharacterized protein 24.1 38 0.0013 27.5 2.3 25 1-25 11-35 (201)
28 3pp8_A Glyoxylate/hydroxypyruv 23.8 66 0.0023 28.3 4.0 54 6-60 146-200 (315)
29 1t0c_A Insulin; type I beta-tu 23.3 29 0.001 19.4 0.9 9 1-9 12-20 (31)
30 1m3s_A Hypothetical protein YC 23.2 96 0.0033 24.2 4.6 37 13-64 98-134 (186)
31 3vfd_A Spastin; ATPase, microt 21.6 2.1E+02 0.0071 25.3 7.0 61 2-63 154-216 (389)
32 3kbq_A Protein TA0487; structu 21.5 1.9E+02 0.0066 23.0 6.1 45 10-60 25-69 (172)
33 3eie_A Vacuolar protein sortin 21.4 1.9E+02 0.0065 24.8 6.5 62 2-64 57-120 (322)
34 3hdt_A Putative kinase; struct 21.2 43 0.0015 27.9 2.1 24 1-24 19-42 (223)
35 3trj_A Phosphoheptose isomeras 20.1 3.3E+02 0.011 21.6 7.7 45 6-65 123-173 (201)
No 1
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=100.00 E-value=1.1e-66 Score=484.08 Aligned_cols=216 Identities=57% Similarity=0.945 Sum_probs=211.3
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHHHHHH
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~~af~ 80 (266)
||||||||++|+|+++++|||++||+|||+||.|||++|+|||.+++++|++++|++|+||||+|+++|.+++++.++|+
T Consensus 111 mGGGTGSGaapvIaeiake~g~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~~af~ 190 (396)
T 4dxd_A 111 MGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFK 190 (396)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHHHHHH
T ss_pred cCCCccccHHHHHHHHHHhcCCceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccceecCceeeechHHHHHhhhccCceeEEEeeecCcchHHHHHHHHhhCCCccCCcccccceEEee
Q 024548 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNI 160 (266)
Q Consensus 81 ~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~g~a~~g~G~a~g~~r~~~A~~~Al~spLl~~~i~~Ak~ilv~i 160 (266)
.+|++|+|+|++||++|++||++|+||+||+++|+++|.++||+|+++|++|+.+|+++||++|||+.++++|+++|+||
T Consensus 191 ~aN~ll~q~VsgIT~~irfpG~iNvDfaDv~t~m~~~G~A~mG~G~a~G~~ra~~A~~~Ai~sPLL~~~i~gAkgvLvnI 270 (396)
T 4dxd_A 191 EADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNI 270 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCTBCCCHHHHHHHHTTCEECEEEEEEEESTTHHHHHHHHHHCCSSCSSCSTTCCEEEEEE
T ss_pred HHHHHHHHHHHhhhhhhccCCcccCCHHHHHHHhhcCCeEEEEEEeccCCchHHHHHHHHHhCccccCChhhhcceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHhhcCCCCcEEEEEEeCCCCCCeEEEEEEeecCCCCcc
Q 024548 161 TGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEE 216 (266)
Q Consensus 161 ~~g~di~l~ei~~~~~~i~~~~~~~a~Ii~G~~~d~~~~~~v~VtvIatg~~~~~~ 216 (266)
++++++++.|++++++.|++.++++++||||+++||+++++++||||||||+....
T Consensus 271 tgg~dl~l~Ev~~~~~~i~~~~~~~a~ii~G~~~d~~l~~~i~VtviaTG~~~~~~ 326 (396)
T 4dxd_A 271 TGGESLSLFEAQEAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGFDDKPT 326 (396)
T ss_dssp EECTTCCHHHHHHHHHHHHHHHSSCCEEEEEEEECTTSTTEEEEEEEEECCCCC--
T ss_pred EcCCCCCHHHHHHHHHHHHHHcCCCCeEEEeeeeCCCCCCcEEEEEEEecCCCCCC
Confidence 99999999999999999999999999999999999999999999999999987654
No 2
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=1.2e-63 Score=466.38 Aligned_cols=215 Identities=58% Similarity=0.971 Sum_probs=209.3
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHHHHHH
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~~af~ 80 (266)
||||||||++|+|+++++|||++||+|||+||.|||++|+|||.++|++|++++|++|+||||+|+++|.+++++.++|+
T Consensus 105 mGGGTGSG~apvla~~ake~g~ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~ 184 (382)
T 2vxy_A 105 MGGGTGTGAAPVIAQIAKDLGALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFR 184 (382)
T ss_dssp SSSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHhCCCeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccceecCceeeechHHHHHhhhccCceeEEEeeecCcchHHHHHHHHhhCCCccCCcccccceEEee
Q 024548 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNI 160 (266)
Q Consensus 81 ~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~g~a~~g~G~a~g~~r~~~A~~~Al~spLl~~~i~~Ak~ilv~i 160 (266)
.+|++|+++|++||++|++||++|+||+||+++|++.|+|+||+|++++++++.+|+++|+.+||+++++.+|+++++||
T Consensus 185 ~~N~ll~~~vsgIt~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~ea~~~a~~s~ll~~d~~~ak~~l~~i 264 (382)
T 2vxy_A 185 EADNVLRQGVQGISDLIATPGLINLDFADVKTIMSNKGSALMGIGIATGENRAAEAAKKAISSPLLEAAIDGAQGVLMNI 264 (382)
T ss_dssp HHHHHHHHHHHHHHTTTSSCCTTCCCHHHHHHHTTCSSEEEEEEEEEESTTHHHHHHHHHHTCTTSCSCGGGCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCccccCHHHHHHhccCCCceEEEEEecccccHHHHHHHHHHhCcCcCCChhhcceeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHhhcCCCCcEEEEEEeCCCCCCeEEEEEEeecCCCCc
Q 024548 161 TGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQE 215 (266)
Q Consensus 161 ~~g~di~l~ei~~~~~~i~~~~~~~a~Ii~G~~~d~~~~~~v~VtvIatg~~~~~ 215 (266)
+++++++++|+++++.+|+++.+++++|+||++++|+++++++||+|||||+...
T Consensus 265 ~gg~dl~~~ev~~a~~~I~~~~~~~a~ii~G~~~d~~~~~~v~VtvIatG~~~~~ 319 (382)
T 2vxy_A 265 TGGTNLSLYEVQEAADIVASASDQDVNMIFGSVINENLKDEIVVTVIATGFIEQE 319 (382)
T ss_dssp EECTTCCHHHHHHHHHHHHHHSCTTCEEEEEEEECTTCSSEEEEEEEEEEEC---
T ss_pred EeCCCCCHHHHHHHHHHHHHhcCCCCCEEEEeecCCCCCCeEEEEEEEcCCCCcc
Confidence 9999999999999999999999989999999999999999999999999997654
No 3
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=2.5e-60 Score=445.65 Aligned_cols=214 Identities=50% Similarity=0.824 Sum_probs=208.0
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHHHHHH
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~~af~ 80 (266)
||||||||++|+|++++||||++||+|||+||.|||++|+|||.++|++|++++|++|+||||+|+++|.+++++.++|+
T Consensus 105 mGGGTGSG~ap~lae~~ke~g~ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~ 184 (394)
T 2vaw_A 105 MGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLLAAFA 184 (394)
T ss_dssp TTSSHHHHHHHHHHHHHHHHTCEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHcCCcEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccceecCceeeechHHHHHhhhccCceeEEEeeecCcchHHHHHHHHhhCCCcc-CCcccccceEEe
Q 024548 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLD-IGIERATGIVWN 159 (266)
Q Consensus 81 ~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~g~a~~g~G~a~g~~r~~~A~~~Al~spLl~-~~i~~Ak~ilv~ 159 (266)
.+|++|+++|++||++|++||++|+||+||+++|++.|.++||+|++.+++|+.+|+++|+.+|||+ +++.+|+++++|
T Consensus 185 ~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~rv~ea~~~A~~spLl~~~d~~~ak~~lv~ 264 (394)
T 2vaw_A 185 KADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSEMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARGILVN 264 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTTTCCBEEEEEEECSTTHHHHHHHHHHTCGGGTTCCTTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccccHHHHHHhccCCCceeEEEEeccccchHHHHHHHHHhcCccCCCCccccceeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999997 799999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHhhcCCCCcEEEEEEeCCCCCCeEEEEEEeecCCCC
Q 024548 160 ITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQ 214 (266)
Q Consensus 160 i~~g~di~l~ei~~~~~~i~~~~~~~a~Ii~G~~~d~~~~~~v~VtvIatg~~~~ 214 (266)
|+++++++++|+++++.+|+++.+++++|+||++++|+++++++||+|||||+..
T Consensus 265 i~~~~dl~~~ev~~a~~~I~~~~~~~a~i~~G~~~d~~~~~~v~VtvIatG~~~~ 319 (394)
T 2vaw_A 265 ITAGPDLSLGEYSDVGNIIEQFASEHATVKVGTVIDADMRDELHVTVVATGLGAR 319 (394)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSCTTSEEEEEEEECSSCCSCEEEEEEEECC---
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcCCCCCEEEEeecCCCCCCeEEEEEEEccCCcc
Confidence 9999999999999999999999998999999999999999999999999999763
No 4
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=3.5e-60 Score=443.07 Aligned_cols=214 Identities=57% Similarity=0.935 Sum_probs=208.5
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHHHHHH
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~~af~ 80 (266)
||||||||++|+|+++++|||++||+|||+||.|||++|+|||.+++++|++++|++|+||||+|+++|.+++++.++|+
T Consensus 105 ~GGGTGSG~ap~laela~e~g~ltvsVv~~Pf~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~ 184 (382)
T 1rq2_A 105 EGGGTGTGGAPVVASIARKLGALTVGVVTRPFSFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLMDAFR 184 (382)
T ss_dssp TTSSHHHHHHHHHHHHHHHHTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHcCCcEEEEEecCcccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccceecCceeeechHHHHHhhhccCceeEEEeeecCcchHHHHHHHHhhCCCccCCcccccceEEee
Q 024548 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNI 160 (266)
Q Consensus 81 ~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~g~a~~g~G~a~g~~r~~~A~~~Al~spLl~~~i~~Ak~ilv~i 160 (266)
.+|++|+++|++||++|++||++|+||+||+++|++.|.++||+|.+.+++|+.+|+++|+.+||+++++.+|+++++||
T Consensus 185 ~~N~li~~~vs~it~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~ea~~~a~~s~ll~~d~~~ak~~l~~i 264 (382)
T 1rq2_A 185 SADEVLLNGVQGITDLITTPGLINVDFADVKGIMSGAGTALMGIGSARGEGRSLKAAEIAINSPLLEASMEGAQGVLMSI 264 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCGGGTTCGGGCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHccCCceeccHHHHHHhccCCCeeEEEeeecccccHHHHHHHHHHhCcCcCCChhchheEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHhhcCCCCcEEEEEEeCCCCCCeEEEEEEeecCCCC
Q 024548 161 TGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQ 214 (266)
Q Consensus 161 ~~g~di~l~ei~~~~~~i~~~~~~~a~Ii~G~~~d~~~~~~v~VtvIatg~~~~ 214 (266)
+++++++++|+++++.+|+++.+++++|+||++++|+++++++||||||||+..
T Consensus 265 ~gg~dl~~~ev~~a~~~I~~~~~~~a~ii~G~~~d~~~~~~v~VtvIatG~~~~ 318 (382)
T 1rq2_A 265 AGGSDLGLFEINEAASLVQDAAHPDANIIFGTVIDDSLGDEVRVTVIAAGFDVS 318 (382)
T ss_dssp EECTTCCHHHHHHHHHHHHHHSCTTCEEEEEEEECGGGTTEEEEEEEEECC---
T ss_pred EeCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCeEEEEEEEccCCcc
Confidence 999999999999999999999999999999999999999999999999999764
No 5
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=3.2e-59 Score=428.96 Aligned_cols=214 Identities=50% Similarity=0.824 Sum_probs=208.8
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHHHHHH
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~~af~ 80 (266)
||||||||++|+|+++++||+++||+|||+||.|||++|+|||.+++++|++++|++|+||||+|+++|.+++++.++|+
T Consensus 105 ~GGGTGSG~~~~la~~a~e~g~lt~~vv~~P~~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~~af~ 184 (320)
T 1ofu_A 105 MGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLLAAFA 184 (320)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHH
T ss_pred cCCCccccHHHHHHHHHHhcCCcEEEEEeCCccccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred HHHHHHHhhhhhcccceecCceeeechHHHHHhhhccCceeEEEeeecCcchHHHHHHHHhhCCCcc-CCcccccceEEe
Q 024548 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLD-IGIERATGIVWN 159 (266)
Q Consensus 81 ~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~g~a~~g~G~a~g~~r~~~A~~~Al~spLl~-~~i~~Ak~ilv~ 159 (266)
.+|++|+++|++||+++|+||++|+||+||+++|++.|.|+||+|++++++|+.+|+++|+.+||++ +++.+||++++|
T Consensus 185 ~~n~~l~~~v~~it~~ir~pG~iNvD~~dv~t~l~~~g~~~~g~g~a~g~~~~~~a~~~a~~~~ll~~~d~~~ak~~l~~ 264 (320)
T 1ofu_A 185 KADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSEMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARGILVN 264 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSSSCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCGGGTTCCGGGCSEEEEE
T ss_pred HHHHHHHHHhcccHhhcccCCceeecHHHHHHhccCCCeeEEEEEecCcccHHHHHHHHHHhccccccCCccccceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999997 899999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHhhcCCCCcEEEEEEeCCCCCCeEEEEEEeecCCCC
Q 024548 160 ITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQ 214 (266)
Q Consensus 160 i~~g~di~l~ei~~~~~~i~~~~~~~a~Ii~G~~~d~~~~~~v~VtvIatg~~~~ 214 (266)
|+++++++++|+++++++|+++.+++++|+||++++|+++++++||+|||||++.
T Consensus 265 i~~~~d~~~~ev~~a~~~i~~~~~~~~~ii~G~~~~~~~~~~v~vtviatg~~~~ 319 (320)
T 1ofu_A 265 ITAGPDLSLGEYSDVGNIIEQFASEHATVKVGTVIDADMRDELHVTVVATGLGAR 319 (320)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSCTTSEEEEEEEECTTCCSEEEEEEEEESCC--
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEcCCCCCCeEEEEEEEecCCcC
Confidence 9999999999999999999999999999999999999999999999999999753
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=3.8e-58 Score=426.18 Aligned_cols=214 Identities=44% Similarity=0.738 Sum_probs=210.1
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHHHHHH
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~~af~ 80 (266)
||||||||++|+|++++||||++|++|||+||.|||++|+|||.+++++|++++|++|+||||+|+++|.+++++.++|+
T Consensus 115 ~GGGTGSG~ap~la~~~ke~g~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~ 194 (353)
T 1w5f_A 115 FGGGTGTGASPVIAKIAKEMGILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIKDAFL 194 (353)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHhCCcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccceecCceeee--chHHHHHhhhccCceeEEEeeecCcchHHHHHHHHhhCCCccCCcccccceEE
Q 024548 81 LADDILRQGVRGISDIITIPGLVNV--DFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVW 158 (266)
Q Consensus 81 ~~n~vl~~~I~gIt~~i~~~G~iNv--DfaDv~tvL~~~g~a~~g~G~a~g~~r~~~A~~~Al~spLl~~~i~~Ak~ilv 158 (266)
.+|++|+++|++||+++|+||++|+ ||+||+++|++.|.|+||+|.+++++|+.+|+++|+++||+++++.+|+++++
T Consensus 195 ~~N~ll~~~v~~it~~ir~pG~iNv~~D~~dv~t~L~~~g~a~~g~g~a~g~~~v~ea~~~a~~~~ll~~d~~~ak~~l~ 274 (353)
T 1w5f_A 195 KADETLHQGVKGISELITKRGYIRLTSRFARIESVMKDAGAAILGIGVGKGEHRAREAAKKAMESKLIEHPVENASSIVF 274 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCTTCCSCGGGCSEEEE
T ss_pred HHHHHHHHHhcCchhhccCCcccccccCHHHHHHhccCCCeeEEEEeecCCcchHHHHHHHHHhCCCcCCChhhcceeEE
Confidence 9999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHhhcCCCCcEEEEEEeCCCCCC-eEEEEEEeecCCCC
Q 024548 159 NITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSG-QVSITLIATGFKRQ 214 (266)
Q Consensus 159 ~i~~g~di~l~ei~~~~~~i~~~~~~~a~Ii~G~~~d~~~~~-~v~VtvIatg~~~~ 214 (266)
||+++++++++|+++++++|+++.+++++|+||++++|++++ +++||+|||||+..
T Consensus 275 ~i~~~~dl~~~ev~~a~~~I~~~~~~~~~i~~G~~~d~~~~~~~v~vtviatg~~~~ 331 (353)
T 1w5f_A 275 NITAPSNIRMEEVHEAAMIIRQNSSEDADVKFGLIFDDEVPDDEIRVIFIATRFPDE 331 (353)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTSCTTSEEEEEEEECTTSCTTEEEEEEEEECCSCT
T ss_pred EEEeCCCCCHHHHHHHHHHHHHhhCCCCcEEEEEEeCCCCCCCeEEEEEEEeCCCCC
Confidence 999999999999999999999999989999999999999998 99999999999765
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=2.3e-57 Score=421.98 Aligned_cols=214 Identities=44% Similarity=0.772 Sum_probs=209.6
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHHHHHH
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~~af~ 80 (266)
||||||||++|+|++++|+|+++||+|||+||.|||++|+|||.+++++|++++|++|+||||+|+++|. ++++.++|+
T Consensus 131 ~GGGTGSG~ap~lae~lke~~~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i~~af~ 209 (364)
T 2vap_A 131 LGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPLKLAFK 209 (364)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCHHHHHH
T ss_pred CCCCCCCChHHHHHHHHHHhCCcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCChhhhhh
Confidence 7999999999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHhhhhhcccceecCceeeechHHHHHhhhccCceeEEEeeecCcchHHHHHHHHhhCCCccCCcccccceEEee
Q 024548 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNI 160 (266)
Q Consensus 81 ~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~g~a~~g~G~a~g~~r~~~A~~~Al~spLl~~~i~~Ak~ilv~i 160 (266)
.+|++|+|+|++|++++++||++|+||+||+++|++.|+|+||+|++++++|+.+|+++|+++||+++++.+|+++++||
T Consensus 210 ~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~ea~~~a~~~~ll~~d~~~ak~~l~~i 289 (364)
T 2vap_A 210 VADEVLINAVKGLVELITKDGLINVDFADVKAVMNNGGLAMIGIGESDSEKRAKEAVSMALNSPLLDVDIDGATGALIHV 289 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHHHTTCEEEEEEEEEECSTTHHHHHHHHHHTCTTCCSCGGGCCEEEEEE
T ss_pred hHHHHHHHHHhhhhHHhhcCCceeccHHHHHHhccCCCeeEEEEEecCCcchHHHHHHHHHhCcCcCcChhhcceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHhhcCCCCcEEEEEEeCCCCCCeEEEEEEeecCCCCc
Q 024548 161 TGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQE 215 (266)
Q Consensus 161 ~~g~di~l~ei~~~~~~i~~~~~~~a~Ii~G~~~d~~~~~~v~VtvIatg~~~~~ 215 (266)
+++++++++|+++++++|+++.+++++|+||++++|+++++++||+|||||+.++
T Consensus 290 ~~~~dl~~~ev~~a~~~I~~~~~~~a~ii~G~~~~~~~~~~v~VtvIatG~~~~~ 344 (364)
T 2vap_A 290 MGPEDLTLEEAREVVATVSSRLDPNATIIWGATIDENLENTVRVLLVITGVQSRI 344 (364)
T ss_dssp EECTTCCHHHHHHHHHHHHHHSCTTCEEEEEEEECTTCSSCEEEEEEEECCGGGE
T ss_pred EeCCCCCHHHHHHHHHHHHHhcCCCCCEEEEEEecCCCCCeEEEEEEEeCCCCCc
Confidence 9999999999999999999999988999999999999999999999999997654
No 8
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=3.1e-56 Score=411.74 Aligned_cols=215 Identities=40% Similarity=0.680 Sum_probs=210.2
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHHHHHH
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~~af~ 80 (266)
||||||||++|+++++++|||++||+|||+||.|||++|+|||.+++++|++++|++|+||||+|+++|.+++++.++|+
T Consensus 101 ~GGGTGSG~~~~ia~l~~e~g~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~~af~ 180 (338)
T 2r75_1 101 LGGGTGTGAAPVIAKTAKEMGILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIKDAFK 180 (338)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHHHHHH
T ss_pred cCCCcCCCchHHHHHHHHhcCCCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccceecCceeeechHHHHHhhhccCceeEEEeeecCcchHHHHHHHHhhCCCccC-CcccccceEEe
Q 024548 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDI-GIERATGIVWN 159 (266)
Q Consensus 81 ~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~g~a~~g~G~a~g~~r~~~A~~~Al~spLl~~-~i~~Ak~ilv~ 159 (266)
.+|++|+|+|++||+++++||++|+||+||+++|+++|.|+||+|++++++|+.+|+++||.+|||+. ++.+|++++++
T Consensus 181 ~~N~~i~~~v~~it~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~~a~~~ai~s~lle~n~~~~a~~~l~~ 260 (338)
T 2r75_1 181 EVDSVLSKAVRGITSIVVTPAVINVDFADVRTTLEEGGLSIIGMGEGRGDEKADIAVEKAVTSPLLEGNTIEGARRLLVT 260 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHHCBSSBSSCGGGCSEEEEE
T ss_pred HHHHHHHHHHhhhhhhhccCCceeCCHHHhhhheeCCccceeeeccCCccchHHHHHHHHHHhhhhcccchhhhheEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 79999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHhhcCCCCcEEEEEEeCCCCCCeEEEEEEeecCCCCc
Q 024548 160 ITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQE 215 (266)
Q Consensus 160 i~~g~di~l~ei~~~~~~i~~~~~~~a~Ii~G~~~d~~~~~~v~VtvIatg~~~~~ 215 (266)
|+|+++++++|+++++++|+++.+++++|+||++.+|+++++++||+|||||+...
T Consensus 261 i~G~~dl~~~ev~~a~~~I~~~~~~~~~i~~G~~~~~~~~~~~~vtviatg~~~~~ 316 (338)
T 2r75_1 261 IWTSEDIPYDIVDEVMERIHSKVHPEAEIIFGAVLEPQEQDFIRVAIVATDFPEEK 316 (338)
T ss_dssp EEECTTSCTTHHHHHHHHHHHHSCTTCEEEEEEEECTTCCSEEEEEEEEECCSSCC
T ss_pred EEcCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEeCCCCCCeEEEEEEECCCCCCC
Confidence 99999999999999999999999889999999999999999999999999998664
No 9
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=100.00 E-value=1.2e-44 Score=339.78 Aligned_cols=215 Identities=14% Similarity=0.124 Sum_probs=194.6
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHH---hcCCEEEEEeChhhhhhhc---CCCC
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLR---DNVDTLIVIPNDKLLTAVS---QSTP 74 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~---~~~D~~ividNd~L~~~~~---~~~~ 74 (266)
||||||||++|+++++|||++++|++|||+||.|||++|..||..+|++|+ +++|++||||||+|++++. +..+
T Consensus 121 ~GGGTGtGa~pvia~~~ke~~~~~~~vvt~Pf~~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~ 200 (389)
T 4ei7_A 121 LGGGTGTGALLKAIEMLYEHDYNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSAL 200 (389)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCC
T ss_pred CCCCCccccHHHHHHHHHHcCCCEEEEEEeCCCcCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCC
Confidence 899999999999999999999999999999999999999999999999996 6699999999999999874 4678
Q ss_pred HHHHHHHHHHHHHhhhhhcccceecC---ceeeechHHHHHhhhccCceeEEEeeec-------CcchHHHHHHHHhhCC
Q 024548 75 VTEAFNLADDILRQGVRGISDIITIP---GLVNVDFADVRAIMANAGSSLMGIGTAT-------GKTRARDAALNAIQSP 144 (266)
Q Consensus 75 l~~af~~~n~vl~~~I~gIt~~i~~~---G~iNvDfaDv~tvL~~~g~a~~g~G~a~-------g~~r~~~A~~~Al~sp 144 (266)
+.++|+.+|++|++.+++|.+++..+ |++|+||+||+++|++.|.++||+|.++ +++++.+|+++|+.+|
T Consensus 201 ~~~af~~an~~l~~~v~~i~~~~~~~~~~g~in~D~aDv~~vm~~~G~a~~G~~~~~~~~~~~~~~~~~~~a~~~ai~~~ 280 (389)
T 4ei7_A 201 ANEYTSYSNKYIADALHEINLVTSSFTPFSDTHFDASEFAQVINTPGVLSLAKLELKSNQLDTENPLGYLTQLGNALEKG 280 (389)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHTTSSEESSSCCCCHHHHHHHHTSSEEEEEEEEEEEGGGCCTTSTHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeeHHHHHHHhcCCCEEEEEeeeccccccccccchHHHHHHHHHHhcc
Confidence 89999999999999999999888765 9999999999999999999999999754 4558999999999999
Q ss_pred Ccc----CCcccccceEEeecCCCC-----CCHHHHHHHHHHHHhhcC----CCCcEEEEEEeCCCCCCeEEEEEEeecC
Q 024548 145 LLD----IGIERATGIVWNITGGSD-----LTLFEVNAAAEVIYDLVD----PTANLIFGAVIDPSLSGQVSITLIATGF 211 (266)
Q Consensus 145 Ll~----~~i~~Ak~ilv~i~~g~d-----i~l~ei~~~~~~i~~~~~----~~a~Ii~G~~~d~~~~~~v~VtvIatg~ 211 (266)
||+ +++++|+++|+||+++++ +.+.+++++.+++++... ..+.++||.+.+++++++++||+||||+
T Consensus 281 ll~~~~~~~i~~A~~~ll~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~~g~~~~~~~~~~V~v~viatG~ 360 (389)
T 4ei7_A 281 VLYDTEREELESAKKSALSIVTSPLRAGRLYNFSFLNQMENFLKERTPYVDERPIAPYVNKHTTKKEEDIVKFYSVVAGL 360 (389)
T ss_dssp SSSBCCHHHHTTCSEEEEEEEECHHHHHHHSSHHHHHHHHHHHHHHSTTCSCCCEEEEECTTCCGGGTTEEEEEEEEEEE
T ss_pred ccccccccChhhhheEEEEEEcCcccchhhhhHHHHHHHHHHHHhhccccCcccceEEecCCCCcCCCCeEEEEEEEecC
Confidence 995 368999999999998875 677788888888888763 3467889999999999999999999999
Q ss_pred CCCc
Q 024548 212 KRQE 215 (266)
Q Consensus 212 ~~~~ 215 (266)
..+.
T Consensus 361 ~~~~ 364 (389)
T 4ei7_A 361 PLPK 364 (389)
T ss_dssp CCCH
T ss_pred CchH
Confidence 7653
No 10
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=100.00 E-value=6.5e-40 Score=301.57 Aligned_cols=187 Identities=17% Similarity=0.191 Sum_probs=160.6
Q ss_pred CCCCCCCchHHHHHHHHHHcCCc-EEEEEe-cCCcchhhHhHHHHHHHHHHHHh---cCC--EEEEEeChhhhhhhcCCC
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGIL-TVGIVT-TPFSFEGRRRAVQAQEGIASLRD---NVD--TLIVIPNDKLLTAVSQST 73 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~l-tv~Vvt-~Pf~~Eg~~r~~nA~~gl~~L~~---~~D--~~ividNd~L~~~~~~~~ 73 (266)
||||||||++|+|++.+++.+.+ ++.+|+ .||.+||++|+|||.+++++|++ ++| |+|+||||+
T Consensus 98 lGGGTGSG~~pvLae~lke~~~~k~v~~vtV~Pf~~Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea--------- 168 (360)
T 3v3t_A 98 MAGGAGSGITPPILGLAKQMYPNKHFGFVGVLPKATEDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK--------- 168 (360)
T ss_dssp TTSHHHHHHHHHHHHHHHHHCTTSEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG---------
T ss_pred cCCCccccHHHHHHHHHHHhCCCCeEEEEEEeCCCccchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC---------
Confidence 89999999999999999986643 666665 99999999999999999999999 555 559999998
Q ss_pred CHHHHHHHHHHHHHhhhhhcccceecCceeeechHHHHHhhhccCceeEEEeeecCcchHHHHHHHHhhCCCcc-CCccc
Q 024548 74 PVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLD-IGIER 152 (266)
Q Consensus 74 ~l~~af~~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~g~a~~g~G~a~g~~r~~~A~~~Al~spLl~-~~i~~ 152 (266)
.++|..+|++|+|++++++.++++||.+|+||+||+++|...|.++||. +.|++|+.+|+++||+||||+ .++.+
T Consensus 169 --~~ay~~lN~lIaq~vs~lt~~l~~~G~iNVDfaDv~tvm~~~G~a~mg~--~~g~~ra~~A~~~Ai~spLl~~~~i~g 244 (360)
T 3v3t_A 169 --REKESDINKEFATLFNDFMNMSESHAEGVVDEDEISKLLTMKKSNVILE--FDDKEDIQVALAKSLKESIFAEYTTNT 244 (360)
T ss_dssp --SSSHHHHHHHHHHHHHHHHGGGSCCSSCCCCHHHHHHHHHCCEEEEEEE--CCSSSCHHHHHHHHHHTCSBCCCCCCB
T ss_pred --chhHHHHHHHHHHHHHHHHHhhccCCceeeeHHHHHHHHhCCCcEEEEE--ecCccHHHHHHHHHHhCcCCCCCCccC
Confidence 3479999999999999999999999999999999999999999999994 689999999999999999996 68999
Q ss_pred ccceEEeecCCCCCCHHHHHHHHHHHHhhcCCCCcEEEEEEeCCCCCCeEEEEEEeecCCCCcc
Q 024548 153 ATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEE 216 (266)
Q Consensus 153 Ak~ilv~i~~g~di~l~ei~~~~~~i~~~~~~~a~Ii~G~~~d~~~~~~v~VtvIatg~~~~~~ 216 (266)
|+++|+|++++ + +++|+.+.|+ .+.. +||.+ .++.+ ||||||+..+.+
T Consensus 245 a~~~linit~~--~---d~~ei~~~i~----~~~~-~fg~y-----~~~~~-~vv~tG~~~~~~ 292 (360)
T 3v3t_A 245 CEFMGISTTRV--V---DVEAIKSIVG----YPRR-TFKGY-----NSKKN-IVVATGIEPQKT 292 (360)
T ss_dssp CSEEEEEESSC--C---CHHHHHHHHC----BCSE-EEEEE-----CSSCC-EEEEEEECCCHH
T ss_pred CcEEEEEecCC--C---CHHHHHHHhC----Cchh-eeeee-----CCccc-EEEEcCCCccch
Confidence 99999999875 3 4555555553 3344 55774 24456 999999987754
No 11
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=100.00 E-value=3e-36 Score=281.95 Aligned_cols=213 Identities=15% Similarity=0.160 Sum_probs=177.9
Q ss_pred CCCCCCCchHHHHHHHHHH--cCCcEEEEEecCCcchhhHhHHHHHHHHHHHHh---------------cCCEEEEEeCh
Q 024548 1 MGGGTGTGGAPVIAGVAKS--MGILTVGIVTTPFSFEGRRRAVQAQEGIASLRD---------------NVDTLIVIPND 63 (266)
Q Consensus 1 lGGGTGSGaapvia~iake--~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~---------------~~D~~ividNd 63 (266)
||||||||++|+|+++++| +++++++++++||.+|++ +|||.++|++|++ ++|++|++|||
T Consensus 157 lGGGTGSG~gp~la~~lke~~~~~~~~~vvt~P~~~e~~--~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe 234 (427)
T 3m89_A 157 AGGGVGTGWGSLVLQLIREQFFPCPVSMLISLPSGDPDE--INNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNT 234 (427)
T ss_dssp TTSHHHHHHHHHHHHHHHTTCSSSCEEEEEEECCSCHHH--HHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHH
T ss_pred cCCCccccHHHHHHHHHHHhcCCCcEEEEEEECCCCccH--HHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehH
Confidence 8999999999999999998 469999999999999975 4999999999754 99999999999
Q ss_pred hhhhhhcCCCC---HHH---HHH-HHHHHHHhhhhhccccee--cCceeeechHHHHHhhh-ccCceeEEEeeecCc--c
Q 024548 64 KLLTAVSQSTP---VTE---AFN-LADDILRQGVRGISDIIT--IPGLVNVDFADVRAIMA-NAGSSLMGIGTATGK--T 131 (266)
Q Consensus 64 ~L~~~~~~~~~---l~~---af~-~~n~vl~~~I~gIt~~i~--~~G~iNvDfaDv~tvL~-~~g~a~~g~G~a~g~--~ 131 (266)
+|.+++..... +.+ +|+ .+|++|+++|++|+++++ +||++|+||+||+++|+ ..|.++||.+.+++. +
T Consensus 235 ~l~~i~~~~~~~~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G~a~iG~a~~~~~d~~ 314 (427)
T 3m89_A 235 QMQRIIESQKGTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGRFLTIGKARIAKFDLH 314 (427)
T ss_dssp HHHHHHHHSSCSSSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCSEEEEEEEEECSCSHH
T ss_pred HHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCCeEEEEEecccccchh
Confidence 99877643221 233 999 899999999999999886 59999999999999999 568999999988776 4
Q ss_pred hHHHHHHHHhhCCCc--cCCcccccceEEeecCCCCCCHHHHHHHHHHHHhhcCC--CCcEEEEEEeCCCC-CCeEEEEE
Q 024548 132 RARDAALNAIQSPLL--DIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDP--TANLIFGAVIDPSL-SGQVSITL 206 (266)
Q Consensus 132 r~~~A~~~Al~spLl--~~~i~~Ak~ilv~i~~g~di~l~ei~~~~~~i~~~~~~--~a~Ii~G~~~d~~~-~~~v~Vtv 206 (266)
++.+++++|+.+++| ++++.+|++++++|+++++..+.+..++.+.+++.+.+ +..-++|...+|-+ .+++.+.+
T Consensus 315 ~~~~ai~~al~~~~Ll~~~d~~~Ak~~lv~i~g~~~~~~~~~~~~~~~~~~~l~e~t~~~~v~g~~~~~~~~~~~~~~~~ 394 (427)
T 3m89_A 315 SLENSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKDVNTENRIRNTLGEYKRLDEIAGKFGDPIWDNEYAVCYT 394 (427)
T ss_dssp HHHHHHHHHHHSSTTCSCCCGGGCCEEEEEEEEESSCGGGGCHHHHHHHHHHHTTTSCGGGSEEEEECCEESSSSEEEEE
T ss_pred hHHHHHHHHHhCCCcccccCcccccEEEEEEEeCchhhhhhhHHHHHHHHHHHHhcCCceeccCCCCCcccCCcceEEEE
Confidence 789999999975543 67999999999999999998887776666666665543 23344998887722 35899999
Q ss_pred EeecCCCCc
Q 024548 207 IATGFKRQE 215 (266)
Q Consensus 207 Iatg~~~~~ 215 (266)
|..|..-+.
T Consensus 395 ~~~g~~~~~ 403 (427)
T 3m89_A 395 IFAGMTMPK 403 (427)
T ss_dssp EEEEECCCT
T ss_pred EecCCCccH
Confidence 999998664
No 12
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=7.3e-35 Score=276.58 Aligned_cols=207 Identities=16% Similarity=0.235 Sum_probs=168.9
Q ss_pred CCCCCCCchHHHHHHHHHH-c---CCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHH
Q 024548 1 MGGGTGTGGAPVIAGVAKS-M---GILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVT 76 (266)
Q Consensus 1 lGGGTGSGaapvia~iake-~---g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~ 76 (266)
||||||||++|++++.+++ | +++|++|+|.||.+|+++|+|||.+++++|.+++|++|+||||+|+++|.++++..
T Consensus 140 ~gGGTGSG~~~~l~e~l~~~y~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~~~ 219 (426)
T 2btq_B 140 IGGGSGSGLGSLILERLRQAYPKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLNRS 219 (426)
T ss_dssp SSSSTTTHHHHHHHHHHHTTCTTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSSSC
T ss_pred cCCCccccHHHHHHHHHHHHcCcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCCCC
Confidence 7999999999999999887 4 58999999999999999999999999999999999999999999999998777756
Q ss_pred HHHHHHHHHHHhhhhhcccceecCceeeechHHHHHhhhcc-CceeEEEeeecCcchH---------HHHHHHHh--hCC
Q 024548 77 EAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANA-GSSLMGIGTATGKTRA---------RDAALNAI--QSP 144 (266)
Q Consensus 77 ~af~~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~-g~a~~g~G~a~g~~r~---------~~A~~~Al--~sp 144 (266)
++|+.+|++|+++|++||+++|+||.+|+||+|++++|.|+ ++||+.+|++|-..+. .+.+++.. .+.
T Consensus 220 ~~f~~~N~lia~~v~~it~~lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~ 299 (426)
T 2btq_B 220 PNYMDLNNIIALIVSSVTASLRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNF 299 (426)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGB
T ss_pred cHHHHHHHHHHhhhcchhhhccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccce
Confidence 79999999999999999999999999999999999999997 6999999999853221 11122222 233
Q ss_pred CccCCcccccceEEeec-CCCCCCHHHHHHHHHHHHhhcC----CC--CcEEEEEEeCCCCCCeEEEEEEe
Q 024548 145 LLDIGIERATGIVWNIT-GGSDLTLFEVNAAAEVIYDLVD----PT--ANLIFGAVIDPSLSGQVSITLIA 208 (266)
Q Consensus 145 Ll~~~i~~Ak~ilv~i~-~g~di~l~ei~~~~~~i~~~~~----~~--a~Ii~G~~~d~~~~~~v~VtvIa 208 (266)
++.+++..++++.+.+. +| +++++|+++++..|++... .+ ..+++|++..|+.+.+..+++|+
T Consensus 300 m~~~dp~~g~yla~~~i~rG-~v~~~~v~~~~~~ik~~~~fv~W~p~~~~~k~~i~~~~p~~~~~s~~~ls 369 (426)
T 2btq_B 300 TAAIDWQQGVYLAASALFRG-DVKAKDVDENMATIRKSLNYASYMPASGGLKLGYAETAPEGFASSGLALV 369 (426)
T ss_dssp SSCCCTTTCCEEEEEEEEEC-C----CTTTTHHHHHTTSCBCTTSCSSCSEEEEEESCCCTTCSSBCCEEE
T ss_pred eEecCCCCchHHHHHHHHcC-CCCHHHHHHHHHHHhcCCCCcccCCCCCceeeeeeccCCCCCcceeEEec
Confidence 55678888888765444 55 9999999999999954422 35 78999999888776667777764
No 13
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=4.8e-33 Score=266.76 Aligned_cols=210 Identities=15% Similarity=0.161 Sum_probs=173.0
Q ss_pred CCCCCCCchHHHHHHHHHH-cC---CcEEEEEecCC-cchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCH
Q 024548 1 MGGGTGTGGAPVIAGVAKS-MG---ILTVGIVTTPF-SFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPV 75 (266)
Q Consensus 1 lGGGTGSGaapvia~iake-~g---~ltv~Vvt~Pf-~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l 75 (266)
||||||||++|++++.+++ |+ +++++|+|.|| .+|+++|+|||.+++++|.+++|++|+|||++|+++|.+++++
T Consensus 141 lGGGTGSG~~s~l~e~l~dey~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i 220 (475)
T 3cb2_A 141 IAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHI 220 (475)
T ss_dssp SSSSHHHHHHHHHHHHHHHHSTTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCC
T ss_pred CCCCCCcChHHHHHHHHHHHcCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCC
Confidence 7999999999999998876 64 88999999888 6899999999999999999999999999999999999989998
Q ss_pred HH-HHHHHHHHHHhhhhhcccceecCceeeechHHHHHhhhcc-CceeEEEeeecCcchH----------HHHHHHHhh-
Q 024548 76 TE-AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANA-GSSLMGIGTATGKTRA----------RDAALNAIQ- 142 (266)
Q Consensus 76 ~~-af~~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~-g~a~~g~G~a~g~~r~----------~~A~~~Al~- 142 (266)
.. +|+.+|++|+++|++||+++|+||.+|+||+|++++|.|+ .+||+.++++|-..+. .+.+++...
T Consensus 221 ~~p~f~~~N~lia~~vs~iT~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~ 300 (475)
T 3cb2_A 221 QNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP 300 (475)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSG
T ss_pred CcchHHHHHHHHhhhccccccccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhcc
Confidence 85 9999999999999999999999999999999999999998 5999999999854321 122222221
Q ss_pred -CCCccCCcc---cccceEEeecCCCCCCHHHHHHHHHHHHhhcC------CCCcEEEEEEeCCCC---CCeEEEEEEee
Q 024548 143 -SPLLDIGIE---RATGIVWNITGGSDLTLFEVNAAAEVIYDLVD------PTANLIFGAVIDPSL---SGQVSITLIAT 209 (266)
Q Consensus 143 -spLl~~~i~---~Ak~ilv~i~~g~di~l~ei~~~~~~i~~~~~------~~a~Ii~G~~~d~~~---~~~v~VtvIat 209 (266)
+.+..+++. ..+++.+....+.++..+|+++++..|+++.. .+..+++|++..|+. +.++.+++|+.
T Consensus 301 ~n~m~~~dp~~~~~gkyla~~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~~~~s~~~lsN 380 (475)
T 3cb2_A 301 KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMAN 380 (475)
T ss_dssp GGBSSCCCCC--CCCCEEEEEEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC-----CCEEEEEEE
T ss_pred ccceEecCcccccccchhhhHHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCCcceEEEEecC
Confidence 123346666 67877765543339999999999999998722 368899999988775 56788888875
Q ss_pred c
Q 024548 210 G 210 (266)
Q Consensus 210 g 210 (266)
-
T Consensus 381 ~ 381 (475)
T 3cb2_A 381 H 381 (475)
T ss_dssp E
T ss_pred C
Confidence 3
No 14
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=2.6e-33 Score=268.75 Aligned_cols=210 Identities=14% Similarity=0.206 Sum_probs=168.8
Q ss_pred CCCCCCCchHHHHHHHHHH-c---CCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHH
Q 024548 1 MGGGTGTGGAPVIAGVAKS-M---GILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVT 76 (266)
Q Consensus 1 lGGGTGSGaapvia~iake-~---g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~ 76 (266)
||||||||++|+|++.+++ | .+++++|+|.||.+|+.+|+|||.+++++|.+++|++|+||||+|+++|.+++++.
T Consensus 143 lgGGTGSG~~~~l~e~l~e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~ 222 (473)
T 2bto_A 143 IGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIE 222 (473)
T ss_dssp SSSSHHHHHHHHHHHHHHHHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCS
T ss_pred CCCCCCcchHHHHHHHHHHHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccC
Confidence 7999999999999998887 4 38999999999999999999999999999999999999999999999998888986
Q ss_pred -HHHHHHHHHHHhhhhhcccceecCceeeec--hHHHHHhhhcc-CceeEEEeeecCcc---------hHHHHHHHHh--
Q 024548 77 -EAFNLADDILRQGVRGISDIITIPGLVNVD--FADVRAIMANA-GSSLMGIGTATGKT---------RARDAALNAI-- 141 (266)
Q Consensus 77 -~af~~~n~vl~~~I~gIt~~i~~~G~iNvD--faDv~tvL~~~-g~a~~g~G~a~g~~---------r~~~A~~~Al-- 141 (266)
++|+.+|++|+++|++||+++|+||.+|+| |+||+++|.|+ ++||+..|++|-.. ...+.+++..
T Consensus 223 ~~~f~~~N~lia~~v~~it~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~ 302 (473)
T 2bto_A 223 SPTVDDLNLLITEALAGITASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDN 302 (473)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSG
T ss_pred cchHHHHHHHHhhhcccchhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhccc
Confidence 799999999999999999999999999999 99999999998 58999999998322 2333333333
Q ss_pred hCCCccCCcccccceEEeecCCCCCCHHHH-HHHHHHHHhhcC----CCCcEEEEEEeCCCCCCeEEEEEEeec
Q 024548 142 QSPLLDIGIERATGIVWNITGGSDLTLFEV-NAAAEVIYDLVD----PTANLIFGAVIDPSLSGQVSITLIATG 210 (266)
Q Consensus 142 ~spLl~~~i~~Ak~ilv~i~~g~di~l~ei-~~~~~~i~~~~~----~~a~Ii~G~~~d~~~~~~v~VtvIatg 210 (266)
.+.+..+++..++++.+.+..+.+++++|+ ++++..|+++.. .+..+++|++..|+.+.+..+++|+.-
T Consensus 303 ~n~m~~~dp~~gkyla~~~i~RG~v~~~dv~~~~i~~ik~k~~~~FW~p~~~kv~i~~~pp~g~~~s~~~lsNs 376 (473)
T 2bto_A 303 GSVFAACSPMEGRFLSTAVLYRGIMEDKPLADAALAAMREKLPLTYWIPTAFKIGYVEQPGISHRKSMVLLANN 376 (473)
T ss_dssp GGBSSSSCGGGSCEEEEEEEEEEC----CCHHHHHHHHHTTSCBCSSSCCCEEEEEESSCCSSCSEEEEEEEEE
T ss_pred ccceeecCCCCchHHHHHHhhcCCCChHHhhHHHHHHHHhhcccceecCCcceecccccCCcCcceeEEEecCC
Confidence 223456788888887665443337999999 999999997732 257889999998888888899998865
No 15
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=99.98 E-value=5.9e-32 Score=256.73 Aligned_cols=209 Identities=15% Similarity=0.199 Sum_probs=178.3
Q ss_pred CCCCCCCchHHHHHH-HHHHcC---CcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHH
Q 024548 1 MGGGTGTGGAPVIAG-VAKSMG---ILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVT 76 (266)
Q Consensus 1 lGGGTGSGaapvia~-iake~g---~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~ 76 (266)
||||||||++|++.+ ++.+|+ +++++|+|.|+.+|+.+++|||.+++++|.+++|+++++|||+|+++|..++.+.
T Consensus 139 lgGGTGSG~gs~lle~L~~ey~kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~ 218 (445)
T 3ryc_B 139 LGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLT 218 (445)
T ss_dssp SSSSHHHHHHHHHHHHHHHHCTTSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCS
T ss_pred cCCCCCCcHHHHHHHHHHHHcCccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCC
Confidence 799999999987655 788887 6899999999999999999999999999999999999999999999998888886
Q ss_pred -HHHHHHHHHHHhhhhhcccceecCceeeechHHHHHhhhcc-CceeEEEeeecCcc---------hHHHHHHHHhh--C
Q 024548 77 -EAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANA-GSSLMGIGTATGKT---------RARDAALNAIQ--S 143 (266)
Q Consensus 77 -~af~~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~-g~a~~g~G~a~g~~---------r~~~A~~~Al~--s 143 (266)
++|..+|++|++.|+++|.++|+||.+|+|+.|+.++|.|+ .+||+..+++|-.. ...+.+++.+. +
T Consensus 219 ~p~y~~lN~lIa~~~s~iT~slRf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n 298 (445)
T 3ryc_B 219 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298 (445)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGG
T ss_pred CCcchhhHHHHHhcchhhccccccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcC
Confidence 69999999999999999999999999999999999999998 69999999998422 12233333221 2
Q ss_pred CCccCCcccccceEEeecCCCCCCHHHHHHHHHHHHhhcC------CCCcEEEEEEeCCCCCCeEEEEEEee
Q 024548 144 PLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVD------PTANLIFGAVIDPSLSGQVSITLIAT 209 (266)
Q Consensus 144 pLl~~~i~~Ak~ilv~i~~g~di~l~ei~~~~~~i~~~~~------~~a~Ii~G~~~d~~~~~~v~VtvIat 209 (266)
.+..+++..+|++.+....+.+++++|+++++..|+.+.. .+.++++|++..|+.+-+..+++|+.
T Consensus 299 ~m~~~dp~~gky~a~~~~~RG~v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~~~s~~~lsN 370 (445)
T 3ryc_B 299 MMAACDPRHGRYLTVATIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGN 370 (445)
T ss_dssp BSSSCCGGGSCEEEEEEEEEESCCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTCSEEEEEEEE
T ss_pred CeeecCCCCCcceeeeeeeecCCChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCcccceeeeeecC
Confidence 2345678888888776654448999999999999988632 46899999999998888899999874
No 16
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=99.97 E-value=2.8e-31 Score=252.48 Aligned_cols=209 Identities=14% Similarity=0.189 Sum_probs=176.2
Q ss_pred CCCCCCCchHHHHHH-HHHHcC---CcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHH
Q 024548 1 MGGGTGTGGAPVIAG-VAKSMG---ILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVT 76 (266)
Q Consensus 1 lGGGTGSGaapvia~-iake~g---~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~ 76 (266)
||||||||+++++.+ ++.+|+ +++++|+|.|..+++.+++|||.+++++|.+++|+++++|||+|+++|..++.+.
T Consensus 141 lgGGTGSG~gs~lle~L~~ey~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~ 220 (451)
T 3ryc_A 141 FGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 220 (451)
T ss_dssp SSSHHHHHHHHHHHHHHHHHTTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCS
T ss_pred cCCCCCccHHHHHHHHHHHhcCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCC
Confidence 799999999887655 677887 6889999999999999999999999999999999999999999999998777886
Q ss_pred -HHHHHHHHHHHhhhhhcccceecCceeeechHHHHHhhhcc-CceeEEEeeecCcc---------hHHHHHHHHh--hC
Q 024548 77 -EAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANA-GSSLMGIGTATGKT---------RARDAALNAI--QS 143 (266)
Q Consensus 77 -~af~~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~~~-g~a~~g~G~a~g~~---------r~~~A~~~Al--~s 143 (266)
++|..+|++|+++|++||.++|+||.+|+|+.|++++|.|+ .+||+..+++|-.. ...+.+++.+ .+
T Consensus 221 ~p~y~~lN~lIa~~~s~iT~slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n 300 (451)
T 3ryc_A 221 RPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300 (451)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGG
T ss_pred CCCchhhHHHHHhcccccccccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhcccc
Confidence 59999999999999999999999999999999999999998 69999999998422 2333333332 23
Q ss_pred CCccCCcccccceEEeecCCCCCCHHHHHHHHHHHHhhcC------CCCcEEEEEEeCCCC--------CCeEEEEEEee
Q 024548 144 PLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVD------PTANLIFGAVIDPSL--------SGQVSITLIAT 209 (266)
Q Consensus 144 pLl~~~i~~Ak~ilv~i~~g~di~l~ei~~~~~~i~~~~~------~~a~Ii~G~~~d~~~--------~~~v~VtvIat 209 (266)
.+..+++..++++.+....+.+++++|+++++..|+++.. .+..++.|++..|+. +-+..+++|+.
T Consensus 301 ~m~~~dp~~gky~a~~~~~RG~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsN 380 (451)
T 3ryc_A 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 380 (451)
T ss_dssp BSSCCCGGGSCEEEEEEEEEESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEE
T ss_pred ceEecCCCCCchheehhhcccCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecC
Confidence 3456788888998876664449999999999999998643 368899999988775 45688888874
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.60 E-value=1.1e-15 Score=136.33 Aligned_cols=104 Identities=18% Similarity=0.262 Sum_probs=89.0
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhHhHHH---HHHHHHHHHhcCCEEEEEeChhhhhhhcCCCCHHH
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQ---AQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTE 77 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~n---A~~gl~~L~~~~D~~ividNd~L~~~~~~~~~l~~ 77 (266)
||||||||+||+++++||+.|+++++||+.| .|+..+..| |..+|+.|.+.+|+.|||| |++. .++++.
T Consensus 90 LGGGTGTGaAPVvAeiake~GalvVavVt~~--~E~~~~~~Nai~al~~LE~La~~~dt~Iv~d---~Len-~~~lp~-- 161 (315)
T 3r4v_A 90 LGGGSGSVLGPLITGQLADRKASFVSFVVGA--MESTDNLGNDIDTMKTLEAIAVNKHLPIVVN---YVPN-TQGRSY-- 161 (315)
T ss_dssp SSSSSHHHHHHHHHHHHHHTTCCEEEEEEEC--CSSHHHHHHHHHHHHHHHHHHHHHTSCEEEE---EEEC-CTTCCH--
T ss_pred cCCccccchHHHHHHHHHHcCCCEEEEEecC--CCcchhhhchHHHHHHHHHHHhccCCcEEEe---cccc-CCCCch--
Confidence 8999999999999999999999999999999 666778888 6888999999999999999 7774 356665
Q ss_pred HHHHHHHHHHhhhhhcccceecCceeeechHHHHHhhh
Q 024548 78 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMA 115 (266)
Q Consensus 78 af~~~n~vl~~~I~gIt~~i~~~G~iNvDfaDv~tvL~ 115 (266)
+.+|+.+...+..+..++ .++..-+|..|+.....
T Consensus 162 --~~lN~eia~rL~al~~l~-~~~~~~ld~~di~n~~~ 196 (315)
T 3r4v_A 162 --ESINDEIAEKIRKVVLLV-NQNHGRLDVHDVANWVR 196 (315)
T ss_dssp --HHHHHHHHHHHHHHHHHT-SSCSBTCCHHHHHHHHS
T ss_pred --HHHHHHHHHHHHHHHHHh-ccCcccccHHHHhhHhh
Confidence 788888888887766554 56778899999998765
No 18
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=34.36 E-value=1.3e+02 Score=24.82 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=38.3
Q ss_pred CCCCCchHHHHHHHHHHcCCcEEEEEecCCc--chhhHhHHHHHHHHHHHHhcCCEEEEEeCh
Q 024548 3 GGTGTGGAPVIAGVAKSMGILTVGIVTTPFS--FEGRRRAVQAQEGIASLRDNVDTLIVIPND 63 (266)
Q Consensus 3 GGTGSGaapvia~iake~g~ltv~Vvt~Pf~--~Eg~~r~~nA~~gl~~L~~~~D~~ividNd 63 (266)
|..|||=+-++..+|++++...+.+....+. +-|.. .......+.......-+++++|.=
T Consensus 58 G~~GtGKT~la~~la~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~vl~iDEi 119 (285)
T 3h4m_A 58 GPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEG-ASLVKDIFKLAKEKAPSIIFIDEI 119 (285)
T ss_dssp SSSSSSHHHHHHHHHHHTTCEEEEEEGGGGCCCSTTHH-HHHHHHHHHHHHHTCSEEEEEETT
T ss_pred CCCCCcHHHHHHHHHHHhCCCEEEEehHHHHHhccchH-HHHHHHHHHHHHHcCCeEEEEECH
Confidence 8899999999889999999877776554432 22211 112223344445555578999873
No 19
>2i9o_A MHB8A peptide; beta-hairpin, alpha-helix, de novo protein; NMR {Synthetic}
Probab=33.03 E-value=35 Score=19.85 Aligned_cols=18 Identities=28% Similarity=0.562 Sum_probs=9.1
Q ss_pred CCCCCchHHHHHHHHHHc
Q 024548 3 GGTGTGGAPVIAGVAKSM 20 (266)
Q Consensus 3 GGTGSGaapvia~iake~ 20 (266)
||-||.+-....+||..|
T Consensus 17 ggggsaaeayakriaeam 34 (37)
T 2i9o_A 17 GGGGSAAEAYAKRIAEAM 34 (37)
T ss_dssp CCSCSSHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHH
Confidence 333444444555666554
No 20
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=31.80 E-value=51 Score=26.51 Aligned_cols=37 Identities=27% Similarity=0.303 Sum_probs=29.4
Q ss_pred HHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChh
Q 024548 13 IAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDK 64 (266)
Q Consensus 13 ia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~ 64 (266)
+++.||+.|+.+++|...+.+ .|.+.+|.++.++...
T Consensus 108 ~~~~ak~~g~~vI~IT~~~~s---------------~La~~ad~~l~~~~~~ 144 (200)
T 1vim_A 108 ISKKAKDIGSKLVAVTGKRDS---------------SLAKMADVVMVVKGKM 144 (200)
T ss_dssp HHHHHHHHTCEEEEEESCTTS---------------HHHHHCSEEEECCSSC
T ss_pred HHHHHHHCCCeEEEEECCCCC---------------hHHHhCCEEEEECCcc
Confidence 678899999999998665543 4678899999988654
No 21
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=27.25 E-value=61 Score=28.20 Aligned_cols=43 Identities=30% Similarity=0.377 Sum_probs=32.0
Q ss_pred CCCchHHH---HHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeC
Q 024548 5 TGTGGAPV---IAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPN 62 (266)
Q Consensus 5 TGSGaapv---ia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividN 62 (266)
+.||-+|. .++.||+.|+.|++|.-.|.+ .|.+.+|.+|.++.
T Consensus 148 S~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S---------------~La~~AD~~I~~~~ 193 (306)
T 1nri_A 148 AASGRTPYVIAGLQYAKSLGALTISIASNPKS---------------EMAEIADIAIETIV 193 (306)
T ss_dssp CTTSCCHHHHHHHHHHHHHTCEEEEEESSTTC---------------HHHHHSSEEEECCC
T ss_pred ECCCCCHHHHHHHHHHHHCCCEEEEEECCCCC---------------hHHHhCCEEEEcCC
Confidence 34666664 556788999999999776654 46678999998874
No 22
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=26.74 E-value=2.5e+02 Score=22.58 Aligned_cols=61 Identities=16% Similarity=0.236 Sum_probs=37.8
Q ss_pred CCCCCchHHHHHHHHHHcCCcEEEEEecCCc--chhhHhHHHHHHHHHHHHhcCCEEEEEeChh
Q 024548 3 GGTGTGGAPVIAGVAKSMGILTVGIVTTPFS--FEGRRRAVQAQEGIASLRDNVDTLIVIPNDK 64 (266)
Q Consensus 3 GGTGSGaapvia~iake~g~ltv~Vvt~Pf~--~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~ 64 (266)
|-.|||=+-++..+|++.+...+.+-...+. +.|. ...+...-++......-++++||.=.
T Consensus 46 G~~GtGKT~la~~la~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~~~vl~iDeid 108 (262)
T 2qz4_A 46 GPPGCGKTLLAKAVATEAQVPFLAMAGAEFVEVIGGL-GAARVRSLFKEARARAPCIVYIDEID 108 (262)
T ss_dssp SCTTSSHHHHHHHHHHHHTCCEEEEETTTTSSSSTTH-HHHHHHHHHHHHHHTCSEEEEEECC-
T ss_pred CCCCCCHHHHHHHHHHHhCCCEEEechHHHHhhccCh-hHHHHHHHHHHHHhcCCeEEEEeCcc
Confidence 7899999988888999998877766554432 1121 11222233444445556888888743
No 23
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=26.36 E-value=39 Score=26.59 Aligned_cols=22 Identities=27% Similarity=0.578 Sum_probs=19.2
Q ss_pred CCCCCCCchHHHHHHHHHHcCC
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGI 22 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ 22 (266)
+.|+.|||=+-+...+++.+|+
T Consensus 7 i~G~~GsGKst~~~~la~~lg~ 28 (208)
T 3ake_A 7 IDGPSASGKSSVARRVAAALGV 28 (208)
T ss_dssp EECSTTSSHHHHHHHHHHHHTC
T ss_pred EECCCCCCHHHHHHHHHHhcCC
Confidence 3699999999999999998884
No 24
>2om2_B Regulator of G-protein signalling 14 goloco motif peptide; arginine finger, RGS14 goloco, signaling protein; HET: GDP; 2.20A {Homo sapiens} PDB: 1kjy_B* 3onw_C* 3qi2_C*
Probab=25.97 E-value=26 Score=21.09 Aligned_cols=10 Identities=40% Similarity=0.869 Sum_probs=8.7
Q ss_pred Cccccchhhh
Q 024548 247 GSVEIPEFLK 256 (266)
Q Consensus 247 ~~~~~p~~~~ 256 (266)
+++++|.|||
T Consensus 27 ~~~~lp~fl~ 36 (36)
T 2om2_B 27 EDLVLPEFLQ 36 (36)
T ss_dssp TTTCCCGGGC
T ss_pred cccccccccC
Confidence 6799999996
No 25
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=25.74 E-value=2.3e+02 Score=23.29 Aligned_cols=62 Identities=13% Similarity=0.212 Sum_probs=36.3
Q ss_pred CCCCCchHHHHHHHHHHcCCcEEEEEecCCcchhhH---hHHHHHHHHHHHHhcCCEEEEEeC-hhh
Q 024548 3 GGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRR---RAVQAQEGIASLRDNVDTLIVIPN-DKL 65 (266)
Q Consensus 3 GGTGSGaapvia~iake~g~ltv~Vvt~Pf~~Eg~~---r~~nA~~gl~~L~~~~D~~ividN-d~L 65 (266)
|-+|||=+-+...+|++.+...+.+.... ...|.. ........++......-.++++|. |.|
T Consensus 71 G~~GtGKT~la~~ia~~~~~~~~~i~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~vl~iDEid~l 136 (272)
T 1d2n_A 71 GPPHSGKTALAAKIAEESNFPFIKICSPD-KMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERL 136 (272)
T ss_dssp CSTTSSHHHHHHHHHHHHTCSEEEEECGG-GCTTCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHH
T ss_pred CCCCCcHHHHHHHHHHHhCCCEEEEeCHH-HhcCCchHHHHHHHHHHHHHHHhcCCcEEEEEChhhh
Confidence 78999999998889999888776664332 111111 111112223333334567888887 444
No 26
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=24.29 E-value=57 Score=26.42 Aligned_cols=35 Identities=17% Similarity=0.127 Sum_probs=23.6
Q ss_pred CCCCCchHHHHHHHHHHcCCcEEEEEe-cCCcchhhH
Q 024548 3 GGTGTGGAPVIAGVAKSMGILTVGIVT-TPFSFEGRR 38 (266)
Q Consensus 3 GGTGSGaapvia~iake~g~ltv~Vvt-~Pf~~Eg~~ 38 (266)
||+|||=+-...+++++ +..++-+.| .+|..|-..
T Consensus 6 Gg~~SGKS~~A~~la~~-~~~~~yiaT~~~~d~e~~~ 41 (180)
T 1c9k_A 6 GGARSGKSRHAEALIGD-APQVLYIATSQILDDEMAA 41 (180)
T ss_dssp ECTTSSHHHHHHHHHCS-CSSEEEEECCCC------C
T ss_pred CCCCCcHHHHHHHHHhc-CCCeEEEecCCCCCHHHHH
Confidence 89999999988889887 877777878 456555443
No 27
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=24.06 E-value=38 Score=27.49 Aligned_cols=25 Identities=28% Similarity=0.389 Sum_probs=20.9
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcEE
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILTV 25 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~ltv 25 (266)
++|..|||-+.|-..+|+.+|...+
T Consensus 11 i~g~~GsGk~ti~~~la~~lg~~~~ 35 (201)
T 3fdi_A 11 IGREFGSGGHLVAKKLAEHYNIPLY 35 (201)
T ss_dssp EEECTTSSHHHHHHHHHHHTTCCEE
T ss_pred EeCCCCCCHHHHHHHHHHHhCcCEE
Confidence 3688999999999999999986543
No 28
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=23.84 E-value=66 Score=28.32 Aligned_cols=54 Identities=17% Similarity=0.209 Sum_probs=36.8
Q ss_pred CCch-HHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEE
Q 024548 6 GTGG-APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVI 60 (266)
Q Consensus 6 GSGa-apvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ivi 60 (266)
|.|. +--+|+.++.+|..+++.=..|...++.... .....++++.+.+|.+++-
T Consensus 146 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~-~~~~~l~ell~~aDiV~l~ 200 (315)
T 3pp8_A 146 GAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESY-VGREELRAFLNQTRVLINL 200 (315)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE-ESHHHHHHHHHTCSEEEEC
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh-cccCCHHHHHhhCCEEEEe
Confidence 5665 6678999999998887776666544432211 1125788899999988764
No 29
>1t0c_A Insulin; type I beta-turn, BEND, type III' beta-turn, hormone/growth factor complex; NMR {Homo sapiens}
Probab=23.35 E-value=29 Score=19.44 Aligned_cols=9 Identities=56% Similarity=1.365 Sum_probs=7.2
Q ss_pred CCCCCCCch
Q 024548 1 MGGGTGTGG 9 (266)
Q Consensus 1 lGGGTGSGa 9 (266)
||||-|.|.
T Consensus 12 lgggpgags 20 (31)
T 1t0c_A 12 LGGGPGAGS 20 (31)
T ss_dssp CCCSTTSSS
T ss_pred ecCCCCccc
Confidence 688888875
No 30
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=23.25 E-value=96 Score=24.16 Aligned_cols=37 Identities=27% Similarity=0.372 Sum_probs=28.9
Q ss_pred HHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEEeChh
Q 024548 13 IAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDK 64 (266)
Q Consensus 13 ia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~ 64 (266)
+++.||+.|+.+++|...+.+ .|.+.+|.++.++...
T Consensus 98 ~~~~ak~~g~~vi~IT~~~~s---------------~l~~~ad~~l~~~~~~ 134 (186)
T 1m3s_A 98 TAAKAKSLHGIVAALTINPES---------------SIGKQADLIIRMPGSP 134 (186)
T ss_dssp HHHHHHHTTCEEEEEESCTTS---------------HHHHHCSEEEECSCCS
T ss_pred HHHHHHHCCCEEEEEECCCCC---------------chHHhCCEEEEeCCcc
Confidence 678889999999998665542 3678899999988654
No 31
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=21.60 E-value=2.1e+02 Score=25.27 Aligned_cols=61 Identities=18% Similarity=0.162 Sum_probs=35.2
Q ss_pred CCCCCCchHHHHHHHHHHcCCcEEEEEecCCcc--hhhHhHHHHHHHHHHHHhcCCEEEEEeCh
Q 024548 2 GGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSF--EGRRRAVQAQEGIASLRDNVDTLIVIPND 63 (266)
Q Consensus 2 GGGTGSGaapvia~iake~g~ltv~Vvt~Pf~~--Eg~~r~~nA~~gl~~L~~~~D~~ividNd 63 (266)
=|-+|||=+-++..+|++.+...+.+-..-+.. -|... ..-..-+.......-++|+||.=
T Consensus 154 ~GppGtGKT~la~aia~~~~~~~~~v~~~~l~~~~~g~~~-~~~~~~~~~a~~~~~~il~iDEi 216 (389)
T 3vfd_A 154 FGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE-KLVRALFAVARELQPSIIFIDQV 216 (389)
T ss_dssp ESSTTSCHHHHHHHHHHHTTCEEEEECSCCC-------CH-HHHHHHHHHHHHSSSEEEEEETG
T ss_pred ECCCCCCHHHHHHHHHHhhcCcEEEeeHHHhhccccchHH-HHHHHHHHHHHhcCCeEEEEECc
Confidence 388999999998889999998776664433211 11110 11112223334444578899873
No 32
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=21.50 E-value=1.9e+02 Score=23.04 Aligned_cols=45 Identities=9% Similarity=-0.059 Sum_probs=31.0
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcCCEEEEE
Q 024548 10 APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVI 60 (266)
Q Consensus 10 apvia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~D~~ivi 60 (266)
++.+++..+++|+.+..+.+.|-..+-- ...|+++.+.+|.+|+-
T Consensus 25 ~~~l~~~L~~~G~~v~~~~iv~Dd~~~I------~~~l~~a~~~~DlVitt 69 (172)
T 3kbq_A 25 AAFIGNFLTYHGYQVRRGFVVMDDLDEI------GWAFRVALEVSDLVVSS 69 (172)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECSCHHHH------HHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHHHH------HHHHHHHHhcCCEEEEc
Confidence 6788999999998777776666654422 23455555668888775
No 33
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=21.43 E-value=1.9e+02 Score=24.76 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=36.5
Q ss_pred CCCCCCchHHHHHHHHHHcCCcEEEEEecCC--cchhhHhHHHHHHHHHHHHhcCCEEEEEeChh
Q 024548 2 GGGTGTGGAPVIAGVAKSMGILTVGIVTTPF--SFEGRRRAVQAQEGIASLRDNVDTLIVIPNDK 64 (266)
Q Consensus 2 GGGTGSGaapvia~iake~g~ltv~Vvt~Pf--~~Eg~~r~~nA~~gl~~L~~~~D~~ividNd~ 64 (266)
=|-.|||=+-++..+|++.+...+.|-..-+ .+-|... ..-..-++..+...-++|+||.=.
T Consensus 57 ~GppGtGKT~la~aia~~~~~~~~~v~~~~l~~~~~g~~~-~~~~~~f~~a~~~~~~vl~iDEid 120 (322)
T 3eie_A 57 YGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESE-KLVKQLFAMARENKPSIIFIDQVD 120 (322)
T ss_dssp ECSSSSCHHHHHHHHHHHHTCEEEEEEHHHHHTTTGGGHH-HHHHHHHHHHHHTSSEEEEEECGG
T ss_pred ECCCCCcHHHHHHHHHHHHCCCEEEEchHHHhhcccchHH-HHHHHHHHHHHhcCCeEEEechhh
Confidence 3789999999888899998887776643221 1111111 111122333444555789998743
No 34
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=21.19 E-value=43 Score=27.89 Aligned_cols=24 Identities=29% Similarity=0.396 Sum_probs=20.5
Q ss_pred CCCCCCCchHHHHHHHHHHcCCcE
Q 024548 1 MGGGTGTGGAPVIAGVAKSMGILT 24 (266)
Q Consensus 1 lGGGTGSGaapvia~iake~g~lt 24 (266)
++|+.|||-+.+-..+|+.+|+..
T Consensus 19 i~g~~gsGk~~i~~~la~~lg~~~ 42 (223)
T 3hdt_A 19 IEREYGSGGRIVGKKLAEELGIHF 42 (223)
T ss_dssp EEECTTSCHHHHHHHHHHHHTCEE
T ss_pred EeCCCCCCHHHHHHHHHHHcCCcE
Confidence 368899999999999999998654
No 35
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=20.11 E-value=3.3e+02 Score=21.63 Aligned_cols=45 Identities=13% Similarity=0.263 Sum_probs=32.8
Q ss_pred CCchHHH---HHHHHHHcCCcEEEEEecCCcchhhHhHHHHHHHHHHHHhcC---CEEEEEeChhh
Q 024548 6 GTGGAPV---IAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNV---DTLIVIPNDKL 65 (266)
Q Consensus 6 GSGaapv---ia~iake~g~ltv~Vvt~Pf~~Eg~~r~~nA~~gl~~L~~~~---D~~ividNd~L 65 (266)
.||-++- +++.||+.|+.+++|...|.+ .|.+.+ |.++.++.+.-
T Consensus 123 ~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s---------------~la~~a~~~d~~l~~~~~~~ 173 (201)
T 3trj_A 123 TSGDSENILSAVEEAHDLEMKVIALTGGSGG---------------ALQNMYNTDDIELRVPSDNI 173 (201)
T ss_dssp SSSCCHHHHHHHHHHHHTTCEEEEEEETTCC---------------GGGGTCCTTCEEEEESCCCH
T ss_pred CCCCCHHHHHHHHHHHHCCCcEEEEECCCCC---------------HHHHhhccCCEEEEeCCCCc
Confidence 4555442 667788999999999766653 256778 99999988754
Done!