Query         024549
Match_columns 266
No_of_seqs    256 out of 2060
Neff          7.8 
Searched_HMMs 29240
Date          Mon Mar 25 10:12:19 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024549.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024549hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3e7a_A PP-1A, serine/threonine 100.0 3.3E-71 1.1E-75  494.4  24.2  241    1-241    58-298 (299)
  2 1fjm_A Protein serine/threonin 100.0 6.2E-69 2.1E-73  486.6  25.4  263    1-264    59-326 (330)
  3 3h63_A Serine/threonine-protei 100.0 2.3E-67 7.8E-72  472.7  23.2  241    2-243    63-306 (315)
  4 3icf_A PPT, serine/threonine-p 100.0   3E-67   1E-71  475.1  23.6  242    1-243    66-320 (335)
  5 3ll8_A Serine/threonine-protei 100.0 8.3E-67 2.8E-71  474.2  24.5  242    1-243    72-326 (357)
  6 2ie4_C PP2A-alpha;, serine/thr 100.0   2E-64   7E-69  454.1  24.5  243    1-244    52-295 (309)
  7 1aui_A Calcineurin, serine/thr 100.0 1.6E-63 5.5E-68  468.8  24.7  242    1-243    85-339 (521)
  8 1wao_1 Serine/threonine protei 100.0 1.7E-60 5.8E-65  452.3  24.7  241    2-243   216-459 (477)
  9 2z72_A Protein-tyrosine-phosph 100.0 8.6E-41 2.9E-45  305.0   9.3  218    1-230    73-321 (342)
 10 2dfj_A Diadenosinetetraphospha 100.0 1.2E-34   4E-39  257.6   2.4  191    1-199     3-209 (280)
 11 2qjc_A Diadenosine tetraphosph  99.9 9.3E-25 3.2E-29  192.0  10.6  199    1-230    21-239 (262)
 12 1g5b_A Serine/threonine protei  99.9 3.3E-23 1.1E-27  177.1   8.9  155    1-194    15-190 (221)
 13 3rqz_A Metallophosphoesterase;  99.8   3E-18   1E-22  148.6  13.9  187    1-238     6-218 (246)
 14 1nnw_A Hypothetical protein; s  99.8 1.3E-17 4.4E-22  144.4  17.7  195    1-239     4-223 (252)
 15 3qfm_A SAPH, putative uncharac  99.8 6.9E-18 2.4E-22  148.7  13.8  113    1-118    14-139 (270)
 16 1uf3_A Hypothetical protein TT  99.3 6.2E-12 2.1E-16  105.9  11.7   70    1-71      8-77  (228)
 17 1s3l_A Hypothetical protein MJ  99.3 4.2E-11 1.4E-15   99.8  12.0   62    2-72     29-90  (190)
 18 2a22_A Vacuolar protein sortin  99.2 7.5E-10 2.6E-14   93.8  16.3  117    2-195    29-154 (215)
 19 3ck2_A Conserved uncharacteriz  99.2   3E-10   1E-14   93.1  13.1  107    2-196    10-119 (176)
 20 2kkn_A Uncharacterized protein  99.2 4.6E-11 1.6E-15   98.6   8.0   59    2-70     26-86  (178)
 21 1su1_A Hypothetical protein YF  99.1 4.8E-11 1.6E-15  100.8   6.9   66    2-71     29-102 (208)
 22 2yvt_A Hypothetical protein AQ  99.1 2.8E-10 9.6E-15   98.0  11.9   70    1-71      8-103 (260)
 23 1z2w_A Vacuolar protein sortin  99.1 1.9E-09 6.6E-14   89.5  14.0   61    2-71     14-77  (192)
 24 3ib7_A ICC protein; metallopho  99.0 4.8E-09 1.7E-13   93.1  14.8   70    1-70     28-113 (330)
 25 1xm7_A Hypothetical protein AQ  99.0 6.1E-10 2.1E-14   92.6   8.4  133    2-199     5-156 (195)
 26 3d03_A Phosphohydrolase; glyce  98.9 5.8E-08   2E-12   83.7  15.3   66    1-70      3-84  (274)
 27 3rl5_A Metallophosphoesterase   98.8 2.2E-08 7.4E-13   89.0  10.4   61    1-71     62-124 (296)
 28 2xmo_A LMO2642 protein; phosph  98.6 3.8E-07 1.3E-11   84.7  13.3   60   11-71     78-139 (443)
 29 2q8u_A Exonuclease, putative;   98.2 1.2E-06 4.1E-11   78.6   5.3   69    1-71     21-110 (336)
 30 3av0_A DNA double-strand break  98.1 3.2E-06 1.1E-10   77.5   6.4   70    1-71     23-109 (386)
 31 2nxf_A Putative dimetal phosph  98.1 1.4E-06 4.6E-11   76.3   2.9   70    1-70      8-100 (322)
 32 1ii7_A MRE11 nuclease; RAD50,   98.1   4E-06 1.4E-10   75.1   6.0   69    1-70      3-88  (333)
 33 1ute_A Protein (II purple acid  98.0 4.2E-05 1.4E-09   66.6  11.0   70    1-70      9-95  (313)
 34 3tho_B Exonuclease, putative;   97.6 2.2E-05 7.4E-10   71.8   2.9   68    1-70      3-91  (379)
 35 3t1i_A Double-strand break rep  97.6 5.5E-05 1.9E-09   70.4   5.1   71    1-71     35-153 (431)
 36 4fbk_A DNA repair and telomere  97.6 8.3E-05 2.8E-09   69.7   5.9   50    1-50     79-140 (472)
 37 4fbw_A DNA repair protein RAD3  97.5   8E-05 2.7E-09   69.0   5.7   50    1-50     16-77  (417)
 38 2qfp_A Purple acid phosphatase  96.5  0.0024 8.1E-08   58.7   5.1   67    2-71    123-198 (424)
 39 1xzw_A Purple acid phosphatase  96.2  0.0039 1.3E-07   57.4   4.7   67    2-71    130-205 (426)
 40 3tgh_A Glideosome-associated p  95.6  0.0023   8E-08   57.6   0.6   70    2-71      7-87  (342)
 41 1hp1_A 5'-nucleotidase; metall  95.6  0.0042 1.4E-07   58.7   2.1   65    1-70     11-95  (516)
 42 3qfk_A Uncharacterized protein  95.5  0.0053 1.8E-07   58.3   2.5   64    1-69     22-112 (527)
 43 2z1a_A 5'-nucleotidase; metal-  94.8   0.018 6.2E-07   54.9   3.9   65    1-70     32-119 (552)
 44 4h2g_A 5'-nucleotidase; dimer,  94.4   0.017 5.8E-07   55.1   2.7   64    1-69     28-117 (546)
 45 3ive_A Nucleotidase; structura  94.0   0.016 5.6E-07   54.7   1.5   64    1-69      9-96  (509)
 46 3ztv_A NAD nucleotidase, NADN;  93.7   0.042 1.4E-06   52.7   3.8   64    1-69     15-105 (579)
 47 3jyf_A 2',3'-cyclic nucleotide  92.7   0.055 1.9E-06   48.5   2.8   64    2-70     12-105 (339)
 48 3gve_A YFKN protein; alpha-bet  92.3   0.057 1.9E-06   48.4   2.4   40    2-41     15-71  (341)
 49 3c9f_A 5'-nucleotidase; 2',3'-  91.8   0.051 1.7E-06   52.0   1.5   66    1-71     18-108 (557)
 50 1t71_A Phosphatase, conserved   91.8   0.085 2.9E-06   46.0   2.9   65    1-70      7-75  (281)
 51 4h1s_A 5'-nucleotidase; hydrol  88.0    0.35 1.2E-05   45.6   3.9   63    2-69      7-95  (530)
 52 2z06_A Putative uncharacterize  87.9    0.47 1.6E-05   40.7   4.2   65    1-71      3-70  (252)
 53 1t70_A Phosphatase; crystal, X  84.4       1 3.5E-05   38.5   4.6   64    1-70      3-69  (255)
 54 2wdc_A SOXB, sulfur oxidation   75.7     1.4 4.9E-05   41.9   2.9   55    9-69    102-166 (562)
 55 2yeq_A Apased, PHOD, alkaline   70.2     5.1 0.00017   37.7   5.2   24  171-194   359-384 (527)
 56 3flo_A DNA polymerase alpha su  50.1      31   0.001   31.9   6.4   61   10-70    164-247 (460)
 57 2nxf_A Putative dimetal phosph  26.7 2.1E+02  0.0072   23.3   7.7   28  168-195   242-270 (322)
 58 3e0j_A DNA polymerase subunit   26.5      78  0.0027   29.3   5.1   54  183-241   406-462 (476)

No 1  
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=100.00  E-value=3.3e-71  Score=494.37  Aligned_cols=241  Identities=83%  Similarity=1.486  Sum_probs=235.0

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD   80 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~   80 (266)
                      +++||||||++++|.++|+..++++.+++||||||||||++|+|++.+|+++|+.+|.++++||||||.+.++..|||.+
T Consensus        58 i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~  137 (299)
T 3e7a_A           58 LKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD  137 (299)
T ss_dssp             EEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHH
T ss_pred             EEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchH
Confidence            35788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549           81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE  160 (266)
Q Consensus        81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~  160 (266)
                      |+..+|+..+|+.+.++|+.||++++++++++|||||++|.+.++++|+++.||.+.++.++++|+|||||.....+|.+
T Consensus       138 e~~~ky~~~l~~~~~~~f~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~~~~dllWsDP~~~~~~~~~  217 (299)
T 3e7a_A          138 ECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGE  217 (299)
T ss_dssp             HHHHHSCHHHHHHHHHHHTTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSSHHHHHHHCEECTTCSSEEE
T ss_pred             HHHHHhhHHHHHHHHHHHhhCCceEEECCeEEEEcCccCcccCCHHHHHhccCCCcCCcchhhhhhhcCCccccccCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988889999


Q ss_pred             CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEec
Q 024549          161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA  240 (266)
Q Consensus       161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~  240 (266)
                      |+||.++.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.+++++.++|++++|
T Consensus       218 ~~RG~~~~fG~~~~~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~  297 (299)
T 3e7a_A          218 NDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP  297 (299)
T ss_dssp             CTTSSSEEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECC
T ss_pred             CCCCcceeeCHHHHHHHHHHCCCeEEEEcCeeeecceEEecCCeEEEEECCcccCCCCCccEEEEEECCCCcEEEEEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             c
Q 024549          241 S  241 (266)
Q Consensus       241 ~  241 (266)
                      .
T Consensus       298 ~  298 (299)
T 3e7a_A          298 A  298 (299)
T ss_dssp             C
T ss_pred             C
Confidence            6


No 2  
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=100.00  E-value=6.2e-69  Score=486.65  Aligned_cols=263  Identities=79%  Similarity=1.409  Sum_probs=234.7

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD   80 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~   80 (266)
                      +++|||||||+++|.++|+..++++.+++||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||.+
T Consensus        59 i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~  138 (330)
T 1fjm_A           59 LKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD  138 (330)
T ss_dssp             EEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHH
T ss_pred             eEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhh
Confidence            36788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCcc
Q 024549           81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGE  160 (266)
Q Consensus        81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~  160 (266)
                      ++..+|+.++|+.+.+||+.||++++++++++|||||++|.+.++++++.+.||.+.++.++++++||+||.....+|.+
T Consensus       139 e~~~~y~~~l~~~~~~~f~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g~~~dlLWsdp~~~~~~w~~  218 (330)
T 1fjm_A          139 ECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGE  218 (330)
T ss_dssp             HHHHHSCHHHHHHHHHHHTTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSSHHHHHHHCEECTTCSSEEE
T ss_pred             hhhhhccHHHHHHHHHHHHhCCceEEEcCcEEEEccCCCcccCCHHHHhhhhcCccCcccchHHHHHhcCCccccCCcCc
Confidence            99999998999999999999999999999999999999999999999999999999988999999999999987789999


Q ss_pred             CCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEec
Q 024549          161 NDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA  240 (266)
Q Consensus       161 ~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~  240 (266)
                      +.||.++.||++++++||++++++++|||||++++||+++++++|||||||||||+.++|+||+|.|++++.++|++++|
T Consensus       219 ~~rG~~~~fG~~~~~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~lvTvfSapnY~~~~~N~ga~l~i~~~~~~~~~~~~~  298 (330)
T 1fjm_A          219 NDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP  298 (330)
T ss_dssp             CTTSSSEEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTCCSSSCCCEEEEEECTTCCEEEEEECC
T ss_pred             ccCCCceeeChHHHHHHHHhCCCceEecccccccCCeEEccCCeEEEEeCCcccccCCCCcEEEEEECCCCcEeEEEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCcCCCC-----CCCCCCCCCCCCC
Q 024549          241 SEKKGKVGFGN-----NMLRPGTPPHKGG  264 (266)
Q Consensus       241 ~~~~~~~~~~~-----~~~~~~~~~~~~~  264 (266)
                      .+.. +..++.     ...||+||||++-
T Consensus       299 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  326 (330)
T 1fjm_A          299 ADKN-KGKYGQFSGLNPGGRPITPPRNSA  326 (330)
T ss_dssp             CC---------------------------
T ss_pred             Cccc-ccccccccccccccCCCCCCCCcc
Confidence            9988 555532     1579999998753


No 3  
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=100.00  E-value=2.3e-67  Score=472.68  Aligned_cols=241  Identities=44%  Similarity=0.807  Sum_probs=230.1

Q ss_pred             EEEEccCCCHHHHHHHHHhcCCCCCce-EEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549            2 IYDCDVHGQFSDLLRLFEYGGYPPEAN-YLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD   80 (266)
Q Consensus         2 i~IgDiHG~~~~l~~~l~~~~~~~~~~-~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~   80 (266)
                      ++|||||||+.+|.++|+..++++.+. +||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||..
T Consensus        63 ~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~  142 (315)
T 3h63_A           63 TVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEG  142 (315)
T ss_dssp             EEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHH
T ss_pred             EEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccH
Confidence            578899999999999999999987765 9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCC-CCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCc
Q 024549           81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGL-SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG  159 (266)
Q Consensus        81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi-~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~  159 (266)
                      |+..+|+..+|+.+.++|+.||++++++++++|||||+ +|...++++|+++.|+.+.++.++++|+|||||.. ..+|.
T Consensus       143 e~~~k~~~~l~~~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g~~~dllWsDP~~-~~g~~  221 (315)
T 3h63_A          143 EVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQP-QNGRS  221 (315)
T ss_dssp             HHHHHSCHHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSSHHHHHHHCEECS-SSSEE
T ss_pred             HHHHHhhhHHHHHHHHHHhcCCcEEEEcCCEEEeCCCCCCcccCCHHHHHhCcccccccccchhhhheecCCCC-CCCcC
Confidence            99999999999999999999999999999999999999 78888999999999999999999999999999985 47899


Q ss_pred             cCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEc-CCCceEEEEE
Q 024549          160 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVD-DTLTCSFQIL  238 (266)
Q Consensus       160 ~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~  238 (266)
                      +++||.++.||++++++||++|++++||||||++++||+++++++|||||||||||+..+|+||+|.++ ++++..|.++
T Consensus       222 ~s~RG~g~~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f  301 (315)
T 3h63_A          222 ISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQF  301 (315)
T ss_dssp             ECTTSSSEEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEE
T ss_pred             cCCCCceEEECHHHHHHHHHHcCCcEEEEeceeecCCeEEecCCeEEEEECCcccCCCCCccEEEEEEECCCCeEeeEEE
Confidence            999999999999999999999999999999999999999999999999999999999999999999996 6788999999


Q ss_pred             ecccc
Q 024549          239 KASEK  243 (266)
Q Consensus       239 ~~~~~  243 (266)
                      +++|.
T Consensus       302 ~~~~~  306 (315)
T 3h63_A          302 TAVPH  306 (315)
T ss_dssp             CCCCC
T ss_pred             ecCCC
Confidence            98764


No 4  
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=100.00  E-value=3e-67  Score=475.14  Aligned_cols=242  Identities=40%  Similarity=0.708  Sum_probs=229.3

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCc-eEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY   79 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~-~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~   79 (266)
                      +++|||||||+.+|.++|+..++++.+ ++||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||.
T Consensus        66 i~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~  145 (335)
T 3icf_A           66 ISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFE  145 (335)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHH
T ss_pred             EEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccc
Confidence            367889999999999999999998665 5999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCC-CCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCC
Q 024549           80 DECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGL-SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGW  158 (266)
Q Consensus        80 ~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi-~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~  158 (266)
                      .|+..+|+.++|+.+.++|+.||++++++++++|||||+ +|...++++|+.+.|+.+.+..++++|+|||||.. ..+|
T Consensus       146 ~e~~~k~~~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g~~~dlLWSDP~~-~~g~  224 (335)
T 3icf_A          146 DECKYKYSQRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDGAFMELLWADPQE-ANGM  224 (335)
T ss_dssp             HHHHHHSCHHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSSHHHHHHHCEECS-SSSE
T ss_pred             hHhHhhccHHHHHHHHHHHhhcceeEEEcCcEEEecCCcCCCccCCHHHHHhCccccccccccchhhhhccCCCC-cCCc
Confidence            999999999999999999999999999999999999999 78889999999999999999999999999999985 4789


Q ss_pred             ccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcC---------
Q 024549          159 GENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDD---------  229 (266)
Q Consensus       159 ~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~---------  229 (266)
                      .+++||.++.||++++++||++|++++||||||++++||+++++++|||||||||||+.++|+||+|.|++         
T Consensus       225 ~~s~RG~g~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~  304 (335)
T 3icf_A          225 GPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGR  304 (335)
T ss_dssp             EECCCC--EEECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTT
T ss_pred             ccCCCCCceeeCHHHHHHHHHHCCCeEEEEcCceecCeEEEecCCcEEEEECCcccCCCCCCceEEEEEecccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999         


Q ss_pred             --CCceEEEEEecccc
Q 024549          230 --TLTCSFQILKASEK  243 (266)
Q Consensus       230 --~~~~~~~~~~~~~~  243 (266)
                        ++...|.+++++|.
T Consensus       305 ~~~~~~~~~~f~~~~~  320 (335)
T 3icf_A          305 NDDQNLIIETFEAVEH  320 (335)
T ss_dssp             BCCTTEEEEEECCCCC
T ss_pred             cccCceeEEEEecCCC
Confidence              78999999998765


No 5  
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=100.00  E-value=8.3e-67  Score=474.24  Aligned_cols=242  Identities=43%  Similarity=0.851  Sum_probs=227.7

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD   80 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~   80 (266)
                      +++|||||||+.+|.++|+..+.++.+++||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||.+
T Consensus        72 i~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~  151 (357)
T 3ll8_A           72 VTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQ  151 (357)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHH
T ss_pred             ceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchh
Confidence            36788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCC-----
Q 024549           81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI-----  155 (266)
Q Consensus        81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~-----  155 (266)
                      |+..+|+.++|+.+.++|+.||++++++++++|||||++|.+.++++|+++.|+.+.+..+.++|+|||||....     
T Consensus       152 E~~~ky~~~l~~~~~~~f~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g~~~DlLWSDP~~~~~~~~~  231 (357)
T 3ll8_A          152 ECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKT  231 (357)
T ss_dssp             HHHHHSCHHHHHHHHHHHHTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSSHHHHHHHCEECTTTTSCSC
T ss_pred             hhhhccchhHHHHHHHHHHhCCcceEEcccEEEEecCcCcccCCHHHHhhccccccCCccCchhHhhccCcccccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999998642     


Q ss_pred             -CCCc-cCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCC------eEEEEecCCCCCCCCCCcEEEEEE
Q 024549          156 -EGWG-ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKR------QLVTVFSAPNYCGEFDNAGAMMSV  227 (266)
Q Consensus       156 -~~~~-~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~ga~l~i  227 (266)
                       .+|. +++||.++.||++++++||++|++++||||||++++||++++++      +|||||||||||+.++|+||+|.+
T Consensus       232 ~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~  311 (357)
T 3ll8_A          232 QEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY  311 (357)
T ss_dssp             CCSEEECTTTTSSEEECHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEE
T ss_pred             ccccccCCCCCCceEEChHHHHHHHHHCCCeEEEEeccccccceEEecCCcCCCCCcEEEEECCCccCCCCCccEEEEEE
Confidence             2354 45899999999999999999999999999999999999998876      699999999999999999999999


Q ss_pred             cCCCceEEEEEecccc
Q 024549          228 DDTLTCSFQILKASEK  243 (266)
Q Consensus       228 ~~~~~~~~~~~~~~~~  243 (266)
                      ++++ ..+++++++|.
T Consensus       312 ~~~~-~~~~~f~~~~h  326 (357)
T 3ll8_A          312 ENNV-MNIRQFNCSPH  326 (357)
T ss_dssp             ETTE-EEEEEECCCCC
T ss_pred             ECCc-ceEEEecCCCC
Confidence            8876 68889988763


No 6  
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=100.00  E-value=2e-64  Score=454.05  Aligned_cols=243  Identities=51%  Similarity=0.988  Sum_probs=231.3

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD   80 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~   80 (266)
                      +++|||||||+++|.++|+..+.++.+.+||||||||||++|+|++.+|++||..+|.++++||||||.+.++..|||.+
T Consensus        52 i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~  131 (309)
T 2ie4_C           52 VTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYD  131 (309)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHH
T ss_pred             EEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhH
Confidence            36788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-hhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCc
Q 024549           81 ECKRRFN-VRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG  159 (266)
Q Consensus        81 e~~~~~~-~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~  159 (266)
                      ++..+|+ ..+|+.+.++|+.||++++++++++|||||++|.+.++++++.+.|+.+.+..+.++++|||||.. ..+|.
T Consensus       132 e~~~~yg~~~l~~~~~~~~~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~  210 (309)
T 2ie4_C          132 ECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDD-RGGWG  210 (309)
T ss_dssp             HHHHHSSSTHHHHHHHHHTTSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSSHHHHHHHCEECS-SSSEE
T ss_pred             HHHhhcccHHHHHHHHHHHHhCCceEEEcCcEEEECCCCCCcccCHHHHHhhcccccCChhHHHHHHhhCCCcc-ccccc
Confidence            9999995 579999999999999999899999999999999999999999999999988999999999999984 47899


Q ss_pred             cCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEe
Q 024549          160 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILK  239 (266)
Q Consensus       160 ~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~  239 (266)
                      +++||.++.||++++++||+++|+++||||||++++||+++++++|||||||||||+.++|+||+|.|++++.++|.+++
T Consensus       211 ~s~RG~g~~fG~~~~~~fl~~n~l~~iir~Hq~~~~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i~~~~~~~~~~~~  290 (309)
T 2ie4_C          211 ISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFD  290 (309)
T ss_dssp             ECTTSSSEEECHHHHHHHHHHTTCSEEEECCSCCTEEEEEETTTTEEEECCCSSGGGTSCCEEEEEEECTTCCEEEEEEC
T ss_pred             cCCCCcccccCHHHHHHHHHHcCCeEEEecCcceeCCEEEecCCeEEEEECCcccccCCCCeEEEEEECCCCcEeEEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc
Q 024549          240 ASEKK  244 (266)
Q Consensus       240 ~~~~~  244 (266)
                      |++..
T Consensus       291 ~~~~~  295 (309)
T 2ie4_C          291 PAPRR  295 (309)
T ss_dssp             CCC--
T ss_pred             CCCCc
Confidence            99865


No 7  
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=100.00  E-value=1.6e-63  Score=468.80  Aligned_cols=242  Identities=44%  Similarity=0.852  Sum_probs=227.7

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD   80 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~   80 (266)
                      +++|||||||+++|.++|+..+.++.+++||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||..
T Consensus        85 I~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~  164 (521)
T 1aui_A           85 VTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQ  164 (521)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHH
T ss_pred             eeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccH
Confidence            36788999999999999999898889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCC-----
Q 024549           81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI-----  155 (266)
Q Consensus        81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~-----  155 (266)
                      ++..+|+..+|+.+.+||+.||++++++++++|||||++|.+.++++|+.+.|+.+.+..+.++|+|||||....     
T Consensus       165 E~~~ky~~~l~~~~~~~f~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g~~~DLLWSDP~~~~g~~~~  244 (521)
T 1aui_A          165 ECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKT  244 (521)
T ss_dssp             HHHHHSCHHHHHHHHHHHTTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSSHHHHHHHCEECTTTTSCSS
T ss_pred             HHHHhhhhHHHHHHHHHHHhCCceEEecCCceEECCCcCcccCCHHHhhhccCCcCCCccchhhhheecCcccccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999998642     


Q ss_pred             -CCCccC-CCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCC------eEEEEecCCCCCCCCCCcEEEEEE
Q 024549          156 -EGWGEN-DRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKR------QLVTVFSAPNYCGEFDNAGAMMSV  227 (266)
Q Consensus       156 -~~~~~~-~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~ga~l~i  227 (266)
                       .+|..| .||.++.||++++++||++||+++||||||++++||++++++      +|||||||||||+.++|+||+|.|
T Consensus       245 ~~~f~~ns~RG~g~~FG~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i  324 (521)
T 1aui_A          245 QEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY  324 (521)
T ss_dssp             CCCEEECTTTTSSEEECHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEE
T ss_pred             CcceecccCCCcccccCHHHHHHHHHHcCCcEEEEccchhccceeeecCCcCCCCCeEEEEeCCcccCCCCCceEEEEEE
Confidence             356665 799999999999999999999999999999999999999887      599999999999999999999999


Q ss_pred             cCCCceEEEEEecccc
Q 024549          228 DDTLTCSFQILKASEK  243 (266)
Q Consensus       228 ~~~~~~~~~~~~~~~~  243 (266)
                      +++ .+.|++|++++.
T Consensus       325 ~~~-~~~~~~f~~~~~  339 (521)
T 1aui_A          325 ENN-VMNIRQFNCSPH  339 (521)
T ss_dssp             ETT-EEEEEEECCCCC
T ss_pred             eCC-cceEEEecCCCC
Confidence            998 588999988763


No 8  
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=100.00  E-value=1.7e-60  Score=452.27  Aligned_cols=241  Identities=44%  Similarity=0.802  Sum_probs=228.9

Q ss_pred             EEEEccCCCHHHHHHHHHhcCCCCC-ceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChH
Q 024549            2 IYDCDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYD   80 (266)
Q Consensus         2 i~IgDiHG~~~~l~~~l~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~   80 (266)
                      ++||||||++.+|.++|+..+.++. +.+||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||..
T Consensus       216 ~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~  295 (477)
T 1wao_1          216 TVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEG  295 (477)
T ss_dssp             EEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHH
T ss_pred             EEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHH
Confidence            5788999999999999999998875 459999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCC-CCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCCc
Q 024549           81 ECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGL-SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG  159 (266)
Q Consensus        81 e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi-~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~  159 (266)
                      ++..+|+..+|+.+.++|+.||++++++++++|||||+ +|...++++|+.+.|+.+.+..+.++|+|||||... .+|.
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~~~~dllWsdp~~~-~~~~  374 (477)
T 1wao_1          296 EVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQ-NGRS  374 (477)
T ss_dssp             HHHHHSCTTHHHHHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSSHHHHHHHCEECSS-SSCE
T ss_pred             HHHHHhhHHHHHHHHHHhccCCcEEEEcCcEEEECCCCCccccCCHHHHHhccCCCCCchhhhhhhhccCCCCcc-CCcC
Confidence            99999999999999999999999999999999999999 677789999999999999999999999999999854 6788


Q ss_pred             cCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCCcEEEEEE-cCCCceEEEEE
Q 024549          160 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSV-DDTLTCSFQIL  238 (266)
Q Consensus       160 ~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i-~~~~~~~~~~~  238 (266)
                      +++||.++.||++++++||+++++++||||||++++||+++++++|||||||||||+..+|+||+|.| ++++++.|+++
T Consensus       375 ~~~rg~~~~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~  454 (477)
T 1wao_1          375 ISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQF  454 (477)
T ss_dssp             ECTTSSSEEECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEE
T ss_pred             cCCCCCceeECHHHHHHHHHHcCCeEEEECCCCCcCCeEEecCCeEEEEeCCcccccCCCccEEEEEEECCCCeEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999 68899999999


Q ss_pred             ecccc
Q 024549          239 KASEK  243 (266)
Q Consensus       239 ~~~~~  243 (266)
                      +|++.
T Consensus       455 ~~~~~  459 (477)
T 1wao_1          455 TAVPH  459 (477)
T ss_dssp             CCCCC
T ss_pred             eCCCC
Confidence            98764


No 9  
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=100.00  E-value=8.6e-41  Score=305.00  Aligned_cols=218  Identities=22%  Similarity=0.325  Sum_probs=173.6

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCC--------CceEEEeCCcccCCCCcHHHHHHHHHhhh---hcCCcEEEEcCCccc
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPP--------EANYLFLGDYVDRGKQSIETICLLLAYKV---KYKENFFLLRGNHEC   69 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~--------~~~~vfLGD~vDrG~~s~evl~~l~~lk~---~~p~~v~~lrGNHE~   69 (266)
                      +++||||||++++|.++|+..++.+        .+.+||+|||||||++|.|++.+|++|+.   .+|.++++||||||.
T Consensus        73 i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v~~v~GNHE~  152 (342)
T 2z72_A           73 VVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQ  152 (342)
T ss_dssp             EEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEEEECCCHHHH
T ss_pred             EEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEecCCcH
Confidence            3678899999999999999988653        57899999999999999999999999986   689999999999999


Q ss_pred             cchhhh-------cCChHHHHHhhchhhH---hhhhhhhccCCeEEEEcCcEEEecCCCCCCCC----CHHHHhcccCCC
Q 024549           70 ASINRI-------YGFYDECKRRFNVRVW---KTFTDCFNCLPVAALVDEKILCMHGGLSPDLK----NLDQIRNIARPV  135 (266)
Q Consensus        70 ~~~~~~-------~gf~~e~~~~~~~~~~---~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~----~l~~i~~i~r~~  135 (266)
                      +.++..       |++..++.......+|   ....+||+.||++++++ +++|||||++|.+.    ++++++.+.|+.
T Consensus       153 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~~~~l~~i~~~~r~~  231 (342)
T 2z72_A          153 MVLGGDLRYVHQRYDIATTLINRPYNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISRELTLDKANALYRAN  231 (342)
T ss_dssp             HHHHTCCTTSCTTHHHHHHHTTSCGGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHTTCCHHHHHHHHHHH
T ss_pred             HHhhCcccccccccchHHHHhcccHHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhcccCCCHHHHHHHhhhh
Confidence            887632       2222222111122444   35678999999998877 89999999999763    889998887753


Q ss_pred             CC-----CCcchhhhhhhcCCCCCCCCCccCCCCc-eeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEe
Q 024549          136 DV-----PDQGLLCDLLWADPDKDIEGWGENDRGV-SYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVF  209 (266)
Q Consensus       136 ~~-----~~~~~~~dllWsdp~~~~~~~~~~~rg~-~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itif  209 (266)
                      ..     +..+...+++|++|..   .|   .|+. +..||++++++||+.++.++||||||+++. +...+++++||||
T Consensus       232 ~~~~~~~~~~~~~~~~lwsd~~~---~w---~R~~~~~~fg~~~~~~fl~~~~~~~IV~GHt~~~~-~~~~~~~~~i~Id  304 (342)
T 2z72_A          232 VDASKKSLKADDLLNFLFFGNGP---TW---YRGYFSETFTEAELDTILQHFNVNHIVVGHTSQER-VLGLFHNKVIAVD  304 (342)
T ss_dssp             TTSCHHHHHHSHHHHHHHSTTST---TT---CCGGGSTTCCHHHHHHHHHHHTCSEEEECSSCCSS-CEEETTTTEEECC
T ss_pred             ccccccccccCHHHHhccCCCCC---CC---cCCcccccCChHHHHHHHHHCCCcEEEECCCcccc-hhhhcCCCEEEEE
Confidence            21     1234568999999864   23   3554 457999999999999999999999999976 6667789999999


Q ss_pred             cCCCCCCCCCCcEEEEEEcCC
Q 024549          210 SAPNYCGEFDNAGAMMSVDDT  230 (266)
Q Consensus       210 Sa~~y~~~~~n~ga~l~i~~~  230 (266)
                      |+++|.    |.++++.|+++
T Consensus       305 sg~~~g----g~la~l~i~~~  321 (342)
T 2z72_A          305 SSIKVG----KSGELLLLENN  321 (342)
T ss_dssp             CCGGGS----SCCCEEEEETT
T ss_pred             CCCCCC----CcEEEEEEECC
Confidence            999983    78888999887


No 10 
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=100.00  E-value=1.2e-34  Score=257.60  Aligned_cols=191  Identities=19%  Similarity=0.363  Sum_probs=147.6

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCC-CCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGY-PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY   79 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~-~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~   79 (266)
                      +++|||||||+++|.++|+.++. +..+.+||+|||||||++|.+++.+|+++    |.++++|+||||.+.++..+|+.
T Consensus         3 i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~l~~~~g~~   78 (280)
T 2dfj_A            3 TYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHLLAVFAGIS   78 (280)
T ss_dssp             EEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHHHHHHTTSS
T ss_pred             EEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHHHhHhcCCc
Confidence            36788999999999999999998 46788999999999999999999999877    45899999999999998777775


Q ss_pred             HHH-----HHhhchhhHhhhhhhhccCCeEEEEcC-cEEEecCCCCCCCCCHHHHhcccCCCC----CCCcchhhhhhhc
Q 024549           80 DEC-----KRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARPVD----VPDQGLLCDLLWA  149 (266)
Q Consensus        80 ~e~-----~~~~~~~~~~~~~~~~~~LPl~~~i~~-~~l~vHgGi~p~~~~l~~i~~i~r~~~----~~~~~~~~dllWs  149 (266)
                      ...     .+.+.......+.+||+.||+++.+++ +++|||||++|.+ +++++..+.|+.+    .++...+.+.+|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~~~~~~~l~~  157 (280)
T 2dfj_A           79 RNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSYPFFLDAMYG  157 (280)
T ss_dssp             CCCGGGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTHHHHHHHTTC
T ss_pred             ccchhhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcHHHHHHHhcC
Confidence            321     111223355677899999999988787 8999999999998 7998887776653    3445567899999


Q ss_pred             CCCCCCCCCccCCCCce-eecChhHH--HHHHHHCC-CceEEeee-eeeccCeEE
Q 024549          150 DPDKDIEGWGENDRGVS-YTFGADKV--VEFLQKHD-LDLICRAH-QVVEDGYEF  199 (266)
Q Consensus       150 dp~~~~~~~~~~~rg~~-~~fG~~~~--~~fl~~~~-~~~iIrgH-~~~~~G~~~  199 (266)
                      ||.   ..|.++.||.+ +.||.+++  .+||+.+| +++++|+| +.+++|+..
T Consensus       158 d~~---~~w~~~~~G~~r~~~~~~~~tr~rf~~~~g~l~~~~r~~~~~~~~g~~~  209 (280)
T 2dfj_A          158 DMP---NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKP  209 (280)
T ss_dssp             SCC---CSCCTTCCHHHHHHHHHHHHHTCCEEETTBEEESSCCSCGGGCCSSCEE
T ss_pred             CCC---CCcCCCCCCceeEEEeccHHHHHHHhhcCCcEeEEeccChhhcCccccc
Confidence            996   56888888876 66777773  44666665 55555555 344444443


No 11 
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.91  E-value=9.3e-25  Score=192.01  Aligned_cols=199  Identities=17%  Similarity=0.244  Sum_probs=128.4

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCC-ceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY   79 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~   79 (266)
                      +++||||||++++|.++|+.++..+. +.+||+|||||||+++.+++.+|..+      ++++|+||||.+.++..+++.
T Consensus        21 i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~------~~~~v~GNHd~~~~~~~~~~~   94 (262)
T 2qjc_A           21 VIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL------GAYSVLGNHDAKLLKLVKKLG   94 (262)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH------TCEECCCHHHHHHHHHHHCC-
T ss_pred             EEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHHHHHHHHHHC------CCEEEeCcChHHHHhhhcCCC
Confidence            36788999999999999999888765 89999999999999999999988754      589999999999877655654


Q ss_pred             HH-HHHhhc---------hhhHhhhhhhhccCCeEEEEc-CcEEEecCCCCCCCC----CHHHHhccc---CCCCCCCcc
Q 024549           80 DE-CKRRFN---------VRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDLK----NLDQIRNIA---RPVDVPDQG  141 (266)
Q Consensus        80 ~e-~~~~~~---------~~~~~~~~~~~~~LPl~~~i~-~~~l~vHgGi~p~~~----~l~~i~~i~---r~~~~~~~~  141 (266)
                      .+ +...++         ..+.....+||+.||+++.++ .+++|||||++|...    +.+++..+.   ++...+..+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~~~~~l~~ir~~~~~~~~~~~G  174 (262)
T 2qjc_A           95 KKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQYEDEVTTMRNLIEKEQEATGG  174 (262)
T ss_dssp             ------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGCCHHHHHHCCEEEEC-------
T ss_pred             ccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccCCHHHHhhhhhcccccccCCCC
Confidence            32 122221         234466778999999998876 589999999998763    223332222   111111111


Q ss_pred             hhhhhhhcCCCCC-CCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEEecCCeEEEEecCCCCCCCCCC
Q 024549          142 LLCDLLWADPDKD-IEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDN  220 (266)
Q Consensus       142 ~~~dllWsdp~~~-~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n  220 (266)
                      .  .++|+||... ...|..+.                  .+.+.||.||+++. ++....++.++.|-+..-|    ++
T Consensus       175 ~--~~~~~d~~~~~~~~w~~~~------------------~g~~~vvfGHt~~~-~~~~~~~~~~i~IDtG~~~----gG  229 (262)
T 2qjc_A          175 V--TLTATEETNDGGKPWASMW------------------RGPETVVFGHDARR-GLQEQYKPLAIGLDSRCVY----GG  229 (262)
T ss_dssp             C--CEEEESCSTTCCEEGGGGC------------------CCSSEEEECCCGGG-CCBCTTTTTEEECCCBGGG----TS
T ss_pred             c--cccccCCCCcCCCChhhcc------------------CCCCEEEECCCccc-cccccCCCCEEEeeCcccc----CC
Confidence            1  3678877321 11222221                  24677899999874 4433221256666655433    23


Q ss_pred             cEEEEEEcCC
Q 024549          221 AGAMMSVDDT  230 (266)
Q Consensus       221 ~ga~l~i~~~  230 (266)
                      .=+++.+++.
T Consensus       230 ~Lt~l~l~~~  239 (262)
T 2qjc_A          230 RLSAAVFPGG  239 (262)
T ss_dssp             EEEEEEETTT
T ss_pred             eeEEEEEcCC
Confidence            4456677764


No 12 
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.88  E-value=3.3e-23  Score=177.10  Aligned_cols=155  Identities=21%  Similarity=0.289  Sum_probs=109.7

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCC-CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCCh
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY   79 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~   79 (266)
                      +++||||||++.+|.++|+.++.+ ..+.+||+||++|||+++.+++.+|.      +.++++++||||.+.++..+++.
T Consensus        15 i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~------~~~~~~v~GNhd~~~~~~~~~~~   88 (221)
T 1g5b_A           15 IWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELIT------FPWFRAVRGNHEQMMIDGLSERG   88 (221)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGG------STTEEECCCHHHHHHHHHHSTTC
T ss_pred             EEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHh------cCCEEEEccCcHHHHHhhhccCC
Confidence            367889999999999999998875 56889999999999999999987763      24799999999998765432221


Q ss_pred             HHHHH---------h---hchhhHhhhhhhhccCCeEEEE---cCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhh
Q 024549           80 DECKR---------R---FNVRVWKTFTDCFNCLPVAALV---DEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLC  144 (266)
Q Consensus        80 ~e~~~---------~---~~~~~~~~~~~~~~~LPl~~~i---~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~  144 (266)
                      .....         .   ...++.+.+.+||+.||.+..+   +.+++|||||+++....      ..+|..      ..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~------~~~~~~------~~  156 (221)
T 1g5b_A           89 NVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYE------FGKPVD------HQ  156 (221)
T ss_dssp             CCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCC------TTCCCC------HH
T ss_pred             cHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhcc------cCCCcc------cc
Confidence            10000         0   1124557788999999999876   45899999998764311      112221      25


Q ss_pred             hhhhcCCCCCCCCCccCCCCceeecChhHHHHHHH-----HCCCceEEeeeeeec
Q 024549          145 DLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQ-----KHDLDLICRAHQVVE  194 (266)
Q Consensus       145 dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~-----~~~~~~iIrgH~~~~  194 (266)
                      +++|+++..                     .+..+     ..+.+.+|.||++++
T Consensus       157 ~~lw~~~~~---------------------~~~~~~~~~~~~~~~~vv~GHth~~  190 (221)
T 1g5b_A          157 QVIWNRERI---------------------SNSQNGIVKEIKGADTFIFGHTPAV  190 (221)
T ss_dssp             HHHHCCHHH---------------------HHHHTTCCCCCBTSSEEEECSSCCS
T ss_pred             ccccCchhh---------------------hhhccccCCcccCCCEEEECCCCCc
Confidence            788987631                     11111     346788999999986


No 13 
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.77  E-value=3e-18  Score=148.62  Aligned_cols=187  Identities=18%  Similarity=0.199  Sum_probs=126.3

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcC--C
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG--F   78 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~g--f   78 (266)
                      |++||||||++.+|.++++.+.  ..+.++++||++|+|+++.+++.++..++     .+++++||||.........  +
T Consensus         6 i~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~~~~~   78 (246)
T 3rqz_A            6 ILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACIGRLSLDEF   78 (246)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHTCCCCCC--
T ss_pred             EEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHhccCCcccc
Confidence            3677899999999999999887  67889999999999999999999998774     3789999999876543211  1


Q ss_pred             ---hHHHHHhhchhhHhhhhhhhccCCeEEEEcCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCC
Q 024549           79 ---YDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI  155 (266)
Q Consensus        79 ---~~e~~~~~~~~~~~~~~~~~~~LPl~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~  155 (266)
                         ...........+.....+|++.||..... ++++++||++....                         |       
T Consensus        79 ~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~-~~i~~~Hg~p~~~~-------------------------~-------  125 (246)
T 3rqz_A           79 NPVARFASYWTTMQLQAEHLQYLESLPNRMID-GDWTVVHGSPRHPI-------------------------W-------  125 (246)
T ss_dssp             CGGGGCHHHHHHHHCCHHHHHHHHHCCSEEEE-TTEEEESSCSSSTT-------------------------T-------
T ss_pred             CHHHHHHHHHHHHHcCHHHHHHHHhCCcEEEE-CCEEEEECCcCCcc-------------------------c-------
Confidence               11111222334556677899999998664 48999999864311                         0       


Q ss_pred             CCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEE--------------------ecCCeEEEEecCCCCC
Q 024549          156 EGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEF--------------------FAKRQLVTVFSAPNYC  215 (266)
Q Consensus       156 ~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~--------------------~~~~~~itifSa~~y~  215 (266)
                                .+.+....+.+.+++.+.+++|.||+..+.-+..                    ..+..++..-|.- ..
T Consensus       126 ----------~~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG-~P  194 (246)
T 3rqz_A          126 ----------EYIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVG-QP  194 (246)
T ss_dssp             ----------CCCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSS-CC
T ss_pred             ----------cccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeecCCCeEEEECCccC-CC
Confidence                      0112345667778888999999999997654431                    1134455555542 21


Q ss_pred             CCCCCcEEEEEEcCCC-ceEEEEE
Q 024549          216 GEFDNAGAMMSVDDTL-TCSFQIL  238 (266)
Q Consensus       216 ~~~~n~ga~l~i~~~~-~~~~~~~  238 (266)
                      ....+.++++.++.+. .++|+.+
T Consensus       195 rdg~p~A~Y~i~d~~~~~v~~~rv  218 (246)
T 3rqz_A          195 RDGDPRASYAIFEPDAQRVTFHRV  218 (246)
T ss_dssp             CSSCCSEEEEEEEGGGTEEEEEEE
T ss_pred             CCcCCcceEEEEECCCCEEEEEEe
Confidence            1223567777776543 4555443


No 14 
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.77  E-value=1.3e-17  Score=144.35  Aligned_cols=195  Identities=12%  Similarity=0.075  Sum_probs=122.1

Q ss_pred             CEEEEccCCCHHHHHHHHHhcC---CC--CCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhh
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGG---YP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRI   75 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~---~~--~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~   75 (266)
                      +++|||+||++..|.++++.+.   ..  ..+.+|++||++|+|+.+.+++.+|..++..  ..+++++||||.+.....
T Consensus         4 i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~--~~~~~v~GNhD~~~~~~~   81 (252)
T 1nnw_A            4 VAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKK--ENVKIIRGKYDQIIAMSD   81 (252)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHH--SCEEEECCHHHHHHHHSC
T ss_pred             EEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhh--cCeeEEecchHHHhhccc
Confidence            3678899999999999998765   43  4688999999999999999999999887642  359999999998765421


Q ss_pred             cC-----------Ch---HHHHHhhchhhHhhhhhhhccCCeEEEE--cC-cEEEecCCCCCCCCCHHHHhcccCCCCCC
Q 024549           76 YG-----------FY---DECKRRFNVRVWKTFTDCFNCLPVAALV--DE-KILCMHGGLSPDLKNLDQIRNIARPVDVP  138 (266)
Q Consensus        76 ~g-----------f~---~e~~~~~~~~~~~~~~~~~~~LPl~~~i--~~-~~l~vHgGi~p~~~~l~~i~~i~r~~~~~  138 (266)
                      ..           +.   ..........+.....+|++.+|....+  ++ +++++||++....                
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~----------------  145 (252)
T 1nnw_A           82 PHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPF----------------  145 (252)
T ss_dssp             TTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTT----------------
T ss_pred             cccCCcccccchhhhHHHHHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCc----------------
Confidence            11           00   0111111223445567889999987654  33 7999999862111                


Q ss_pred             CcchhhhhhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHC-CCceEEeeeeeeccCeEEecCCeE-EEEecCCCCCC
Q 024549          139 DQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKH-DLDLICRAHQVVEDGYEFFAKRQL-VTVFSAPNYCG  216 (266)
Q Consensus       139 ~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~-~~~~iIrgH~~~~~G~~~~~~~~~-itifSa~~y~~  216 (266)
                           .+.+|.+                  -+.+.+.+.++.. +++++|.||+..+....  .++.+ +.. .|..+..
T Consensus       146 -----~~~~~~~------------------~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--~~~~~~in~-Gs~~~~~  199 (252)
T 1nnw_A          146 -----DGEVLAE------------------QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--TRYGRVVCP-GSVGFPP  199 (252)
T ss_dssp             -----TCCCCSS------------------CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--ETTEEEEEE-CCSSSCS
T ss_pred             -----ccccCCC------------------CCHHHHHHHHhcCCCCCEEEECCccccceEe--cCCeEEEEC-CCccCCC
Confidence                 0000100                  1235567777777 99999999999865443  24433 222 2222211


Q ss_pred             CCCCcEEEEEEcCC-CceEEEEEe
Q 024549          217 EFDNAGAMMSVDDT-LTCSFQILK  239 (266)
Q Consensus       217 ~~~n~ga~l~i~~~-~~~~~~~~~  239 (266)
                      .....++++.++.+ ..+.+..+.
T Consensus       200 ~~~~~~~y~il~~~~~~v~~~~v~  223 (252)
T 1nnw_A          200 GKEHKATFALVDVDTLKPKFIEVE  223 (252)
T ss_dssp             SSSCCEEEEEEETTTCCEEEEEEC
T ss_pred             CCCCcceEEEEECCCCeEEEEEeC
Confidence            11224666666543 455555443


No 15 
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.76  E-value=6.9e-18  Score=148.72  Aligned_cols=113  Identities=14%  Similarity=0.100  Sum_probs=86.3

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhh---cC
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRI---YG   77 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~---~g   77 (266)
                      |++|+||||++.+|.++|+.+...+.+.+|++||++++|+++.+++.+|.+++     .+++++||||...+...   ++
T Consensus        14 i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~~~~~   88 (270)
T 3qfm_A           14 IALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWHGVRKELD   88 (270)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHHHHTTCSC
T ss_pred             EEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHHhhccccC
Confidence            35778999999999999998876678899999999999999999999997662     58999999999876532   22


Q ss_pred             ChHHHH------Hhh-chhhHhhhhhhhccCCeEEEE--cC-cEEEecCCC
Q 024549           78 FYDECK------RRF-NVRVWKTFTDCFNCLPVAALV--DE-KILCMHGGL  118 (266)
Q Consensus        78 f~~e~~------~~~-~~~~~~~~~~~~~~LPl~~~i--~~-~~l~vHgGi  118 (266)
                      +.....      ..| ...+.....+|++.||....+  ++ +++++||.+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p  139 (270)
T 3qfm_A           89 STRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLP  139 (270)
T ss_dssp             TTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBT
T ss_pred             CCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCC
Confidence            322111      111 234556678999999998755  33 799999754


No 16 
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.34  E-value=6.2e-12  Score=105.85  Aligned_cols=70  Identities=7%  Similarity=0.140  Sum_probs=53.2

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECAS   71 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~   71 (266)
                      |++|+|+|++...+.++++.+.....+.+|++||++|+|+.+.+...++..|+. .+..+++++||||...
T Consensus         8 i~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~-~~~pv~~v~GNHD~~~   77 (228)
T 1uf3_A            8 ILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSE-AHLPTAYVPGPQDAPI   77 (228)
T ss_dssp             EEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGG-GCSCEEEECCTTSCSH
T ss_pred             EEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEECCCCCchh
Confidence            367889999999999888765433567899999999999766655455544543 2446999999999864


No 17 
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.26  E-value=4.2e-11  Score=99.82  Aligned_cols=62  Identities=16%  Similarity=0.158  Sum_probs=49.0

Q ss_pred             EEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccch
Q 024549            2 IYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI   72 (266)
Q Consensus         2 i~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~   72 (266)
                      ++|+|+||++..+.++++.+.....+.++++||++|.     +++..+..+    +..+++++||||....
T Consensus        29 ~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~   90 (190)
T 1s3l_A           29 GIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC   90 (190)
T ss_dssp             EEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred             EEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence            5777999999999999988654567889999999984     555555432    4579999999998754


No 18 
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.19  E-value=7.5e-10  Score=93.80  Aligned_cols=117  Identities=18%  Similarity=0.266  Sum_probs=78.6

Q ss_pred             EEEEccCCCHH------HHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhh
Q 024549            2 IYDCDVHGQFS------DLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRI   75 (266)
Q Consensus         2 i~IgDiHG~~~------~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~   75 (266)
                      ++|+|+|+++.      .|.++++   ....+.++++||++|     .+++.+|..+    +..+++++||||.......
T Consensus        29 ~~iSD~H~~~~~~~l~~~l~~~~~---~~~~D~vi~~GDl~~-----~~~l~~l~~~----~~~v~~V~GNHD~~~~~~~   96 (215)
T 2a22_A           29 LLIGDLKIPYGAKELPSNFRELLA---TDKINYVLCTGNVCS-----QEYVEMLKNI----TKNVYIVSGDLDSAIFNPD   96 (215)
T ss_dssp             EEECCCCTTTTCSSCCGGGHHHHH---CTTCCEEEECSCCCC-----HHHHHHHHHH----CSCEEECCCTTCCSCCBCC
T ss_pred             EEEecCCCCCChHHHHHHHHHHHh---cCCCCEEEECCCCCC-----HHHHHHHHHc----CCCEEEecCCCcCcccccC
Confidence            57789999863      3334433   244688999999997     5777777654    3369999999998754310


Q ss_pred             cCChHHHHHhhchhhHhhhhhhhccCCeEEEE--c-CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCC
Q 024549           76 YGFYDECKRRFNVRVWKTFTDCFNCLPVAALV--D-EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPD  152 (266)
Q Consensus        76 ~gf~~e~~~~~~~~~~~~~~~~~~~LPl~~~i--~-~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~  152 (266)
                                         .+|+..+|....+  + .+++++||.+...                          |    
T Consensus        97 -------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~~~--------------------------~----  127 (215)
T 2a22_A           97 -------------------PESNGVFPEYVVVQIGEFKIGLMHGNQVLP--------------------------W----  127 (215)
T ss_dssp             -------------------GGGTBCCCSEEEEEETTEEEEEECSTTSSS--------------------------T----
T ss_pred             -------------------hhhHhhCCceEEEecCCeEEEEEcCCccCC--------------------------C----
Confidence                               1355677765443  2 3799999854210                          0    


Q ss_pred             CCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeecc
Q 024549          153 KDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVED  195 (266)
Q Consensus       153 ~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~  195 (266)
                                      .+.+.+.++++..++++++.||+..+.
T Consensus       128 ----------------~~~~~l~~~~~~~~~d~vl~GHtH~~~  154 (215)
T 2a22_A          128 ----------------DDPGSLEQWQRRLDCDILVTGHTHKLR  154 (215)
T ss_dssp             ----------------TCHHHHHHHHHHHTCSEEEECSSCCCE
T ss_pred             ----------------CCHHHHHHHHhhcCCCEEEECCcCCCc
Confidence                            133456677777899999999998753


No 19 
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.18  E-value=3e-10  Score=93.09  Aligned_cols=107  Identities=18%  Similarity=0.126  Sum_probs=73.6

Q ss_pred             EEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccchhhhcCChHH
Q 024549            2 IYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE   81 (266)
Q Consensus         2 i~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e   81 (266)
                      ++|+|+||++..+.++++.+.. ..+.++++||+..      +++.   .+   .. .+++++||||....         
T Consensus        10 ~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~------~~l~---~l---~~-~~~~v~GNhD~~~~---------   66 (176)
T 3ck2_A           10 IVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSEL------RPDS---PL---WE-GIRVVKGNMDFYAG---------   66 (176)
T ss_dssp             EEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCS------CTTC---GG---GT-TEEECCCTTCCSTT---------
T ss_pred             EEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCch------HHHH---hh---hC-CeEEecCcccchhc---------
Confidence            5778999999999999998754 6688999999721      2221   22   12 69999999997531         


Q ss_pred             HHHhhchhhHhhhhhhhccCCeEE--EE-cCcEEEecCCCCCCCCCHHHHhcccCCCCCCCcchhhhhhhcCCCCCCCCC
Q 024549           82 CKRRFNVRVWKTFTDCFNCLPVAA--LV-DEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGW  158 (266)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~LPl~~--~i-~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~  158 (266)
                                         +|...  .+ +.+++++||.+...                          |          
T Consensus        67 -------------------~p~~~~~~~~~~~i~~~Hg~~~~~--------------------------~----------   91 (176)
T 3ck2_A           67 -------------------YPERLVTELGSTKIIQTHGHLFDI--------------------------N----------   91 (176)
T ss_dssp             -------------------CCSEEEEEETTEEEEEECSGGGTT--------------------------T----------
T ss_pred             -------------------CCcEEEEEECCeEEEEECCCccCC--------------------------C----------
Confidence                               12111  12 34799999954210                          0          


Q ss_pred             ccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccC
Q 024549          159 GENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDG  196 (266)
Q Consensus       159 ~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G  196 (266)
                                .+.+.+.++++..++++++.||+..+..
T Consensus        92 ----------~~~~~l~~~~~~~~~d~vi~GHtH~~~~  119 (176)
T 3ck2_A           92 ----------FNFQKLDYWAQEEEAAICLYGHLHVPSA  119 (176)
T ss_dssp             ----------TCSHHHHHHHHHTTCSEEECCSSCCEEE
T ss_pred             ----------CCHHHHHHHHHhcCCCEEEECCcCCCCc
Confidence                      1335677778889999999999997543


No 20 
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.18  E-value=4.6e-11  Score=98.62  Aligned_cols=59  Identities=25%  Similarity=0.365  Sum_probs=46.6

Q ss_pred             EEEEccCC--CHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549            2 IYDCDVHG--QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA   70 (266)
Q Consensus         2 i~IgDiHG--~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~   70 (266)
                      ++|+|+||  +..+|.++++.+. .+.+.++++||++|+     +++++|..+.    ..+++++||||..
T Consensus        26 ~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~   86 (178)
T 2kkn_A           26 LLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP   86 (178)
T ss_dssp             EEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred             EEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence            57779997  7778888887754 556889999999983     7777776552    3699999999975


No 21 
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.15  E-value=4.8e-11  Score=100.81  Aligned_cols=66  Identities=20%  Similarity=0.359  Sum_probs=54.8

Q ss_pred             EEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCC--------CcHHHHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549            2 IYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGK--------QSIETICLLLAYKVKYKENFFLLRGNHECAS   71 (266)
Q Consensus         2 i~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~--------~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~   71 (266)
                      ++|+|+||++..+.++++.+.....+.++++||++|+|+        .+.+++.++..+.    ..+++++||||...
T Consensus        29 ~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNHD~~~  102 (208)
T 1su1_A           29 MFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVRGNCDSEV  102 (208)
T ss_dssp             EEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECCCTTCCHH
T ss_pred             EEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEECCCchHH
Confidence            577899999999999998765445688999999999998        3688888887664    37999999999864


No 22 
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.15  E-value=2.8e-10  Score=98.00  Aligned_cols=70  Identities=9%  Similarity=0.049  Sum_probs=51.4

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCcH--------------------------HHHHHHHHhhh
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI--------------------------ETICLLLAYKV   54 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~--------------------------evl~~l~~lk~   54 (266)
                      |++|+|+|++...+.++++.+.....+.+|++||++|+|+.+.                          +...++..|+.
T Consensus         8 i~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~l~~   87 (260)
T 2yvt_A            8 VLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFREIGE   87 (260)
T ss_dssp             EEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHHHHh
Confidence            3678899999999999888764445688999999999997531                          23333333432


Q ss_pred             hcCCcEEEEcCCccccc
Q 024549           55 KYKENFFLLRGNHECAS   71 (266)
Q Consensus        55 ~~p~~v~~lrGNHE~~~   71 (266)
                       .+..+++++||||...
T Consensus        88 -~~~pv~~v~GNHD~~~  103 (260)
T 2yvt_A           88 -LGVKTFVVPGKNDAPL  103 (260)
T ss_dssp             -TCSEEEEECCTTSCCH
T ss_pred             -cCCcEEEEcCCCCchh
Confidence             2457999999999864


No 23 
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.09  E-value=1.9e-09  Score=89.50  Aligned_cols=61  Identities=16%  Similarity=0.134  Sum_probs=42.0

Q ss_pred             EEEEccCCCHH--HHHHHHH-hcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549            2 IYDCDVHGQFS--DLLRLFE-YGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECAS   71 (266)
Q Consensus         2 i~IgDiHG~~~--~l~~~l~-~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~   71 (266)
                      ++|+|+|++..  ++.+.+. .+.....+.++++||++|     .+++.+|..+    +..+++++||||...
T Consensus        14 ~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~-----~~~~~~l~~~----~~~~~~v~GNhD~~~   77 (192)
T 1z2w_A           14 LVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-----KESYDYLKTL----AGDVHIVRGDFDENL   77 (192)
T ss_dssp             EEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-----HHHHHHHHHH----CSEEEECCCTTCCCT
T ss_pred             EEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC-----HHHHHHHHhc----CCCEEEEcCCcCccc
Confidence            57789999753  2333333 233345688999999997     5777776554    236999999999864


No 24 
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.03  E-value=4.8e-09  Score=93.09  Aligned_cols=70  Identities=20%  Similarity=0.250  Sum_probs=47.9

Q ss_pred             CEEEEccCCC------------HHHHHHHHHhcCC--CCCceEEEeCCcccCCCCc-HH-HHHHHHHhhhhcCCcEEEEc
Q 024549            1 MIYDCDVHGQ------------FSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQS-IE-TICLLLAYKVKYKENFFLLR   64 (266)
Q Consensus         1 ii~IgDiHG~------------~~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~s-~e-vl~~l~~lk~~~p~~v~~lr   64 (266)
                      +++|+|+|..            ...|.++++.+.-  ...+.+|++||++|.|... .+ +..++..+....+..+++++
T Consensus        28 i~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~~v~  107 (330)
T 3ib7_A           28 LLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVM  107 (330)
T ss_dssp             EEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEECC
T ss_pred             EEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEeC
Confidence            3677899962            6788888887654  4567899999999998742 22 22233333222355799999


Q ss_pred             CCcccc
Q 024549           65 GNHECA   70 (266)
Q Consensus        65 GNHE~~   70 (266)
                      ||||..
T Consensus       108 GNHD~~  113 (330)
T 3ib7_A          108 GNHDDR  113 (330)
T ss_dssp             CTTSCH
T ss_pred             CCCCCH
Confidence            999973


No 25 
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.02  E-value=6.1e-10  Score=92.62  Aligned_cols=133  Identities=17%  Similarity=0.141  Sum_probs=81.1

Q ss_pred             EEEEccCCCHHHH-------------HHHHHhcC--CCCCceEEEeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCC
Q 024549            2 IYDCDVHGQFSDL-------------LRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGN   66 (266)
Q Consensus         2 i~IgDiHG~~~~l-------------~~~l~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGN   66 (266)
                      ++|+|+|+....+             .++++.+.  ....+.++++||++++|+...+++.++..+    +..+++++||
T Consensus         5 ~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l----~~~~~~v~GN   80 (195)
T 1xm7_A            5 YFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKAL----PGRKILVMGN   80 (195)
T ss_dssp             EEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHS----SSEEEEECCT
T ss_pred             EEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHC----CCCEEEEeCC
Confidence            5778999644322             22333322  245688999999999997777888877665    3469999999


Q ss_pred             ccccchhhhcCChHHHHHhhchhhHhhhhhhhccCCeEEE---Ec-CcEEEecCCCCCCCCCHHHHhcccCCCCCCCcch
Q 024549           67 HECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAAL---VD-EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGL  142 (266)
Q Consensus        67 HE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~LPl~~~---i~-~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~  142 (266)
                      ||.....            +. ..|       ..+|-...   ++ .+++++||-+.+..                    
T Consensus        81 hD~~~~~------------~~-~~~-------~~l~~~~~l~~~~~~~i~~~H~~~~~~~--------------------  120 (195)
T 1xm7_A           81 HDKDKES------------LK-EYF-------DEIYDFYKIIEHKGKRILLSHYPAKDPI--------------------  120 (195)
T ss_dssp             TCCCHHH------------HT-TTC-------SEEESSEEEEEETTEEEEEESSCSSCSS--------------------
T ss_pred             CCCchhh------------hh-hhh-------hchhHHHHHHhcCCcEEEEEccCCcCCC--------------------
Confidence            9986421            00 001       11221111   22 36999998332100                    


Q ss_pred             hhhhhhcCCCCCCCCCccCCCCceeecChhHHHHHHHHCCCceEEeeeeeeccCeEE
Q 024549          143 LCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEF  199 (266)
Q Consensus       143 ~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iIrgH~~~~~G~~~  199 (266)
                             +.     .+         ..+.+.+.+.+++.+++++|.||+..+.....
T Consensus       121 -------~~-----~~---------~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~~  156 (195)
T 1xm7_A          121 -------TE-----RY---------PDRQEMVREIYFKENCDLLIHGHVHWNREGIK  156 (195)
T ss_dssp             -------CC-----SC---------HHHHHHHHHHHHHTTCSEEEECCCCCCSCC--
T ss_pred             -------cc-----cc---------cchHHHHHHHHHHcCCcEEEECCcCCCCcccc
Confidence                   00     00         12456778888889999999999998765543


No 26 
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=98.87  E-value=5.8e-08  Score=83.69  Aligned_cols=66  Identities=17%  Similarity=0.157  Sum_probs=46.1

Q ss_pred             CEEEEccCCCH------------HHHHHHHHhcCC--CCCceEEEeCCcccCCCCcH--HHHHHHHHhhhhcCCcEEEEc
Q 024549            1 MIYDCDVHGQF------------SDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSI--ETICLLLAYKVKYKENFFLLR   64 (266)
Q Consensus         1 ii~IgDiHG~~------------~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~s~--evl~~l~~lk~~~p~~v~~lr   64 (266)
                      |++|+|+|+..            ..|.++++.+.-  +..+.+|++||+++.|..+.  ++...+..    .+..++.++
T Consensus         3 i~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~----l~~p~~~v~   78 (274)
T 3d03_A            3 LAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGS----LNYPLYLIP   78 (274)
T ss_dssp             EEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTT----CSSCEEEEC
T ss_pred             EEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHh----cCCCEEEEC
Confidence            35777999984            678888887543  24578899999999887432  22222222    234699999


Q ss_pred             CCcccc
Q 024549           65 GNHECA   70 (266)
Q Consensus        65 GNHE~~   70 (266)
                      ||||..
T Consensus        79 GNHD~~   84 (274)
T 3d03_A           79 GNHDDK   84 (274)
T ss_dssp             CTTSCH
T ss_pred             CCCCCH
Confidence            999984


No 27 
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=98.80  E-value=2.2e-08  Score=88.96  Aligned_cols=61  Identities=21%  Similarity=0.214  Sum_probs=43.0

Q ss_pred             CEEEEccCCCHHHHHHHHHhcCCCCCceEEEeCCcccCCCCc--HHHHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549            1 MIYDCDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS--IETICLLLAYKVKYKENFFLLRGNHECAS   71 (266)
Q Consensus         1 ii~IgDiHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~lrGNHE~~~   71 (266)
                      |++|+|+||+...+       .++..|.+|++||++|+|...  .+++.+|..+   ....++++.||||...
T Consensus        62 i~~iSD~H~~~~~l-------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l---~~~~v~~V~GNHD~~~  124 (296)
T 3rl5_A           62 FVCISDTRSRTDGI-------QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNL---PYEYKIVIAGNHELTF  124 (296)
T ss_dssp             EEEEBCCTTCCTTC-------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTS---CCSEEEECCCTTCGGG
T ss_pred             EEEEeeCCCCcchh-------ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhC---CCCeEEEEcCCccccc
Confidence            46788999997653       346678899999999999732  2234444333   1135899999999864


No 28 
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=98.62  E-value=3.8e-07  Score=84.69  Aligned_cols=60  Identities=17%  Similarity=0.168  Sum_probs=39.1

Q ss_pred             HHHHHHHHHhcCCCCCceEEEeCCcccCCCCc--HHHHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549           11 FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS--IETICLLLAYKVKYKENFFLLRGNHECAS   71 (266)
Q Consensus        11 ~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~lrGNHE~~~   71 (266)
                      ...+.++++.+.....+.+|++||+++.|...  .++...+..+. ..+..++.++||||...
T Consensus        78 ~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~-~~~~~~~~v~GNHD~~~  139 (443)
T 2xmo_A           78 DEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEELAKKLTQVE-KNGTQVFVVPGNHDINN  139 (443)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEEESCCBSSCCHHHHHHHHHHHHHHH-HTTCEEEEECCTTTSSC
T ss_pred             HHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH-hCCCeEEEECCcCCCCC
Confidence            44667776655434457889999999988743  22333333332 12457999999999854


No 29 
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=98.20  E-value=1.2e-06  Score=78.59  Aligned_cols=69  Identities=22%  Similarity=0.263  Sum_probs=44.6

Q ss_pred             CEEEEccC-C----C-----------HHHHHHHHHhcCCCCCceEEEeCC-cccCCCCcHHH----HHHHHHhhhhcCCc
Q 024549            1 MIYDCDVH-G----Q-----------FSDLLRLFEYGGYPPEANYLFLGD-YVDRGKQSIET----ICLLLAYKVKYKEN   59 (266)
Q Consensus         1 ii~IgDiH-G----~-----------~~~l~~~l~~~~~~~~~~~vfLGD-~vDrG~~s~ev----l~~l~~lk~~~p~~   59 (266)
                      ++.++|+| |    .           ...|.++++.+.-...+-+|+.|| ++|++..+.+.    ..++..|+..  ..
T Consensus        21 ilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~~--~p   98 (336)
T 2q8u_A           21 ILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT--AP   98 (336)
T ss_dssp             EEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHH--SC
T ss_pred             EEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHhc--CC
Confidence            36788999 8    3           455677776654445678999999 99999887764    3444444422  46


Q ss_pred             EEEEcCCccccc
Q 024549           60 FFLLRGNHECAS   71 (266)
Q Consensus        60 v~~lrGNHE~~~   71 (266)
                      ++++.||||...
T Consensus        99 v~~i~GNHD~~~  110 (336)
T 2q8u_A           99 VVVLPGNHDWKG  110 (336)
T ss_dssp             EEECCC------
T ss_pred             EEEECCCCCccc
Confidence            999999999864


No 30 
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=98.11  E-value=3.2e-06  Score=77.47  Aligned_cols=70  Identities=13%  Similarity=0.132  Sum_probs=49.1

Q ss_pred             CEEEEccCCCH-------------HHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHH----HHHHHHhhhhcCCcEEEE
Q 024549            1 MIYDCDVHGQF-------------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIET----ICLLLAYKVKYKENFFLL   63 (266)
Q Consensus         1 ii~IgDiHG~~-------------~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~ev----l~~l~~lk~~~p~~v~~l   63 (266)
                      |+.++|+|+..             ..|.++++.+.-...+.+|+.||++|++..+.+.    ...|..|+. .+..++++
T Consensus        23 ilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~-~~~pv~~v  101 (386)
T 3av0_A           23 FVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE-NNIKVYIV  101 (386)
T ss_dssp             EEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH-TTCEEEEC
T ss_pred             EEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-cCCcEEEE
Confidence            35677999763             4577787776555678899999999999555443    333333332 24579999


Q ss_pred             cCCccccc
Q 024549           64 RGNHECAS   71 (266)
Q Consensus        64 rGNHE~~~   71 (266)
                      .||||...
T Consensus       102 ~GNHD~~~  109 (386)
T 3av0_A          102 AGNHEMPR  109 (386)
T ss_dssp             CCGGGSCS
T ss_pred             cCCCCCCc
Confidence            99999864


No 31 
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=98.07  E-value=1.4e-06  Score=76.35  Aligned_cols=70  Identities=19%  Similarity=0.035  Sum_probs=47.8

Q ss_pred             CEEEEccCCCH-------------------HHHHHHHHhcCCCCCceEEEeCCcccCCCC----cHHHHHHHHHhhhhcC
Q 024549            1 MIYDCDVHGQF-------------------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQ----SIETICLLLAYKVKYK   57 (266)
Q Consensus         1 ii~IgDiHG~~-------------------~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~----s~evl~~l~~lk~~~p   57 (266)
                      +++|+|+|...                   ..|.++++.+.-...+.+|++||+++.+..    +.+.+..++.+-...+
T Consensus         8 i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l~~~~   87 (322)
T 2nxf_A            8 FGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACS   87 (322)
T ss_dssp             EEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred             EEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHHHhcC
Confidence            36778999876                   567777766544556789999999998852    2333333333222235


Q ss_pred             CcEEEEcCCcccc
Q 024549           58 ENFFLLRGNHECA   70 (266)
Q Consensus        58 ~~v~~lrGNHE~~   70 (266)
                      ..+++++||||..
T Consensus        88 ~p~~~v~GNHD~~  100 (322)
T 2nxf_A           88 VDVHHVWGNHEFY  100 (322)
T ss_dssp             SEEEECCCHHHHH
T ss_pred             CcEEEecCCCCcc
Confidence            6799999999985


No 32 
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.07  E-value=4e-06  Score=75.12  Aligned_cols=69  Identities=20%  Similarity=0.189  Sum_probs=47.0

Q ss_pred             CEEEEccCCCH-------------HHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHH----HHHhhhhcCCcEEEE
Q 024549            1 MIYDCDVHGQF-------------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICL----LLAYKVKYKENFFLL   63 (266)
Q Consensus         1 ii~IgDiHG~~-------------~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~----l~~lk~~~p~~v~~l   63 (266)
                      ++.++|+|...             ..|.++++.+.-...+.+|+.||++|++..+.+.+..    +..|+. .+..++++
T Consensus         3 ilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~~~~v~~v   81 (333)
T 1ii7_A            3 FAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKE-HSIPVFAI   81 (333)
T ss_dssp             EEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-TTCCEEEE
T ss_pred             EEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-CCCcEEEe
Confidence            35678999874             4566666665445568899999999998555444333    223321 24569999


Q ss_pred             cCCcccc
Q 024549           64 RGNHECA   70 (266)
Q Consensus        64 rGNHE~~   70 (266)
                      .||||..
T Consensus        82 ~GNHD~~   88 (333)
T 1ii7_A           82 EGNHDRT   88 (333)
T ss_dssp             CCTTTCC
T ss_pred             CCcCCCc
Confidence            9999985


No 33 
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=98.00  E-value=4.2e-05  Score=66.55  Aligned_cols=70  Identities=16%  Similarity=0.013  Sum_probs=39.1

Q ss_pred             CEEEEccCCCH---------HHHHHHHHh-cCCCCCceEEEeCCcccC-CC---CcHHHHHHHHHhh--hhc-CCcEEEE
Q 024549            1 MIYDCDVHGQF---------SDLLRLFEY-GGYPPEANYLFLGDYVDR-GK---QSIETICLLLAYK--VKY-KENFFLL   63 (266)
Q Consensus         1 ii~IgDiHG~~---------~~l~~~l~~-~~~~~~~~~vfLGD~vDr-G~---~s~evl~~l~~lk--~~~-p~~v~~l   63 (266)
                      +++|||+|...         .++.+.+.. +.....+-+|++||+++. |.   ...+....+..+.  ... +..++.+
T Consensus         9 ~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p~~~v   88 (313)
T 1ute_A            9 FVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVL   88 (313)
T ss_dssp             EEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEEEC
T ss_pred             EEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCCEEEE
Confidence            36788999863         234333332 222345778999999743 11   1123223222111  012 4579999


Q ss_pred             cCCcccc
Q 024549           64 RGNHECA   70 (266)
Q Consensus        64 rGNHE~~   70 (266)
                      +||||..
T Consensus        89 ~GNHD~~   95 (313)
T 1ute_A           89 AGNHDHL   95 (313)
T ss_dssp             CCHHHHH
T ss_pred             CCCCccC
Confidence            9999985


No 34 
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=97.62  E-value=2.2e-05  Score=71.81  Aligned_cols=68  Identities=19%  Similarity=0.215  Sum_probs=46.8

Q ss_pred             CEEEEccCCCHH----------------HHHHHHHhcCCCCCceEEEeCCcc-cCCCCcHHHHHH----HHHhhhhcCCc
Q 024549            1 MIYDCDVHGQFS----------------DLLRLFEYGGYPPEANYLFLGDYV-DRGKQSIETICL----LLAYKVKYKEN   59 (266)
Q Consensus         1 ii~IgDiHG~~~----------------~l~~~l~~~~~~~~~~~vfLGD~v-DrG~~s~evl~~----l~~lk~~~p~~   59 (266)
                      ++.++|+|....                .|.++++.+.-...+.+|+.||++ |++..+.+.+..    +..|+..  ..
T Consensus         3 ilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~--~~   80 (379)
T 3tho_B            3 ILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT--AP   80 (379)
T ss_dssp             EEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH--SC
T ss_pred             EEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC--CC
Confidence            367789997654                556666554444567899999999 988777654433    3334322  47


Q ss_pred             EEEEcCCcccc
Q 024549           60 FFLLRGNHECA   70 (266)
Q Consensus        60 v~~lrGNHE~~   70 (266)
                      ++++.||||..
T Consensus        81 v~~i~GNHD~~   91 (379)
T 3tho_B           81 VVVLPGNQDWK   91 (379)
T ss_dssp             EEECCCTTSCT
T ss_pred             EEEEcCCCccc
Confidence            99999999954


No 35 
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=97.58  E-value=5.5e-05  Score=70.37  Aligned_cols=71  Identities=23%  Similarity=0.270  Sum_probs=51.5

Q ss_pred             CEEEEccCCCH------------HHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHHHhhhh-------------
Q 024549            1 MIYDCDVHGQF------------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVK-------------   55 (266)
Q Consensus         1 ii~IgDiHG~~------------~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~-------------   55 (266)
                      |+.++|+|-..            ..|.++++.+.-...+.+|+.||++|++..+.+++..++.+-.+             
T Consensus        35 ilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~~~~~~l  114 (431)
T 3t1i_A           35 ILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQFEIL  114 (431)
T ss_dssp             EEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSCCCCEEC
T ss_pred             EEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCcccceec
Confidence            35677999542            36677776655566788999999999999888876665543221             


Q ss_pred             -----------------------cCCcEEEEcCCccccc
Q 024549           56 -----------------------YKENFFLLRGNHECAS   71 (266)
Q Consensus        56 -----------------------~p~~v~~lrGNHE~~~   71 (266)
                                             ..-.|+++.||||...
T Consensus       115 sd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~  153 (431)
T 3t1i_A          115 SDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT  153 (431)
T ss_dssp             SCC------------------CCBCSCEEECCCSSSCCB
T ss_pred             cchhhccccccccccccccccccCCCcEEEEccCCCCcc
Confidence                                   1356999999999864


No 36 
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=97.55  E-value=8.3e-05  Score=69.73  Aligned_cols=50  Identities=20%  Similarity=0.231  Sum_probs=38.3

Q ss_pred             CEEEEccCCC------------HHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHH
Q 024549            1 MIYDCDVHGQ------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLL   50 (266)
Q Consensus         1 ii~IgDiHG~------------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~   50 (266)
                      ++.++|+|-.            ...|.++++.+.-...+.+|+.||++|++..+.+++..++
T Consensus        79 ilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~  140 (472)
T 4fbk_A           79 ILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQAL  140 (472)
T ss_dssp             EEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHH
T ss_pred             EEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHH
Confidence            3567799974            3467777777655667889999999999999988766544


No 37 
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=97.54  E-value=8e-05  Score=68.97  Aligned_cols=50  Identities=20%  Similarity=0.231  Sum_probs=38.4

Q ss_pred             CEEEEccCCC------------HHHHHHHHHhcCCCCCceEEEeCCcccCCCCcHHHHHHHH
Q 024549            1 MIYDCDVHGQ------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLL   50 (266)
Q Consensus         1 ii~IgDiHG~------------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~   50 (266)
                      ++.++|+|-.            ...|.++++.+.-...+.+|+.||++|++..+.+++..++
T Consensus        16 ilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~   77 (417)
T 4fbw_A           16 ILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQAL   77 (417)
T ss_dssp             EEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHH
T ss_pred             EEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHH
Confidence            3567799975            3467777777655667889999999999999988766544


No 38 
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=96.50  E-value=0.0024  Score=58.74  Aligned_cols=67  Identities=15%  Similarity=0.056  Sum_probs=40.4

Q ss_pred             EEEEccCCCHHHHHHHHHhcCC--CCCceEEEeCCcccCCCC------cHH-HHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549            2 IYDCDVHGQFSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQ------SIE-TICLLLAYKVKYKENFFLLRGNHECAS   71 (266)
Q Consensus         2 i~IgDiHG~~~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~------s~e-vl~~l~~lk~~~p~~v~~lrGNHE~~~   71 (266)
                      ++|||+|....... .++.+..  ...+-+|++||+++.+..      ..+ ...++..+..  .-.++.++||||...
T Consensus       123 ~~igD~~~~~~~~~-~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~--~~P~~~v~GNHD~~~  198 (424)
T 2qfp_A          123 GLIGDLGQSFDSNT-TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVA--YQPWIWTAGNHEIEF  198 (424)
T ss_dssp             EEECSCTTBHHHHH-HHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHT--TSCEEECCCHHHHCC
T ss_pred             EEEEeCCCCCChHH-HHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHh--cCCeEeecCCccccc
Confidence            57789998876543 3333222  245778899999986421      111 2223333322  346899999999863


No 39 
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=96.19  E-value=0.0039  Score=57.38  Aligned_cols=67  Identities=13%  Similarity=0.031  Sum_probs=38.6

Q ss_pred             EEEEccCCCHHHHHHHHHhcC-C-CCCceEEEeCCcccCCCC-----c-HH-HHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549            2 IYDCDVHGQFSDLLRLFEYGG-Y-PPEANYLFLGDYVDRGKQ-----S-IE-TICLLLAYKVKYKENFFLLRGNHECAS   71 (266)
Q Consensus         2 i~IgDiHG~~~~l~~~l~~~~-~-~~~~~~vfLGD~vDrG~~-----s-~e-vl~~l~~lk~~~p~~v~~lrGNHE~~~   71 (266)
                      +++||+|...... +.++.+. . ...+-+|++||+++.+..     . .+ ....+..+..  .-.++.++||||...
T Consensus       130 ~~~gD~~~~~~~~-~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~--~~P~~~v~GNHD~~~  205 (426)
T 1xzw_A          130 GLIGDIGQTHDSN-TTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVA--YQPWIWTAGNHEIDY  205 (426)
T ss_dssp             EEECSCTTBHHHH-HHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHT--TSCEECCCCGGGCCC
T ss_pred             EEEEeCCCCCchH-HHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHh--cCCEEEecccccccc
Confidence            5678999875322 2222221 1 245778899999965321     1 11 2223333322  346899999999864


No 40 
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=95.64  E-value=0.0023  Score=57.60  Aligned_cols=70  Identities=10%  Similarity=-0.001  Sum_probs=40.8

Q ss_pred             EEEEccCCCHHHHH----HHHHhcCCCCCceEEEeCCcccCCCCcH------HHHHHHHHh-hhhcCCcEEEEcCCcccc
Q 024549            2 IYDCDVHGQFSDLL----RLFEYGGYPPEANYLFLGDYVDRGKQSI------ETICLLLAY-KVKYKENFFLLRGNHECA   70 (266)
Q Consensus         2 i~IgDiHG~~~~l~----~~l~~~~~~~~~~~vfLGD~vDrG~~s~------evl~~l~~l-k~~~p~~v~~lrGNHE~~   70 (266)
                      ++|||.|.....-.    .+.+.+...+.+-+|++||+++.|..+.      +.+..++.. +....-.++.++||||..
T Consensus         7 ~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlGNHD~~   86 (342)
T 3tgh_A            7 ASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWT   86 (342)
T ss_dssp             EECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCCHHHHT
T ss_pred             EEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCCCCccC
Confidence            67889997543222    1222222245678899999998887432      222222211 012334579999999986


Q ss_pred             c
Q 024549           71 S   71 (266)
Q Consensus        71 ~   71 (266)
                      .
T Consensus        87 ~   87 (342)
T 3tgh_A           87 G   87 (342)
T ss_dssp             S
T ss_pred             C
Confidence            3


No 41 
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=95.57  E-value=0.0042  Score=58.73  Aligned_cols=65  Identities=20%  Similarity=0.037  Sum_probs=40.0

Q ss_pred             CEEEEccCCCHH----------HHHHHHHhcCC-----CCCceEEEeCCcccCCCCc-----HHHHHHHHHhhhhcCCcE
Q 024549            1 MIYDCDVHGQFS----------DLLRLFEYGGY-----PPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENF   60 (266)
Q Consensus         1 ii~IgDiHG~~~----------~l~~~l~~~~~-----~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v   60 (266)
                      |+.++|+||.+.          .+..+++.+.-     .+.+-+|..||+++..+.+     ..++..|-.+.   +  .
T Consensus        11 Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg---~--d   85 (516)
T 1hp1_A           11 VLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---Y--D   85 (516)
T ss_dssp             EEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---C--C
T ss_pred             EEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC---C--C
Confidence            467779999743          45556654332     1335677899999765532     24445554442   2  2


Q ss_pred             EEEcCCcccc
Q 024549           61 FLLRGNHECA   70 (266)
Q Consensus        61 ~~lrGNHE~~   70 (266)
                      +...||||.-
T Consensus        86 ~~~~GNHEfd   95 (516)
T 1hp1_A           86 AMAIGNHEFD   95 (516)
T ss_dssp             EEECCGGGGS
T ss_pred             EEeecccccc
Confidence            5788999983


No 42 
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=95.51  E-value=0.0053  Score=58.29  Aligned_cols=64  Identities=19%  Similarity=0.130  Sum_probs=40.0

Q ss_pred             CEEEEccCCCH----------------HHHHHHHHhcCCCCCc-eEEEeCCcccCCCCc----------HHHHHHHHHhh
Q 024549            1 MIYDCDVHGQF----------------SDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQS----------IETICLLLAYK   53 (266)
Q Consensus         1 ii~IgDiHG~~----------------~~l~~~l~~~~~~~~~-~~vfLGD~vDrG~~s----------~evl~~l~~lk   53 (266)
                      |+.++|+||++                ..+..+++.+.-...+ -+|..||.+++++.+          ..++..|-.+ 
T Consensus        22 Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ln~l-  100 (527)
T 3qfk_A           22 FYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRM-  100 (527)
T ss_dssp             EEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHHHHT-
T ss_pred             EEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHHHhc-
Confidence            45677999986                2666677665443333 345689999987553          2444444443 


Q ss_pred             hhcCCcEEEEcCCccc
Q 024549           54 VKYKENFFLLRGNHEC   69 (266)
Q Consensus        54 ~~~p~~v~~lrGNHE~   69 (266)
                         +.. ++..||||.
T Consensus       101 ---g~D-~~t~GNHef  112 (527)
T 3qfk_A          101 ---AFD-FGTLGNHEF  112 (527)
T ss_dssp             ---CCC-EECCCGGGG
T ss_pred             ---CCc-EEecccccc
Confidence               223 456899995


No 43 
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=94.78  E-value=0.018  Score=54.93  Aligned_cols=65  Identities=17%  Similarity=0.208  Sum_probs=40.6

Q ss_pred             CEEEEccCCCH-----------------HHHHHHHHhcCCC-CCceEEEeCCcccCCCCc-----HHHHHHHHHhhhhcC
Q 024549            1 MIYDCDVHGQF-----------------SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYK   57 (266)
Q Consensus         1 ii~IgDiHG~~-----------------~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p   57 (266)
                      |+.++|+||.+                 ..+..+++.+.-. ++.-++..||++++.+.+     ..++..+-.+.   +
T Consensus        32 Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~lg---~  108 (552)
T 2z1a_A           32 LVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLR---Y  108 (552)
T ss_dssp             EEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTT---C
T ss_pred             EEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhcC---C
Confidence            35677999763                 4666666654332 333567799999987642     34444444442   2


Q ss_pred             CcEEEEcCCcccc
Q 024549           58 ENFFLLRGNHECA   70 (266)
Q Consensus        58 ~~v~~lrGNHE~~   70 (266)
                       . +...||||.-
T Consensus       109 -d-~~~lGNHEfd  119 (552)
T 2z1a_A          109 -R-AMALGNHEFD  119 (552)
T ss_dssp             -C-EEECCGGGGT
T ss_pred             -C-cccccccccc
Confidence             2 5778999974


No 44 
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=94.42  E-value=0.017  Score=55.08  Aligned_cols=64  Identities=22%  Similarity=0.233  Sum_probs=40.6

Q ss_pred             CEEEEccCCCH--------------------HHHHHHHHhcCCC-CCceEEEeCCcccCCCCc-----HHHHHHHHHhhh
Q 024549            1 MIYDCDVHGQF--------------------SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQS-----IETICLLLAYKV   54 (266)
Q Consensus         1 ii~IgDiHG~~--------------------~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~   54 (266)
                      |+.++|+||.+                    ..+..+++.+.-. +.+-+|..||.++..+.+     ..++..|-.+. 
T Consensus        28 Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln~lg-  106 (546)
T 4h2g_A           28 ILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNALR-  106 (546)
T ss_dssp             EEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHT-
T ss_pred             EEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHHHhcC-
Confidence            35677999863                    5566666654332 335667899999987643     33445554442 


Q ss_pred             hcCCcEEEEcCCccc
Q 024549           55 KYKENFFLLRGNHEC   69 (266)
Q Consensus        55 ~~p~~v~~lrGNHE~   69 (266)
                        . . +...||||.
T Consensus       107 --~-d-~~~~GNHEf  117 (546)
T 4h2g_A          107 --Y-D-AMALGNHEF  117 (546)
T ss_dssp             --C-S-EEECCGGGG
T ss_pred             --C-c-EEeccCccc
Confidence              2 2 467899997


No 45 
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=93.95  E-value=0.016  Score=54.68  Aligned_cols=64  Identities=25%  Similarity=0.405  Sum_probs=36.2

Q ss_pred             CEEEEccCCC------------------HHHHHHHHHhcCCCCCceEEE-eCCcccCCCCc-----HHHHHHHHHhhhhc
Q 024549            1 MIYDCDVHGQ------------------FSDLLRLFEYGGYPPEANYLF-LGDYVDRGKQS-----IETICLLLAYKVKY   56 (266)
Q Consensus         1 ii~IgDiHG~------------------~~~l~~~l~~~~~~~~~~~vf-LGD~vDrG~~s-----~evl~~l~~lk~~~   56 (266)
                      |+.+.|+||+                  +..+..+++.+.-...+.+++ .||.++..+.+     ..++..|-.+    
T Consensus         9 Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln~l----   84 (509)
T 3ive_A            9 IIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNTM----   84 (509)
T ss_dssp             EEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHTTS----
T ss_pred             EEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHHhc----
Confidence            3566799987                  445566666544333344555 99999843221     2334443322    


Q ss_pred             CCcEEEEcCCccc
Q 024549           57 KENFFLLRGNHEC   69 (266)
Q Consensus        57 p~~v~~lrGNHE~   69 (266)
                      +.. ++..||||.
T Consensus        85 g~D-~~tlGNHEf   96 (509)
T 3ive_A           85 PFD-AVTIGNHEF   96 (509)
T ss_dssp             CCS-EECCCGGGG
T ss_pred             CCc-EEeeccccc
Confidence            223 456799995


No 46 
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=93.66  E-value=0.042  Score=52.73  Aligned_cols=64  Identities=17%  Similarity=0.121  Sum_probs=38.6

Q ss_pred             CEEEEccCCCH---------------------HHHHHHHHhcCCC-CCceEEEeCCcccCCCC-----cHHHHHHHHHhh
Q 024549            1 MIYDCDVHGQF---------------------SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQ-----SIETICLLLAYK   53 (266)
Q Consensus         1 ii~IgDiHG~~---------------------~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk   53 (266)
                      |+.+.|+||++                     ..+..+++.+.-. +..-+|..||.++..+.     ...++..|-.+.
T Consensus        15 Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~lg   94 (579)
T 3ztv_A           15 ILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVMNAGN   94 (579)
T ss_dssp             EEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHHHHHT
T ss_pred             EEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHHHhcC
Confidence            35677999984                     3455555554322 33456679999987642     234445554442


Q ss_pred             hhcCCcEEEEcCCccc
Q 024549           54 VKYKENFFLLRGNHEC   69 (266)
Q Consensus        54 ~~~p~~v~~lrGNHE~   69 (266)
                         . . +...||||.
T Consensus        95 ---~-D-~~tlGNHEf  105 (579)
T 3ztv_A           95 ---F-H-YFTLGNHEF  105 (579)
T ss_dssp             ---C-S-EEECCSGGG
T ss_pred             ---c-C-eeecccccc
Confidence               2 3 366899996


No 47 
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=92.73  E-value=0.055  Score=48.49  Aligned_cols=64  Identities=16%  Similarity=0.096  Sum_probs=36.1

Q ss_pred             EEEEccCCCH----------------HHHHHHHHhcCCC-CCceEEEeCCcccCCCCcH-------------HHHHHHHH
Q 024549            2 IYDCDVHGQF----------------SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSI-------------ETICLLLA   51 (266)
Q Consensus         2 i~IgDiHG~~----------------~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~-------------evl~~l~~   51 (266)
                      +.+.|+||++                ..+..+++.+.-. ++..+|..||.+...+.+.             .++..+-.
T Consensus        12 l~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~~~~~~~~~~~~g~~~p~~~~mn~   91 (339)
T 3jyf_A           12 METTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVYKAMNT   91 (339)
T ss_dssp             EEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHHHHHHHHHCCCTTCCCHHHHHHTT
T ss_pred             EEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchhHHhhhhcccccccchHHHHHHHh
Confidence            4566999986                3455555544322 3345567999997544321             23333333


Q ss_pred             hhhhcCCcEEEEcCCcccc
Q 024549           52 YKVKYKENFFLLRGNHECA   70 (266)
Q Consensus        52 lk~~~p~~v~~lrGNHE~~   70 (266)
                      +    +..+ +..||||.-
T Consensus        92 l----g~D~-~t~GNHEfd  105 (339)
T 3jyf_A           92 L----NYAV-GNLGNHEFN  105 (339)
T ss_dssp             S----CCSE-EECCGGGGT
T ss_pred             c----CCCE-Eecchhhhh
Confidence            3    2244 457999963


No 48 
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=92.32  E-value=0.057  Score=48.40  Aligned_cols=40  Identities=15%  Similarity=0.241  Sum_probs=24.7

Q ss_pred             EEEEccCCCH----------------HHHHHHHHhcCCC-CCceEEEeCCcccCCCC
Q 024549            2 IYDCDVHGQF----------------SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQ   41 (266)
Q Consensus         2 i~IgDiHG~~----------------~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~   41 (266)
                      +.+.|+||++                ..+..+++.+.-. +...+|..||.+...|.
T Consensus        15 l~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~~   71 (341)
T 3gve_A           15 LATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPL   71 (341)
T ss_dssp             EEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH
T ss_pred             EEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcHH
Confidence            5566999986                3455555544322 23445569999976543


No 49 
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=91.83  E-value=0.051  Score=52.00  Aligned_cols=66  Identities=18%  Similarity=0.213  Sum_probs=36.4

Q ss_pred             CEEEEccCCCH----------------HHHHHHHHhcC--CCCCceEEEeCCcccCCCCc-------HHHHHHHHHhhhh
Q 024549            1 MIYDCDVHGQF----------------SDLLRLFEYGG--YPPEANYLFLGDYVDRGKQS-------IETICLLLAYKVK   55 (266)
Q Consensus         1 ii~IgDiHG~~----------------~~l~~~l~~~~--~~~~~~~vfLGD~vDrG~~s-------~evl~~l~~lk~~   55 (266)
                      |+.++|+||.+                ..+...++...  ..++..+|..||.++..+.+       ..++..|-.+.  
T Consensus        18 ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~lg--   95 (557)
T 3c9f_A           18 FVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQD--   95 (557)
T ss_dssp             EEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTSC--
T ss_pred             EEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHhcC--
Confidence            35677999974                23334444321  22233456799999765422       23344443332  


Q ss_pred             cCCcEEEEcCCccccc
Q 024549           56 YKENFFLLRGNHECAS   71 (266)
Q Consensus        56 ~p~~v~~lrGNHE~~~   71 (266)
                        .. ++..||||.-.
T Consensus        96 --~D-a~tlGNHEfD~  108 (557)
T 3c9f_A           96 --YD-LLTIGNHELYL  108 (557)
T ss_dssp             --CS-EECCCGGGSSS
T ss_pred             --CC-EEeecchhccc
Confidence              23 45679999853


No 50 
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=91.82  E-value=0.085  Score=46.04  Aligned_cols=65  Identities=17%  Similarity=0.134  Sum_probs=37.9

Q ss_pred             CEEEEccCCCHH--HHHHHHHhcCCC-CCceEEEeCCcccCC-CCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549            1 MIYDCDVHGQFS--DLLRLFEYGGYP-PEANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECA   70 (266)
Q Consensus         1 ii~IgDiHG~~~--~l~~~l~~~~~~-~~~~~vfLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~   70 (266)
                      |+++|||||...  .+...+..+.-. ..+.++.-||-.--| +.+..+...|..+.    -.+. -.||||.-
T Consensus         7 ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G----~Da~-TlGNHefD   75 (281)
T 1t71_A            7 FIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAG----VNYI-TMGNHTWF   75 (281)
T ss_dssp             EEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHT----CCEE-ECCTTTTC
T ss_pred             EEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcC----CCEE-EEccCccc
Confidence            468899999753  334444443221 234566656655433 45667777776663    3444 45999974


No 51 
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=87.98  E-value=0.35  Score=45.61  Aligned_cols=63  Identities=22%  Similarity=0.188  Sum_probs=37.7

Q ss_pred             EEEEccCCCH--------------------HHHHHHHHhcCC-CCCceEEEeCCcccCCCCc-----HHHHHHHHHhhhh
Q 024549            2 IYDCDVHGQF--------------------SDLLRLFEYGGY-PPEANYLFLGDYVDRGKQS-----IETICLLLAYKVK   55 (266)
Q Consensus         2 i~IgDiHG~~--------------------~~l~~~l~~~~~-~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~   55 (266)
                      +.+.|+||++                    ..+..+++.+.- .++..+|..||.+...+.+     ..++.++-+|.  
T Consensus         7 LhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~lg--   84 (530)
T 4h1s_A            7 LHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNALR--   84 (530)
T ss_dssp             EEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHHTT--
T ss_pred             EEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhccC--
Confidence            4556999875                    345555554332 2344556699999876532     33445554442  


Q ss_pred             cCCcEEEEcCCccc
Q 024549           56 YKENFFLLRGNHEC   69 (266)
Q Consensus        56 ~p~~v~~lrGNHE~   69 (266)
                         -=....||||.
T Consensus        85 ---yDa~~lGNHEF   95 (530)
T 4h1s_A           85 ---YDAMALGNHEF   95 (530)
T ss_dssp             ---CCEEECCGGGG
T ss_pred             ---CCEEEEchhhh
Confidence               22478899997


No 52 
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=87.86  E-value=0.47  Score=40.66  Aligned_cols=65  Identities=11%  Similarity=-0.036  Sum_probs=42.8

Q ss_pred             CEEEEccCCC--HHHHHHHHHhcCCCCCceEEE-eCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccccc
Q 024549            1 MIYDCDVHGQ--FSDLLRLFEYGGYPPEANYLF-LGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECAS   71 (266)
Q Consensus         1 ii~IgDiHG~--~~~l~~~l~~~~~~~~~~~vf-LGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~   71 (266)
                      |++||||=|.  ...+...|..+.... +.+++ -||....-..+.+....|..+    +-.+. -.||||.-.
T Consensus         3 ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~~~~~~~l~~~----G~D~~-T~GNHefD~   70 (252)
T 2z06_A            3 VLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLDRRSYRLLREA----GVDLV-SLGNHAWDH   70 (252)
T ss_dssp             EEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCCHHHHHHHHHH----TCCEE-ECCTTTTSC
T ss_pred             EEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcCHHHHHHHHhC----CCCEE-EeccEeeEC
Confidence            4688999665  456677777665444 44444 677776555677777777666    33554 559999853


No 53 
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=84.38  E-value=1  Score=38.53  Aligned_cols=64  Identities=16%  Similarity=0.035  Sum_probs=40.0

Q ss_pred             CEEEEccCCCH--HHHHHHHHhcCCCCCceEEE-eCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 024549            1 MIYDCDVHGQF--SDLLRLFEYGGYPPEANYLF-LGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA   70 (266)
Q Consensus         1 ii~IgDiHG~~--~~l~~~l~~~~~~~~~~~vf-LGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~   70 (266)
                      |++||||=|..  ..+...+..+.... +.++. .||....-+.+......|..+    +-.+..+ ||||.-
T Consensus         3 ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~~~~~~l~~~----G~Da~Tl-GNHefD   69 (255)
T 1t70_A            3 VLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHRDAARGALEA----GAGCLTL-GNHAWH   69 (255)
T ss_dssp             EEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCHHHHHHHHHH----TCSEEEC-CTTTTS
T ss_pred             EEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCHHHHHHHHhC----CCCEEEe-cccccc
Confidence            46889997765  45667777654333 55555 455544325566676777655    3355444 999985


No 54 
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=75.71  E-value=1.4  Score=41.87  Aligned_cols=55  Identities=16%  Similarity=0.030  Sum_probs=32.6

Q ss_pred             CCHHHHHHHHHhcCCC-----CCceEEEeCCcccCCCCc-----HHHHHHHHHhhhhcCCcEEEEcCCccc
Q 024549            9 GQFSDLLRLFEYGGYP-----PEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENFFLLRGNHEC   69 (266)
Q Consensus         9 G~~~~l~~~l~~~~~~-----~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~   69 (266)
                      |.+..+..+++.+.-.     ++.-+|..||++++.+.+     ..++.++-.|.    ..+ +. ||||.
T Consensus       102 GG~arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg----~d~-~~-GNHEf  166 (562)
T 2wdc_A          102 GGMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG----VDH-MV-SHWEW  166 (562)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHT----CCE-EC-CSGGG
T ss_pred             CCHHHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhC----CcE-Ee-cchhc
Confidence            3345565666654322     344667899999987643     34455554443    234 46 99996


No 55 
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=70.21  E-value=5.1  Score=37.74  Aligned_cols=24  Identities=13%  Similarity=0.466  Sum_probs=18.4

Q ss_pred             hhHHHHHHHHCCCc--eEEeeeeeec
Q 024549          171 ADKVVEFLQKHDLD--LICRAHQVVE  194 (266)
Q Consensus       171 ~~~~~~fl~~~~~~--~iIrgH~~~~  194 (266)
                      .+.+..++++++++  +++-||...-
T Consensus       359 R~~Ll~~l~~~~v~n~vvLsGDvH~~  384 (527)
T 2yeq_A          359 RERVINFIKSKNLNNVVVLTGDVHAS  384 (527)
T ss_dssp             HHHHHHHHHHTTCCCEEEEECSSSSE
T ss_pred             HHHHHHHHHHhCCCCEEEEEcchHHH
Confidence            44577788889885  9999998753


No 56 
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=50.06  E-value=31  Score=31.94  Aligned_cols=61  Identities=11%  Similarity=0.176  Sum_probs=40.1

Q ss_pred             CHHHHHHHHHhcCCC-CCceEEEeCCcccCCCC------------------cH-HHHHHHHH--hhhh-cCCcEEEEcCC
Q 024549           10 QFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQ------------------SI-ETICLLLA--YKVK-YKENFFLLRGN   66 (266)
Q Consensus        10 ~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~------------------s~-evl~~l~~--lk~~-~p~~v~~lrGN   66 (266)
                      +|+.|..+++.+.-. ..+-+|++|.+||.-..                  +. +++..+++  ++.. ..-+|++++|+
T Consensus       164 ~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~~il~~l~~~t~VVlVPS~  243 (460)
T 3flo_A          164 SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFTPILKTISPHIQTVLIPST  243 (460)
T ss_dssp             CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTHHHHTTSCTTSEEEEECCT
T ss_pred             ChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHHHHHHhccCCCEEEEeCCc
Confidence            377889999987664 56788999999997521                  11 23333321  1111 23569999999


Q ss_pred             cccc
Q 024549           67 HECA   70 (266)
Q Consensus        67 HE~~   70 (266)
                      ||..
T Consensus       244 rD~~  247 (460)
T 3flo_A          244 KDAI  247 (460)
T ss_dssp             TBTT
T ss_pred             cccc
Confidence            9985


No 57 
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=26.72  E-value=2.1e+02  Score=23.34  Aligned_cols=28  Identities=14%  Similarity=0.253  Sum_probs=22.5

Q ss_pred             ecChhHHHHHHHHC-CCceEEeeeeeecc
Q 024549          168 TFGADKVVEFLQKH-DLDLICRAHQVVED  195 (266)
Q Consensus       168 ~fG~~~~~~fl~~~-~~~~iIrgH~~~~~  195 (266)
                      ..+.+.+.+.+++. ++++++.||+....
T Consensus       242 ~~~~~~~~~ll~~~~~v~~~~~GH~H~~~  270 (322)
T 2nxf_A          242 AWNHEAVLSVLRSHQSVLCFIAGHDHDGG  270 (322)
T ss_dssp             CTTHHHHHHHHHTCTTEEEEEECSCTTCE
T ss_pred             ccCHHHHHHHHhcCCCeEEEEcCCcCCCC
Confidence            34677888889888 79999999998643


No 58 
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=26.46  E-value=78  Score=29.34  Aligned_cols=54  Identities=13%  Similarity=0.202  Sum_probs=34.2

Q ss_pred             CceEEeeeeeeccCeEEec--CCeEEEEecCCCCCCCCCCcEEEEEEc-CCCceEEEEEecc
Q 024549          183 LDLICRAHQVVEDGYEFFA--KRQLVTVFSAPNYCGEFDNAGAMMSVD-DTLTCSFQILKAS  241 (266)
Q Consensus       183 ~~~iIrgH~~~~~G~~~~~--~~~~itifSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~  241 (266)
                      -+..+.||++. -|.+...  +++-+.+.|=|.|+    ..|.++.+| ++++|....|...
T Consensus       406 PhVyf~Gnq~~-f~t~~~~~~~~~~vrLv~VP~Fs----~T~~~vLvdl~tLe~~~v~f~~~  462 (476)
T 3e0j_A          406 PHVYFCGNTPS-FGSKIIRGPEDQTVLLVTVPDFS----ATQTACLVNLRSLACQPISFSGF  462 (476)
T ss_dssp             CSEEEEEEESS-CEEEEEECSSCCEEEEEEEECHH----HHCEEEEEETTTTBCCEEEEEEC
T ss_pred             CcEEEeCCCCc-cceeEEecCCCCeEEEEEcCCcC----CCCeEEEEECccccEEEEEEecc
Confidence            35678999986 5565542  35556677778775    355555554 5577777766654


Done!