Query 024549
Match_columns 266
No_of_seqs 256 out of 2060
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 05:26:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024549.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024549hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 3.6E-72 7.7E-77 473.0 12.8 244 2-246 46-290 (303)
2 KOG0374 Serine/threonine speci 100.0 3E-69 6.4E-74 486.7 21.4 242 1-242 61-304 (331)
3 PTZ00480 serine/threonine-prot 100.0 3.8E-68 8.2E-73 478.0 24.8 246 1-246 61-306 (320)
4 PTZ00244 serine/threonine-prot 100.0 5.3E-67 1.1E-71 467.5 23.2 240 1-240 54-293 (294)
5 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 6.3E-67 1.4E-71 467.5 23.5 241 1-241 52-292 (293)
6 cd07420 MPP_RdgC Drosophila me 100.0 1.4E-66 2.9E-71 468.5 25.1 237 1-238 53-320 (321)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 8.8E-67 1.9E-71 464.9 23.3 241 1-242 44-285 (285)
8 PTZ00239 serine/threonine prot 100.0 7E-66 1.5E-70 461.7 24.4 244 1-245 45-290 (303)
9 smart00156 PP2Ac Protein phosp 100.0 1.1E-65 2.5E-70 455.7 25.4 241 1-241 30-270 (271)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 3.3E-65 7.1E-70 460.2 22.2 242 1-243 62-306 (316)
11 cd07416 MPP_PP2B PP2B, metallo 100.0 1.7E-64 3.7E-69 454.4 25.1 242 1-243 45-299 (305)
12 KOG0373 Serine/threonine speci 100.0 1.4E-64 3E-69 421.2 12.6 243 3-246 49-294 (306)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 9.9E-63 2.2E-67 444.5 23.8 240 1-240 50-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 3.2E-60 7E-65 433.3 24.8 240 1-241 68-366 (377)
15 KOG0375 Serine-threonine phosp 100.0 3.1E-58 6.8E-63 406.0 8.1 236 2-238 90-339 (517)
16 KOG0371 Serine/threonine prote 100.0 6.1E-57 1.3E-61 382.9 10.6 244 2-246 63-307 (319)
17 KOG0377 Protein serine/threoni 100.0 9.2E-51 2E-55 366.1 8.5 248 2-250 167-441 (631)
18 KOG0376 Serine-threonine phosp 100.0 1.4E-45 3.1E-50 338.4 10.8 240 3-243 218-460 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.4E-37 3E-42 268.3 20.6 214 2-226 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 100.0 2.7E-28 5.8E-33 208.9 16.6 176 2-212 1-197 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 100.0 3.8E-27 8.2E-32 206.7 17.8 120 1-122 3-146 (245)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 2.2E-26 4.7E-31 199.1 16.9 116 1-119 1-143 (222)
23 PRK00166 apaH diadenosine tetr 99.9 6.9E-26 1.5E-30 201.2 17.5 215 1-230 3-261 (275)
24 cd07422 MPP_ApaH Escherichia c 99.9 4E-26 8.6E-31 200.8 12.6 147 1-152 1-159 (257)
25 cd07423 MPP_PrpE Bacillus subt 99.9 9.1E-25 2E-29 190.3 17.7 118 1-121 3-142 (234)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 2.1E-25 4.5E-30 196.9 11.3 126 1-131 3-135 (279)
27 cd07421 MPP_Rhilphs Rhilph pho 99.9 3.2E-24 7E-29 189.8 16.3 187 1-216 4-283 (304)
28 PRK11439 pphA serine/threonine 99.9 1.2E-24 2.6E-29 187.7 13.2 175 1-214 19-208 (218)
29 PHA02239 putative protein phos 99.9 3.2E-24 6.9E-29 186.8 14.3 172 1-214 3-221 (235)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 4.1E-23 8.8E-28 176.7 11.3 166 1-197 3-183 (207)
31 PRK09968 serine/threonine-spec 99.9 3.1E-22 6.7E-27 172.7 11.6 113 1-119 17-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 7.8E-13 1.7E-17 105.5 11.7 157 1-193 3-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.4 1.9E-11 4E-16 99.4 15.2 82 1-119 2-86 (155)
34 TIGR00040 yfcE phosphoesterase 99.3 1.5E-10 3.3E-15 94.6 13.6 61 1-70 3-64 (158)
35 PF12850 Metallophos_2: Calcin 99.3 1.4E-10 3E-15 93.6 13.1 150 1-228 3-152 (156)
36 cd07388 MPP_Tt1561 Thermus the 99.2 5.2E-10 1.1E-14 96.8 16.0 69 1-70 7-75 (224)
37 cd07379 MPP_239FB Homo sapiens 99.2 1.4E-10 3.1E-15 92.3 9.9 117 1-198 2-120 (135)
38 PRK09453 phosphodiesterase; Pr 99.2 1.7E-10 3.7E-15 96.6 9.1 67 1-71 3-77 (182)
39 cd07392 MPP_PAE1087 Pyrobaculu 99.0 2.3E-09 5.1E-14 89.1 11.4 66 1-72 1-67 (188)
40 cd07397 MPP_DevT Myxococcus xa 99.0 2.4E-09 5.2E-14 93.2 11.3 155 1-194 3-208 (238)
41 cd07394 MPP_Vps29 Homo sapiens 99.0 4.4E-08 9.5E-13 82.0 16.6 58 1-70 2-65 (178)
42 cd00838 MPP_superfamily metall 98.9 9.6E-09 2.1E-13 79.1 10.2 117 2-198 1-119 (131)
43 COG0639 ApaH Diadenosine tetra 98.9 2.9E-09 6.3E-14 84.3 6.9 142 73-215 4-154 (155)
44 cd07404 MPP_MS158 Microscilla 98.9 5.2E-09 1.1E-13 86.0 7.8 67 1-70 1-68 (166)
45 cd07403 MPP_TTHA0053 Thermus t 98.8 6.9E-08 1.5E-12 76.5 10.1 107 2-198 1-107 (129)
46 cd07400 MPP_YydB Bacillus subt 98.8 1.7E-07 3.8E-12 74.9 12.6 117 1-198 1-129 (144)
47 PRK05340 UDP-2,3-diacylglucosa 98.8 2.9E-07 6.2E-12 80.5 14.8 203 1-231 3-232 (241)
48 TIGR01854 lipid_A_lpxH UDP-2,3 98.7 1.2E-07 2.7E-12 82.3 10.5 205 1-230 1-229 (231)
49 TIGR03729 acc_ester putative p 98.6 3.9E-07 8.4E-12 79.5 12.0 67 1-70 2-74 (239)
50 COG2129 Predicted phosphoester 98.6 4.9E-06 1.1E-10 71.2 17.4 203 1-230 6-217 (226)
51 cd07399 MPP_YvnB Bacillus subt 98.6 2.2E-06 4.9E-11 73.6 15.2 192 1-240 3-213 (214)
52 COG0622 Predicted phosphoester 98.5 7.9E-06 1.7E-10 67.9 15.0 156 1-240 4-165 (172)
53 cd07383 MPP_Dcr2 Saccharomyces 98.4 8.6E-06 1.9E-10 69.0 14.4 68 1-68 5-87 (199)
54 PRK11148 cyclic 3',5'-adenosin 98.4 2.2E-05 4.9E-10 69.8 15.9 68 1-70 17-98 (275)
55 cd07396 MPP_Nbla03831 Homo sap 98.3 1.2E-05 2.7E-10 71.3 13.8 72 1-72 3-88 (267)
56 cd07395 MPP_CSTP1 Homo sapiens 98.3 2.9E-05 6.4E-10 68.4 16.0 69 2-70 8-99 (262)
57 PRK11340 phosphodiesterase Yae 98.3 1E-06 2.2E-11 78.5 6.7 68 1-70 52-125 (271)
58 cd07402 MPP_GpdQ Enterobacter 98.3 9.6E-06 2.1E-10 70.2 12.7 68 1-70 2-83 (240)
59 cd07393 MPP_DR1119 Deinococcus 98.3 9.5E-06 2.1E-10 70.5 11.6 68 1-70 1-84 (232)
60 cd07385 MPP_YkuE_C Bacillus su 98.3 1.4E-06 3.1E-11 74.6 6.3 69 1-71 4-77 (223)
61 cd07398 MPP_YbbF-LpxH Escheric 98.3 9.8E-07 2.1E-11 75.3 5.0 69 2-71 1-83 (217)
62 PRK04036 DNA polymerase II sma 98.2 8.6E-06 1.9E-10 78.7 11.2 110 1-117 246-387 (504)
63 cd08165 MPP_MPPE1 human MPPE1 98.1 2.5E-05 5.4E-10 63.9 10.3 48 24-71 37-90 (156)
64 COG2908 Uncharacterized protei 98.1 2.1E-05 4.5E-10 68.0 9.5 199 2-233 1-230 (237)
65 COG1409 Icc Predicted phosphoh 98.1 0.00014 3E-09 64.3 14.6 72 1-73 3-81 (301)
66 cd07401 MPP_TMEM62_N Homo sapi 98.0 4.9E-05 1.1E-09 67.1 10.4 71 1-71 2-90 (256)
67 cd07391 MPP_PF1019 Pyrococcus 98.0 2E-05 4.3E-10 65.3 7.3 58 14-71 30-89 (172)
68 TIGR00619 sbcd exonuclease Sbc 98.0 1.3E-05 2.9E-10 70.6 6.6 71 1-71 3-89 (253)
69 PHA02546 47 endonuclease subun 97.9 2.2E-05 4.8E-10 72.2 6.7 70 1-70 3-89 (340)
70 PF06874 FBPase_2: Firmicute f 97.9 0.00011 2.4E-09 71.2 11.5 69 170-240 507-585 (640)
71 cd07390 MPP_AQ1575 Aquifex aeo 97.8 4.1E-05 8.8E-10 63.2 6.3 67 1-72 1-84 (168)
72 cd00840 MPP_Mre11_N Mre11 nucl 97.8 4.4E-05 9.4E-10 65.1 6.4 73 1-73 2-92 (223)
73 TIGR00024 SbcD_rel_arch putati 97.7 0.00013 2.8E-09 63.4 7.6 67 1-71 17-103 (225)
74 cd07384 MPP_Cdc1_like Saccharo 97.7 0.00043 9.4E-09 57.4 10.3 49 23-71 43-101 (171)
75 PF14582 Metallophos_3: Metall 97.7 0.00022 4.9E-09 61.3 8.2 71 1-71 8-103 (255)
76 TIGR00583 mre11 DNA repair pro 97.6 0.0002 4.4E-09 67.3 7.2 71 1-71 6-124 (405)
77 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.5 0.00036 7.9E-09 61.9 7.4 70 1-70 1-86 (262)
78 PRK10966 exonuclease subunit S 97.5 0.00022 4.7E-09 67.2 6.0 70 1-71 3-88 (407)
79 COG1408 Predicted phosphohydro 97.4 0.00032 7E-09 62.9 6.6 71 1-73 47-121 (284)
80 cd00839 MPP_PAPs purple acid p 97.4 0.0017 3.7E-08 58.0 10.4 68 1-72 7-83 (294)
81 cd07386 MPP_DNA_pol_II_small_a 97.3 0.00052 1.1E-08 60.0 5.9 68 2-71 2-95 (243)
82 cd00845 MPP_UshA_N_like Escher 97.0 0.0012 2.6E-08 57.6 5.9 65 1-70 3-82 (252)
83 cd08166 MPP_Cdc1_like_1 unchar 97.0 0.0014 2.9E-08 55.6 5.8 46 25-70 42-93 (195)
84 COG4186 Predicted phosphoester 97.0 0.0017 3.7E-08 52.7 5.8 46 24-73 44-89 (186)
85 COG0420 SbcD DNA repair exonuc 96.8 0.0038 8.2E-08 58.4 7.1 72 2-73 4-91 (390)
86 cd07380 MPP_CWF19_N Schizosacc 96.6 0.0051 1.1E-07 50.0 6.1 119 2-193 1-121 (150)
87 cd08163 MPP_Cdc1 Saccharomyces 96.5 0.069 1.5E-06 47.2 13.0 25 168-192 202-226 (257)
88 cd07410 MPP_CpdB_N Escherichia 96.5 0.0044 9.5E-08 55.1 5.3 65 1-70 3-95 (277)
89 COG1311 HYS2 Archaeal DNA poly 96.3 0.15 3.2E-06 48.6 14.1 206 1-230 228-461 (481)
90 cd00842 MPP_ASMase acid sphing 96.3 0.069 1.5E-06 47.8 11.6 62 12-73 53-125 (296)
91 KOG3325 Membrane coat complex 96.1 0.088 1.9E-06 42.5 10.1 115 2-199 4-124 (183)
92 cd08164 MPP_Ted1 Saccharomyces 96.1 0.015 3.3E-07 49.2 6.0 65 6-70 24-111 (193)
93 cd07408 MPP_SA0022_N Staphyloc 96.1 0.011 2.4E-07 52.0 5.4 65 1-70 3-82 (257)
94 cd07412 MPP_YhcR_N Bacillus su 95.4 0.034 7.3E-07 49.9 5.8 65 1-70 3-88 (288)
95 PLN02533 probable purple acid 95.3 0.026 5.7E-07 53.6 5.0 68 1-71 142-212 (427)
96 COG1407 Predicted ICC-like pho 95.2 0.053 1.1E-06 47.2 6.3 67 2-71 23-111 (235)
97 cd07411 MPP_SoxB_N Thermus the 95.1 0.039 8.5E-07 48.8 5.3 63 2-70 4-95 (264)
98 cd07387 MPP_PolD2_C PolD2 (DNA 95.0 1.4 3.1E-05 39.0 14.9 49 183-236 204-255 (257)
99 cd07378 MPP_ACP5 Homo sapiens 94.6 0.092 2E-06 46.3 6.3 23 172-194 191-213 (277)
100 cd07409 MPP_CD73_N CD73 ecto-5 94.6 0.089 1.9E-06 47.0 6.2 65 1-70 3-94 (281)
101 COG1768 Predicted phosphohydro 94.5 0.083 1.8E-06 44.1 5.3 74 24-108 42-117 (230)
102 cd07406 MPP_CG11883_N Drosophi 93.8 0.11 2.4E-06 45.7 5.0 63 2-69 4-82 (257)
103 KOG3662 Cell division control 93.7 0.14 3E-06 48.1 5.6 56 14-69 81-143 (410)
104 PRK09419 bifunctional 2',3'-cy 93.4 0.11 2.3E-06 55.5 5.1 64 1-69 663-735 (1163)
105 KOG0376 Serine-threonine phosp 93.2 0.015 3.3E-07 55.0 -1.5 208 2-216 49-299 (476)
106 cd07405 MPP_UshA_N Escherichia 92.2 0.18 3.9E-06 45.1 4.2 65 1-70 3-87 (285)
107 PF04042 DNA_pol_E_B: DNA poly 90.2 0.44 9.6E-06 40.3 4.5 72 1-72 1-93 (209)
108 COG0737 UshA 5'-nucleotidase/2 89.7 0.43 9.2E-06 46.4 4.3 64 2-70 30-115 (517)
109 cd08162 MPP_PhoA_N Synechococc 89.4 0.6 1.3E-05 42.5 4.8 64 1-69 3-90 (313)
110 COG3855 Fbp Uncharacterized pr 89.4 0.43 9.3E-06 45.3 3.9 42 26-72 191-232 (648)
111 cd07407 MPP_YHR202W_N Saccharo 89.0 0.54 1.2E-05 42.1 4.2 38 28-70 53-97 (282)
112 KOG1432 Predicted DNA repair e 88.8 1.1 2.3E-05 41.1 5.9 49 23-72 98-149 (379)
113 TIGR01390 CycNucDiestase 2',3' 87.5 0.74 1.6E-05 46.0 4.5 64 1-69 5-98 (626)
114 PRK09420 cpdB bifunctional 2', 86.9 0.85 1.8E-05 45.7 4.5 63 2-69 29-121 (649)
115 PRK09419 bifunctional 2',3'-cy 86.6 0.86 1.9E-05 48.8 4.6 23 171-193 256-279 (1163)
116 PRK09558 ushA bifunctional UDP 85.9 0.92 2E-05 44.5 4.2 64 2-70 38-121 (551)
117 KOG3339 Predicted glycosyltran 85.4 9.3 0.0002 32.2 9.1 85 27-116 40-140 (211)
118 TIGR00282 metallophosphoestera 84.8 2.1 4.6E-05 38.1 5.5 65 1-70 3-71 (266)
119 KOG0918 Selenium-binding prote 84.4 0.073 1.6E-06 49.4 -4.0 192 28-230 50-250 (476)
120 KOG2310 DNA repair exonuclease 83.2 5.8 0.00013 38.6 8.0 43 10-52 37-79 (646)
121 PRK11907 bifunctional 2',3'-cy 83.0 1.9 4.1E-05 44.3 5.0 64 1-69 118-212 (814)
122 TIGR01530 nadN NAD pyrophospha 83.0 1.7 3.8E-05 42.6 4.6 65 1-70 3-94 (550)
123 cd07382 MPP_DR1281 Deinococcus 82.0 3.7 8.1E-05 36.3 5.9 65 1-70 2-70 (255)
124 KOG2863 RNA lariat debranching 81.5 3.3 7.2E-05 38.3 5.5 67 5-71 7-89 (456)
125 PRK09418 bifunctional 2',3'-cy 75.2 4.3 9.3E-05 41.6 4.7 17 178-194 272-289 (780)
126 KOG2476 Uncharacterized conser 74.1 7.8 0.00017 37.0 5.7 66 1-67 8-75 (528)
127 PTZ00235 DNA polymerase epsilo 70.9 16 0.00035 32.9 6.8 70 2-71 31-123 (291)
128 PTZ00422 glideosome-associated 67.7 11 0.00024 35.5 5.3 46 25-70 57-109 (394)
129 KOG3947 Phosphoesterases [Gene 66.0 8.1 0.00018 34.5 3.8 62 2-71 65-127 (305)
130 PF02875 Mur_ligase_C: Mur lig 51.8 39 0.00084 24.2 4.9 65 3-67 16-82 (91)
131 PF12641 Flavodoxin_3: Flavodo 49.3 1.1E+02 0.0024 24.9 7.7 102 2-122 2-116 (160)
132 PF06874 FBPase_2: Firmicute f 40.3 20 0.00044 35.6 2.3 40 28-72 187-226 (640)
133 PF13258 DUF4049: Domain of un 38.0 41 0.0009 29.5 3.5 87 27-120 86-186 (318)
134 PF15007 CEP44: Centrosomal sp 33.9 17 0.00036 28.9 0.5 21 6-26 1-21 (131)
135 TIGR00282 metallophosphoestera 33.7 53 0.0012 29.2 3.7 39 28-70 2-41 (266)
136 smart00854 PGA_cap Bacterial c 29.6 1.2E+02 0.0025 26.1 5.1 36 177-214 200-235 (239)
137 PF09949 DUF2183: Uncharacteri 29.5 1.8E+02 0.0039 21.8 5.5 23 11-35 13-35 (100)
138 PRK10773 murF UDP-N-acetylmura 29.5 2E+02 0.0043 27.3 7.2 61 4-65 330-392 (453)
139 COG1692 Calcineurin-like phosp 28.9 58 0.0013 28.7 3.0 35 28-64 2-37 (266)
140 PF08497 Radical_SAM_N: Radica 27.1 93 0.002 28.1 4.1 35 17-51 8-43 (302)
141 PLN00084 photosystem II subuni 27.0 36 0.00078 28.2 1.3 36 32-68 9-51 (214)
142 cd07382 MPP_DR1281 Deinococcus 26.1 61 0.0013 28.6 2.8 40 28-70 1-40 (255)
143 COG3958 Transketolase, C-termi 26.0 1.3E+02 0.0028 27.3 4.8 106 12-130 11-129 (312)
144 COG3855 Fbp Uncharacterized pr 25.8 31 0.00067 33.2 0.9 57 170-227 514-580 (648)
145 PRK00955 hypothetical protein; 21.9 1.2E+02 0.0026 30.4 4.2 34 18-51 6-40 (620)
146 COG3433 Aryl carrier domain [S 21.7 55 0.0012 23.2 1.2 22 33-54 22-43 (74)
147 PLN02965 Probable pheophorbida 21.6 2.8E+02 0.006 23.5 6.1 20 173-192 60-81 (255)
148 cd07381 MPP_CapA CapA and rela 20.9 1.8E+02 0.0039 24.8 4.7 36 177-214 202-237 (239)
149 cd01445 TST_Repeats Thiosulfat 20.4 3.2E+02 0.007 21.3 5.7 52 12-66 81-132 (138)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-72 Score=473.00 Aligned_cols=244 Identities=50% Similarity=0.978 Sum_probs=237.1
Q ss_pred EEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChHH
Q 024549 2 IYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 81 (266)
Q Consensus 2 i~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 81 (266)
.++|||||++.||..+|+.-|-++.++|+|||||||||-.|+|++.+|++||++||+++.+||||||.+.+++.|||++|
T Consensus 46 tvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~E 125 (303)
T KOG0372|consen 46 TVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDE 125 (303)
T ss_pred EEeecccchHHHHHHHHHhCCCCCCCceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHH
Confidence 46679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc-hhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549 82 CKRRFN-VRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE 160 (266)
Q Consensus 82 ~~~~~~-~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 160 (266)
|.++|+ ..+|+.+.+.|+.||++|+|++++||||||++|.+++++||+.+.|..+.|..+.++|+|||||.+. .+|.-
T Consensus 126 clrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~ 204 (303)
T KOG0372|consen 126 CLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGL 204 (303)
T ss_pred HHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCccc
Confidence 999995 6899999999999999999999999999999999999999999999999999999999999999865 69999
Q ss_pred CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEec
Q 024549 161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 240 (266)
Q Consensus 161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 240 (266)
++||+|+.||.+++++|++.||++.|+|+||.+.+||+..++++|+|||||||||+..+|.||||.|+++..-.|.+|+.
T Consensus 205 SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFea 284 (303)
T KOG0372|consen 205 SPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEA 284 (303)
T ss_pred CCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC
Q 024549 241 SEKKGK 246 (266)
Q Consensus 241 ~~~~~~ 246 (266)
++..++
T Consensus 285 a~~~~~ 290 (303)
T KOG0372|consen 285 APQESR 290 (303)
T ss_pred chhhhc
Confidence 998776
No 2
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3e-69 Score=486.69 Aligned_cols=242 Identities=73% Similarity=1.316 Sum_probs=236.1
Q ss_pred CEEEEccCCCHHHHHHHHHhcC-CCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGG-YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~-~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
|.++|||||++.+|.++|...| +|+.++|||||||||||++|+|++.+|+++|+++|+++++||||||.+.++..|||+
T Consensus 61 V~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFy 140 (331)
T KOG0374|consen 61 VKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFY 140 (331)
T ss_pred EEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeH
Confidence 3567799999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc-hhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCC
Q 024549 80 DECKRRFN-VRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGW 158 (266)
Q Consensus 80 ~e~~~~~~-~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 158 (266)
+||.++|+ ..+|+.+++.|..||++|+++++++|+|||++|.+.++++++.+.||.+.++.+++.|++||||.....+|
T Consensus 141 dE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~ 220 (331)
T KOG0374|consen 141 DECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGW 220 (331)
T ss_pred HHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCc
Confidence 99999998 69999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred ccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEE
Q 024549 159 GENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQIL 238 (266)
Q Consensus 159 ~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~ 238 (266)
.+|.||.++.||++++++||+++++++|+||||++++||+++.+++++||||||+||+.++|.||+|.||+++.++|+++
T Consensus 221 ~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l 300 (331)
T KOG0374|consen 221 EENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVIL 300 (331)
T ss_pred ccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccc
Q 024549 239 KASE 242 (266)
Q Consensus 239 ~~~~ 242 (266)
+|..
T Consensus 301 ~p~~ 304 (331)
T KOG0374|consen 301 RPEG 304 (331)
T ss_pred cccc
Confidence 9964
No 3
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=3.8e-68 Score=477.97 Aligned_cols=246 Identities=78% Similarity=1.426 Sum_probs=237.1
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
+++|||||||+.+|.++|+..++++.+++||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..
T Consensus 61 i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~ 140 (320)
T PTZ00480 61 LKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD 140 (320)
T ss_pred eEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549 81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE 160 (266)
Q Consensus 81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 160 (266)
|+..+|+..+|..+.++|+.||++|++++++|||||||+|.+.++++++.+.||.+.++.+++.|+|||||.....+|.+
T Consensus 141 e~~~~y~~~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~ 220 (320)
T PTZ00480 141 ECKRRYTIKLWKTFTDCFNCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWAD 220 (320)
T ss_pred HHHhhcCHHHHHHHHHHHHhccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987789999
Q ss_pred CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEec
Q 024549 161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 240 (266)
Q Consensus 161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 240 (266)
++||.+++||++++++||++|++++||||||++++||+++++++|+||||||+||+..+|+||++.|++++++.|++++|
T Consensus 221 s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p 300 (320)
T PTZ00480 221 NERGVSYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKP 300 (320)
T ss_pred CCCCCccccCHHHHHHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccCC
Q 024549 241 SEKKGK 246 (266)
Q Consensus 241 ~~~~~~ 246 (266)
.+.+..
T Consensus 301 ~~~~~~ 306 (320)
T PTZ00480 301 AEQGQG 306 (320)
T ss_pred Cccccc
Confidence 876543
No 4
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=5.3e-67 Score=467.51 Aligned_cols=240 Identities=64% Similarity=1.184 Sum_probs=231.7
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
+.+|||||||+.+|.++|+..++++.++++|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~ 133 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFD 133 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549 81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE 160 (266)
Q Consensus 81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 160 (266)
++..+|+..+|+.+.++|+.||++++++++++|||||++|.+.++++++.++||.+.++.+++.|+|||||.....+|.+
T Consensus 134 e~~~~y~~~l~~~~~~~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~ 213 (294)
T PTZ00244 134 DVKRRYNIKLFKAFTDVFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLE 213 (294)
T ss_pred HHHHHhhHHHHHHHHHHHHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999987789999
Q ss_pred CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEec
Q 024549 161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 240 (266)
Q Consensus 161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 240 (266)
++||.+++||++++++||++||+++||||||++++||+++++++|+|||||||||+..+|+||+|.|++++.++|.++++
T Consensus 214 ~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 214 SDRGVSYLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred CCCCCccccCHHHHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
No 5
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=6.3e-67 Score=467.47 Aligned_cols=241 Identities=83% Similarity=1.492 Sum_probs=233.5
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
+++|||||||+.+|.++|+..++++.+++||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..
T Consensus 52 i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~ 131 (293)
T cd07414 52 LKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD 131 (293)
T ss_pred eEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhh
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549 81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE 160 (266)
Q Consensus 81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 160 (266)
|+..+|+..+|..+.++|+.||++++++++++|||||++|...++++++.+.||.+.+..+++.|+|||||.....+|.+
T Consensus 132 e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~ 211 (293)
T cd07414 132 ECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGE 211 (293)
T ss_pred HHHHhhhHHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999988889999
Q ss_pred CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEec
Q 024549 161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 240 (266)
Q Consensus 161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 240 (266)
++||.++.||++++++||++||+++||||||++++||+++++++|+||||||+||+..+|+||+|.|++++++.|.+++|
T Consensus 212 ~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~ 291 (293)
T cd07414 212 NDRGVSFTFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 291 (293)
T ss_pred CCCCcceecCHHHHHHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred c
Q 024549 241 S 241 (266)
Q Consensus 241 ~ 241 (266)
.
T Consensus 292 ~ 292 (293)
T cd07414 292 A 292 (293)
T ss_pred C
Confidence 5
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.4e-66 Score=468.51 Aligned_cols=237 Identities=37% Similarity=0.637 Sum_probs=216.9
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCC-CceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPP-EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~-~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
+++|||||||+.+|.++|+..++++ .+++||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||.
T Consensus 53 ~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~ 132 (321)
T cd07420 53 VTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFT 132 (321)
T ss_pred eEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChH
Confidence 3689999999999999999999885 468999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc---hhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCC-----CCC------------
Q 024549 80 DECKRRFN---VRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVD-----VPD------------ 139 (266)
Q Consensus 80 ~e~~~~~~---~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~-----~~~------------ 139 (266)
+|+..+|+ ..+|..+.++|+.||++|++++++|||||||+| ..++++++.++|+.. .+.
T Consensus 133 ~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~ 211 (321)
T cd07420 133 KEVMSKYKLHGKKILRLLEDVFSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEE 211 (321)
T ss_pred HHHHHHhCccHHHHHHHHHHHHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccc
Confidence 99999996 689999999999999999999999999999997 568999999887421 010
Q ss_pred ----------cchhhhhhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEe
Q 024549 140 ----------QGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVF 209 (266)
Q Consensus 140 ----------~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itif 209 (266)
.+++.|+|||||......|.+++||.+++||++++++||++|++++||||||++++||++.++++|+|||
T Consensus 212 ~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvF 291 (321)
T cd07420 212 DPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIF 291 (321)
T ss_pred cccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEe
Confidence 1467899999998665557777899999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcEEEEEEcCCCceEEEEE
Q 024549 210 SAPNYCGEFDNAGAMMSVDDTLTCSFQIL 238 (266)
Q Consensus 210 Sa~~y~~~~~n~ga~l~i~~~~~~~~~~~ 238 (266)
||||||+..+|+||+|.|++++.++|+++
T Consensus 292 Sa~nY~~~~~N~gavl~i~~~~~~~f~~~ 320 (321)
T cd07420 292 SASNYYEEGSNRGAYIKLGPDLTPHFVQY 320 (321)
T ss_pred cCCccCCCCCccEEEEEECCCCceeEEEe
Confidence 99999999999999999999999888765
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=8.8e-67 Score=464.86 Aligned_cols=241 Identities=54% Similarity=1.012 Sum_probs=231.6
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
+++|||||||+.+|.++|+..++++.+++||||||||||++|+|++.++++||+.+|.++++||||||.+.++..|||..
T Consensus 44 i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~ 123 (285)
T cd07415 44 VTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYD 123 (285)
T ss_pred EEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhch-hhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCc
Q 024549 81 ECKRRFNV-RVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG 159 (266)
Q Consensus 81 e~~~~~~~-~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~ 159 (266)
|+..+|+. .+|+.+.++|+.||++|+++++++||||||+|...+++++++++||.+.+.++.+.|+|||||... .+|.
T Consensus 124 e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~ 202 (285)
T cd07415 124 ECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWG 202 (285)
T ss_pred HHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCC
Confidence 99999974 899999999999999999999999999999999999999999999999888899999999999865 7899
Q ss_pred cCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEe
Q 024549 160 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILK 239 (266)
Q Consensus 160 ~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 239 (266)
+++||.++.||++++++||++||+++||||||++++||++.++++|+||||||+||+..+|+||+|.|++++++.|.+++
T Consensus 203 ~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~ 282 (285)
T cd07415 203 ISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFE 282 (285)
T ss_pred cCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 024549 240 ASE 242 (266)
Q Consensus 240 ~~~ 242 (266)
|.+
T Consensus 283 ~~~ 285 (285)
T cd07415 283 AAP 285 (285)
T ss_pred cCC
Confidence 864
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=7e-66 Score=461.72 Aligned_cols=244 Identities=48% Similarity=0.946 Sum_probs=231.5
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
+++|||||||+.+|.++|+..+.++.++++|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+
T Consensus 45 i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~ 124 (303)
T PTZ00239 45 VNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYE 124 (303)
T ss_pred EEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHH
Confidence 36889999999999999999999899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhch-hhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCc
Q 024549 81 ECKRRFNV-RVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG 159 (266)
Q Consensus 81 e~~~~~~~-~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~ 159 (266)
|+..+|+. .+|+.+.++|+.||++++++++++|||||++|...++++++.+.||.+.+.++.+.|+|||||.. ..+|.
T Consensus 125 e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~ 203 (303)
T PTZ00239 125 EILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWA 203 (303)
T ss_pred HHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCc
Confidence 99999964 78999999999999999999999999999999999999999999999998899999999999984 47899
Q ss_pred cCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecC-CeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEE
Q 024549 160 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAK-RQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQIL 238 (266)
Q Consensus 160 ~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~-~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~ 238 (266)
+++||.++.||++++++||++||+++||||||++++||++.++ ++|+|||||||||+..+|+||+|.+++++++.|.++
T Consensus 204 ~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~ 283 (303)
T PTZ00239 204 VNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTF 283 (303)
T ss_pred cCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEe
Confidence 9999999999999999999999999999999999999998765 559999999999999999999999999999999999
Q ss_pred ecccccC
Q 024549 239 KASEKKG 245 (266)
Q Consensus 239 ~~~~~~~ 245 (266)
+|.+.+.
T Consensus 284 ~~~~~~~ 290 (303)
T PTZ00239 284 KEVPESA 290 (303)
T ss_pred eCCCccc
Confidence 9988764
No 9
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1.1e-65 Score=455.68 Aligned_cols=241 Identities=59% Similarity=1.071 Sum_probs=232.6
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
+++|||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++||+.+|.++++||||||.+.++..|||..
T Consensus 30 i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~ 109 (271)
T smart00156 30 VTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYD 109 (271)
T ss_pred EEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHHHHhcCCCCEEEEeccccHHHHHHhccchh
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549 81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE 160 (266)
Q Consensus 81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 160 (266)
|+..+|+.++|+.+.++|+.||++++++++++|||||++|...++++++++.||.+.+.+..+.|+|||||.....+|.+
T Consensus 110 e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~ 189 (271)
T smart00156 110 ECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKLKRPQEPPDEGLLIDLLWSDPDQPVDGFQP 189 (271)
T ss_pred hhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcccCCCCCCchhhhhheeecCCCcccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999998888999999999999877789999
Q ss_pred CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEec
Q 024549 161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 240 (266)
Q Consensus 161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 240 (266)
|+||.++.||++++++||++||+++||||||++++||+.+++++|+|||||||||+..+|+||++.|+++++++|.+++|
T Consensus 190 ~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~ 269 (271)
T smart00156 190 SIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSAPNYCGRFGNKAAVLKVDKDLKLSFEQFKP 269 (271)
T ss_pred CCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECCcccccCCCceEEEEEECCCCcEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999999998886
Q ss_pred c
Q 024549 241 S 241 (266)
Q Consensus 241 ~ 241 (266)
.
T Consensus 270 ~ 270 (271)
T smart00156 270 G 270 (271)
T ss_pred C
Confidence 4
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=3.3e-65 Score=460.16 Aligned_cols=242 Identities=44% Similarity=0.817 Sum_probs=227.8
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCC-ceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
+++|||||||+.+|.++|+..++++. +++||||||||||++|+|++.++++||+.+|.++++||||||.+.++..|||.
T Consensus 62 ~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~ 141 (316)
T cd07417 62 ITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFE 141 (316)
T ss_pred eEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhc
Confidence 36889999999999999999998754 57999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCC-CCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCC
Q 024549 80 DECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGL-SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGW 158 (266)
Q Consensus 80 ~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi-~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 158 (266)
.|+..+|+..+|+.+.++|+.||++++++++++|||||+ ++...++++++++.|+.+.+.++++.|+|||||... .+|
T Consensus 142 ~e~~~k~~~~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~ 220 (316)
T cd07417 142 GEVKAKYNEQMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGR 220 (316)
T ss_pred chhhhcccHHHHHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCC
Confidence 999999999999999999999999999999999999999 456789999999999988888899999999999864 578
Q ss_pred ccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcC-CCceEEEE
Q 024549 159 GENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDD-TLTCSFQI 237 (266)
Q Consensus 159 ~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~-~~~~~~~~ 237 (266)
.+++||.++.||++++++||++||+++||||||++++||++.++++|+|||||||||+..+|+||+|.|++ ++++.|++
T Consensus 221 ~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~ 300 (316)
T cd07417 221 SPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQ 300 (316)
T ss_pred CccCCCCceEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999 89999999
Q ss_pred Eecccc
Q 024549 238 LKASEK 243 (266)
Q Consensus 238 ~~~~~~ 243 (266)
++|.+.
T Consensus 301 ~~~~~~ 306 (316)
T cd07417 301 FEAVPH 306 (316)
T ss_pred ccCCCC
Confidence 987643
No 11
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1.7e-64 Score=454.36 Aligned_cols=242 Identities=45% Similarity=0.855 Sum_probs=227.1
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
+++|||||||+.+|.++|+..+.++.+++||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|+|..
T Consensus 45 i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~ 124 (305)
T cd07416 45 VTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQ 124 (305)
T ss_pred EEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchh
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999998999999
Q ss_pred HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCC----
Q 024549 81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIE---- 156 (266)
Q Consensus 81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~---- 156 (266)
++..+|+.++|..+.++|+.||++++++++++|||||++|.+.++++++++.||.+.+..+++.|+|||||.....
T Consensus 125 e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~ 204 (305)
T cd07416 125 ECKIKYSERVYDACMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKT 204 (305)
T ss_pred HHHHhccHHHHHHHHHHHhhccceeEEcCCEEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999888889999999999975432
Q ss_pred --CCccC-CCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCC------eEEEEecCCCCCCCCCCcEEEEEE
Q 024549 157 --GWGEN-DRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKR------QLVTVFSAPNYCGEFDNAGAMMSV 227 (266)
Q Consensus 157 --~~~~~-~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~ga~l~i 227 (266)
+|.++ +||.++.||++++++||++||+++||||||++++||++++++ +|+|||||||||+..+|+||+|.|
T Consensus 205 ~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i 284 (305)
T cd07416 205 QEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY 284 (305)
T ss_pred cccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEE
Confidence 46655 899999999999999999999999999999999999998876 899999999999999999999999
Q ss_pred cCCCceEEEEEecccc
Q 024549 228 DDTLTCSFQILKASEK 243 (266)
Q Consensus 228 ~~~~~~~~~~~~~~~~ 243 (266)
+++. +.|+++++.|.
T Consensus 285 ~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 285 ENNV-MNIRQFNCSPH 299 (305)
T ss_pred cCCc-ceEEEecCCCC
Confidence 9985 68999988764
No 12
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-64 Score=421.18 Aligned_cols=243 Identities=48% Similarity=0.960 Sum_probs=234.0
Q ss_pred EEE-ccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChHH
Q 024549 3 YDC-DVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 81 (266)
Q Consensus 3 ~Ig-DiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 81 (266)
.|+ ||||++.+|.++|+..|--|.++|||+|||||||-.|+|++.+|+.||.+||.++.+||||||.+.+.+.|||++|
T Consensus 49 TvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydE 128 (306)
T KOG0373|consen 49 TVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDE 128 (306)
T ss_pred eEeeccchhHHHHHHHHHhcCCCCCcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHH
Confidence 444 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc-hhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549 82 CKRRFN-VRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE 160 (266)
Q Consensus 82 ~~~~~~-~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 160 (266)
|+.+|+ ...|+.+.+.|+.|+++|+|+++++|||||+||++.+++||+-+.|..++|..+.++|++||||+. ++.|.-
T Consensus 129 Cq~KYGnan~wkycckVFD~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~v 207 (306)
T KOG0373|consen 129 CQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAV 207 (306)
T ss_pred HHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhhee
Confidence 999996 689999999999999999999999999999999999999999999999999999999999999985 788999
Q ss_pred CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCe-EEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEe
Q 024549 161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQ-LVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILK 239 (266)
Q Consensus 161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~-~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 239 (266)
++||+|++||++++++|..-|++++|.|+||.+.+||++.++.| ++|||||||||+..+|.|+||.++++++-++++|.
T Consensus 208 SpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~ 287 (306)
T KOG0373|consen 208 SPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFS 287 (306)
T ss_pred CCCCcceeechhhhHHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeee
Confidence 99999999999999999999999999999999999999988877 99999999999999999999999999999999999
Q ss_pred cccccCC
Q 024549 240 ASEKKGK 246 (266)
Q Consensus 240 ~~~~~~~ 246 (266)
..|..++
T Consensus 288 avpd~~~ 294 (306)
T KOG0373|consen 288 AVPDNSR 294 (306)
T ss_pred ecCCccc
Confidence 9987743
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=9.9e-63 Score=444.52 Aligned_cols=240 Identities=46% Similarity=0.878 Sum_probs=221.9
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCC--------ceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccch
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPE--------ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI 72 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~--------~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 72 (266)
+++|||||||+++|.++|+..++++. .++|||||||||||+|+|++.++++|++.+|.++++||||||.+.+
T Consensus 50 ~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l 129 (311)
T cd07419 50 IKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDI 129 (311)
T ss_pred EEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHH
Confidence 36889999999999999999988754 5799999999999999999999999999999999999999999999
Q ss_pred hhhcCChHHHHHhhch------hhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCC-CCCCcchhhh
Q 024549 73 NRIYGFYDECKRRFNV------RVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPV-DVPDQGLLCD 145 (266)
Q Consensus 73 ~~~~gf~~e~~~~~~~------~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~-~~~~~~~~~d 145 (266)
+..+||..++..+|+. .+|..+.++|+.||++++++++++|||||++|...++++++.+.||. ..+....+.|
T Consensus 130 ~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~d 209 (311)
T cd07419 130 NALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMD 209 (311)
T ss_pred HHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceee
Confidence 9999999999888864 58899999999999999999999999999999999999999999997 3455678899
Q ss_pred hhhcCCCCC--CCCCccCC---CCce--eecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCC
Q 024549 146 LLWADPDKD--IEGWGEND---RGVS--YTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEF 218 (266)
Q Consensus 146 llWsdp~~~--~~~~~~~~---rg~~--~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~ 218 (266)
++||||... ..++.+++ ||.+ +.||++++++||++||+++||||||++++||++.++++|+||||||+||+..
T Consensus 210 llWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~ 289 (311)
T cd07419 210 LLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTA 289 (311)
T ss_pred eeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCC
Confidence 999999864 34666665 8888 6999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEEcCCCceEEEEEec
Q 024549 219 DNAGAMMSVDDTLTCSFQILKA 240 (266)
Q Consensus 219 ~n~ga~l~i~~~~~~~~~~~~~ 240 (266)
+|+||++.|++++++++.+++|
T Consensus 290 ~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 290 GNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CceEEEEEECCCCcEeEEEeCC
Confidence 9999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=3.2e-60 Score=433.27 Aligned_cols=240 Identities=38% Similarity=0.699 Sum_probs=212.4
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCC-ceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
+++|||||||+.+|.++|+..++++. +++||||||||||++|+|++.++++||+.+|.++++||||||.+.++..+||.
T Consensus 68 i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~ 147 (377)
T cd07418 68 VVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFE 147 (377)
T ss_pred EEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccc
Confidence 36899999999999999999998865 46999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhch---hhHhhhhhhhccCCeEEEEcCcEEEecCCCC---------------------------CCCCCHHHHh
Q 024549 80 DECKRRFNV---RVWKTFTDCFNCLPVAALVDEKILCMHGGLS---------------------------PDLKNLDQIR 129 (266)
Q Consensus 80 ~e~~~~~~~---~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~---------------------------p~~~~l~~i~ 129 (266)
.++..+|+. .+|+.+.++|+.||++++++++++||||||+ |.+.++++|+
T Consensus 148 ~E~~~~y~~~~~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~ 227 (377)
T cd07418 148 QEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLM 227 (377)
T ss_pred hhhhhhcCchHHHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHh
Confidence 999999963 6999999999999999999999999999994 4467899999
Q ss_pred cccCCC-CCCCcc---hhhhhhhcCCCCCCCCCccC-CCCceeecChhHHHHHHHHCCCceEEeeeee------------
Q 024549 130 NIARPV-DVPDQG---LLCDLLWADPDKDIEGWGEN-DRGVSYTFGADKVVEFLQKHDLDLICRAHQV------------ 192 (266)
Q Consensus 130 ~i~r~~-~~~~~~---~~~dllWsdp~~~~~~~~~~-~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~------------ 192 (266)
.++||. +.+..+ ++.|+|||||... .++.++ .||.++.||++++++||++|++++||||||+
T Consensus 228 ~i~r~~~~~~~~~~~~i~~dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~ 306 (377)
T cd07418 228 KARRSVLDPPGEGSNLIPGDVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAG 306 (377)
T ss_pred hCCCCCCCCCCCCccccceeeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchh
Confidence 999975 444333 4789999999864 566565 7999999999999999999999999999996
Q ss_pred eccCeEEecC---CeEEEEecCCCCC------CCCCCcEEEEEEcCCC--ceEEEEEecc
Q 024549 193 VEDGYEFFAK---RQLVTVFSAPNYC------GEFDNAGAMMSVDDTL--TCSFQILKAS 241 (266)
Q Consensus 193 ~~~G~~~~~~---~~~itifSa~~y~------~~~~n~ga~l~i~~~~--~~~~~~~~~~ 241 (266)
+++||++.++ ++|+||||||||| +..+|+||++.++.+. ..+|.+++.+
T Consensus 307 v~~Gy~~~~~~~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 307 MNKGYTVDHDVESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred hhCceEEeccCCCCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 6799999876 8999999999999 5689999999996644 5666666655
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=3.1e-58 Score=405.99 Aligned_cols=236 Identities=45% Similarity=0.894 Sum_probs=219.1
Q ss_pred EEEE-ccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 2 IYDC-DVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 2 i~Ig-DiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
|.|+ ||||+|.||.++|+.-|-|..++|+|||||||||..|+|++.+|.+||+.+|..+++||||||++-+...+.|..
T Consensus 90 iTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKq 169 (517)
T KOG0375|consen 90 ITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQ 169 (517)
T ss_pred eeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHH
Confidence 3455 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCC-----
Q 024549 81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI----- 155 (266)
Q Consensus 81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~----- 155 (266)
||.-+|+.++|++..+.|..||+||+.+..++|||||++|++.++++|+++.|..+.|.-+.++|+|||||.++.
T Consensus 170 Ec~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~ 249 (517)
T KOG0375|consen 170 ECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKT 249 (517)
T ss_pred HHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997642
Q ss_pred -CCCccC-CCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCC------eEEEEecCCCCCCCCCCcEEEEEE
Q 024549 156 -EGWGEN-DRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKR------QLVTVFSAPNYCGEFDNAGAMMSV 227 (266)
Q Consensus 156 -~~~~~~-~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~ga~l~i 227 (266)
..|..| .||.++.|...|+++||+.||+--|||+||.++.||+.+... .+|||||||||.+.++|++|||..
T Consensus 250 ~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKY 329 (517)
T KOG0375|consen 250 SEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY 329 (517)
T ss_pred ccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhh
Confidence 234444 799999999999999999999999999999999999987655 489999999999999999999999
Q ss_pred cCCCceEEEEE
Q 024549 228 DDTLTCSFQIL 238 (266)
Q Consensus 228 ~~~~~~~~~~~ 238 (266)
+++.+ .+++|
T Consensus 330 EnNVM-NIRQF 339 (517)
T KOG0375|consen 330 ENNVM-NIRQF 339 (517)
T ss_pred hcccc-eeecc
Confidence 88753 44444
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-57 Score=382.90 Aligned_cols=244 Identities=51% Similarity=0.963 Sum_probs=232.9
Q ss_pred EEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChHH
Q 024549 2 IYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 81 (266)
Q Consensus 2 i~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 81 (266)
++.||+||||++|.++++.-|..++.+++|+|||||||++|.|++.+|.++|++||++|.+||||||.+.+...|||++|
T Consensus 63 tvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfyde 142 (319)
T KOG0371|consen 63 TVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDE 142 (319)
T ss_pred EEecCcchhHHHHHHHHHccCCCCCcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHH
Confidence 34559999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-chhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549 82 CKRRF-NVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE 160 (266)
Q Consensus 82 ~~~~~-~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 160 (266)
|.++| ....|+.|.+.|..+|+.+.|+++++|+|||++|.+.+++.++.+.|-.++|.++.++|+|||||+. .-+|..
T Consensus 143 clRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~ 221 (319)
T KOG0371|consen 143 CLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGI 221 (319)
T ss_pred HHhhcccccchHHhhhhhhccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCC
Confidence 99999 5689999999999999999999999999999999999999999999988999999999999999984 478999
Q ss_pred CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEec
Q 024549 161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 240 (266)
Q Consensus 161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 240 (266)
++||.++.||++..++|-.+||++++-|+||-+++||.......++|+|||||||+..+|.+|++.+++.....|.+++|
T Consensus 222 sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~p 301 (319)
T KOG0371|consen 222 SPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDP 301 (319)
T ss_pred CCCCCCcccchhhHHHhhccCCchHhHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC
Q 024549 241 SEKKGK 246 (266)
Q Consensus 241 ~~~~~~ 246 (266)
+|...+
T Consensus 302 sp~k~e 307 (319)
T KOG0371|consen 302 SPRKVE 307 (319)
T ss_pred Cccccc
Confidence 875543
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-51 Score=366.13 Aligned_cols=248 Identities=34% Similarity=0.642 Sum_probs=221.1
Q ss_pred EEEE-ccCCCHHHHHHHHHhcCCCCCce-EEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 2 IYDC-DVHGQFSDLLRLFEYGGYPPEAN-YLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 2 i~Ig-DiHG~~~~l~~~l~~~~~~~~~~-~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
|.|+ |+||.+++|.-+|-+.|+|..++ |||.||+||||.+|+|||..|+++-+.+|..+++-|||||+.++|..|||.
T Consensus 167 VTiCGDLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~ 246 (631)
T KOG0377|consen 167 VTICGDLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFI 246 (631)
T ss_pred eEEeccccccccceEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHH
Confidence 4566 99999999999999999997764 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh---chhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCC---------CCC----------
Q 024549 80 DECKRRF---NVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARP---------VDV---------- 137 (266)
Q Consensus 80 ~e~~~~~---~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~---------~~~---------- 137 (266)
.|+..+| +.++...+.++|++||++.+++++++.||||++. .++++-+.++.|- .+.
T Consensus 247 kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~ 325 (631)
T KOG0377|consen 247 KEVESKYKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKA 325 (631)
T ss_pred HHHHHHhhhcccHHHHHHHHHHHhcchhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhh
Confidence 9999999 5688899999999999999999999999999985 4577777666542 211
Q ss_pred ---CCcchhhhhhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCC
Q 024549 138 ---PDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNY 214 (266)
Q Consensus 138 ---~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y 214 (266)
.+...+.|+|||||......|.+.-||.|++||++.+..||++.+++++||+||+.++||++.++++|+|||||+||
T Consensus 326 vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNY 405 (631)
T KOG0377|consen 326 VGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNY 405 (631)
T ss_pred cChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccch
Confidence 12467789999999977666666689999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEEEcCCCceEEEEEecccccCCcCCC
Q 024549 215 CGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFG 250 (266)
Q Consensus 215 ~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~~~~ 250 (266)
-...+|+||.+.+.+.+...|.++..+....+.++.
T Consensus 406 Ye~GSNrGAYikl~~~~~PhfvQY~a~k~t~~~tlr 441 (631)
T KOG0377|consen 406 YEIGSNRGAYIKLGNQLTPHFVQYQAAKQTKRLTLR 441 (631)
T ss_pred heecCCCceEEEeCCCCCchHHHHHhhhhhhhhhHH
Confidence 888899999999999999888877777666666653
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.4e-45 Score=338.39 Aligned_cols=240 Identities=46% Similarity=0.852 Sum_probs=225.7
Q ss_pred EEEccCCCHHHHHHHHHhcCCCCCc-eEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChHH
Q 024549 3 YDCDVHGQFSDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 81 (266)
Q Consensus 3 ~IgDiHG~~~~l~~~l~~~~~~~~~-~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 81 (266)
+.||+||++.++.++++..+.|+.. .++|-||++|||..|.|+...+++.|+.+|+++|++|||||...++..|||..+
T Consensus 218 v~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e 297 (476)
T KOG0376|consen 218 VCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGE 297 (476)
T ss_pred ecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcc
Confidence 4459999999999999999988764 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCC-CCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549 82 CKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSP-DLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE 160 (266)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p-~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 160 (266)
+..+|..+.+..+.+.|..||++..++++++.+|||+.. .-..++++++|.|+...++.+.++++|||||... .+..+
T Consensus 298 ~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~ 376 (476)
T KOG0376|consen 298 VKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSP 376 (476)
T ss_pred hhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccc-cCCCc
Confidence 999999999999999999999999999999999999864 4568999999999988888999999999999865 88899
Q ss_pred CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEc-CCCceEEEEEe
Q 024549 161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVD-DTLTCSFQILK 239 (266)
Q Consensus 161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~ 239 (266)
+.||.+..||++++++||+.|++++|||||+..+.||+..++|+|+|||||||||+..+|.||++.++ +++...+..++
T Consensus 377 S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e 456 (476)
T KOG0376|consen 377 SKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFE 456 (476)
T ss_pred cccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 77888899998
Q ss_pred cccc
Q 024549 240 ASEK 243 (266)
Q Consensus 240 ~~~~ 243 (266)
|.|.
T Consensus 457 ~vp~ 460 (476)
T KOG0376|consen 457 AVPH 460 (476)
T ss_pred cCCC
Confidence 8764
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.4e-37 Score=268.29 Aligned_cols=214 Identities=48% Similarity=0.814 Sum_probs=175.0
Q ss_pred EEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChHH
Q 024549 2 IYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 81 (266)
Q Consensus 2 i~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 81 (266)
++||||||++++|.++|+.++..+.+.+||||||||||+.+.+++.+++.++.. |.++++|+||||.+.+....++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 479999999999999999999988999999999999999999999999998877 8899999999999988765554433
Q ss_pred H---------HHhhchhhHhhhhhhhccCCeEEEEcC-cEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCC
Q 024549 82 C---------KRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADP 151 (266)
Q Consensus 82 ~---------~~~~~~~~~~~~~~~~~~LPl~~~i~~-~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp 151 (266)
. .......++..+.+++..||++..++. +++|||||++|.....++.. ..+......+++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345677888899999999998887 99999999999875554443 2234456689999999
Q ss_pred CCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEE
Q 024549 152 DKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMS 226 (266)
Q Consensus 152 ~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~ 226 (266)
.........+.++. |+++++.|++.++.+.|||||+++..|+.....++++||+|++.|++..+|..+.+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 75433333334443 999999999999999999999999999876678899999999999876667766553
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.96 E-value=2.7e-28 Score=208.94 Aligned_cols=176 Identities=21% Similarity=0.311 Sum_probs=130.1
Q ss_pred EEEEccCCCHHHHHHHHHhcCC--------CCCceEEEeCCcccCCCCcHHHHHHHHHhhhh---cCCcEEEEcCCcccc
Q 024549 2 IYDCDVHGQFSDLLRLFEYGGY--------PPEANYLFLGDYVDRGKQSIETICLLLAYKVK---YKENFFLLRGNHECA 70 (266)
Q Consensus 2 i~IgDiHG~~~~l~~~l~~~~~--------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~---~p~~v~~lrGNHE~~ 70 (266)
++|||||||+++|.++|+.+++ .+.+.+||+||+|||||++.++++++++|+.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35688999999999999999999999998754 456899999999999
Q ss_pred chhhhcCCh--HHHHHhhc-----hh---hHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCc
Q 024549 71 SINRIYGFY--DECKRRFN-----VR---VWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQ 140 (266)
Q Consensus 71 ~~~~~~gf~--~e~~~~~~-----~~---~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~ 140 (266)
.+...+.+. ........ .. ....+.+|++.+|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 887443322 11111000 11 1234578999999998776 79999999944
Q ss_pred chhhhhhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCC
Q 024549 141 GLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAP 212 (266)
Q Consensus 141 ~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~ 212 (266)
+|++.-.. ..... .-+...++++++.++.++||+|||+++.|....+++++++|.+..
T Consensus 140 ------~w~r~y~~-----~~~~~---~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSK-----ETSDK---ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhh-----hhhhc---cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 23222100 00000 011246888999999999999999999887668899999999854
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=3.8e-27 Score=206.67 Aligned_cols=120 Identities=22% Similarity=0.383 Sum_probs=94.6
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC---------CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP---------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECAS 71 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~---------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 71 (266)
+.+|||||||++.|.++|+++++. ..+++|||||||||||+|.+|+.+++++. .+.++++|+||||.++
T Consensus 3 ~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~~ 80 (245)
T PRK13625 3 YDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNKL 80 (245)
T ss_pred eEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHHH
Confidence 368999999999999999998874 46789999999999999999999998874 4568999999999987
Q ss_pred hhhhcC-------ChHHHHHhhc-------hhhHhhhhhhhccCCeEEEEc-CcEEEecCCCCCCC
Q 024549 72 INRIYG-------FYDECKRRFN-------VRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDL 122 (266)
Q Consensus 72 ~~~~~g-------f~~e~~~~~~-------~~~~~~~~~~~~~LPl~~~i~-~~~l~vHgGi~p~~ 122 (266)
++...+ ...+....|. ..+.+.+.+|++++|++..++ ++++|||||+.|..
T Consensus 81 l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 81 YRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 753221 0112222221 235677889999999987764 57999999998853
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.94 E-value=2.2e-26 Score=199.07 Aligned_cols=116 Identities=24% Similarity=0.388 Sum_probs=91.4
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC--------CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccch
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP--------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI 72 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 72 (266)
.++|||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++|+++.. +.++++|+||||.+++
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll 78 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAI 78 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHH
Confidence 368999999999999999998775 467899999999999999999999998853 4589999999999887
Q ss_pred hhhcC------Ch-----------HHHHHhhc--hhhHhhhhhhhccCCeEEEEcCcEEEecCCCC
Q 024549 73 NRIYG------FY-----------DECKRRFN--VRVWKTFTDCFNCLPVAALVDEKILCMHGGLS 119 (266)
Q Consensus 73 ~~~~g------f~-----------~e~~~~~~--~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~ 119 (266)
....+ +. .+..+.+. .+..+.+.+||++||++... ++++|||||+.
T Consensus 79 ~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 79 AWHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred HhhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 52211 00 11222221 34567789999999999765 58999999986
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.94 E-value=6.9e-26 Score=201.21 Aligned_cols=215 Identities=17% Similarity=0.319 Sum_probs=140.1
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC-CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
+++|||||||+++|.++|+++++. ..+.++||||+|||||+|.+|+.++.++ +.++++|+||||.+++...++..
T Consensus 3 ~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g~~ 78 (275)
T PRK00166 3 TYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAGIK 78 (275)
T ss_pred EEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcCCc
Confidence 478999999999999999999874 5688999999999999999999999876 45799999999998877555543
Q ss_pred -----HHHHHhhchhhHhhhhhhhccCCeEEEE-cCcEEEecCCCCCCCCCHHHHhcccCC----CCCCC-cchhhhhhh
Q 024549 80 -----DECKRRFNVRVWKTFTDCFNCLPVAALV-DEKILCMHGGLSPDLKNLDQIRNIARP----VDVPD-QGLLCDLLW 148 (266)
Q Consensus 80 -----~e~~~~~~~~~~~~~~~~~~~LPl~~~i-~~~~l~vHgGi~p~~~~l~~i~~i~r~----~~~~~-~~~~~dllW 148 (266)
+.+.........+.+.+|++++|+...+ ..++++||||++|.+ ++++.....+. +..+. ...+..+.|
T Consensus 79 ~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~-~~~~~~~~a~eve~~l~~~~~~~~~~~my~ 157 (275)
T PRK00166 79 RNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW-DLATALALAREVEAVLRSDDYRDFLANMYG 157 (275)
T ss_pred cccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC-CHHHHHHHHHHHHHHhcCCcHHHHHHHhcC
Confidence 1111212234456788999999998765 568999999999987 44442222211 11111 235556666
Q ss_pred cCCCCCCCCCccCCCCc-eeecChhHHH--HHHHH-----------------------------CCCceEEeeeeeeccC
Q 024549 149 ADPDKDIEGWGENDRGV-SYTFGADKVV--EFLQK-----------------------------HDLDLICRAHQVVEDG 196 (266)
Q Consensus 149 sdp~~~~~~~~~~~rg~-~~~fG~~~~~--~fl~~-----------------------------~~~~~iIrgH~~~~~G 196 (266)
+.|.. |.++-.|. ...|.-.++. +||.. ..-..||-||.+...|
T Consensus 158 ~~p~~----W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 158 NEPDR----WSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCcCc----cCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 66632 22222221 0111111110 01111 1244799999998778
Q ss_pred eEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCC
Q 024549 197 YEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDT 230 (266)
Q Consensus 197 ~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~ 230 (266)
... ...++.+-+..-+. ++=..+.+++.
T Consensus 234 ~~~--~~~~~~LDtGcvwg----g~Lta~~l~~~ 261 (275)
T PRK00166 234 LTT--PPNIIALDTGCVWG----GKLTALRLEDK 261 (275)
T ss_pred ccC--CCCeEEeecccccC----CeEEEEEeCCC
Confidence 765 56688888876553 33345666644
No 24
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.94 E-value=4e-26 Score=200.80 Aligned_cols=147 Identities=24% Similarity=0.406 Sum_probs=110.4
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC-CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
+++|||||||+++|+++|+++++. +.+.++|+||||||||+|+||+.++++++ .++++|+||||.+++...++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 479999999999999999999986 57899999999999999999999998875 4899999999999887655542
Q ss_pred -----HHHHHhhchhhHhhhhhhhccCCeEEEEcC-cEEEecCCCCCCCCCHHHHhcccCCCC----CCC-cchhhhhhh
Q 024549 80 -----DECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARPVD----VPD-QGLLCDLLW 148 (266)
Q Consensus 80 -----~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~-~~l~vHgGi~p~~~~l~~i~~i~r~~~----~~~-~~~~~dllW 148 (266)
+...........+.+.+|++++|++..+++ ++++||||++|.+ ++++.....+.++ .++ ...+..+.|
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w-~~~~~~~~a~eve~~l~~~~~~~~~~~my~ 155 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW-SIEQALKLAREVEAALRGPNYREFLKNMYG 155 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC-CHHHHHHHHHHHHHHhcCCcHHHHHHHhhC
Confidence 111122233445678899999999987764 7999999999988 5555443333221 122 234455555
Q ss_pred cCCC
Q 024549 149 ADPD 152 (266)
Q Consensus 149 sdp~ 152 (266)
+.|.
T Consensus 156 ~~p~ 159 (257)
T cd07422 156 NEPD 159 (257)
T ss_pred CCCc
Confidence 5663
No 25
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.93 E-value=9.1e-25 Score=190.33 Aligned_cols=118 Identities=25% Similarity=0.440 Sum_probs=93.8
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCC----------CceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPP----------EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~----------~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
|.+|||||||+.+|+++|+++++.+ .+++|||||||||||+|.||+++|++++. +.++++|+||||.+
T Consensus 3 i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE~~ 80 (234)
T cd07423 3 FDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHDNK 80 (234)
T ss_pred eEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcHHH
Confidence 4688999999999999999997753 46899999999999999999999988864 45799999999998
Q ss_pred chhhhc--------CChHHHHHhh---chhhHhhhhhhhccCCeEEEEc-CcEEEecCCCCCC
Q 024549 71 SINRIY--------GFYDECKRRF---NVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPD 121 (266)
Q Consensus 71 ~~~~~~--------gf~~e~~~~~---~~~~~~~~~~~~~~LPl~~~i~-~~~l~vHgGi~p~ 121 (266)
+++... ++. +....+ ..++.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 81 l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 81 LYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 776322 222 112222 2356678889999999987765 4799999998864
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.92 E-value=2.1e-25 Score=196.91 Aligned_cols=126 Identities=20% Similarity=0.341 Sum_probs=102.6
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC-CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
+++|||||||+++|.++|+++++. ..++++|+||+|||||+|+||+.++.++ +.++++|+||||.++++..+|+.
T Consensus 3 ~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l----~~~~~~VlGNHD~~lL~~~~g~~ 78 (279)
T TIGR00668 3 TYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSL----GDAVRLVLGNHDLHLLAVFAGIS 78 (279)
T ss_pred EEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhc----CCCeEEEEChhHHHHHHHhcCCC
Confidence 378999999999999999999976 5688999999999999999999999877 34688999999999888666652
Q ss_pred -----HHHHHhhchhhHhhhhhhhccCCeEEEEc-CcEEEecCCCCCCCCCHHHHhcc
Q 024549 80 -----DECKRRFNVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDLKNLDQIRNI 131 (266)
Q Consensus 80 -----~e~~~~~~~~~~~~~~~~~~~LPl~~~i~-~~~l~vHgGi~p~~~~l~~i~~i 131 (266)
+.....+...+.+.+.+|++++|+..... .++++||||++|.+ ++++....
T Consensus 79 ~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w-~l~~a~~~ 135 (279)
T TIGR00668 79 RNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW-DLQTAKEC 135 (279)
T ss_pred ccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC-cHHHHHHH
Confidence 23333344566788899999999986554 36999999999998 56655443
No 27
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.92 E-value=3.2e-24 Score=189.75 Aligned_cols=187 Identities=19% Similarity=0.243 Sum_probs=123.8
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC------CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCC-cEEEEcCCccccchh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKE-NFFLLRGNHECASIN 73 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~-~v~~lrGNHE~~~~~ 73 (266)
+++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.+++.
T Consensus 4 iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l~ 83 (304)
T cd07421 4 VICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFAA 83 (304)
T ss_pred EEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHHh
Confidence 478999999999999999875421 2457999999999999999999999999888775 689999999987654
Q ss_pred hhcC---------Ch------------------------------------------------------HHHHHhhc---
Q 024549 74 RIYG---------FY------------------------------------------------------DECKRRFN--- 87 (266)
Q Consensus 74 ~~~g---------f~------------------------------------------------------~e~~~~~~--- 87 (266)
-... |. .+....|+
T Consensus 84 fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~~ 163 (304)
T cd07421 84 FLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVPH 163 (304)
T ss_pred HhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCCc
Confidence 1110 00 11122232
Q ss_pred ------hhhHhhhhhhhccCCeEEEEcCcE-------------EEecCCCCCCCCCHHHHhccc-CCCCCCCcchhhhhh
Q 024549 88 ------VRVWKTFTDCFNCLPVAALVDEKI-------------LCMHGGLSPDLKNLDQIRNIA-RPVDVPDQGLLCDLL 147 (266)
Q Consensus 88 ------~~~~~~~~~~~~~LPl~~~i~~~~-------------l~vHgGi~p~~~~l~~i~~i~-r~~~~~~~~~~~dll 147 (266)
..+-+...+|++.||+....+ .+ +|||||+.|...--+|.+.+. +....+ -.+++
T Consensus 164 ~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~~l 238 (304)
T cd07421 164 GSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIAPL 238 (304)
T ss_pred chHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----ccccc
Confidence 123345679999999986544 45 999999999986555655433 111222 23888
Q ss_pred hcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCC
Q 024549 148 WADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCG 216 (266)
Q Consensus 148 Wsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~ 216 (266)
|.+... -..++.. . ..-.+||.||+. +....+.-|.|-+...|.+
T Consensus 239 ~~R~~f-----~~~~~~~----~----------~~~~~VVhGHt~-----~~~~~~~Ri~iDtGa~~~~ 283 (304)
T cd07421 239 SGRKNV-----WNIPQEL----A----------DKKTIVVSGHHG-----KLHIDGLRLIIDEGGGFDD 283 (304)
T ss_pred ccchhh-----hcCcccc----c----------CCCeEEEECCCC-----CceecCCEEEEECCCCcCC
Confidence 888752 1111110 0 012569999992 2333444567777776654
No 28
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.92 E-value=1.2e-24 Score=187.65 Aligned_cols=175 Identities=21% Similarity=0.258 Sum_probs=114.2
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC-CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
+++|||||||+++|+++|+.+++. ..++++||||+|||||+|.+||+++.+ .++++|+||||.++++...+-.
T Consensus 19 i~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~~~ 92 (218)
T PRK11439 19 IWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALASQQ 92 (218)
T ss_pred EEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHCCc
Confidence 468999999999999999999886 578899999999999999999999854 2678999999998876321110
Q ss_pred H--------HHHHhhc---hhhHhhhhhhhccCCeEEEEc---CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhh
Q 024549 80 D--------ECKRRFN---VRVWKTFTDCFNCLPVAALVD---EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCD 145 (266)
Q Consensus 80 ~--------e~~~~~~---~~~~~~~~~~~~~LPl~~~i~---~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~d 145 (266)
. +....+. .+.+..+.+|+++||+...+. +++++||||++... . +. ..+. ...+
T Consensus 93 ~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~-~-~~----~~~~------~~~~ 160 (218)
T PRK11439 93 MSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV-Y-EW----QKDV------DLHQ 160 (218)
T ss_pred cchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc-h-hh----hccC------Cccc
Confidence 0 0001111 134456678999999986553 46999999984321 1 10 0110 1245
Q ss_pred hhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCC
Q 024549 146 LLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNY 214 (266)
Q Consensus 146 llWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y 214 (266)
++|+++... ..+. .+ ...+.+.+|.|||+++.-.. .+..+.|-+.+-|
T Consensus 161 ~~w~r~~~~-~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~ 208 (218)
T PRK11439 161 VLWSRSRLG-ERQK--GQ---------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVF 208 (218)
T ss_pred eEEcChhhh-hccc--cc---------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCC
Confidence 788766411 0000 00 11245679999999864322 2345666665544
No 29
>PHA02239 putative protein phosphatase
Probab=99.92 E-value=3.2e-24 Score=186.76 Aligned_cols=172 Identities=20% Similarity=0.298 Sum_probs=118.2
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC--CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcC-
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG- 77 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g- 77 (266)
+++|||||||++.|.++++.+... +.+.+||+|||||||++|.+++..++.+.. .+.++++|+||||.++++...+
T Consensus 3 ~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~~~ 81 (235)
T PHA02239 3 IYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIMENV 81 (235)
T ss_pred EEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHhCc
Confidence 478999999999999999987543 468899999999999999999999988753 4568999999999986642110
Q ss_pred ----Ch---------HHHHHhhc-------------------------------hhhHhhhhhhhccCCeEEEEcCcEEE
Q 024549 78 ----FY---------DECKRRFN-------------------------------VRVWKTFTDCFNCLPVAALVDEKILC 113 (266)
Q Consensus 78 ----f~---------~e~~~~~~-------------------------------~~~~~~~~~~~~~LPl~~~i~~~~l~ 113 (266)
.. .+....|+ ...+..+.+|++.||+.... ++++|
T Consensus 82 ~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~if 160 (235)
T PHA02239 82 DRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKYIF 160 (235)
T ss_pred hhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCEEE
Confidence 00 11112221 01234556689999999664 58999
Q ss_pred ecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeee
Q 024549 114 MHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVV 193 (266)
Q Consensus 114 vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~ 193 (266)
||||+.|... +++ +...+++|.+. . .+.. .-+.||.|||++
T Consensus 161 VHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHTp~ 201 (235)
T PHA02239 161 SHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHTPT 201 (235)
T ss_pred EeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCCC-------------------CCcEEEECCCCC
Confidence 9999998642 222 12368999986 2 1111 113589999998
Q ss_pred ccCeEEecCCeEEEEecCCCC
Q 024549 194 EDGYEFFAKRQLVTVFSAPNY 214 (266)
Q Consensus 194 ~~G~~~~~~~~~itifSa~~y 214 (266)
.++.... .++.|.|.+..-|
T Consensus 202 ~~~~~~~-~~~~I~IDtGa~~ 221 (235)
T PHA02239 202 DSGEVEI-NGDMLMCDVGAVF 221 (235)
T ss_pred CCCcccc-cCCEEEeecCccc
Confidence 7654333 2345677665433
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.89 E-value=4.1e-23 Score=176.69 Aligned_cols=166 Identities=22% Similarity=0.280 Sum_probs=112.3
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC-CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCC-
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGF- 78 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf- 78 (266)
|++|||||||+.+|+++++.+++. ..+.++|+||+|||||++.+++.++.. .++++|+||||.+.+....+.
T Consensus 3 i~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~~~ 76 (207)
T cd07424 3 DFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRAEP 76 (207)
T ss_pred EEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhCCC
Confidence 478899999999999999998874 468899999999999999999998853 368999999999887754331
Q ss_pred -hHHHHHhh---------chhhHhhhhhhhccCCeEEEEc---CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhh
Q 024549 79 -YDECKRRF---------NVRVWKTFTDCFNCLPVAALVD---EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCD 145 (266)
Q Consensus 79 -~~e~~~~~---------~~~~~~~~~~~~~~LPl~~~i~---~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~d 145 (266)
..+..... ..++++.+.+||+.||+...++ .++++||||+++.. ..+.... +........+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~-~~~~~~~-----~~~~~~~~~~ 150 (207)
T cd07424 77 LDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDD-WSDGVGA-----VTLRPEDIEE 150 (207)
T ss_pred cchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcch-hhhhhhc-----cccCccccee
Confidence 11111111 1124556788999999998764 36999999986543 1111110 1112233467
Q ss_pred hhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCe
Q 024549 146 LLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGY 197 (266)
Q Consensus 146 llWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~ 197 (266)
++|+++....... ...-+.+.||.||++.+.-+
T Consensus 151 ~~w~~~~~~~~~~-------------------~~~~~~~~iV~GHTh~~~~~ 183 (207)
T cd07424 151 LLWSRTRIQKAQT-------------------QPIKGVDAVVHGHTPVKRPL 183 (207)
T ss_pred eeeccchhhhcCc-------------------cccCCCCEEEECCCCCCcce
Confidence 8898764210000 00114567999999987543
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.88 E-value=3.1e-22 Score=172.68 Aligned_cols=113 Identities=20% Similarity=0.264 Sum_probs=83.1
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC-CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
|++|||||||+++|+++|+.+.+. ..+.++||||+|||||+|.+++.++.+ .++++|+||||.+++.....-.
T Consensus 17 i~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~~~ 90 (218)
T PRK09968 17 IWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFETGD 90 (218)
T ss_pred EEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhcCC
Confidence 468899999999999999998754 568899999999999999999998852 3688999999998875321100
Q ss_pred -H-------HHHHhhch---hhHhhhhhhhccCCeEEEEc---CcEEEecCCCC
Q 024549 80 -D-------ECKRRFNV---RVWKTFTDCFNCLPVAALVD---EKILCMHGGLS 119 (266)
Q Consensus 80 -~-------e~~~~~~~---~~~~~~~~~~~~LPl~~~i~---~~~l~vHgGi~ 119 (266)
. +....... ........|+++||+...+. .++++||||++
T Consensus 91 ~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 91 GNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred hhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 0 00011111 12233456899999987653 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.46 E-value=7.8e-13 Score=105.54 Aligned_cols=157 Identities=24% Similarity=0.289 Sum_probs=98.7
Q ss_pred CEEEEccCCCHHHH----HHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHH--HHhhhhcCCcEEEEcCCccccchhh
Q 024549 1 MIYDCDVHGQFSDL----LRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLL--LAYKVKYKENFFLLRGNHECASINR 74 (266)
Q Consensus 1 ii~IgDiHG~~~~l----~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l--~~lk~~~p~~v~~lrGNHE~~~~~~ 74 (266)
|++|+|+|+..... ..+.+.....+.+.+|++||++|++..+.+..... .......+..+++++||||......
T Consensus 3 i~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~~ 82 (200)
T PF00149_consen 3 ILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGNS 82 (200)
T ss_dssp EEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHHH
T ss_pred EEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceecc
Confidence 46888999999987 44444444466788999999999999988876654 4455557789999999999987543
Q ss_pred hcCChHHHHH----------------------------------hhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCC
Q 024549 75 IYGFYDECKR----------------------------------RFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSP 120 (266)
Q Consensus 75 ~~gf~~e~~~----------------------------------~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p 120 (266)
.+........ ............+.............++++|.++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~ 162 (200)
T PF00149_consen 83 FYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYS 162 (200)
T ss_dssp HHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSST
T ss_pred ccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCCC
Confidence 2211111110 000011111222222222333345579999998876
Q ss_pred CCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeee
Q 024549 121 DLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVV 193 (266)
Q Consensus 121 ~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~ 193 (266)
........ .....+...+..++++.++++++.||+..
T Consensus 163 ~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 163 SSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp TSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred cccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 43211111 12246677899999999999999999864
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.39 E-value=1.9e-11 Score=99.38 Aligned_cols=82 Identities=26% Similarity=0.333 Sum_probs=61.5
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
+++|+|+||+...+.++++.+.. .+.++++||++++++.+. + .....+++++||||....
T Consensus 2 i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~-------- 61 (155)
T cd00841 2 IGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD-------- 61 (155)
T ss_pred EEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC--------
Confidence 46788999999999999998654 688999999999998765 1 124469999999998532
Q ss_pred HHHHhhchhhHhhhhhhhccCCeEEEEc---CcEEEecCCCC
Q 024549 81 ECKRRFNVRVWKTFTDCFNCLPVAALVD---EKILCMHGGLS 119 (266)
Q Consensus 81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~---~~~l~vHgGi~ 119 (266)
++.+|....+. .+++++||...
T Consensus 62 -----------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 -----------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred -----------------cccCCceEEEEECCEEEEEECCccc
Confidence 34455443332 36999999654
No 34
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.26 E-value=1.5e-10 Score=94.59 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=47.0
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC-CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
|++|+|+||++.++..+++..... ..+.++++||++ +.+++..+..+ ...++.++||||..
T Consensus 3 i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~----~~~~~~V~GN~D~~ 64 (158)
T TIGR00040 3 ILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDL----AAKVIAVRGNNDGE 64 (158)
T ss_pred EEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHh----CCceEEEccCCCch
Confidence 467889999998887777766554 678899999999 46777666543 23599999999984
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.25 E-value=1.4e-10 Score=93.60 Aligned_cols=150 Identities=20% Similarity=0.280 Sum_probs=88.3
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
|+++||+|++..++.++++.+ ...+.++++||++| ..++++.+... .++.++||||..........
T Consensus 3 i~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~----~~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~-- 68 (156)
T PF12850_consen 3 IAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFD----PEEVLELLRDI------PVYVVRGNHDNWAFPNENDE-- 68 (156)
T ss_dssp EEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCS----HHHHHHHHHHH------EEEEE--CCHSTHHHSEECT--
T ss_pred EEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchh----HHHHHHHHhcC------CEEEEeCCcccccchhhhhc--
Confidence 467889999999999999988 44678899999999 36666666433 69999999996543321100
Q ss_pred HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549 81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE 160 (266)
Q Consensus 81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 160 (266)
+. +...... .....+++++||.....
T Consensus 69 --------~~------~~~~~~~-~~~~~~i~~~H~~~~~~--------------------------------------- 94 (156)
T PF12850_consen 69 --------EY------LLDALRL-TIDGFKILLSHGHPYDV--------------------------------------- 94 (156)
T ss_dssp --------CS------SHSEEEE-EETTEEEEEESSTSSSS---------------------------------------
T ss_pred --------cc------cccceee-eecCCeEEEECCCCccc---------------------------------------
Confidence 00 1122111 12244799999955430
Q ss_pred CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEc
Q 024549 161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVD 228 (266)
Q Consensus 161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~ 228 (266)
..+.+.+.+.+...++++++.||...+.-.+ ..+..+++.-|..... .+...+++.++
T Consensus 95 -------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~--~~~~~~~~i~~ 152 (156)
T PF12850_consen 95 -------QWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPR--HGDQSGYAILD 152 (156)
T ss_dssp -------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-S--SSSSEEEEEEE
T ss_pred -------ccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCC--CCCCCEEEEEE
Confidence 1334456677778999999999998754333 3344455554443222 12245555443
No 36
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.23 E-value=5.2e-10 Score=96.78 Aligned_cols=69 Identities=10% Similarity=0.209 Sum_probs=56.0
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
|++|+|+||++..++++++.+.....+.+|++||++++|+..-++..++..+.. .+..+++++||||..
T Consensus 7 Il~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 7 VLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred EEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 468899999999999999976555678899999999999777676666655542 345799999999985
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.19 E-value=1.4e-10 Score=92.34 Aligned_cols=117 Identities=21% Similarity=0.264 Sum_probs=78.6
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcH--HHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCC
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI--ETICLLLAYKVKYKENFFLLRGNHECASINRIYGF 78 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf 78 (266)
|++|+|+||++. .......+.++++||+++++..+. +++.++..++ ...+++++||||....
T Consensus 2 i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~---~~~~~~v~GNHD~~~~------ 65 (135)
T cd07379 2 FVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP---HPHKIVIAGNHDLTLD------ 65 (135)
T ss_pred EEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC---CCeEEEEECCCCCcCC------
Confidence 468899999987 123355688999999999986532 2344443332 1236789999996421
Q ss_pred hHHHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCC
Q 024549 79 YDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGW 158 (266)
Q Consensus 79 ~~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 158 (266)
.-+.+++++|+.+.+.. +..+.
T Consensus 66 ---------------------------~~~~~ilv~H~~p~~~~----------------------~~~~~--------- 87 (135)
T cd07379 66 ---------------------------PEDTDILVTHGPPYGHL----------------------DLVSS--------- 87 (135)
T ss_pred ---------------------------CCCCEEEEECCCCCcCc----------------------ccccc---------
Confidence 12447899999542211 00000
Q ss_pred ccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeE
Q 024549 159 GENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYE 198 (266)
Q Consensus 159 ~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 198 (266)
....|.+.+.+++++.+.++++.||+..+.|++
T Consensus 88 -------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 -------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred -------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 113677888999999999999999999988876
No 38
>PRK09453 phosphodiesterase; Provisional
Probab=99.15 E-value=1.7e-10 Score=96.60 Aligned_cols=67 Identities=22% Similarity=0.382 Sum_probs=53.2
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCC--------cHHHHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQ--------SIETICLLLAYKVKYKENFFLLRGNHECAS 71 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 71 (266)
+.+|+|+||++.++.++++.+...+.+.++++||++|+|++ +.+++..+..+ ..++++++||||...
T Consensus 3 i~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~~ 77 (182)
T PRK09453 3 LMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSEV 77 (182)
T ss_pred EEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcchh
Confidence 36788999999999999998765667899999999999874 45566655432 347999999999753
No 39
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.04 E-value=2.3e-09 Score=89.08 Aligned_cols=66 Identities=21% Similarity=0.258 Sum_probs=47.5
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCc-HHHHHHHHHhhhhcCCcEEEEcCCccccch
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS-IETICLLLAYKVKYKENFFLLRGNHECASI 72 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s-~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 72 (266)
|++++|+||++..+.. ..+...+.+.+|+.||++++|... .+.+..+. ..+..++.++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHHH
Confidence 5789999999998877 333334568899999999999763 33333332 235579999999997543
No 40
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.03 E-value=2.4e-09 Score=93.16 Aligned_cols=155 Identities=17% Similarity=0.200 Sum_probs=92.3
Q ss_pred CEEEEccCCCHHHHH-HHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhh----
Q 024549 1 MIYDCDVHGQFSDLL-RLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRI---- 75 (266)
Q Consensus 1 ii~IgDiHG~~~~l~-~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~---- 75 (266)
|++||||||++.... +.++. ...|.++++||+++. +.+++..+..+ +..++.++||||.+.....
T Consensus 3 Ia~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k~ 72 (238)
T cd07397 3 IAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYDATFRKKG 72 (238)
T ss_pred EEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCcccccccccchH
Confidence 468889999988642 33433 235789999999864 56766666544 4568999999998553200
Q ss_pred ----------------cC-------------------------ChHHHHHhhc-hhhHhhhhhhhccCCeEEEEcCcEEE
Q 024549 76 ----------------YG-------------------------FYDECKRRFN-VRVWKTFTDCFNCLPVAALVDEKILC 113 (266)
Q Consensus 76 ----------------~g-------------------------f~~e~~~~~~-~~~~~~~~~~~~~LPl~~~i~~~~l~ 113 (266)
++ ...++...|+ ....+++...++.++.+......+++
T Consensus 73 ~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vli 152 (238)
T cd07397 73 DRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILL 152 (238)
T ss_pred HHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEE
Confidence 00 0124555553 23445566667777533333447999
Q ss_pred ecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCC----CceEEee
Q 024549 114 MHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHD----LDLICRA 189 (266)
Q Consensus 114 vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~----~~~iIrg 189 (266)
.|+++.-.. ++.+.+ +-- .|.+. +.-+|...+.+.+++.. .++++-|
T Consensus 153 aH~~~~G~g---~~~~~~------------cg~----------d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~fG 203 (238)
T cd07397 153 AHNGPSGLG---SDAEDP------------CGR----------DWKPP----GGDWGDPDLALAISQIQQGRQVPLVVFG 203 (238)
T ss_pred eCcCCcCCC---cccccc------------ccc----------ccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEeC
Confidence 999986532 111111 111 12111 12367777777666654 7999999
Q ss_pred eeeec
Q 024549 190 HQVVE 194 (266)
Q Consensus 190 H~~~~ 194 (266)
|-...
T Consensus 204 H~H~~ 208 (238)
T cd07397 204 HMHHR 208 (238)
T ss_pred CccCc
Confidence 98754
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.98 E-value=4.4e-08 Score=81.95 Aligned_cols=58 Identities=17% Similarity=0.222 Sum_probs=41.3
Q ss_pred CEEEEccC-CCHH-----HHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 1 MIYDCDVH-GQFS-----DLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 1 ii~IgDiH-G~~~-----~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
|.+|||.| |.-. .+.++++. ...+.++.+||+++ .+++.++..+ ..+++.++||||..
T Consensus 2 i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~----~~~~~~V~GN~D~~ 65 (178)
T cd07394 2 VLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTI----APDVHIVRGDFDEN 65 (178)
T ss_pred EEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhh----CCceEEEECCCCcc
Confidence 46888999 6543 35555543 44678999999986 6777766544 22689999999974
No 42
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.93 E-value=9.6e-09 Score=79.10 Aligned_cols=117 Identities=26% Similarity=0.396 Sum_probs=83.3
Q ss_pred EEEEccCCCHHHHHHHH--HhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 2 IYDCDVHGQFSDLLRLF--EYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 2 i~IgDiHG~~~~l~~~l--~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
+++||+|+......... +.......+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 46899999999888765 33344556788999999999988777654422333345678999999999
Q ss_pred HHHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCc
Q 024549 80 DECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG 159 (266)
Q Consensus 80 ~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~ 159 (266)
++++|..+.+....... ..
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~~---------------------~~--------- 88 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELSP---------------------DE--------- 88 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhcc---------------------cc---------
Confidence 88999977653210000 00
Q ss_pred cCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeE
Q 024549 160 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYE 198 (266)
Q Consensus 160 ~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 198 (266)
......+...+.+.+.+.+|.||+.....+.
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0155677888889999999999998865544
No 43
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.92 E-value=2.9e-09 Score=84.30 Aligned_cols=142 Identities=41% Similarity=0.680 Sum_probs=112.0
Q ss_pred hhhcCChHHHHHhhchh-hHhh---hhhhhccCCeEEEEcC-cEEEecCCCCCCC-CCHHHHhcccCCC--CCCCcchhh
Q 024549 73 NRIYGFYDECKRRFNVR-VWKT---FTDCFNCLPVAALVDE-KILCMHGGLSPDL-KNLDQIRNIARPV--DVPDQGLLC 144 (266)
Q Consensus 73 ~~~~gf~~e~~~~~~~~-~~~~---~~~~~~~LPl~~~i~~-~~l~vHgGi~p~~-~~l~~i~~i~r~~--~~~~~~~~~ 144 (266)
...+++..++...+... .|.. ..++|+.+|+.+++.. .++|.|+++++.. ..+++++.+.|.. .....+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~ 83 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTH 83 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccc
Confidence 34456666666666543 5665 8999999999998888 8999999999965 5777777776655 455566667
Q ss_pred hhhhcCCCCC-CCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCC
Q 024549 145 DLLWADPDKD-IEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYC 215 (266)
Q Consensus 145 dllWsdp~~~-~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~ 215 (266)
+.+|+++... ...|.++++|....+ ++....|+..+..+.+.++|+....++.....+..+|.|++++|+
T Consensus 84 ~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 84 DLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred cccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 7799998763 577888888887766 778888987777777999999999999887776899999999986
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.89 E-value=5.2e-09 Score=86.05 Aligned_cols=67 Identities=27% Similarity=0.267 Sum_probs=47.8
Q ss_pred CEEEEccCCCHHHHHHHH-HhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 1 MIYDCDVHGQFSDLLRLF-EYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
|.+++|+|++...+...+ +.......+.++++||+++++..+.... ++. ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 457889999988776665 3233455678899999999987765543 222 223456799999999986
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.77 E-value=6.9e-08 Score=76.49 Aligned_cols=107 Identities=17% Similarity=0.195 Sum_probs=74.4
Q ss_pred EEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChHH
Q 024549 2 IYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 81 (266)
Q Consensus 2 i~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 81 (266)
++|||.||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 3789999998877777664 45678899999974 3444555443 2335899999999
Q ss_pred HHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCccC
Q 024549 82 CKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGEN 161 (266)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~ 161 (266)
-+++++|+-+.+.. . .+
T Consensus 57 ---------------------------~~Ilv~H~pp~~~~-~------------------------~~----------- 73 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGIG-D------------------------GE----------- 73 (129)
T ss_pred ---------------------------cCEEEECCCCCcCc-C------------------------cc-----------
Confidence 37899998321100 0 00
Q ss_pred CCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeE
Q 024549 162 DRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYE 198 (266)
Q Consensus 162 ~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 198 (266)
+ ...-|.+++.+++++.+.+.++.||...+..+.
T Consensus 74 -~--~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 74 -D--FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred -c--ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 0 012456778888899999999999999877665
No 46
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.77 E-value=1.7e-07 Score=74.90 Aligned_cols=117 Identities=23% Similarity=0.251 Sum_probs=74.5
Q ss_pred CEEEEccCCCHH------H----HHHHHHhcCCCCCceEEEeCCcccCCCCcH--HHHHHHHHhhhhcCCcEEEEcCCcc
Q 024549 1 MIYDCDVHGQFS------D----LLRLFEYGGYPPEANYLFLGDYVDRGKQSI--ETICLLLAYKVKYKENFFLLRGNHE 68 (266)
Q Consensus 1 ii~IgDiHG~~~------~----l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~lk~~~p~~v~~lrGNHE 68 (266)
|+.|+|+|=... . |.++++.+.-.+.+.++++||+++.|.... +...++..++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 578899994321 1 223444444455688999999999987421 2223333332211 37999999999
Q ss_pred ccchhhhcCChHHHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhh
Q 024549 69 CASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLW 148 (266)
Q Consensus 69 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllW 148 (266)
. ++++|.-+.+....
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~------------------------ 94 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGS------------------------ 94 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCcc------------------------
Confidence 8 88899855432100
Q ss_pred cCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeE
Q 024549 149 ADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYE 198 (266)
Q Consensus 149 sdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 198 (266)
+... . .+.+.+.+++++.++++++.||+..+..+.
T Consensus 95 ---------~~~~-----~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 95 ---------GRER-----L-LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred ---------cccc-----C-CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 0000 0 155678888999999999999999865544
No 47
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.76 E-value=2.9e-07 Score=80.52 Aligned_cols=203 Identities=15% Similarity=0.206 Sum_probs=100.4
Q ss_pred CEEEEccCCCH------HHHHHHHHhcCCCCCceEEEeCCcccC-------CCCcHHHHHHHHHhhhhcCCcEEEEcCCc
Q 024549 1 MIYDCDVHGQF------SDLLRLFEYGGYPPEANYLFLGDYVDR-------GKQSIETICLLLAYKVKYKENFFLLRGNH 67 (266)
Q Consensus 1 ii~IgDiHG~~------~~l~~~l~~~~~~~~~~~vfLGD~vDr-------G~~s~evl~~l~~lk~~~p~~v~~lrGNH 67 (266)
+++|+|+|... ..+.+.|+.. ....+.++++||++|. .+...+++.++..|+. .+..+++++|||
T Consensus 3 i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~GNH 80 (241)
T PRK05340 3 TLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHGNR 80 (241)
T ss_pred EEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeCCC
Confidence 46888999542 2455555432 2346789999999985 2334566666666653 335799999999
Q ss_pred cccchhhhcCChHHHHHhhchhhHhhhhhhhccCCeEEEEc-CcEEEecCCCCCCCC-CHHHHhcccC-CC------CCC
Q 024549 68 ECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDLK-NLDQIRNIAR-PV------DVP 138 (266)
Q Consensus 68 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~~~i~-~~~l~vHgGi~p~~~-~l~~i~~i~r-~~------~~~ 138 (266)
|..... ...+..+. ..+.. |....++ .+++++||-..+... .-...+++-| |. ..|
T Consensus 81 D~~~~~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~~p 145 (241)
T PRK05340 81 DFLLGK-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLALP 145 (241)
T ss_pred chhhhH-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974321 11111111 11211 2222333 469999997654211 1111222211 10 000
Q ss_pred C---cchhhhhhh-cCCCCCCCCCccCCCC-ceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCC
Q 024549 139 D---QGLLCDLLW-ADPDKDIEGWGENDRG-VSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPN 213 (266)
Q Consensus 139 ~---~~~~~dllW-sdp~~~~~~~~~~~rg-~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~ 213 (266)
. ..+...+-. |.... ..+. .-.-..++++.+.+++.+++.+|.||+..+.-.....++.-++-.+-++
T Consensus 146 ~~~~~~ia~~~~~~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgd 218 (241)
T PRK05340 146 LSIRLRIAAKMRAKSKAAN-------QSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGD 218 (241)
T ss_pred HHHHHHHHHHHHHHHHHhc-------CCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCC
Confidence 0 000000000 00000 0000 1112345678888999999999999998764333322321112222222
Q ss_pred CCCCCCCcEEEEEEcCCC
Q 024549 214 YCGEFDNAGAMMSVDDTL 231 (266)
Q Consensus 214 y~~~~~n~ga~l~i~~~~ 231 (266)
. ...+.++.++++.
T Consensus 219 w----~~~~~~~~~~~~~ 232 (241)
T PRK05340 219 W----HEQGSVLKVDADG 232 (241)
T ss_pred C----CCCCeEEEEECCc
Confidence 2 1346778887763
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.70 E-value=1.2e-07 Score=82.33 Aligned_cols=205 Identities=15% Similarity=0.159 Sum_probs=98.8
Q ss_pred CEEEEccCCCH------HHHHHHHHhcCCCCCceEEEeCCcccCC-----CC--cHHHHHHHHHhhhhcCCcEEEEcCCc
Q 024549 1 MIYDCDVHGQF------SDLLRLFEYGGYPPEANYLFLGDYVDRG-----KQ--SIETICLLLAYKVKYKENFFLLRGNH 67 (266)
Q Consensus 1 ii~IgDiHG~~------~~l~~~l~~~~~~~~~~~vfLGD~vDrG-----~~--s~evl~~l~~lk~~~p~~v~~lrGNH 67 (266)
.++|+|+|... ..+.+.|.... ...+.++++||++|.. +. ..++...+..|+. .+..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999543 23444444322 2467899999999952 11 1344555555543 346799999999
Q ss_pred cccchhhhcCChHHHHHhhchhhHhhhhhhhccCCeEEE-EcCcEEEecCCCCCCC-CCHHHHhccc-CCCC------CC
Q 024549 68 ECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAAL-VDEKILCMHGGLSPDL-KNLDQIRNIA-RPVD------VP 138 (266)
Q Consensus 68 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~~~-i~~~~l~vHgGi~p~~-~~l~~i~~i~-r~~~------~~ 138 (266)
|...-. ...+..+. ..+.. |.... -+.+++++||-.-..- ......+++. .|.- .+
T Consensus 79 D~~~~~-------~~~~~~gi-------~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAGM-------TLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCCC-------EEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974211 01111111 11222 12222 2457999999654211 1111112211 1110 00
Q ss_pred --CcchhhhhhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCC
Q 024549 139 --DQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCG 216 (266)
Q Consensus 139 --~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~ 216 (266)
....+...+++..... .. ..+ ..-....+.++++.+++.+++++|.||+..+.-.....++.-.+-.+-++..
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~- 218 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-KQ--MKS-QDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY- 218 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-cC--CCc-chhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc-
Confidence 0111222333221100 00 000 0111235667888889999999999999876544333232212333333331
Q ss_pred CCCCcEEEEEEcCC
Q 024549 217 EFDNAGAMMSVDDT 230 (266)
Q Consensus 217 ~~~n~ga~l~i~~~ 230 (266)
..+.++.++++
T Consensus 219 ---~~~~~~~~~~~ 229 (231)
T TIGR01854 219 ---RQGSILRVDAD 229 (231)
T ss_pred ---cCCeEEEEcCC
Confidence 23556666654
No 49
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.65 E-value=3.9e-07 Score=79.51 Aligned_cols=67 Identities=19% Similarity=0.183 Sum_probs=48.2
Q ss_pred CEEEEccCCCH------HHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 1 MIYDCDVHGQF------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 1 ii~IgDiHG~~------~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
|+.|+|+|.++ ..+.++++.+.-...+.+|++||++++.+.+.+.+..+..+ .+..+++++||||..
T Consensus 2 i~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 2 IAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred EEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 46788999763 23566666655455788999999999876666655555432 345799999999974
No 50
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.62 E-value=4.9e-06 Score=71.19 Aligned_cols=203 Identities=16% Similarity=0.164 Sum_probs=116.7
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcc--cCCCCcHHHHHH-HHHhhhhcCCcEEEEcCCccccchhhhcC
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYV--DRGKQSIETICL-LLAYKVKYKENFFLLRGNHECASINRIYG 77 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~v--DrG~~s~evl~~-l~~lk~~~p~~v~~lrGNHE~~~~~~~~g 77 (266)
+++++|+||.++.+.+++..+.-...+-+++.||+. +.|+.-...-.. +..++ ...-.|+.++||.|...+..
T Consensus 6 il~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~--- 81 (226)
T COG2129 6 ILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVID--- 81 (226)
T ss_pred EEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH---
Confidence 368889999999999999988777778899999999 888754333221 33333 24568999999988765431
Q ss_pred ChHHHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCC-C-----CHHHHhcccCCCCCCCcchhhhhhhcCC
Q 024549 78 FYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDL-K-----NLDQIRNIARPVDVPDQGLLCDLLWADP 151 (266)
Q Consensus 78 f~~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~-~-----~l~~i~~i~r~~~~~~~~~~~dllWsdp 151 (266)
.....+..+.. -...+++-.++-=||..|.. . +-++|....+..-........=++.--|
T Consensus 82 ----~l~~~~~~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~HaP 147 (226)
T COG2129 82 ----VLKNAGVNVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILLTHAP 147 (226)
T ss_pred ----HHHhccccccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEEecCC
Confidence 01111111100 11122322333335554421 1 2233322211100000000001111112
Q ss_pred CCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCC
Q 024549 152 DKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDT 230 (266)
Q Consensus 152 ~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~ 230 (266)
+...... .+.| -.--|..+++++.++.+-.+.|+||-....|+..-.+ ||+..|.-.+ ....|++.++++
T Consensus 148 P~gt~~d--~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l~~~ 217 (226)
T COG2129 148 PYGTLLD--TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIELEKE 217 (226)
T ss_pred CCCcccc--CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEecCc
Confidence 2111111 1222 1235999999999999999999999998889887655 7888887644 367788888877
No 51
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.60 E-value=2.2e-06 Score=73.62 Aligned_cols=192 Identities=16% Similarity=0.106 Sum_probs=96.3
Q ss_pred CEEEEccCCC----HHHH----HHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhh--cCCcEEEEcCCcccc
Q 024549 1 MIYDCDVHGQ----FSDL----LRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVK--YKENFFLLRGNHECA 70 (266)
Q Consensus 1 ii~IgDiHG~----~~~l----~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~--~p~~v~~lrGNHE~~ 70 (266)
+++++|+|-- ...+ ..+++.+.-...+.+|++||++|.+....+--.+...++.. .+-.++.++||||..
T Consensus 3 ~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~~ 82 (214)
T cd07399 3 LAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHDLV 82 (214)
T ss_pred EEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCcch
Confidence 4678899952 2223 33444443344578899999999998443221222222222 245688999999943
Q ss_pred chhhhcCChHHHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcC
Q 024549 71 SINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWAD 150 (266)
Q Consensus 71 ~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsd 150 (266)
. ...+.. ..+.++-+.+.++..|- ..-++++|-=+.+..... ....|..
T Consensus 83 ~-~ld~~~--------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~------------------~~~~~~~ 131 (214)
T cd07399 83 L-ALEFGP--------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRP------------------DSIDYDS 131 (214)
T ss_pred h-hCCCCC--------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcC------------------ccccccc
Confidence 2 111111 11122222333333221 124778887433211000 0000100
Q ss_pred CCCCCCCCccCCCCceeecChhHHHHHHHHC-CCceEEeeeeeeccCeEEe-----cCCeEEEEecCCCCCCCCCCcE--
Q 024549 151 PDKDIEGWGENDRGVSYTFGADKVVEFLQKH-DLDLICRAHQVVEDGYEFF-----AKRQLVTVFSAPNYCGEFDNAG-- 222 (266)
Q Consensus 151 p~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~-~~~~iIrgH~~~~~G~~~~-----~~~~~itifSa~~y~~~~~n~g-- 222 (266)
....+.+.+.+.++++ ++++++.||.... +.... .++.+..+.+...... +...|
T Consensus 132 ---------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~-~~g~~~~ 194 (214)
T cd07399 132 ---------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEP-NGGNGFL 194 (214)
T ss_pred ---------------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCC-CCCcceE
Confidence 0123555677888888 7999999998753 33322 1344555555432211 12233
Q ss_pred EEEEEcCCC-ceEEEEEec
Q 024549 223 AMMSVDDTL-TCSFQILKA 240 (266)
Q Consensus 223 a~l~i~~~~-~~~~~~~~~ 240 (266)
.++.++++. .+.+..+.|
T Consensus 195 r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 195 RLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEecCCCEEEEEeCCC
Confidence 356666663 666666655
No 52
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.48 E-value=7.9e-06 Score=67.92 Aligned_cols=156 Identities=16% Similarity=0.128 Sum_probs=93.0
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
|++|+|.|+...+..+.++.......+.+|.+||++...... .+-. ....+++.++||.|.....
T Consensus 4 ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~---~~~~~i~~V~GN~D~~~~~------- 68 (172)
T COG0622 4 ILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEG---GLAAKLIAVRGNCDGEVDQ------- 68 (172)
T ss_pred EEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhc---ccccceEEEEccCCCcccc-------
Confidence 468889999997666666666667778899999999755431 1111 0245899999999986432
Q ss_pred HHHHhhchhhHhhhhhhhccCCeEE--EE-cCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCC
Q 024549 81 ECKRRFNVRVWKTFTDCFNCLPVAA--LV-DEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEG 157 (266)
Q Consensus 81 e~~~~~~~~~~~~~~~~~~~LPl~~--~i-~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 157 (266)
..+|... .+ +-+++++||.....-
T Consensus 69 ------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~----------------------------------- 95 (172)
T COG0622 69 ------------------EELPEELVLEVGGVKIFLTHGHLYFVK----------------------------------- 95 (172)
T ss_pred ------------------ccCChhHeEEECCEEEEEECCCccccc-----------------------------------
Confidence 1222221 22 358999999553211
Q ss_pred CccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCC--CCCcEEEEEEcCC-CceE
Q 024549 158 WGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGE--FDNAGAMMSVDDT-LTCS 234 (266)
Q Consensus 158 ~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~--~~n~ga~l~i~~~-~~~~ 234 (266)
.....++.+-+..+++.+|.||+..+. ++.. ++ +++-+|.-+.. +.+..+++.++.+ .++.
T Consensus 96 -----------~~~~~l~~la~~~~~Dvli~GHTH~p~-~~~~-~~---i~~vNPGS~s~pr~~~~~sy~il~~~~~~~~ 159 (172)
T COG0622 96 -----------TDLSLLEYLAKELGADVLIFGHTHKPV-AEKV-GG---ILLVNPGSVSGPRGGNPASYAILDVDNLEVE 159 (172)
T ss_pred -----------cCHHHHHHHHHhcCCCEEEECCCCccc-EEEE-CC---EEEEcCCCcCCCCCCCCcEEEEEEcCCCEEE
Confidence 222345666677789999999999854 3332 22 33334433221 1234345555544 4555
Q ss_pred EEEEec
Q 024549 235 FQILKA 240 (266)
Q Consensus 235 ~~~~~~ 240 (266)
...+..
T Consensus 160 ~~~~~~ 165 (172)
T COG0622 160 VLFLER 165 (172)
T ss_pred EEEeec
Confidence 544443
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.44 E-value=8.6e-06 Score=68.95 Aligned_cols=68 Identities=12% Similarity=0.067 Sum_probs=42.4
Q ss_pred CEEEEccCCCHH------------HHHHHHHhcCCCCCceEEEeCCcccCCCCc---HHHHHHHHHhhhhcCCcEEEEcC
Q 024549 1 MIYDCDVHGQFS------------DLLRLFEYGGYPPEANYLFLGDYVDRGKQS---IETICLLLAYKVKYKENFFLLRG 65 (266)
Q Consensus 1 ii~IgDiHG~~~------------~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~lk~~~p~~v~~lrG 65 (266)
++.|+|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..++.......-.++++.|
T Consensus 5 i~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~G 84 (199)
T cd07383 5 ILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFG 84 (199)
T ss_pred EEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECc
Confidence 367889996322 122222222334457899999999977653 45555554333334567899999
Q ss_pred Ccc
Q 024549 66 NHE 68 (266)
Q Consensus 66 NHE 68 (266)
|||
T Consensus 85 NHD 87 (199)
T cd07383 85 NHD 87 (199)
T ss_pred cCC
Confidence 999
No 54
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.36 E-value=2.2e-05 Score=69.85 Aligned_cols=68 Identities=15% Similarity=0.091 Sum_probs=44.6
Q ss_pred CEEEEccC-C-----------CHHHHHHHHHhcCC--CCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCC
Q 024549 1 MIYDCDVH-G-----------QFSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGN 66 (266)
Q Consensus 1 ii~IgDiH-G-----------~~~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGN 66 (266)
++.|+|+| . ..+.|.++++.+.. +..+-+|+.||+++.|. .+-...+.+.-...+..++.++||
T Consensus 17 i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~GN 94 (275)
T PRK11148 17 ILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLPGN 94 (275)
T ss_pred EEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeCCC
Confidence 35778999 1 24668888876533 24577889999999874 222222222222345679999999
Q ss_pred cccc
Q 024549 67 HECA 70 (266)
Q Consensus 67 HE~~ 70 (266)
||..
T Consensus 95 HD~~ 98 (275)
T PRK11148 95 HDFQ 98 (275)
T ss_pred CCCh
Confidence 9974
No 55
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.35 E-value=1.2e-05 Score=71.27 Aligned_cols=72 Identities=19% Similarity=0.160 Sum_probs=48.4
Q ss_pred CEEEEccC--C-----------CHHHHHHHHHhcCCCCCceEEEeCCcccCCCC-cHHHHHHHHHhhhhcCCcEEEEcCC
Q 024549 1 MIYDCDVH--G-----------QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQ-SIETICLLLAYKVKYKENFFLLRGN 66 (266)
Q Consensus 1 ii~IgDiH--G-----------~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~lk~~~p~~v~~lrGN 66 (266)
+++|+|+| . ....|.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+..++.++||
T Consensus 3 ~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~GN 82 (267)
T cd07396 3 FGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLGN 82 (267)
T ss_pred EEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecCc
Confidence 46788999 2 24667777877755556789999999998873 2233333332222234579999999
Q ss_pred ccccch
Q 024549 67 HECASI 72 (266)
Q Consensus 67 HE~~~~ 72 (266)
||....
T Consensus 83 HD~~~~ 88 (267)
T cd07396 83 HDLYNP 88 (267)
T ss_pred cccccc
Confidence 998643
No 56
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.34 E-value=2.9e-05 Score=68.40 Aligned_cols=69 Identities=14% Similarity=0.068 Sum_probs=42.3
Q ss_pred EEEEccCCCH----------------HHHHHHHHhcCC--CCCceEEEeCCcccCCCCcH---HHHHHH-HHhhhh-cCC
Q 024549 2 IYDCDVHGQF----------------SDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSI---ETICLL-LAYKVK-YKE 58 (266)
Q Consensus 2 i~IgDiHG~~----------------~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~s~---evl~~l-~~lk~~-~p~ 58 (266)
++|+|+|--. ..|+++++.+.. +..+-++++||+++.|.... +....+ ..++.. .+-
T Consensus 8 ~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~v 87 (262)
T cd07395 8 IQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDPDI 87 (262)
T ss_pred EEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccCCC
Confidence 5677888663 235566665543 24567889999999987542 111222 112211 234
Q ss_pred cEEEEcCCcccc
Q 024549 59 NFFLLRGNHECA 70 (266)
Q Consensus 59 ~v~~lrGNHE~~ 70 (266)
.++.++||||..
T Consensus 88 p~~~i~GNHD~~ 99 (262)
T cd07395 88 PLVCVCGNHDVG 99 (262)
T ss_pred cEEEeCCCCCCC
Confidence 699999999974
No 57
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.34 E-value=1e-06 Score=78.47 Aligned_cols=68 Identities=21% Similarity=0.147 Sum_probs=49.1
Q ss_pred CEEEEccCCC----HHHHHHHHHhcCCCCCceEEEeCCcccCC-C-CcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 1 MIYDCDVHGQ----FSDLLRLFEYGGYPPEANYLFLGDYVDRG-K-QSIETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 1 ii~IgDiHG~----~~~l~~~l~~~~~~~~~~~vfLGD~vDrG-~-~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
|+.++|+|.. ...+.++++.+.-...+.++++||++|++ + ...++...+..|+. +..++.+.||||..
T Consensus 52 I~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~--~~pv~~V~GNHD~~ 125 (271)
T PRK11340 52 ILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAE--CAPTFACFGNHDRP 125 (271)
T ss_pred EEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhh--cCCEEEecCCCCcc
Confidence 4678899976 55677777776555678899999999954 2 33345555666654 34599999999974
No 58
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.34 E-value=9.6e-06 Score=70.21 Aligned_cols=68 Identities=21% Similarity=0.183 Sum_probs=44.7
Q ss_pred CEEEEccCCC------------HHHHHHHHHhcCCC--CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCC
Q 024549 1 MIYDCDVHGQ------------FSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGN 66 (266)
Q Consensus 1 ii~IgDiHG~------------~~~l~~~l~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGN 66 (266)
++.|+|+|=. ...|.++++.+.-. ..+-+|++||+++.|... ....+.+.....+..++.++||
T Consensus 2 ~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~GN 79 (240)
T cd07402 2 LAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPGN 79 (240)
T ss_pred EEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCCC
Confidence 4678899944 34577777765443 567889999999987532 1122222212235579999999
Q ss_pred cccc
Q 024549 67 HECA 70 (266)
Q Consensus 67 HE~~ 70 (266)
||..
T Consensus 80 HD~~ 83 (240)
T cd07402 80 HDDR 83 (240)
T ss_pred CCCH
Confidence 9974
No 59
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.29 E-value=9.5e-06 Score=70.55 Aligned_cols=68 Identities=25% Similarity=0.197 Sum_probs=41.0
Q ss_pred CEEEEccCCC---------H-----HHHHHHHHhcC--CCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEc
Q 024549 1 MIYDCDVHGQ---------F-----SDLLRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLR 64 (266)
Q Consensus 1 ii~IgDiHG~---------~-----~~l~~~l~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lr 64 (266)
|++++|||-. + +.+.++.+.+. .++.|-+|+.||++++++.. +....+..|+. .+..+++++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEe
Confidence 5788999955 1 22233333211 23678888999999887643 32222222332 244589999
Q ss_pred CCcccc
Q 024549 65 GNHECA 70 (266)
Q Consensus 65 GNHE~~ 70 (266)
||||..
T Consensus 79 GNHD~~ 84 (232)
T cd07393 79 GNHDYW 84 (232)
T ss_pred CCcccc
Confidence 999973
No 60
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.29 E-value=1.4e-06 Score=74.58 Aligned_cols=69 Identities=25% Similarity=0.180 Sum_probs=50.8
Q ss_pred CEEEEccCCCHH----HHHHHHHhcCCCCCceEEEeCCcccCCCCcH-HHHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549 1 MIYDCDVHGQFS----DLLRLFEYGGYPPEANYLFLGDYVDRGKQSI-ETICLLLAYKVKYKENFFLLRGNHECAS 71 (266)
Q Consensus 1 ii~IgDiHG~~~----~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~lk~~~p~~v~~lrGNHE~~~ 71 (266)
|++++|+|.... .+.++++.+.....+.++++||++|.+.... ++..++..++ .+..++++.||||...
T Consensus 4 i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 4 IAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred EEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 467889998744 6777777665555678899999999988765 4555554443 3457999999999854
No 61
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.28 E-value=9.8e-07 Score=75.27 Aligned_cols=69 Identities=22% Similarity=0.280 Sum_probs=39.0
Q ss_pred EEEEccCC---CHHH---HHHHHHhcCCCCCceEEEeCCcccCC--C-----CcH-HHHHHHHHhhhhcCCcEEEEcCCc
Q 024549 2 IYDCDVHG---QFSD---LLRLFEYGGYPPEANYLFLGDYVDRG--K-----QSI-ETICLLLAYKVKYKENFFLLRGNH 67 (266)
Q Consensus 2 i~IgDiHG---~~~~---l~~~l~~~~~~~~~~~vfLGD~vDrG--~-----~s~-evl~~l~~lk~~~p~~v~~lrGNH 67 (266)
++|+|+|- ...+ +..+++.......+.+|++||++|.- . ... +.+..++.+. ..+..++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 47899992 2222 22222221113568899999999841 1 111 2222333222 3456899999999
Q ss_pred cccc
Q 024549 68 ECAS 71 (266)
Q Consensus 68 E~~~ 71 (266)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9854
No 62
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.24 E-value=8.6e-06 Score=78.67 Aligned_cols=110 Identities=18% Similarity=0.268 Sum_probs=57.9
Q ss_pred CEEEEccC-CCH----HHHHHHHHhcC---------CCCCceEEEeCCcccC-CCCc---------------HHHHHHHH
Q 024549 1 MIYDCDVH-GQF----SDLLRLFEYGG---------YPPEANYLFLGDYVDR-GKQS---------------IETICLLL 50 (266)
Q Consensus 1 ii~IgDiH-G~~----~~l~~~l~~~~---------~~~~~~~vfLGD~vDr-G~~s---------------~evl~~l~ 50 (266)
++.|+|+| |.. ..+..+++.+. ....+.+|++||++|. |+.+ .++..+|.
T Consensus 246 i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~L~ 325 (504)
T PRK04036 246 AVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEYLK 325 (504)
T ss_pred EEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHHHH
Confidence 35788999 652 23444444432 2234689999999994 3221 12334444
Q ss_pred HhhhhcCCcEEEEcCCccccchhhhc-CChHHHHHhhchhhHhhhhhhhccCCeEEEEcC-cEEEecCC
Q 024549 51 AYKVKYKENFFLLRGNHECASINRIY-GFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGG 117 (266)
Q Consensus 51 ~lk~~~p~~v~~lrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~-~~l~vHgG 117 (266)
.+. ..-.|++++||||........ .+...+...+. ..-..++.. |....+++ +++++||-
T Consensus 326 ~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~----~~~v~~lsN-P~~i~l~G~~iLl~HG~ 387 (504)
T PRK04036 326 QIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFP----EHNVTFVSN-PALVNLHGVDVLIYHGR 387 (504)
T ss_pred hhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcC----cCCeEEecC-CeEEEECCEEEEEECCC
Confidence 332 334799999999975432111 11111111111 112234444 65444443 68999984
No 63
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.14 E-value=2.5e-05 Score=63.89 Aligned_cols=48 Identities=25% Similarity=0.277 Sum_probs=30.2
Q ss_pred CCCceEEEeCCcccCCCCcH-HHH-HHHHHhhhh----cCCcEEEEcCCccccc
Q 024549 24 PPEANYLFLGDYVDRGKQSI-ETI-CLLLAYKVK----YKENFFLLRGNHECAS 71 (266)
Q Consensus 24 ~~~~~~vfLGD~vDrG~~s~-evl-~~l~~lk~~----~p~~v~~lrGNHE~~~ 71 (266)
...+.+|++||++|.+.... +.. ..+..++.. .+..+++++||||...
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 34578999999999876432 221 222222222 1347999999999853
No 64
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.10 E-value=2.1e-05 Score=67.97 Aligned_cols=199 Identities=17% Similarity=0.240 Sum_probs=102.0
Q ss_pred EEEEccCCC------HHHHHHHHHhcCCCCCceEEEeCCcccC--CCC---c--HHHHHHHHHhhhhcCCcEEEEcCCcc
Q 024549 2 IYDCDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVDR--GKQ---S--IETICLLLAYKVKYKENFFLLRGNHE 68 (266)
Q Consensus 2 i~IgDiHG~------~~~l~~~l~~~~~~~~~~~vfLGD~vDr--G~~---s--~evl~~l~~lk~~~p~~v~~lrGNHE 68 (266)
+.|+|+|=. .+.|.++|+... +..+.+++|||++|- |.+ . .+|...|..+ .+.+.+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchH
Confidence 468999965 334566666533 345789999999972 322 1 2344444333 235678999999999
Q ss_pred ccchhhhcCChHHHHHhhchhhHhhhhhhhccCCeEEEE---cCcEEEecCCCCCCC-C-----------CHHHHhcccC
Q 024549 69 CASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALV---DEKILCMHGGLSPDL-K-----------NLDQIRNIAR 133 (266)
Q Consensus 69 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~~~i---~~~~l~vHgGi~p~~-~-----------~l~~i~~i~r 133 (266)
...-+ .++.+ .--+.-+|-...+ +++++++||-.--.. . .+.+..-+..
T Consensus 79 fll~~-----------~f~~~-----~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl 142 (237)
T COG2908 79 FLLGK-----------RFAQE-----AGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNL 142 (237)
T ss_pred HHHHH-----------HHHhh-----cCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHh
Confidence 54322 11100 0002233333222 468999999643211 0 0011111111
Q ss_pred CCCCCCcchhhhhhhcCCCCCCCCCccCCCCce---eecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEec
Q 024549 134 PVDVPDQGLLCDLLWADPDKDIEGWGENDRGVS---YTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFS 210 (266)
Q Consensus 134 ~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~---~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifS 210 (266)
|.. -..-+..-+|+... |........ .-..++++.+-+++.+++.+|.||+..+..-....-.+| .
T Consensus 143 ~l~--~R~ri~~k~r~~s~-----~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi-~--- 211 (237)
T COG2908 143 PLR--VRRRIAYKIRSLSS-----WAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYI-N--- 211 (237)
T ss_pred HHH--HHHHHHHHHHHhhH-----HhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEE-e---
Confidence 111 00111223344331 111111111 124567788889999999999999998766554331111 1
Q ss_pred CCCCCCCCCCcEEEEEEcCCCce
Q 024549 211 APNYCGEFDNAGAMMSVDDTLTC 233 (266)
Q Consensus 211 a~~y~~~~~n~ga~l~i~~~~~~ 233 (266)
+|.--..++++.++.+...
T Consensus 212 ----lGdW~~~~s~~~v~~~~~~ 230 (237)
T COG2908 212 ----LGDWVSEGSILEVDDGGLE 230 (237)
T ss_pred ----cCcchhcceEEEEecCcEE
Confidence 1112246788888887543
No 65
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.07 E-value=0.00014 Score=64.26 Aligned_cols=72 Identities=19% Similarity=0.222 Sum_probs=50.6
Q ss_pred CEEEEccCCC------HHHHHHHHHhcCCCCCceEEEeCCcccCCCC-cHHHHHHHHHhhhhcCCcEEEEcCCccccchh
Q 024549 1 MIYDCDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQ-SIETICLLLAYKVKYKENFFLLRGNHECASIN 73 (266)
Q Consensus 1 ii~IgDiHG~------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 73 (266)
|+.|+|+|-. ...+.++++.+...+.|.+|+.||+.+.|.. +.+-+..++. +...+..+++++||||.+...
T Consensus 3 i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~~~~~ 81 (301)
T COG1409 3 IAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDARVVN 81 (301)
T ss_pred EEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcCCchH
Confidence 4678899987 3456677777776666899999999999632 2222222222 224677899999999998765
No 66
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.01 E-value=4.9e-05 Score=67.11 Aligned_cols=71 Identities=23% Similarity=0.178 Sum_probs=42.7
Q ss_pred CEEEEccCCCHH------HH-HHHHHhcCCCCCceEEEeCCcccCCCCc--------H---HHHHHHHHhhhhcCCcEEE
Q 024549 1 MIYDCDVHGQFS------DL-LRLFEYGGYPPEANYLFLGDYVDRGKQS--------I---ETICLLLAYKVKYKENFFL 62 (266)
Q Consensus 1 ii~IgDiHG~~~------~l-~~~l~~~~~~~~~~~vfLGD~vDrG~~s--------~---evl~~l~~lk~~~p~~v~~ 62 (266)
++.|+|+|-... .. ..+++.+.....+-+|++||++|+.... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 356789996322 12 3344544445567889999999987531 1 1222222222223567999
Q ss_pred EcCCccccc
Q 024549 63 LRGNHECAS 71 (266)
Q Consensus 63 lrGNHE~~~ 71 (266)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 67
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.01 E-value=2e-05 Score=65.35 Aligned_cols=58 Identities=19% Similarity=0.134 Sum_probs=35.0
Q ss_pred HHHHHHhcCCCCCceEEEeCCcccCCCCcH-HHHHHH-HHhhhhcCCcEEEEcCCccccc
Q 024549 14 LLRLFEYGGYPPEANYLFLGDYVDRGKQSI-ETICLL-LAYKVKYKENFFLLRGNHECAS 71 (266)
Q Consensus 14 l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l-~~lk~~~p~~v~~lrGNHE~~~ 71 (266)
+.++.+.+...+.+.+|++||+++....+. +....+ +......+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444444455689999999998654332 211111 1112234568999999999854
No 68
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.00 E-value=1.3e-05 Score=70.64 Aligned_cols=71 Identities=20% Similarity=0.239 Sum_probs=47.3
Q ss_pred CEEEEccCC-C-----------HHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHH----HHHHHhhhhcCCcEEEEc
Q 024549 1 MIYDCDVHG-Q-----------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETI----CLLLAYKVKYKENFFLLR 64 (266)
Q Consensus 1 ii~IgDiHG-~-----------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~lk~~~p~~v~~lr 64 (266)
++.++|+|- . ...|.++++.+.-...+.+++.||++|+...+.+.. .++..|+...|-.++++.
T Consensus 3 ilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i~ 82 (253)
T TIGR00619 3 ILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVIS 82 (253)
T ss_pred EEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence 367889993 2 234556666554455788999999999987665443 233344332335799999
Q ss_pred CCccccc
Q 024549 65 GNHECAS 71 (266)
Q Consensus 65 GNHE~~~ 71 (266)
||||...
T Consensus 83 GNHD~~~ 89 (253)
T TIGR00619 83 GNHDSAQ 89 (253)
T ss_pred cCCCChh
Confidence 9999853
No 69
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.92 E-value=2.2e-05 Score=72.16 Aligned_cols=70 Identities=21% Similarity=0.314 Sum_probs=47.2
Q ss_pred CEEEEccC-C-----------CHHHHHHHHHhcCCCCCceEEEeCCcccCC-CCcHHHHHHHHH--hh--hhcCCcEEEE
Q 024549 1 MIYDCDVH-G-----------QFSDLLRLFEYGGYPPEANYLFLGDYVDRG-KQSIETICLLLA--YK--VKYKENFFLL 63 (266)
Q Consensus 1 ii~IgDiH-G-----------~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~--lk--~~~p~~v~~l 63 (266)
++.++|+| | ....|.++++.+.-...+.+|+.||++|+. +.+.+++.++.. ++ ...+-.+++|
T Consensus 3 ilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~I 82 (340)
T PHA02546 3 ILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHVL 82 (340)
T ss_pred EEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 46788999 3 234556666665555668899999999985 455555444432 21 1235679999
Q ss_pred cCCcccc
Q 024549 64 RGNHECA 70 (266)
Q Consensus 64 rGNHE~~ 70 (266)
.||||..
T Consensus 83 ~GNHD~~ 89 (340)
T PHA02546 83 VGNHDMY 89 (340)
T ss_pred ccCCCcc
Confidence 9999974
No 70
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.91 E-value=0.00011 Score=71.17 Aligned_cols=69 Identities=20% Similarity=0.242 Sum_probs=47.3
Q ss_pred ChhHHHHHHHHCCCc----eEEeeeeeec--cCeEE-ecCCeEEEE---ecCCCCCCCCCCcEEEEEEcCCCceEEEEEe
Q 024549 170 GADKVVEFLQKHDLD----LICRAHQVVE--DGYEF-FAKRQLVTV---FSAPNYCGEFDNAGAMMSVDDTLTCSFQILK 239 (266)
Q Consensus 170 G~~~~~~fl~~~~~~----~iIrgH~~~~--~G~~~-~~~~~~iti---fSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 239 (266)
.++..+..|+..|++ .||-||+|+. .|-.. -++||++.| ||.+ |...++=+|= -.|.++-.......+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGY-TLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGY-TLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccce-EEEecCCcceeccCC
Confidence 455677889999998 9999999987 66553 578999999 5555 6555444444 445555555554444
Q ss_pred c
Q 024549 240 A 240 (266)
Q Consensus 240 ~ 240 (266)
|
T Consensus 585 p 585 (640)
T PF06874_consen 585 P 585 (640)
T ss_pred C
Confidence 4
No 71
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.84 E-value=4.1e-05 Score=63.23 Aligned_cols=67 Identities=24% Similarity=0.374 Sum_probs=45.2
Q ss_pred CEEEEccCCCHHHH---------------HHHHHhcC--CCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEE
Q 024549 1 MIYDCDVHGQFSDL---------------LRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLL 63 (266)
Q Consensus 1 ii~IgDiHG~~~~l---------------~~~l~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~l 63 (266)
+++|+|+|=..... .++++.+. ..+.+.+|++||+++++..+.. +.++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 46889999766532 22343322 2356889999999999987644 3444333 4579999
Q ss_pred cCCccccch
Q 024549 64 RGNHECASI 72 (266)
Q Consensus 64 rGNHE~~~~ 72 (266)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997644
No 72
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.82 E-value=4.4e-05 Score=65.05 Aligned_cols=73 Identities=23% Similarity=0.275 Sum_probs=49.0
Q ss_pred CEEEEccC-CCH--------------HHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHh-hhh--cCCcEEE
Q 024549 1 MIYDCDVH-GQF--------------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAY-KVK--YKENFFL 62 (266)
Q Consensus 1 ii~IgDiH-G~~--------------~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l-k~~--~p~~v~~ 62 (266)
++.++|+| |.. ..|.++++.+.....+.+|+.||++|....+.+.+..+... +.. ....+++
T Consensus 2 i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 81 (223)
T cd00840 2 FLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVFI 81 (223)
T ss_pred eEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
Confidence 46788999 322 24677777665556678999999999887655544443322 222 2557999
Q ss_pred EcCCccccchh
Q 024549 63 LRGNHECASIN 73 (266)
Q Consensus 63 lrGNHE~~~~~ 73 (266)
+.||||.....
T Consensus 82 ~~GNHD~~~~~ 92 (223)
T cd00840 82 IAGNHDSPSRL 92 (223)
T ss_pred ecCCCCCcccc
Confidence 99999986543
No 73
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.70 E-value=0.00013 Score=63.36 Aligned_cols=67 Identities=18% Similarity=0.158 Sum_probs=41.2
Q ss_pred CEEEEccC-CCHHH----------------HHHHHHhcCCCCCceEEEeCCcccCCCCc---HHHHHHHHHhhhhcCCcE
Q 024549 1 MIYDCDVH-GQFSD----------------LLRLFEYGGYPPEANYLFLGDYVDRGKQS---IETICLLLAYKVKYKENF 60 (266)
Q Consensus 1 ii~IgDiH-G~~~~----------------l~~~l~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~lk~~~p~~v 60 (266)
+++|+|+| |--.. |.++.+.+.....+.+|++||+++..... .++.+++..+ ...+
T Consensus 17 ~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~~v 92 (225)
T TIGR00024 17 KAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FRDL 92 (225)
T ss_pred eEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CCcE
Confidence 36889999 54222 22333333334568899999999765542 2222333222 3479
Q ss_pred EEEcCCccccc
Q 024549 61 FLLRGNHECAS 71 (266)
Q Consensus 61 ~~lrGNHE~~~ 71 (266)
++++||||...
T Consensus 93 ~~V~GNHD~~~ 103 (225)
T TIGR00024 93 ILIRGNHDALI 103 (225)
T ss_pred EEECCCCCCcc
Confidence 99999999764
No 74
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.69 E-value=0.00043 Score=57.44 Aligned_cols=49 Identities=22% Similarity=0.263 Sum_probs=31.3
Q ss_pred CCCCceEEEeCCcccCCCCcH--H---HHHHHHHhhh-hc----CCcEEEEcCCccccc
Q 024549 23 YPPEANYLFLGDYVDRGKQSI--E---TICLLLAYKV-KY----KENFFLLRGNHECAS 71 (266)
Q Consensus 23 ~~~~~~~vfLGD~vDrG~~s~--e---vl~~l~~lk~-~~----p~~v~~lrGNHE~~~ 71 (266)
....+.+|++||++|.+.... + .+..+..+.. .. +..++.++||||...
T Consensus 43 ~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 43 RLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred hcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 345678999999999987432 2 2222222211 11 456999999999864
No 75
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.66 E-value=0.00022 Score=61.26 Aligned_cols=71 Identities=20% Similarity=0.215 Sum_probs=43.5
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHH-------------------------HHHHHhhhh
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETI-------------------------CLLLAYKVK 55 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl-------------------------~~l~~lk~~ 55 (266)
|++|+|.||+++.+.++.+.+.-...|-++|+||++-....+-|-. +-++..--.
T Consensus 8 ilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L~~ 87 (255)
T PF14582_consen 8 ILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRILGE 87 (255)
T ss_dssp EEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHHHC
T ss_pred heeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHHHh
Confidence 4789999999999999988766556788999999986555444433 222222233
Q ss_pred cCCcEEEEcCCccccc
Q 024549 56 YKENFFLLRGNHECAS 71 (266)
Q Consensus 56 ~p~~v~~lrGNHE~~~ 71 (266)
.+..+++|+||||...
T Consensus 88 ~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 88 LGVPVFVVPGNMDAPE 103 (255)
T ss_dssp C-SEEEEE--TTS-SH
T ss_pred cCCcEEEecCCCCchH
Confidence 5678999999999854
No 76
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.56 E-value=0.0002 Score=67.28 Aligned_cols=71 Identities=18% Similarity=0.223 Sum_probs=54.0
Q ss_pred CEEEEccCCC------------HHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhh-------------
Q 024549 1 MIYDCDVHGQ------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVK------------- 55 (266)
Q Consensus 1 ii~IgDiHG~------------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~------------- 55 (266)
|+.++|+|-- +..|.++++.+.-...|-+|+.||++|+...|.+++..++.+-.+
T Consensus 6 Ilh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~~L 85 (405)
T TIGR00583 6 ILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELEFL 85 (405)
T ss_pred EEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchhhc
Confidence 3567799943 557888888877677788999999999999998887665433221
Q ss_pred -----------------------cCCcEEEEcCCccccc
Q 024549 56 -----------------------YKENFFLLRGNHECAS 71 (266)
Q Consensus 56 -----------------------~p~~v~~lrGNHE~~~ 71 (266)
..-.|++|-||||...
T Consensus 86 sd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 86 SDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred cchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1347999999999964
No 77
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.48 E-value=0.00036 Score=61.89 Aligned_cols=70 Identities=16% Similarity=0.247 Sum_probs=44.6
Q ss_pred CEEEEccCCCHHHHHHHHHh---cCCCCCceEEEeCCcccCCCCc-HHHH----------HHHHHh--hhhcCCcEEEEc
Q 024549 1 MIYDCDVHGQFSDLLRLFEY---GGYPPEANYLFLGDYVDRGKQS-IETI----------CLLLAY--KVKYKENFFLLR 64 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~---~~~~~~~~~vfLGD~vDrG~~s-~evl----------~~l~~l--k~~~p~~v~~lr 64 (266)
|.++||+||+++.+.+.++. ....+.+-+|++||+-..+..+ .+.+ ++.-.+ ....|-.+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 56788999999998765443 2335678899999997544322 2221 111111 222566689999
Q ss_pred CCcccc
Q 024549 65 GNHECA 70 (266)
Q Consensus 65 GNHE~~ 70 (266)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999964
No 78
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.45 E-value=0.00022 Score=67.21 Aligned_cols=70 Identities=19% Similarity=0.216 Sum_probs=45.3
Q ss_pred CEEEEccCCCH--------HH----HHHHHHhcCCCCCceEEEeCCcccCCCCcHHHH----HHHHHhhhhcCCcEEEEc
Q 024549 1 MIYDCDVHGQF--------SD----LLRLFEYGGYPPEANYLFLGDYVDRGKQSIETI----CLLLAYKVKYKENFFLLR 64 (266)
Q Consensus 1 ii~IgDiHG~~--------~~----l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~lk~~~p~~v~~lr 64 (266)
++.++|+|-.. .+ |.++++.+.-...+.+|+.||++|++..+.+.. .++..|+. .+..++++.
T Consensus 3 ilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~I~ 81 (407)
T PRK10966 3 ILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVVLA 81 (407)
T ss_pred EEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEEEc
Confidence 46788999321 11 334555444556788999999999986655432 23334432 345799999
Q ss_pred CCccccc
Q 024549 65 GNHECAS 71 (266)
Q Consensus 65 GNHE~~~ 71 (266)
||||...
T Consensus 82 GNHD~~~ 88 (407)
T PRK10966 82 GNHDSVA 88 (407)
T ss_pred CCCCChh
Confidence 9999854
No 79
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.44 E-value=0.00032 Score=62.94 Aligned_cols=71 Identities=21% Similarity=0.187 Sum_probs=47.4
Q ss_pred CEEEEccCCCHHH--HHHHHHhcCCCCCceEEEeCCcccC-CCCc-HHHHHHHHHhhhhcCCcEEEEcCCccccchh
Q 024549 1 MIYDCDVHGQFSD--LLRLFEYGGYPPEANYLFLGDYVDR-GKQS-IETICLLLAYKVKYKENFFLLRGNHECASIN 73 (266)
Q Consensus 1 ii~IgDiHG~~~~--l~~~l~~~~~~~~~~~vfLGD~vDr-G~~s-~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 73 (266)
|+.++|+|-+... ..+.+........|-+++.|||+|+ .+.+ ..++..+..|+ .|-.++++.||||...-.
T Consensus 47 iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~~~ 121 (284)
T COG1408 47 IVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGVDR 121 (284)
T ss_pred EEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEeccccccccc
Confidence 4678899988665 2233333333333888899999996 5444 44555555554 567899999999986543
No 80
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.36 E-value=0.0017 Score=57.96 Aligned_cols=68 Identities=15% Similarity=0.042 Sum_probs=39.5
Q ss_pred CEEEEccCC----CHHHHHHHHHhcCCCCCceEEEeCCcccCCCCc-----HHHHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549 1 MIYDCDVHG----QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENFFLLRGNHECAS 71 (266)
Q Consensus 1 ii~IgDiHG----~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 71 (266)
++++||.|. ....+.++.+. ....+-+|++||+++.+... -..+..+..+. ..-.++.++||||...
T Consensus 7 f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~~ 82 (294)
T cd00839 7 FAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA--SYVPYMVTPGNHEADY 82 (294)
T ss_pred EEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHH--hcCCcEEcCccccccc
Confidence 367889995 33344444433 23456788999999544322 11222222222 2346899999999864
Q ss_pred h
Q 024549 72 I 72 (266)
Q Consensus 72 ~ 72 (266)
.
T Consensus 83 ~ 83 (294)
T cd00839 83 N 83 (294)
T ss_pred C
Confidence 3
No 81
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.28 E-value=0.00052 Score=59.98 Aligned_cols=68 Identities=18% Similarity=0.245 Sum_probs=39.3
Q ss_pred EEEEccC--CCH---HHHHHHHHhcC-CC----CCceEEEeCCcccCCCC------------c---H-HHHHHHHHhhhh
Q 024549 2 IYDCDVH--GQF---SDLLRLFEYGG-YP----PEANYLFLGDYVDRGKQ------------S---I-ETICLLLAYKVK 55 (266)
Q Consensus 2 i~IgDiH--G~~---~~l~~~l~~~~-~~----~~~~~vfLGD~vDrG~~------------s---~-evl~~l~~lk~~ 55 (266)
+.|+|+| +.. ..+..+++.+. .. ..+.+|++||++|+... . . ++..++..|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6789999 331 22334444322 21 23789999999997310 0 1 1223333332
Q ss_pred cCCcEEEEcCCccccc
Q 024549 56 YKENFFLLRGNHECAS 71 (266)
Q Consensus 56 ~p~~v~~lrGNHE~~~ 71 (266)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2457999999999853
No 82
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.04 E-value=0.0012 Score=57.64 Aligned_cols=65 Identities=29% Similarity=0.332 Sum_probs=42.6
Q ss_pred CEEEEccCCCH---------HHHHHHHHhcCCCCCc-eEEEeCCcccCCCCcH-----HHHHHHHHhhhhcCCcEEEEcC
Q 024549 1 MIYDCDVHGQF---------SDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQSI-----ETICLLLAYKVKYKENFFLLRG 65 (266)
Q Consensus 1 ii~IgDiHG~~---------~~l~~~l~~~~~~~~~-~~vfLGD~vDrG~~s~-----evl~~l~~lk~~~p~~v~~lrG 65 (266)
|+.++|+||.+ ..+.++++...-...+ -++..||+++..+.+. .++..+-++ +..+ ...|
T Consensus 3 i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~G 77 (252)
T cd00845 3 ILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTIG 77 (252)
T ss_pred EEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eeec
Confidence 46788999886 5667777776544334 5577999999888653 344444333 3333 4569
Q ss_pred Ccccc
Q 024549 66 NHECA 70 (266)
Q Consensus 66 NHE~~ 70 (266)
|||.-
T Consensus 78 NHe~d 82 (252)
T cd00845 78 NHEFD 82 (252)
T ss_pred ccccc
Confidence 99973
No 83
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.03 E-value=0.0014 Score=55.63 Aligned_cols=46 Identities=20% Similarity=0.390 Sum_probs=32.9
Q ss_pred CCceEEEeCCcccCCCCcH--HHHHHHHHhhhhcC----CcEEEEcCCcccc
Q 024549 25 PEANYLFLGDYVDRGKQSI--ETICLLLAYKVKYK----ENFFLLRGNHECA 70 (266)
Q Consensus 25 ~~~~~vfLGD~vDrG~~s~--evl~~l~~lk~~~p----~~v~~lrGNHE~~ 70 (266)
..+-++||||++|.|+.+- +....+..++..++ ..++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 4578999999999999642 35555555543322 4688999999975
No 84
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.01 E-value=0.0017 Score=52.67 Aligned_cols=46 Identities=20% Similarity=0.229 Sum_probs=32.1
Q ss_pred CCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchh
Q 024549 24 PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASIN 73 (266)
Q Consensus 24 ~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 73 (266)
.|+|.+.+|||+.-.-.+..+...++-+| ++++++++||||-.--.
T Consensus 44 ~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~GNhDk~~~~ 89 (186)
T COG4186 44 GPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPGNHDKCHPM 89 (186)
T ss_pred CccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeCCCCCCccc
Confidence 56788999999986544444443333333 88999999999975433
No 85
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.77 E-value=0.0038 Score=58.36 Aligned_cols=72 Identities=21% Similarity=0.177 Sum_probs=50.9
Q ss_pred EEEEccCCC-------------HHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHh-hhhc--CCcEEEEcC
Q 024549 2 IYDCDVHGQ-------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAY-KVKY--KENFFLLRG 65 (266)
Q Consensus 2 i~IgDiHG~-------------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l-k~~~--p~~v~~lrG 65 (266)
+.++|.|=- +.+|..+++.+.-...|-+|+-||++|+..-|.+++..+... +... .-.|++|.|
T Consensus 4 lHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I~G 83 (390)
T COG0420 4 LHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVIAG 83 (390)
T ss_pred EEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEecC
Confidence 456688844 445666666665556688999999999999888887666433 2222 247999999
Q ss_pred Cccccchh
Q 024549 66 NHECASIN 73 (266)
Q Consensus 66 NHE~~~~~ 73 (266)
|||.....
T Consensus 84 NHD~~~~~ 91 (390)
T COG0420 84 NHDSPSRL 91 (390)
T ss_pred CCCchhcc
Confidence 99986543
No 86
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.64 E-value=0.0051 Score=49.99 Aligned_cols=119 Identities=17% Similarity=0.171 Sum_probs=79.7
Q ss_pred EEEEccCCCHHHHHHHHHhcCC--CCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549 2 IYDCDVHGQFSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 79 (266)
Q Consensus 2 i~IgDiHG~~~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 79 (266)
+++||+||+++.+.+-++.+.. .+-+-++++||+..-...+-+.-.+ +.=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y-~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAY-KDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHH-hcCCccCCCCEEEECCCCC-----------
Confidence 4789999999998877776322 3457788999999766655343333 3334457888999999998
Q ss_pred HHHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCc
Q 024549 80 DECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG 159 (266)
Q Consensus 80 ~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~ 159 (266)
.-.+|++|.=+. .+.+..+. ..+
T Consensus 69 ----------------------------~~DILlTh~wP~----gi~~~~~~----------------~~~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSEWPK----GISKLSKV----------------PFE--------- 91 (150)
T ss_pred ----------------------------CCCEEECCCCch----hhhhhCCC----------------ccc---------
Confidence 447899997221 11110000 000
Q ss_pred cCCCCceeecChhHHHHHHHHCCCceEEeeeeee
Q 024549 160 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVV 193 (266)
Q Consensus 160 ~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~ 193 (266)
..+..-|..++++++++..-.+.+.||...
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 011245888999999999999999999753
No 87
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.53 E-value=0.069 Score=47.25 Aligned_cols=25 Identities=4% Similarity=-0.072 Sum_probs=22.2
Q ss_pred ecChhHHHHHHHHCCCceEEeeeee
Q 024549 168 TFGADKVVEFLQKHDLDLICRAHQV 192 (266)
Q Consensus 168 ~fG~~~~~~fl~~~~~~~iIrgH~~ 192 (266)
+-.++..++.|+..+-.+|.-||+.
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCCC
Confidence 4578899999999999999999985
No 88
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.50 E-value=0.0044 Score=55.14 Aligned_cols=65 Identities=20% Similarity=0.252 Sum_probs=38.6
Q ss_pred CEEEEccCCCH----------------HHHHHHHHhcCCCCCceEEE-eCCcccCCCCc-----------HHHHHHHHHh
Q 024549 1 MIYDCDVHGQF----------------SDLLRLFEYGGYPPEANYLF-LGDYVDRGKQS-----------IETICLLLAY 52 (266)
Q Consensus 1 ii~IgDiHG~~----------------~~l~~~l~~~~~~~~~~~vf-LGD~vDrG~~s-----------~evl~~l~~l 52 (266)
|+.++|+||.+ ..+..+++...-...+.+++ .||+++..+.+ ..++..+-.+
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~~ 82 (277)
T cd07410 3 ILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNAL 82 (277)
T ss_pred EEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHhc
Confidence 46677999996 34666666654433344443 79999876522 2244444333
Q ss_pred hhhcCCcEEEEcCCcccc
Q 024549 53 KVKYKENFFLLRGNHECA 70 (266)
Q Consensus 53 k~~~p~~v~~lrGNHE~~ 70 (266)
. .. ++..||||.-
T Consensus 83 g----~d-~~~lGNHe~d 95 (277)
T cd07410 83 G----YD-AGTLGNHEFN 95 (277)
T ss_pred C----CC-EEeecccCcc
Confidence 2 23 4556999963
No 89
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.27 E-value=0.15 Score=48.61 Aligned_cols=206 Identities=18% Similarity=0.213 Sum_probs=102.6
Q ss_pred CEEEEccCC-C----HHHHHHHHHhcCCC----CCceE-EEeCCcccC-CCC-----c------HHHHHHHHHhhhhcCC
Q 024549 1 MIYDCDVHG-Q----FSDLLRLFEYGGYP----PEANY-LFLGDYVDR-GKQ-----S------IETICLLLAYKVKYKE 58 (266)
Q Consensus 1 ii~IgDiHG-~----~~~l~~~l~~~~~~----~~~~~-vfLGD~vDr-G~~-----s------~evl~~l~~lk~~~p~ 58 (266)
++.|+|+|= . -+.+..+++.++-+ +.-+| +..||.||. |-. . .+-...+..+-.+-|.
T Consensus 228 v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp~ 307 (481)
T COG1311 228 VALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVPE 307 (481)
T ss_pred EEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCCC
Confidence 357889995 2 23344444443332 22344 578999993 211 1 1222223222223344
Q ss_pred --cEEEEcCCccccchhhhcCChHHHHHhhchhhHhhhhhhhccCCeEEEEcC-cEEEecCCCCCCCCCHHHHhcccCCC
Q 024549 59 --NFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARPV 135 (266)
Q Consensus 59 --~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~-~~l~vHgGi~p~~~~l~~i~~i~r~~ 135 (266)
.|++.+||||..-....--...+. ...++...+-.|-.-|...-+++ .++..|| .+++++...-...
T Consensus 308 ~I~v~i~PGnhDa~r~a~PQp~~~~~----~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~~ 377 (481)
T COG1311 308 HIKVFIMPGNHDAVRQALPQPHFPEL----IKSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPGA 377 (481)
T ss_pred CceEEEecCCCCccccccCCCCcchh----hcccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCCC
Confidence 489999999986543221122211 12222222222333355444444 5888888 3667765543332
Q ss_pred CC--CCcchhhhhhhcCCCCCCCCCccC-CCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCC
Q 024549 136 DV--PDQGLLCDLLWADPDKDIEGWGEN-DRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAP 212 (266)
Q Consensus 136 ~~--~~~~~~~dllWsdp~~~~~~~~~~-~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~ 212 (266)
.. +...+.+-+.|..-.+...+..+- +-...+. ++++ --+.++.||++. .|+....+.+++..+|-+
T Consensus 378 ~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~kD~l----VIee-----vPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q 447 (481)
T COG1311 378 DYDSPLKAMEELLKRRHLAPTYGGTLPIAPETKDYL----VIEE-----VPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQ 447 (481)
T ss_pred CccchHHHHHHHHHhcccCCCCCCccccccCCcCce----eecc-----CCcEEEEccccc-cceeEEeccceEEeeeec
Confidence 21 112222334444322211111100 0001111 1121 357799999997 899988888899999988
Q ss_pred CCCCCCCCcEEEEEEcCC
Q 024549 213 NYCGEFDNAGAMMSVDDT 230 (266)
Q Consensus 213 ~y~~~~~n~ga~l~i~~~ 230 (266)
.+. ..+-++.|+..
T Consensus 448 ~qT----efqk~vni~p~ 461 (481)
T COG1311 448 EQT----EFQKMVNINPT 461 (481)
T ss_pred chh----ccceEEEecCc
Confidence 664 34556666554
No 90
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=96.26 E-value=0.069 Score=47.82 Aligned_cols=62 Identities=21% Similarity=0.204 Sum_probs=37.5
Q ss_pred HHHHHHHHhcCC--CCCceEEEeCCcccCCCCcH--H------HHHHHHHhhhhcC-CcEEEEcCCccccchh
Q 024549 12 SDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSI--E------TICLLLAYKVKYK-ENFFLLRGNHECASIN 73 (266)
Q Consensus 12 ~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~s~--e------vl~~l~~lk~~~p-~~v~~lrGNHE~~~~~ 73 (266)
..+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+| -.|+.+.||||....+
T Consensus 53 ~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 53 RLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 345555554433 35678889999998876531 1 1112223443333 4699999999986543
No 91
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.13 E-value=0.088 Score=42.51 Aligned_cols=115 Identities=23% Similarity=0.331 Sum_probs=76.0
Q ss_pred EEEEccCC--CHHHHHHHHHhcCCCCC-ceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCC
Q 024549 2 IYDCDVHG--QFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGF 78 (266)
Q Consensus 2 i~IgDiHG--~~~~l~~~l~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf 78 (266)
+++||+|= ...+|-.-|+++=.|.. ++++++|++. |.|+.++|..+ ...++++||--|.-
T Consensus 4 L~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l----~~dvhiVrGeFD~~-------- 66 (183)
T KOG3325|consen 4 LVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTL----SSDVHIVRGEFDEN-------- 66 (183)
T ss_pred EEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhh----CCCcEEEecccCcc--------
Confidence 57789884 23344444444435544 5788999976 78899998766 45899999977653
Q ss_pred hHHHHHhhchhhHhhhhhhhccCCeEEEEc---CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCC
Q 024549 79 YDECKRRFNVRVWKTFTDCFNCLPVAALVD---EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI 155 (266)
Q Consensus 79 ~~e~~~~~~~~~~~~~~~~~~~LPl~~~i~---~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~ 155 (266)
..-|...++. =++-|+||-.- +-|+||.
T Consensus 67 --------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~--- 97 (183)
T KOG3325|consen 67 --------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE--- 97 (183)
T ss_pred --------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH---
Confidence 1123332332 27889998321 2355553
Q ss_pred CCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEE
Q 024549 156 EGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEF 199 (266)
Q Consensus 156 ~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~ 199 (266)
++...-++.+++.++-||+..-+.|+.
T Consensus 98 -----------------sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 98 -----------------SLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred -----------------HHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 456666788999999999998777663
No 92
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.09 E-value=0.015 Score=49.21 Aligned_cols=65 Identities=18% Similarity=0.204 Sum_probs=39.3
Q ss_pred ccCCCHHHHHHHHHhcCC-CCCceEEEeCCcccCCCCcHH-HHHHHHHhhhhc---------------------CCcEEE
Q 024549 6 DVHGQFSDLLRLFEYGGY-PPEANYLFLGDYVDRGKQSIE-TICLLLAYKVKY---------------------KENFFL 62 (266)
Q Consensus 6 DiHG~~~~l~~~l~~~~~-~~~~~~vfLGD~vDrG~~s~e-vl~~l~~lk~~~---------------------p~~v~~ 62 (266)
|++|+=.-|.+.++.+.. -..+.++||||++|.|--+-+ --..+...+..+ ...++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 556655556666665433 345778899999998753322 223333332222 145789
Q ss_pred EcCCcccc
Q 024549 63 LRGNHECA 70 (266)
Q Consensus 63 lrGNHE~~ 70 (266)
|+||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999984
No 93
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=96.06 E-value=0.011 Score=52.04 Aligned_cols=65 Identities=20% Similarity=0.165 Sum_probs=39.8
Q ss_pred CEEEEccCCCH----------HHHHHHHHhcCCCCCceEEEeCCcccCCCCcH-----HHHHHHHHhhhhcCCcEEEEcC
Q 024549 1 MIYDCDVHGQF----------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI-----ETICLLLAYKVKYKENFFLLRG 65 (266)
Q Consensus 1 ii~IgDiHG~~----------~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~-----evl~~l~~lk~~~p~~v~~lrG 65 (266)
|+.+.|+||++ ..+..+++...-.+.+-++..||+++..+.+. .++..+-.+ +..+ ...|
T Consensus 3 il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~G 77 (257)
T cd07408 3 ILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTPG 77 (257)
T ss_pred EEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Eccc
Confidence 35677999974 45666666654334455677999998766432 233333222 3344 4569
Q ss_pred Ccccc
Q 024549 66 NHECA 70 (266)
Q Consensus 66 NHE~~ 70 (266)
|||.-
T Consensus 78 NHefd 82 (257)
T cd07408 78 NHEFD 82 (257)
T ss_pred ccccc
Confidence 99963
No 94
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.38 E-value=0.034 Score=49.94 Aligned_cols=65 Identities=25% Similarity=0.272 Sum_probs=40.4
Q ss_pred CEEEEccCCCHH--------------HHHHHHHhcCCC-CCceEEEeCCcccCCCC-c-----HHHHHHHHHhhhhcCCc
Q 024549 1 MIYDCDVHGQFS--------------DLLRLFEYGGYP-PEANYLFLGDYVDRGKQ-S-----IETICLLLAYKVKYKEN 59 (266)
Q Consensus 1 ii~IgDiHG~~~--------------~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~-s-----~evl~~l~~lk~~~p~~ 59 (266)
|+.+.|+||++. .+..+++..... +..-++..||+++..+. + ..++..+-++ +..
T Consensus 3 il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~----g~D 78 (288)
T cd07412 3 ILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAM----GVD 78 (288)
T ss_pred EEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhh----CCe
Confidence 456779999854 366667665443 33456679999987664 2 1344554444 224
Q ss_pred EEEEcCCcccc
Q 024549 60 FFLLRGNHECA 70 (266)
Q Consensus 60 v~~lrGNHE~~ 70 (266)
+ ...||||.-
T Consensus 79 a-~t~GNHefd 88 (288)
T cd07412 79 A-SAVGNHEFD 88 (288)
T ss_pred e-eeecccccc
Confidence 4 555999963
No 95
>PLN02533 probable purple acid phosphatase
Probab=95.29 E-value=0.026 Score=53.59 Aligned_cols=68 Identities=13% Similarity=0.053 Sum_probs=38.4
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcH--H-HHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI--E-TICLLLAYKVKYKENFFLLRGNHECAS 71 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~--e-vl~~l~~lk~~~p~~v~~lrGNHE~~~ 71 (266)
++++||+|-. ......++.+.....+-++++||+++-+.... + ...++..+.. .-.++.++||||...
T Consensus 142 f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s--~~P~m~~~GNHE~~~ 212 (427)
T PLN02533 142 FAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLAS--QRPWMVTHGNHELEK 212 (427)
T ss_pred EEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhh--cCceEEeCccccccc
Confidence 3678899632 22223444443345677889999997543321 1 1222222222 235889999999864
No 96
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.23 E-value=0.053 Score=47.18 Aligned_cols=67 Identities=19% Similarity=0.249 Sum_probs=39.7
Q ss_pred EEEEccCCCHHHHH----------------HHHH-hcCCCCCceEEEeCCcccCCCCc-----HHHHHHHHHhhhhcCCc
Q 024549 2 IYDCDVHGQFSDLL----------------RLFE-YGGYPPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKEN 59 (266)
Q Consensus 2 i~IgDiHG~~~~l~----------------~~l~-~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~ 59 (266)
++|+|+|=-++... +.+. .+.....+++|++||+-.-.+.+ .++-.++-.++ .. .
T Consensus 23 lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~-~~--e 99 (235)
T COG1407 23 LVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD-ER--E 99 (235)
T ss_pred EEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-cC--c
Confidence 68889996655433 2222 11223457899999998544432 33333332222 22 5
Q ss_pred EEEEcCCccccc
Q 024549 60 FFLLRGNHECAS 71 (266)
Q Consensus 60 v~~lrGNHE~~~ 71 (266)
+++++||||...
T Consensus 100 vi~i~GNHD~~i 111 (235)
T COG1407 100 VIIIRGNHDNGI 111 (235)
T ss_pred EEEEeccCCCcc
Confidence 999999999864
No 97
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=95.09 E-value=0.039 Score=48.77 Aligned_cols=63 Identities=19% Similarity=0.190 Sum_probs=36.7
Q ss_pred EEEEccCCCH----------------------HHHHHHHHhcCCC-CCceE-EEeCCcccCCCCcH-----HHHHHHHHh
Q 024549 2 IYDCDVHGQF----------------------SDLLRLFEYGGYP-PEANY-LFLGDYVDRGKQSI-----ETICLLLAY 52 (266)
Q Consensus 2 i~IgDiHG~~----------------------~~l~~~l~~~~~~-~~~~~-vfLGD~vDrG~~s~-----evl~~l~~l 52 (266)
+.+.|+||++ ..+..+++..... ..+.+ +..||+++..+.+. .++..+-.+
T Consensus 4 l~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~~ 83 (264)
T cd07411 4 LHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNAL 83 (264)
T ss_pred EEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHhh
Confidence 5667999974 3345556654433 33444 56999998876542 333333332
Q ss_pred hhhcCCcEEEEcCCcccc
Q 024549 53 KVKYKENFFLLRGNHECA 70 (266)
Q Consensus 53 k~~~p~~v~~lrGNHE~~ 70 (266)
+..+.. ||||.-
T Consensus 84 ----g~da~~--GNHefd 95 (264)
T cd07411 84 ----GVDAMV--GHWEFT 95 (264)
T ss_pred ----CCeEEe--cccccc
Confidence 333333 999964
No 98
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=95.04 E-value=1.4 Score=38.97 Aligned_cols=49 Identities=20% Similarity=0.298 Sum_probs=31.3
Q ss_pred CceEEeeeeeeccCeEEecC--CeEEEEecCCCCCCCCCCcEEEEEEc-CCCceEEE
Q 024549 183 LDLICRAHQVVEDGYEFFAK--RQLVTVFSAPNYCGEFDNAGAMMSVD-DTLTCSFQ 236 (266)
Q Consensus 183 ~~~iIrgH~~~~~G~~~~~~--~~~itifSa~~y~~~~~n~ga~l~i~-~~~~~~~~ 236 (266)
-+.++.||++. .|.+...+ ++-+.+.|.|.|. ..|.++.+| +++++...
T Consensus 204 PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs----~t~~~vlvdl~tLe~~~v 255 (257)
T cd07387 204 PHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFS----KTGTAVLVNLRTLECEPI 255 (257)
T ss_pred CCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcC----cCCEEEEEECCcCcEEEE
Confidence 46688999986 55555432 5667778889874 356566565 44555543
No 99
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.56 E-value=0.092 Score=46.34 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=19.5
Q ss_pred hHHHHHHHHCCCceEEeeeeeec
Q 024549 172 DKVVEFLQKHDLDLICRAHQVVE 194 (266)
Q Consensus 172 ~~~~~fl~~~~~~~iIrgH~~~~ 194 (266)
+.+.+++++.++++++.||....
T Consensus 191 ~~l~~l~~~~~v~~vl~GH~H~~ 213 (277)
T cd07378 191 DRLLPLLKKYKVDAYLSGHDHNL 213 (277)
T ss_pred HHHHHHHHHcCCCEEEeCCcccc
Confidence 45778889999999999998763
No 100
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=94.56 E-value=0.089 Score=47.00 Aligned_cols=65 Identities=17% Similarity=0.121 Sum_probs=37.6
Q ss_pred CEEEEccCCCH---------------------HHHHHHHHhcCCCCCc-eEEEeCCcccCCCCc-----HHHHHHHHHhh
Q 024549 1 MIYDCDVHGQF---------------------SDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQS-----IETICLLLAYK 53 (266)
Q Consensus 1 ii~IgDiHG~~---------------------~~l~~~l~~~~~~~~~-~~vfLGD~vDrG~~s-----~evl~~l~~lk 53 (266)
|+.+.|+||++ ..+..+++........ -++-.||+++..+.+ ..++..+-.+
T Consensus 3 il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~- 81 (281)
T cd07409 3 ILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL- 81 (281)
T ss_pred EEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc-
Confidence 35677999874 4455666655433333 344589999877643 2233333322
Q ss_pred hhcCCcEEEEcCCcccc
Q 024549 54 VKYKENFFLLRGNHECA 70 (266)
Q Consensus 54 ~~~p~~v~~lrGNHE~~ 70 (266)
...+.. .||||.-
T Consensus 82 ---g~D~~~-lGNHefd 94 (281)
T cd07409 82 ---GYDAMT-LGNHEFD 94 (281)
T ss_pred ---CCCEEE-ecccccc
Confidence 334444 5999974
No 101
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=94.52 E-value=0.083 Score=44.09 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=47.1
Q ss_pred CCCceEEEeCCcc--cCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChHHHHHhhchhhHhhhhhhhccC
Q 024549 24 PPEANYLFLGDYV--DRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCL 101 (266)
Q Consensus 24 ~~~~~~vfLGD~v--DrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~L 101 (266)
.++|.++.-||+- -|=++..+-+.++-+| |+.-+++|||||++.-. ...+...+... .-..++.|+.+
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s-----~skl~n~lp~~-l~~~n~~f~l~ 111 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSS-----ISKLNNALPPI-LFYLNNGFELL 111 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccch-----HHHHHhhcCch-HhhhccceeEe
Confidence 4566777899975 4556666667777665 88999999999997542 22333333322 33456667766
Q ss_pred CeEEEEc
Q 024549 102 PVAALVD 108 (266)
Q Consensus 102 Pl~~~i~ 108 (266)
-.+ +++
T Consensus 112 n~a-I~G 117 (230)
T COG1768 112 NYA-IVG 117 (230)
T ss_pred eEE-EEE
Confidence 643 555
No 102
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=93.75 E-value=0.11 Score=45.74 Aligned_cols=63 Identities=24% Similarity=0.121 Sum_probs=40.5
Q ss_pred EEEEccC----------CCHHHHHHHHHhcCCCCCc-eEEEeCCcccCCCCc-----HHHHHHHHHhhhhcCCcEEEEcC
Q 024549 2 IYDCDVH----------GQFSDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENFFLLRG 65 (266)
Q Consensus 2 i~IgDiH----------G~~~~l~~~l~~~~~~~~~-~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrG 65 (266)
+.+.|+| |.+..+..++++..-...+ -++..||+++..+.+ ..++..+-.+. --+...|
T Consensus 4 l~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~G 78 (257)
T cd07406 4 LHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFG 78 (257)
T ss_pred EEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeec
Confidence 4556888 3467777788776544334 566799999887532 34555554442 2356789
Q ss_pred Cccc
Q 024549 66 NHEC 69 (266)
Q Consensus 66 NHE~ 69 (266)
|||.
T Consensus 79 NHef 82 (257)
T cd07406 79 NHEF 82 (257)
T ss_pred cccc
Confidence 9997
No 103
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=93.67 E-value=0.14 Score=48.08 Aligned_cols=56 Identities=25% Similarity=0.400 Sum_probs=36.4
Q ss_pred HHHHHHhcCCC-CCceEEEeCCcccCCCCc--HHHHHHHHHhhhhcCC----cEEEEcCCccc
Q 024549 14 LLRLFEYGGYP-PEANYLFLGDYVDRGKQS--IETICLLLAYKVKYKE----NFFLLRGNHEC 69 (266)
Q Consensus 14 l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~----~v~~lrGNHE~ 69 (266)
|.+.+...-+. ..+-++||||++|-|... -|--.....++..++. .++.+.||||-
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 34444443332 345677899999988753 3444455555555554 58999999996
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.42 E-value=0.11 Score=55.48 Aligned_cols=64 Identities=17% Similarity=0.131 Sum_probs=39.2
Q ss_pred CEEEEccCCCH---HHHHHHHHhcCCCCCceEEE-eCCcccCCCCcH-----HHHHHHHHhhhhcCCcEEEEcCCccc
Q 024549 1 MIYDCDVHGQF---SDLLRLFEYGGYPPEANYLF-LGDYVDRGKQSI-----ETICLLLAYKVKYKENFFLLRGNHEC 69 (266)
Q Consensus 1 ii~IgDiHG~~---~~l~~~l~~~~~~~~~~~vf-LGD~vDrG~~s~-----evl~~l~~lk~~~p~~v~~lrGNHE~ 69 (266)
|+.+.|+||.+ ..+..+++...-...+.+++ .||++++.+.+. .++..+-++. --....||||.
T Consensus 663 Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 663 ILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 35677999875 45555565543333344444 899999876542 3444443332 22568999997
No 105
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=93.15 E-value=0.015 Score=54.96 Aligned_cols=208 Identities=12% Similarity=-0.022 Sum_probs=123.4
Q ss_pred EEEEccCCCHHHHHHHHHhcCCCCCc-eEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549 2 IYDCDVHGQFSDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD 80 (266)
Q Consensus 2 i~IgDiHG~~~~l~~~l~~~~~~~~~-~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~ 80 (266)
+.+.|.||.+.|+.++++.- |... -|++-|++++++....+.+..+...+...|....+.|++||.-.+-..++|..
T Consensus 49 lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ 126 (476)
T KOG0376|consen 49 LKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEK 126 (476)
T ss_pred eeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhh
Confidence 56789999999999998863 3333 48999999999999999999999999999999999999999988777777766
Q ss_pred HHHHhhch---hhHhhhhhhhccCCeEEEEcCcEEEecCCCCC------------------CC--CCHHHH----hcccC
Q 024549 81 ECKRRFNV---RVWKTFTDCFNCLPVAALVDEKILCMHGGLSP------------------DL--KNLDQI----RNIAR 133 (266)
Q Consensus 81 e~~~~~~~---~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p------------------~~--~~l~~i----~~i~r 133 (266)
+....++. .+...+...... |+.....+ .++-+.-+.- .. .-+++. +.+..
T Consensus 127 ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g-~~le~~kvt~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~ 204 (476)
T KOG0376|consen 127 AILTPEGDKKSVVEMKIDEEDMD-LIESDYSG-PVLEDHKVTLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPS 204 (476)
T ss_pred cccCCccCCcccccccccccccc-ccccccCC-cccccchhhHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCc
Confidence 65554421 111111111111 12222221 1111110000 00 001111 11111
Q ss_pred CCCCCCcchhhhhhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeee------------ccCeEEec
Q 024549 134 PVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVV------------EDGYEFFA 201 (266)
Q Consensus 134 ~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~------------~~G~~~~~ 201 (266)
+++.. .-.+..|+.+......+....++.+..-++..+..|+...+..-+++.+.-+ ..+|...+
T Consensus 205 ~ve~~---~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rg 281 (476)
T KOG0376|consen 205 LVEIS---VPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRG 281 (476)
T ss_pred ceEee---cCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccC
Confidence 11111 3356777777654444555556655566677777777777777777777532 22222222
Q ss_pred C---CeEEEEecCCCCCC
Q 024549 202 K---RQLVTVFSAPNYCG 216 (266)
Q Consensus 202 ~---~~~itifSa~~y~~ 216 (266)
+ +.++++|+.+.++.
T Consensus 282 n~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 282 NHESDNMNKIYGFEGEVK 299 (476)
T ss_pred CccchHHHHHhCCCcchh
Confidence 1 24788899888764
No 106
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=92.24 E-value=0.18 Score=45.15 Aligned_cols=65 Identities=20% Similarity=0.079 Sum_probs=35.2
Q ss_pred CEEEEccCCCHHH----------HHHHHHhcCC-----CCCceEEEeCCcccCCCCc-----HHHHHHHHHhhhhcCCcE
Q 024549 1 MIYDCDVHGQFSD----------LLRLFEYGGY-----PPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENF 60 (266)
Q Consensus 1 ii~IgDiHG~~~~----------l~~~l~~~~~-----~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v 60 (266)
|+.+.|+||++.. +..+++.... .+..-++-.||.+...+.+ ..++.++-++ ...+
T Consensus 3 Il~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~----g~Da 78 (285)
T cd07405 3 ILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLV----GYDA 78 (285)
T ss_pred EEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhh----CCcE
Confidence 4567799998533 4455544322 2333455699998543422 2233333333 3344
Q ss_pred EEEcCCcccc
Q 024549 61 FLLRGNHECA 70 (266)
Q Consensus 61 ~~lrGNHE~~ 70 (266)
..+ ||||.-
T Consensus 79 ~~~-GNHEfD 87 (285)
T cd07405 79 MAV-GNHEFD 87 (285)
T ss_pred Eee-cccccc
Confidence 444 999963
No 107
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=90.24 E-value=0.44 Score=40.25 Aligned_cols=72 Identities=13% Similarity=0.152 Sum_probs=40.0
Q ss_pred CEEEEccCCC-----HHHHHHHHHhcC-CCCCceEEEeCCcccCCCCcHH----------HHHHHHHhhhh-----cCCc
Q 024549 1 MIYDCDVHGQ-----FSDLLRLFEYGG-YPPEANYLFLGDYVDRGKQSIE----------TICLLLAYKVK-----YKEN 59 (266)
Q Consensus 1 ii~IgDiHG~-----~~~l~~~l~~~~-~~~~~~~vfLGD~vDrG~~s~e----------vl~~l~~lk~~-----~p~~ 59 (266)
|++++|+|=. ++.|.++|+... -...+.+|++|+++|.-....+ ....+..+... .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 3566677755 667788888776 5556789999999996322211 11111111111 2357
Q ss_pred EEEEcCCccccch
Q 024549 60 FFLLRGNHECASI 72 (266)
Q Consensus 60 v~~lrGNHE~~~~ 72 (266)
|++++|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997654
No 108
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=89.65 E-value=0.43 Score=46.41 Aligned_cols=64 Identities=23% Similarity=0.218 Sum_probs=38.1
Q ss_pred EEEEccCCCHH---------------HHHHHHHhcCCCCCc-eEEEeCCcccCCCC------cHHHHHHHHHhhhhcCCc
Q 024549 2 IYDCDVHGQFS---------------DLLRLFEYGGYPPEA-NYLFLGDYVDRGKQ------SIETICLLLAYKVKYKEN 59 (266)
Q Consensus 2 i~IgDiHG~~~---------------~l~~~l~~~~~~~~~-~~vfLGD~vDrG~~------s~evl~~l~~lk~~~p~~ 59 (266)
+.+.|+||++. ....++++..-.... .+|=.||++++.+- ...++.++-.|+ -
T Consensus 30 lhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-----y 104 (517)
T COG0737 30 LHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-----Y 104 (517)
T ss_pred EEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC-----C
Confidence 45569999998 333334433322223 34459999998443 233555555553 2
Q ss_pred EEEEcCCcccc
Q 024549 60 FFLLRGNHECA 70 (266)
Q Consensus 60 v~~lrGNHE~~ 70 (266)
=..-.||||.-
T Consensus 105 Da~tiGNHEFd 115 (517)
T COG0737 105 DAMTLGNHEFD 115 (517)
T ss_pred cEEeecccccc
Confidence 25778999984
No 109
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=89.38 E-value=0.6 Score=42.50 Aligned_cols=64 Identities=20% Similarity=0.098 Sum_probs=37.9
Q ss_pred CEEEEccCCCHH------HHHHHHHhcCC-----CCCceEEEeCCcccCCCC-------------cHHHHHHHHHhhhhc
Q 024549 1 MIYDCDVHGQFS------DLLRLFEYGGY-----PPEANYLFLGDYVDRGKQ-------------SIETICLLLAYKVKY 56 (266)
Q Consensus 1 ii~IgDiHG~~~------~l~~~l~~~~~-----~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~lk~~~ 56 (266)
|+.+.|+||++. .+..+++...- .+..-++..||.+..++. ...++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g--- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG--- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC---
Confidence 355669999953 44444554322 233456679999976553 233444544443
Q ss_pred CCcEEEEcCCccc
Q 024549 57 KENFFLLRGNHEC 69 (266)
Q Consensus 57 p~~v~~lrGNHE~ 69 (266)
-=....||||.
T Consensus 80 --~Da~tlGNHEF 90 (313)
T cd08162 80 --VQAIALGNHEF 90 (313)
T ss_pred --CcEEecccccc
Confidence 22467899996
No 110
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=89.35 E-value=0.43 Score=45.29 Aligned_cols=42 Identities=24% Similarity=0.361 Sum_probs=34.2
Q ss_pred CceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccch
Q 024549 26 EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI 72 (266)
Q Consensus 26 ~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 72 (266)
.+++=.+||+.||||++-.+++-|... + .+-+-.||||-..+
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~y----h-svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINY----H-SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhc----c-cccccccCcceEEe
Confidence 356778999999999999999988644 3 67788999997544
No 111
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=89.01 E-value=0.54 Score=42.14 Aligned_cols=38 Identities=24% Similarity=0.079 Sum_probs=22.9
Q ss_pred eEEEeCCcccCCCCcH-------HHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 28 NYLFLGDYVDRGKQSI-------ETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 28 ~~vfLGD~vDrG~~s~-------evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
-++..||.++.-+.+- -++.++-.+ + --....||||.-
T Consensus 53 Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m----g-yDa~tlGNHEFd 97 (282)
T cd07407 53 LLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM----P-YDLLTIGNHELY 97 (282)
T ss_pred EEEeCCCccCCeeceeeecCCChHHHHHHHhc----C-CcEEeecccccC
Confidence 4556999998654332 233343333 2 335788999994
No 112
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=88.80 E-value=1.1 Score=41.15 Aligned_cols=49 Identities=18% Similarity=0.181 Sum_probs=30.9
Q ss_pred CCCCceEEEeCCcccCCCCcHH---HHHHHHHhhhhcCCcEEEEcCCccccch
Q 024549 23 YPPEANYLFLGDYVDRGKQSIE---TICLLLAYKVKYKENFFLLRGNHECASI 72 (266)
Q Consensus 23 ~~~~~~~vfLGD~vDrG~~s~e---vl~~l~~lk~~~p~~v~~lrGNHE~~~~ 72 (266)
....|.+||+||.|+. ..... .+....+=.+.+.=....+.||||....
T Consensus 98 sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 98 SEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred ccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 3456789999999986 33333 3333333333344457789999998643
No 113
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=87.49 E-value=0.74 Score=45.96 Aligned_cols=64 Identities=16% Similarity=0.088 Sum_probs=37.7
Q ss_pred CEEEEccCCCHH----------------HHHHHHHhcCCC-CCceEEEeCCcccCCCCcH-------------HHHHHHH
Q 024549 1 MIYDCDVHGQFS----------------DLLRLFEYGGYP-PEANYLFLGDYVDRGKQSI-------------ETICLLL 50 (266)
Q Consensus 1 ii~IgDiHG~~~----------------~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~-------------evl~~l~ 50 (266)
|+.+.|+||++. .+..+++...-. ++..+|-.||.+...|.+- -++.++-
T Consensus 5 Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~mN 84 (626)
T TIGR01390 5 IVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAMN 84 (626)
T ss_pred EEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHHh
Confidence 356669999964 344455544322 3344566999998665431 2334443
Q ss_pred HhhhhcCCcEEEEcCCccc
Q 024549 51 AYKVKYKENFFLLRGNHEC 69 (266)
Q Consensus 51 ~lk~~~p~~v~~lrGNHE~ 69 (266)
.|. --....||||.
T Consensus 85 ~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 85 LLK-----YDVGNLGNHEF 98 (626)
T ss_pred hcC-----ccEEecccccc
Confidence 332 23477899996
No 114
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=86.93 E-value=0.85 Score=45.74 Aligned_cols=63 Identities=14% Similarity=0.071 Sum_probs=38.2
Q ss_pred EEEEccCCCHH----------------HHHHHHHhcCCC-CCceEEEeCCcccCCCCcH-------------HHHHHHHH
Q 024549 2 IYDCDVHGQFS----------------DLLRLFEYGGYP-PEANYLFLGDYVDRGKQSI-------------ETICLLLA 51 (266)
Q Consensus 2 i~IgDiHG~~~----------------~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~-------------evl~~l~~ 51 (266)
+...|+||++. .+..+++.+.-. ++..+|-.||.+...|.+- -++..+-.
T Consensus 29 L~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~amN~ 108 (649)
T PRK09420 29 METTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKAMNT 108 (649)
T ss_pred EEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHHHHh
Confidence 45669999864 344455544322 3445667999998766431 24444444
Q ss_pred hhhhcCCcEEEEcCCccc
Q 024549 52 YKVKYKENFFLLRGNHEC 69 (266)
Q Consensus 52 lk~~~p~~v~~lrGNHE~ 69 (266)
|. --....||||.
T Consensus 109 lg-----yDa~tlGNHEF 121 (649)
T PRK09420 109 LD-----YDVGNLGNHEF 121 (649)
T ss_pred cC-----CcEEeccchhh
Confidence 42 23578899996
No 115
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=86.58 E-value=0.86 Score=48.76 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=16.4
Q ss_pred hhHHHHHHHH-CCCceEEeeeeee
Q 024549 171 ADKVVEFLQK-HDLDLICRAHQVV 193 (266)
Q Consensus 171 ~~~~~~fl~~-~~~~~iIrgH~~~ 193 (266)
+.++.+..++ .+++.||-||+..
T Consensus 256 en~~~~la~~~~gID~Il~GHsH~ 279 (1163)
T PRK09419 256 EDSVYDLAEKTKGIDAIVAGHQHG 279 (1163)
T ss_pred chHHHHHHHhCCCCcEEEeCCCcc
Confidence 3445566644 4899999999865
No 116
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=85.93 E-value=0.92 Score=44.48 Aligned_cols=64 Identities=20% Similarity=0.070 Sum_probs=34.8
Q ss_pred EEEEccCCCHH----------HHHHHHHhcCC-----CCCceEEEeCCcccCCCCc-----HHHHHHHHHhhhhcCCcEE
Q 024549 2 IYDCDVHGQFS----------DLLRLFEYGGY-----PPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENFF 61 (266)
Q Consensus 2 i~IgDiHG~~~----------~l~~~l~~~~~-----~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~ 61 (266)
+.+.|+||++. .+..+++.... .+..-++.-||.+...+.+ .-++.++-++ +..+.
T Consensus 38 l~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~----g~Da~ 113 (551)
T PRK09558 38 LHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLI----GYDAM 113 (551)
T ss_pred EEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcC----CCCEE
Confidence 55669999874 23344443321 2344566799998644322 1223333333 33454
Q ss_pred EEcCCcccc
Q 024549 62 LLRGNHECA 70 (266)
Q Consensus 62 ~lrGNHE~~ 70 (266)
. .||||.-
T Consensus 114 t-lGNHEFD 121 (551)
T PRK09558 114 A-VGNHEFD 121 (551)
T ss_pred c-ccccccC
Confidence 4 4999963
No 117
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=85.42 E-value=9.3 Score=32.19 Aligned_cols=85 Identities=16% Similarity=0.263 Sum_probs=65.8
Q ss_pred ceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh----------------HHHHHhhchhh
Q 024549 27 ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY----------------DECKRRFNVRV 90 (266)
Q Consensus 27 ~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 90 (266)
..+||+|- |-+.-|++.++-+|+..+.++-+. .|+-|.|..++...|. .|..+.|-...
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 46889984 888999999999999888877555 8999999887544432 34444455567
Q ss_pred HhhhhhhhccCCeEEEEcCcEEEecC
Q 024549 91 WKTFTDCFNCLPVAALVDEKILCMHG 116 (266)
Q Consensus 91 ~~~~~~~~~~LPl~~~i~~~~l~vHg 116 (266)
|..+...+.++++...+...++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 88888888888888887778888877
No 118
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=84.78 E-value=2.1 Score=38.07 Aligned_cols=65 Identities=15% Similarity=0.137 Sum_probs=45.6
Q ss_pred CEEEEccCCC--HHHHHHHHHhcCCCC-CceEEEeCCcccCC-CCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 1 MIYDCDVHGQ--FSDLLRLFEYGGYPP-EANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 1 ii~IgDiHG~--~~~l~~~l~~~~~~~-~~~~vfLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
|++||||=|. ...+...|..+.... .+-+|..||....| --+.++...|..+ .-.++.+ |||+.-
T Consensus 3 ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~D 71 (266)
T TIGR00282 3 FLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWF 71 (266)
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhcc
Confidence 4789999999 566777777765443 34555689998766 3467777777644 4466666 999984
No 119
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=84.35 E-value=0.073 Score=49.40 Aligned_cols=192 Identities=13% Similarity=-0.086 Sum_probs=109.6
Q ss_pred eEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChHHHHHhh--c--hhhHhhhhhhhccCCe
Q 024549 28 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRF--N--VRVWKTFTDCFNCLPV 103 (266)
Q Consensus 28 ~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~--~--~~~~~~~~~~~~~LPl 103 (266)
..|+++++.+++.+.++.+.+-+..+..+..+-...++||+... .+++++.-.- + ..+++..++-++..+.
T Consensus 50 atVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~-----~~R~~LVlp~l~S~riyvid~~~ep~~~~l~ 124 (476)
T KOG0918|consen 50 ATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSS-----FKRRYLVLPSLNSGRIYVIDVKTEPRKPSLE 124 (476)
T ss_pred eEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcc-----hhhhheeecccccCceEEEEeccCcCcccee
Confidence 57899999999999999998888888888888889999996543 2222222111 1 2345666777788888
Q ss_pred EEEEcCcEEEecCCCCCCCCCHHHHhcccCCC--CCCCcc-hhhhhhhcCCCCCCCCCccCCCCceeecChh--HHHHHH
Q 024549 104 AALVDEKILCMHGGLSPDLKNLDQIRNIARPV--DVPDQG-LLCDLLWADPDKDIEGWGENDRGVSYTFGAD--KVVEFL 178 (266)
Q Consensus 104 ~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~--~~~~~~-~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~--~~~~fl 178 (266)
..+.+ ++++.|++..|.......+..+.-.. +...++ .-..++=++-.. ...|... +....||.+ ..-++.
T Consensus 125 k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg~f~llD~~~~~-k~tw~~~--~~~p~~gyDfwyqpr~~ 200 (476)
T KOG0918|consen 125 KTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKGGFLLLDSDFNE-KGTWEKP--GHSPLFGYDFWYQPRHN 200 (476)
T ss_pred eeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcCCeEEecCccce-ecccccC--CCccccccceeeccccc
Confidence 76655 99999999999764433332111000 000000 011111111100 1111111 112222222 223344
Q ss_pred HHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCC
Q 024549 179 QKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDT 230 (266)
Q Consensus 179 ~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~ 230 (266)
.....+...+.|.....+...+.++ ++.++.+-|.-...+.++.|.++.+
T Consensus 201 ~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 201 VMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred eEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 4455666667776543444444444 7777777777667788888888775
No 120
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=83.22 E-value=5.8 Score=38.63 Aligned_cols=43 Identities=21% Similarity=0.204 Sum_probs=34.0
Q ss_pred CHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHh
Q 024549 10 QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAY 52 (266)
Q Consensus 10 ~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l 52 (266)
.+..|..+|+.+.-...+.++.=||++.-...|..+|...+.|
T Consensus 37 Sf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 37 SFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred hHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 3678999999887777788889999999888888776655444
No 121
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=83.03 E-value=1.9 Score=44.32 Aligned_cols=64 Identities=20% Similarity=0.136 Sum_probs=37.5
Q ss_pred CEEEEccCCCHH----------------HHHHHHHhcCCC-CCceEEEeCCcccCCCCcH--------------HHHHHH
Q 024549 1 MIYDCDVHGQFS----------------DLLRLFEYGGYP-PEANYLFLGDYVDRGKQSI--------------ETICLL 49 (266)
Q Consensus 1 ii~IgDiHG~~~----------------~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~--------------evl~~l 49 (266)
|+.+.|+||++. .+..+++...-. ++.-+|-.||++..-|.+- -++..+
T Consensus 118 IL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~am 197 (814)
T PRK11907 118 ILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYAAL 197 (814)
T ss_pred EEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHHHH
Confidence 356679999954 233344443322 3345667999998655321 244444
Q ss_pred HHhhhhcCCcEEEEcCCccc
Q 024549 50 LAYKVKYKENFFLLRGNHEC 69 (266)
Q Consensus 50 ~~lk~~~p~~v~~lrGNHE~ 69 (266)
-.|. --....||||.
T Consensus 198 N~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 198 EALG-----FDAGTLGNHEF 212 (814)
T ss_pred hccC-----CCEEEechhhc
Confidence 4442 23577899996
No 122
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=83.00 E-value=1.7 Score=42.62 Aligned_cols=65 Identities=23% Similarity=0.098 Sum_probs=37.5
Q ss_pred CEEEEccCCCHHH---------------------HHHHHHhcCC-CCCceEEEeCCcccCCCCc-----HHHHHHHHHhh
Q 024549 1 MIYDCDVHGQFSD---------------------LLRLFEYGGY-PPEANYLFLGDYVDRGKQS-----IETICLLLAYK 53 (266)
Q Consensus 1 ii~IgDiHG~~~~---------------------l~~~l~~~~~-~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk 53 (266)
|+.+.|+||++.. +..+++...- .++.-++..||.+...+.+ ..++.++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 3566699998643 3334444322 2344566799999766533 22334433332
Q ss_pred hhcCCcEEEEcCCcccc
Q 024549 54 VKYKENFFLLRGNHECA 70 (266)
Q Consensus 54 ~~~p~~v~~lrGNHE~~ 70 (266)
--....||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 346788999963
No 123
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=81.96 E-value=3.7 Score=36.25 Aligned_cols=65 Identities=14% Similarity=0.098 Sum_probs=43.0
Q ss_pred CEEEEccCCCHH--HHHHHHHhcCCCC-CceEEEeCCcccCC-CCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 1 MIYDCDVHGQFS--DLLRLFEYGGYPP-EANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 1 ii~IgDiHG~~~--~l~~~l~~~~~~~-~~~~vfLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
|++||||=|... .+...|..+.... .+-+|-.||-.--| .-+.++...|..+ +-.+..+ ||||.-
T Consensus 2 ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~----G~D~iTl-GNH~fD 70 (255)
T cd07382 2 ILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSA----GVDVITM-GNHTWD 70 (255)
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhc----CCCEEEe-cccccC
Confidence 578999999865 4456666554332 34455589988666 3567777777655 3456556 999864
No 124
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=81.51 E-value=3.3 Score=38.30 Aligned_cols=67 Identities=24% Similarity=0.360 Sum_probs=41.1
Q ss_pred EccCCCHHHHH---HHHHhcCCCCCceEEEeCCccc-CCC---CcHHH---------HHHHHHhhhhcCCcEEEEcCCcc
Q 024549 5 CDVHGQFSDLL---RLFEYGGYPPEANYLFLGDYVD-RGK---QSIET---------ICLLLAYKVKYKENFFLLRGNHE 68 (266)
Q Consensus 5 gDiHG~~~~l~---~~l~~~~~~~~~~~vfLGD~vD-rG~---~s~ev---------l~~l~~lk~~~p~~v~~lrGNHE 68 (266)
|=-||.++.+- ...++.|-.+.|.++++||+=- |.. +++.| +.--+.=....|---++|-||||
T Consensus 7 GCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFIGGNHE 86 (456)
T KOG2863|consen 7 GCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIGGNHE 86 (456)
T ss_pred cccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEecCchH
Confidence 36799999887 4555666667888999999752 211 11111 11111112335656788999999
Q ss_pred ccc
Q 024549 69 CAS 71 (266)
Q Consensus 69 ~~~ 71 (266)
.+.
T Consensus 87 Asn 89 (456)
T KOG2863|consen 87 ASN 89 (456)
T ss_pred HHH
Confidence 864
No 125
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=75.20 E-value=4.3 Score=41.64 Aligned_cols=17 Identities=24% Similarity=0.331 Sum_probs=13.2
Q ss_pred HHHC-CCceEEeeeeeec
Q 024549 178 LQKH-DLDLICRAHQVVE 194 (266)
Q Consensus 178 l~~~-~~~~iIrgH~~~~ 194 (266)
|++. +++.||-||+...
T Consensus 272 l~~v~gID~IlgGHsH~~ 289 (780)
T PRK09418 272 LTEVPGVDAVLMGHSHTE 289 (780)
T ss_pred HhcCCCCCEEEECCCCCc
Confidence 4443 8999999999864
No 126
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=74.13 E-value=7.8 Score=37.02 Aligned_cols=66 Identities=20% Similarity=0.273 Sum_probs=49.9
Q ss_pred CEEEEccCCCHHHHHHHHHhcCCC--CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCc
Q 024549 1 MIYDCDVHGQFSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNH 67 (266)
Q Consensus 1 ii~IgDiHG~~~~l~~~l~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 67 (266)
|+++||+-|.++.|.+-++..... |-+-++++|++++-..++.|++.+...-+ ..|-.++++-+|-
T Consensus 8 ILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 8 ILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred EEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 568889999999988777765443 35778899999998778888877765443 4577788887765
No 127
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=70.91 E-value=16 Score=32.88 Aligned_cols=70 Identities=17% Similarity=0.258 Sum_probs=43.7
Q ss_pred EEEEccCCC----HHHHHHHHHhcC-CCC----CceEEEeCCcccCC----CCcH----HHHHHHHHh-hhhc-----CC
Q 024549 2 IYDCDVHGQ----FSDLLRLFEYGG-YPP----EANYLFLGDYVDRG----KQSI----ETICLLLAY-KVKY-----KE 58 (266)
Q Consensus 2 i~IgDiHG~----~~~l~~~l~~~~-~~~----~~~~vfLGD~vDrG----~~s~----evl~~l~~l-k~~~-----p~ 58 (266)
|++||+|=+ +++|.++|+... ..+ ..-+||+|+++-+. ..+. +-++-|..+ ...+ ..
T Consensus 31 VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~~~s 110 (291)
T PTZ00235 31 IIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLILEHC 110 (291)
T ss_pred EEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHHhcC
Confidence 556799854 778888888762 212 34689999998663 2222 233334332 2223 36
Q ss_pred cEEEEcCCccccc
Q 024549 59 NFFLLRGNHECAS 71 (266)
Q Consensus 59 ~v~~lrGNHE~~~ 71 (266)
++++++|-.|-..
T Consensus 111 ~fVFVPGpnDPw~ 123 (291)
T PTZ00235 111 YLIFIPGINDPCA 123 (291)
T ss_pred eEEEECCCCCCCc
Confidence 8999999999743
No 128
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=67.68 E-value=11 Score=35.53 Aligned_cols=46 Identities=11% Similarity=0.138 Sum_probs=29.4
Q ss_pred CCceEEEeCCcccCCCCcHH------HHHHHHHhhh-hcCCcEEEEcCCcccc
Q 024549 25 PEANYLFLGDYVDRGKQSIE------TICLLLAYKV-KYKENFFLLRGNHECA 70 (266)
Q Consensus 25 ~~~~~vfLGD~vDrG~~s~e------vl~~l~~lk~-~~p~~v~~lrGNHE~~ 70 (266)
+.+-+|-+||-++.|..++. .++-++.-+. ...-..+++.||||.+
T Consensus 57 ~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNHDy~ 109 (394)
T PTZ00422 57 RVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQADWD 109 (394)
T ss_pred CCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCccccc
Confidence 44567779998888877543 3444442211 0123689999999984
No 129
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=66.00 E-value=8.1 Score=34.52 Aligned_cols=62 Identities=23% Similarity=0.242 Sum_probs=38.2
Q ss_pred EEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcC-CcEEEEcCCccccc
Q 024549 2 IYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYK-ENFFLLRGNHECAS 71 (266)
Q Consensus 2 i~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p-~~v~~lrGNHE~~~ 71 (266)
|.|+|.|+...+.. ..++.|-++.+||+-.-|- +-||..+=-.+-. .| ..-+.|+||||.-.
T Consensus 65 VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gs-lph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 65 VCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGS-LPHEYKIVIAGNHELTF 127 (305)
T ss_pred EEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhcc-CcceeeEEEeeccceee
Confidence 45669998655543 3566777889999987554 3444433221111 12 24578999999854
No 130
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=51.79 E-value=39 Score=24.21 Aligned_cols=65 Identities=14% Similarity=0.018 Sum_probs=40.5
Q ss_pred EEEccCCCHHHHHHHHHhcCC--CCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCc
Q 024549 3 YDCDVHGQFSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNH 67 (266)
Q Consensus 3 ~IgDiHG~~~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 67 (266)
+|-|---+.+.+.++++.+.- +....++.+|+.-|.|..+.+....+-.+...+...+++...|+
T Consensus 16 vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 16 VIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred EEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 455766777888887776532 34556778999999888877755555555555555655555443
No 131
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=49.25 E-value=1.1e+02 Score=24.90 Aligned_cols=102 Identities=15% Similarity=0.200 Sum_probs=60.5
Q ss_pred EEEEccCCCHHHHHHHHHh-cCC------------CCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcc
Q 024549 2 IYDCDVHGQFSDLLRLFEY-GGY------------PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHE 68 (266)
Q Consensus 2 i~IgDiHG~~~~l~~~l~~-~~~------------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 68 (266)
|+.+=.+||-..+.+.+.. ++- ...-.+||+|=-+|+|.-+-++..+|-.|+ +.+|++.-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF~---- 74 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALFG---- 74 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEEE----
Confidence 5555678888887665543 222 123479999999999999999999988774 45654431
Q ss_pred ccchhhhcCChHHHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCC
Q 024549 69 CASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDL 122 (266)
Q Consensus 69 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~ 122 (266)
..|+.. ...|...+.+....++..= ..+- +.|+|+|-++|.+
T Consensus 75 ------T~G~~~--~s~~~~~~~~~~~~~~~~~---~~~l-g~f~CqGk~~~~~ 116 (160)
T PF12641_consen 75 ------TAGAGP--DSEYAKKILKNVEALLPKG---NEIL-GTFMCQGKMDPKV 116 (160)
T ss_pred ------ecCCCC--chHHHHHHHHHHHHhhccC---Ceec-ceEEeCCcCCHHH
Confidence 222221 1122223333334443332 2222 4777889888754
No 132
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=40.30 E-value=20 Score=35.61 Aligned_cols=40 Identities=25% Similarity=0.416 Sum_probs=33.9
Q ss_pred eEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccch
Q 024549 28 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI 72 (266)
Q Consensus 28 ~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 72 (266)
++-.+||+.||||.+-.+++.|+.. + +|-+-.||||-..+
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~----h-svDIQWGNHDIlWM 226 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNY----H-SVDIQWGNHDILWM 226 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcC----C-CccccccchHHHHH
Confidence 5668999999999999999999744 2 78899999997443
No 133
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=38.02 E-value=41 Score=29.51 Aligned_cols=87 Identities=25% Similarity=0.334 Sum_probs=46.0
Q ss_pred ceEEEeCCcc-cCCCC---cHHHHHHHHHhhhh-------cCCcEEEEcCCccccchhhhcCChHHHH-Hhh-chhhHhh
Q 024549 27 ANYLFLGDYV-DRGKQ---SIETICLLLAYKVK-------YKENFFLLRGNHECASINRIYGFYDECK-RRF-NVRVWKT 93 (266)
Q Consensus 27 ~~~vfLGD~v-DrG~~---s~evl~~l~~lk~~-------~p~~v~~lrGNHE~~~~~~~~gf~~e~~-~~~-~~~~~~~ 93 (266)
+-.+||||-. ||=.. ..-++.+|-++.-. -..+|++|.||||.-. +..|.. .+. .+. ..+.|
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~-ngny~a--rlanhkls~gDTY-- 160 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNYMA--RLANHKLSAGDTY-- 160 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceecc-CchHHH--HHhhCCCCccchh--
Confidence 4578899865 33221 12345555444431 3468999999999753 222211 110 111 11222
Q ss_pred hhhhhccCCeEEEEc-CcEEEecCCCCC
Q 024549 94 FTDCFNCLPVAALVD-EKILCMHGGLSP 120 (266)
Q Consensus 94 ~~~~~~~LPl~~~i~-~~~l~vHgGi~p 120 (266)
..+..+|.+-.-. .+++..|-||-.
T Consensus 161 --nlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 161 --NLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred --hccccccccccCcchhhhhcccCcee
Confidence 3456777764433 268888888854
No 134
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=33.88 E-value=17 Score=28.85 Aligned_cols=21 Identities=29% Similarity=0.463 Sum_probs=19.1
Q ss_pred ccCCCHHHHHHHHHhcCCCCC
Q 024549 6 DVHGQFSDLLRLFEYGGYPPE 26 (266)
Q Consensus 6 DiHG~~~~l~~~l~~~~~~~~ 26 (266)
||.|++..|++.|+.+++|..
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~ 21 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDE 21 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCc
Confidence 899999999999999999843
No 135
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=33.66 E-value=53 Score=29.20 Aligned_cols=39 Identities=28% Similarity=0.474 Sum_probs=25.1
Q ss_pred eEEEeCCcccCCCCcHHHH-HHHHHhhhhcCCcEEEEcCCcccc
Q 024549 28 NYLFLGDYVDRGKQSIETI-CLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 28 ~~vfLGD~vDrG~~s~evl-~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
+++|+||+|.+ ...+++ ..|-.+|.+++.. ++-.|=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D--~vIaNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQAD--LVIANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCC--EEEEcCccc
Confidence 58999999944 334433 4556777777655 444566665
No 136
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=29.62 E-value=1.2e+02 Score=26.13 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=26.5
Q ss_pred HHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCC
Q 024549 177 FLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNY 214 (266)
Q Consensus 177 fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y 214 (266)
.+-..|+++||-||..+..+++.. ++++| +||-=|+
T Consensus 200 ~l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNf 235 (239)
T smart00854 200 ALIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNF 235 (239)
T ss_pred HHHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEccccc
Confidence 333369999999999999999876 45554 6665554
No 137
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=29.54 E-value=1.8e+02 Score=21.76 Aligned_cols=23 Identities=30% Similarity=0.668 Sum_probs=13.6
Q ss_pred HHHHHHHHHhcCCCCCceEEEeCCc
Q 024549 11 FSDLLRLFEYGGYPPEANYLFLGDY 35 (266)
Q Consensus 11 ~~~l~~~l~~~~~~~~~~~vfLGD~ 35 (266)
+.-|.+.++..++|... ++|-|+
T Consensus 13 y~~l~~Fl~~~~~P~G~--~~Lr~~ 35 (100)
T PF09949_consen 13 YPFLRDFLRRNGFPAGP--LLLRDY 35 (100)
T ss_pred HHHHHHHHHhcCCCCCc--eEcccC
Confidence 34456667777776654 455555
No 138
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=29.54 E-value=2e+02 Score=27.35 Aligned_cols=61 Identities=11% Similarity=0.038 Sum_probs=40.2
Q ss_pred EEcc-CCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhc-CCcEEEEcC
Q 024549 4 DCDV-HGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKY-KENFFLLRG 65 (266)
Q Consensus 4 IgDi-HG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~-p~~v~~lrG 65 (266)
|=|- ..+.+.+.+.|+.+...+..+++.+||+...|+.+.+.-.-+..+-... .+.++ +-|
T Consensus 330 IDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~-~~G 392 (453)
T PRK10773 330 LDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVL-SVG 392 (453)
T ss_pred EEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEE-EEC
Confidence 3364 4457888888776654344578899999999999988766665443333 34444 446
No 139
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=28.91 E-value=58 Score=28.75 Aligned_cols=35 Identities=31% Similarity=0.475 Sum_probs=20.1
Q ss_pred eEEEeCCcccCCCCcHH-HHHHHHHhhhhcCCcEEEEc
Q 024549 28 NYLFLGDYVDRGKQSIE-TICLLLAYKVKYKENFFLLR 64 (266)
Q Consensus 28 ~~vfLGD~vDrG~~s~e-vl~~l~~lk~~~p~~v~~lr 64 (266)
+++|+||+|.+- ... +-..|-.||..+...++++-
T Consensus 2 riLfiGDvvGk~--Gr~~v~~~Lp~lk~kyk~dfvI~N 37 (266)
T COG1692 2 RILFIGDVVGKP--GRKAVKEHLPQLKSKYKIDFVIVN 37 (266)
T ss_pred eEEEEecccCcc--hHHHHHHHhHHHHHhhcCcEEEEc
Confidence 577888888542 222 23455567766655555553
No 140
>PF08497 Radical_SAM_N: Radical SAM N-terminal; InterPro: IPR013704 This domain tends to occur to the N terminus of PF04055 from PFAM radical SAM domain in hypothetical bacterial proteins. Proteins in this entry are radical SAM proteins, they catalyse diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. Evidence exists that these proteins generate a radical species by reductive cleavage of S:-adenosylmethionine (SAM) through an unusual Fe-S centre [, ].
Probab=27.15 E-value=93 Score=28.13 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=29.5
Q ss_pred HHHhcCCCCCceEEEeCC-cccCCCCcHHHHHHHHH
Q 024549 17 LFEYGGYPPEANYLFLGD-YVDRGKQSIETICLLLA 51 (266)
Q Consensus 17 ~l~~~~~~~~~~~vfLGD-~vDrG~~s~evl~~l~~ 51 (266)
=++..||..-|-+++.|| |||--.....++-.+++
T Consensus 8 em~~rGWd~lDvilVtGDAYVDHPsFG~AiIgR~Le 43 (302)
T PF08497_consen 8 EMKARGWDELDVILVTGDAYVDHPSFGAAIIGRVLE 43 (302)
T ss_pred HHHHcCCccccEEEEeCcccccCcchhHHHHHHHHH
Confidence 356679998899999999 99999999988887754
No 141
>PLN00084 photosystem II subunit S (PsbS); Provisional
Probab=26.95 E-value=36 Score=28.17 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=23.8
Q ss_pred eCCcccCCCCcHHHHHHHHHhh-------hhcCCcEEEEcCCcc
Q 024549 32 LGDYVDRGKQSIETICLLLAYK-------VKYKENFFLLRGNHE 68 (266)
Q Consensus 32 LGD~vDrG~~s~evl~~l~~lk-------~~~p~~v~~lrGNHE 68 (266)
+||.|.||..++|-|.-=.... +-+|+++.+++ ||=
T Consensus 9 vgdvvtrg~gp~eql~de~~~igahassvlfhpprftlv~-nhv 51 (214)
T PLN00084 9 VGDVVTRGAGPLEQLRDEEMFIGAHASSVLFHPPRFTLVM-NHI 51 (214)
T ss_pred hhhhhccCCCcHHHhhhhHHHhhhcccccccCCccchhhh-ccC
Confidence 7999999999999764322211 22676766555 774
No 142
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=26.12 E-value=61 Score=28.58 Aligned_cols=40 Identities=33% Similarity=0.438 Sum_probs=25.3
Q ss_pred eEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549 28 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 70 (266)
Q Consensus 28 ~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 70 (266)
+++|+||+|.+.-.. .+...|-.+|.+++..+.+. |=|..
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 479999999764332 33456677777776554443 55553
No 143
>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]
Probab=26.05 E-value=1.3e+02 Score=27.31 Aligned_cols=106 Identities=17% Similarity=0.219 Sum_probs=62.9
Q ss_pred HHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChHHHHHh------
Q 024549 12 SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRR------ 85 (266)
Q Consensus 12 ~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~------ 85 (266)
+.+-+.|..++-...+-++..-|+.. |..+-.+ +..+|+++ +-.|=-|+-++....|+.-....-
T Consensus 11 ~~~g~~L~~l~~~~~diVvl~ADl~~----St~~~~f----~~~fPdR~-~NvGIaEQ~mvg~AAGLA~~Gk~Pfv~tfa 81 (312)
T COG3958 11 KVYGETLAELGRKNSDIVVLDADLSS----STKTGYF----AKEFPDRF-FNVGIAEQDMVGTAAGLALAGKKPFVSTFA 81 (312)
T ss_pred HHHHHHHHHHHhcCCCEEEEeccccc----ccchhHH----HHhCchhh-eecchHHHHHHHHHHHHHhcCCCceeechH
Confidence 34555566666666777778888764 4443322 34589884 667888887776444432111111
Q ss_pred -h-chhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCC-----CCCHHHHhc
Q 024549 86 -F-NVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPD-----LKNLDQIRN 130 (266)
Q Consensus 86 -~-~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~-----~~~l~~i~~ 130 (266)
| ..+-|+.+...+++.-+ +=|++++|+|++.. .+.+|++.-
T Consensus 82 ~F~s~Ra~EQir~~iay~~l----nVKiv~t~~G~t~g~dG~sHq~~EDiai 129 (312)
T COG3958 82 AFLSRRAWEQIRNSIAYNNL----NVKIVATHAGVTYGEDGSSHQALEDIAI 129 (312)
T ss_pred HHHHHHHHHHHHHHhhhccC----CeEEEEecCCcccCCCCccchhHHHHHH
Confidence 1 23556666655554333 23899999999865 346777653
No 144
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=25.77 E-value=31 Score=33.21 Aligned_cols=57 Identities=23% Similarity=0.318 Sum_probs=38.3
Q ss_pred ChhHHHHHHHHCCCc----eEEeeeeeeccC--eE-EecCCeEEEE---ecCCCCCCCCCCcEEEEEE
Q 024549 170 GADKVVEFLQKHDLD----LICRAHQVVEDG--YE-FFAKRQLVTV---FSAPNYCGEFDNAGAMMSV 227 (266)
Q Consensus 170 G~~~~~~fl~~~~~~----~iIrgH~~~~~G--~~-~~~~~~~iti---fSa~~y~~~~~n~ga~l~i 227 (266)
.++..++.|+..|++ .||-||+|+.++ -. +-++|++|-| ||-. |....+=+|--+..
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskA-Yqs~TgiAGYTllY 580 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKA-YQSTTGIAGYTLLY 580 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhh-hhcccccceeEeee
Confidence 344567788888887 899999998743 22 3468899888 5544 65555555544443
No 145
>PRK00955 hypothetical protein; Provisional
Probab=21.91 E-value=1.2e+02 Score=30.44 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=29.3
Q ss_pred HHhcCCCCCceEEEeCC-cccCCCCcHHHHHHHHH
Q 024549 18 FEYGGYPPEANYLFLGD-YVDRGKQSIETICLLLA 51 (266)
Q Consensus 18 l~~~~~~~~~~~vfLGD-~vDrG~~s~evl~~l~~ 51 (266)
++..||..-|-+++.|| |||--+..++++..++.
T Consensus 6 ~~~~gw~~~d~i~v~gdayvdhp~fg~a~i~r~L~ 40 (620)
T PRK00955 6 MKKRGWDELDFILVTGDAYVDHPSFGTAIIGRVLE 40 (620)
T ss_pred HHHcCCCccCEEEEeCcccccCCccHHHHHHHHHH
Confidence 55679998899999999 99999999998887763
No 146
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.71 E-value=55 Score=23.18 Aligned_cols=22 Identities=27% Similarity=0.478 Sum_probs=18.6
Q ss_pred CCcccCCCCcHHHHHHHHHhhh
Q 024549 33 GDYVDRGKQSIETICLLLAYKV 54 (266)
Q Consensus 33 GD~vDrG~~s~evl~~l~~lk~ 54 (266)
-|++++|-+|+.++.++-.++.
T Consensus 22 eNLi~~GLDSiR~M~L~~~wR~ 43 (74)
T COG3433 22 ENLIDYGLDSIRMMALLERWRK 43 (74)
T ss_pred hhHHHhchhHHHHHHHHHHHHH
Confidence 3688999999999999877764
No 147
>PLN02965 Probable pheophorbidase
Probab=21.61 E-value=2.8e+02 Score=23.48 Aligned_cols=20 Identities=15% Similarity=0.263 Sum_probs=16.5
Q ss_pred HHHHHHHHCCC--ceEEeeeee
Q 024549 173 KVVEFLQKHDL--DLICRAHQV 192 (266)
Q Consensus 173 ~~~~fl~~~~~--~~iIrgH~~ 192 (266)
.+.++++..+. +.++.||..
T Consensus 60 dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 60 PLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHhcCCCCCEEEEecCc
Confidence 37788998875 799999985
No 148
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=20.93 E-value=1.8e+02 Score=24.82 Aligned_cols=36 Identities=25% Similarity=0.399 Sum_probs=25.9
Q ss_pred HHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCC
Q 024549 177 FLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNY 214 (266)
Q Consensus 177 fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y 214 (266)
.+-..|+++||-||..+..+++... ++ +-+||-=|+
T Consensus 202 ~l~~~G~D~IiG~H~Hv~q~~E~~~-~~-~I~YSlGNf 237 (239)
T cd07381 202 ALIDAGADLVIGHHPHVLQGIEIYK-GK-LIFYSLGNF 237 (239)
T ss_pred HHHHCCCCEEEcCCCCcCCCeEEEC-CE-EEEEcCCCc
Confidence 3344699999999999999999854 33 445665444
No 149
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=20.43 E-value=3.2e+02 Score=21.27 Aligned_cols=52 Identities=12% Similarity=0.117 Sum_probs=32.0
Q ss_pred HHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCC
Q 024549 12 SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGN 66 (266)
Q Consensus 12 ~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGN 66 (266)
+.|.++|...|..+.+.+|+-++-=.+|..+..+... |+..=-.+|.++-|-
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~---l~~~G~~~v~ildGG 132 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALA---ARLCGHPDVAILDGG 132 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHH---HHHcCCCCeEEeCCC
Confidence 5889999999999888888876521234444544333 332212357776653
Done!