Your job contains 1 sequence.
>024550
MDFDMKKMIMDDLERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVY
DLELSNLLGNNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQK
QYHITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGF
KMLASNYLGIAEHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRA
NDGSEAKEAEERAVQAEKKVLEISEE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024550
(266 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 797 2.6e-79 1
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 764 8.1e-76 1
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 757 4.5e-75 1
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 751 1.9e-74 1
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 736 7.5e-73 1
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 723 1.8e-71 1
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 703 2.4e-69 1
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 660 8.5e-65 1
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 660 8.5e-65 1
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 659 1.1e-64 1
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 656 2.3e-64 1
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 639 1.4e-62 1
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 628 2.1e-61 1
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 624 5.5e-61 1
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 612 1.0e-59 1
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 610 1.7e-59 1
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 607 3.5e-59 1
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 596 5.1e-58 1
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 589 2.8e-57 1
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 578 4.2e-56 1
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 578 4.2e-56 1
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 270 6.5e-49 2
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 510 6.7e-49 1
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 231 2.1e-38 2
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 301 9.4e-27 1
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 300 1.2e-26 1
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 298 3.2e-26 1
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 297 3.4e-26 1
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 294 6.7e-26 1
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 289 1.8e-25 1
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 288 2.2e-25 1
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 287 2.9e-25 1
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 287 3.5e-25 1
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 284 6.0e-25 1
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 283 8.2e-25 1
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 283 8.2e-25 1
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 284 1.0e-24 1
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 281 1.4e-24 1
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 279 7.1e-24 1
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 172 9.1e-24 2
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 276 1.5e-23 1
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 273 2.2e-23 1
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 266 8.6e-23 1
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 264 2.6e-22 1
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 264 2.6e-22 1
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 240 2.7e-20 1
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 248 3.9e-20 1
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 223 1.1e-17 1
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 136 9.6e-16 2
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 197 9.8e-16 1
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 203 2.0e-15 1
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 187 1.1e-14 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 190 5.8e-14 1
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 190 5.9e-14 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 190 5.9e-14 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 189 1.1e-13 1
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 174 1.9e-12 2
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 181 4.7e-12 1
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 178 5.7e-12 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 178 1.3e-11 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 178 1.4e-11 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 178 1.9e-11 1
SGD|S000002165 - symbol:RPT2 "ATPase of the 19S regulator... 175 2.0e-11 1
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 174 2.3e-11 1
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 174 2.4e-11 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 176 3.0e-11 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 172 4.2e-11 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 172 4.2e-11 1
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 172 4.5e-11 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 172 4.5e-11 1
GENEDB_PFALCIPARUM|PFD0665c - symbol:PFD0665c "26s protea... 171 5.9e-11 1
UNIPROTKB|Q8I1V1 - symbol:PFD0665c "26S proteasome AAA-AT... 171 5.9e-11 1
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 169 1.1e-10 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 168 1.3e-10 1
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 172 1.3e-10 1
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 173 1.3e-10 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 172 1.3e-10 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 168 1.9e-10 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 168 1.9e-10 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 168 1.9e-10 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 168 1.9e-10 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 168 1.9e-10 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 168 1.9e-10 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 168 1.9e-10 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 168 1.9e-10 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 168 1.9e-10 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 168 1.9e-10 1
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 170 2.3e-10 1
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 169 2.7e-10 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 165 4.9e-10 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 165 4.9e-10 1
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 163 6.2e-10 1
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 163 6.5e-10 1
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 163 6.5e-10 1
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 163 6.5e-10 1
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 163 6.5e-10 1
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 163 6.5e-10 1
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 163 6.5e-10 1
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 163 6.5e-10 1
DICTYBASE|DDB_G0284517 - symbol:psmC6 "26S protease regul... 163 6.7e-10 1
WARNING: Descriptions of 338 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 158/250 (63%), Positives = 198/250 (79%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L++F++R++FY+RVGKAWKRGYLLYGPPGTGKSSLIAAMAN+L FD+YDLEL+ + N++
Sbjct: 281 LDKFVKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLNFDIYDLELTAVNNNSE 340
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
LR +LIAT N+SIL+VEDIDC +EL+DR S D + E + +TLSGLLNF
Sbjct: 341 LRRLLIATANRSILIVEDIDCSLELKDRTSDEPPRESDDI----EDPRYKKVTLSGLLNF 396
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
IDGLWSSCGDERIIIFTTN+KE+LD ALLRPGRMDMHI+MS+CTPS FK LA NYL I E
Sbjct: 397 IDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKALALNYLEIKE 456
Query: 193 HPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKEAEER 252
H LF +IE+ I +VTPA+VAEQLMRN++ + L GLIEFL+ KK N+ +AK E++
Sbjct: 457 HRLFSKIEEGIEATEVTPAEVAEQLMRNDSVDKVLEGLIEFLKVKKIENEQDKAK-TEKQ 515
Query: 253 AVQAEKKVLE 262
++ +KK E
Sbjct: 516 ELENKKKTKE 525
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 154/261 (59%), Positives = 198/261 (75%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L+RF++RKEFY+RVGKAWKRGYLLYGPPGTGKSSL+AAMANYLKFDVYDL+L++++ ++D
Sbjct: 235 LDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVYDLQLASVMRDSD 294
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQ-QKQYHITLSGLLN 131
LR +L+AT N+SILV+EDIDC ++L +R+ + P + G + + Q +TLSGLLN
Sbjct: 295 LRRLLLATRNRSILVIEDIDCAVDLPNRIEQ-----P---VEGKNRGESQGPLTLSGLLN 346
Query: 132 FIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIA 191
FIDGLWSSCGDERIIIFTTNHK+RLDPALLRPGRMDMHI M HC+ GFK LASNYLG++
Sbjct: 347 FIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLS 406
Query: 192 E----HPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLES---KKRANDGS 244
+ H LF EIE+LI +TPA VAE+LM++E + AL GL+ LE K + ++
Sbjct: 407 DAAMPHRLFPEIERLIDGEVMTPAQVAEELMKSEDADVALEGLVNVLEKMRLKSKESNPV 466
Query: 245 EAKEAEERAVQAEKKVLEISE 265
K+ E R E ++ +E
Sbjct: 467 MMKQKESRLEMEEMRLKSDTE 487
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 151/234 (64%), Positives = 191/234 (81%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L+RF+QRK FY RVGKAWKRGYLLYGPPGTGKSSLIAA+AN+L FD+YDL+L++L N +
Sbjct: 229 LDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIANHLNFDIYDLDLTSLNNNAE 288
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
LR +L++T N+SILVVEDIDC IEL+DR + N D L K +TLSGLLNF
Sbjct: 289 LRRLLMSTANRSILVVEDIDCSIELKDRSTDQE--NNDPL------HKT--VTLSGLLNF 338
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DGLWSSCG+ERII+FTTN++E+LDPALLRPGRMDMHI+MS+CTP+ FK+LASNYL I +
Sbjct: 339 VDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHIHMSYCTPAAFKVLASNYLEIQD 398
Query: 193 HPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEA 246
H LF +IE+ I +VTPA+VAEQLMR+++ + L GL+EFL++KK+ D S+A
Sbjct: 399 HILFEQIEEFIREIEVTPAEVAEQLMRSDSVDKVLQGLVEFLKAKKQI-DNSKA 451
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 146/228 (64%), Positives = 184/228 (80%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
LERFL+RKEFY+RVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDV+DLELS++ N +
Sbjct: 225 LERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYDNGE 284
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
L+ +L++T N+SILV+EDIDC E++DR A N + ++Q + +TLSG+LNF
Sbjct: 285 LKRVLLSTTNRSILVIEDIDCNAEVRDR----EAENQE------DEQIKGKVTLSGILNF 334
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGI-- 190
IDGLWSS GDERII+FTTNHKERLDPALLRPGRMD+HINMS+CT GF+ L SNYLG+
Sbjct: 335 IDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSYCTGLGFRTLVSNYLGLDG 394
Query: 191 AEHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKK 238
HPL EIE L+ + +VTPA++AE+LM+++ + L G+I F+E +K
Sbjct: 395 LNHPLCEEIEALVDSTEVTPAELAEELMQDDDTDVVLRGVISFVEKRK 442
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 149/241 (61%), Positives = 187/241 (77%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+ERFL+R+EFY+RVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDV+DLELS++ N
Sbjct: 226 MERFLKRREFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYENAQ 285
Query: 73 LRHILIATENKSILVVEDIDCC-IELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLN 131
L+ IL++T N+SILV+EDIDC E+ DR + ++ YE+ +TLSGLLN
Sbjct: 286 LKSILLSTTNRSILVIEDIDCSSAEVVDREA------DEY--QEYEEGYYGRVTLSGLLN 337
Query: 132 FIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIA 191
F+DGLWSS GDERII+FTTNHKERLDPALLRPGRMDMHINMS+CT GF+ L SNYLG+
Sbjct: 338 FVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSYCTGLGFRTLVSNYLGLG 397
Query: 192 --EHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKEA 249
HPL EIE LI + +VTPA++AE+LM+ + + L G++ F+E++K + S+ KE
Sbjct: 398 GLNHPLCEEIEALIDSTEVTPAELAEELMQEDDTDVVLRGVVSFVENRKV--EISKTKEL 455
Query: 250 E 250
E
Sbjct: 456 E 456
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 151/262 (57%), Positives = 192/262 (73%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L+RF+ RK+FY+RVGKAWKRGYLLYGPPGTGKSSL+AAMANYLKFD+YDL+L+++ G+
Sbjct: 227 LDRFVGRKDFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDIYDLQLASVQGDAH 286
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSR-ARAANPDFLIAGYEQQKQYHITLSGLLN 131
LR +L+AT N SIL++EDIDC ++L RL + P + + K +TLSGLLN
Sbjct: 287 LRSLLLATNNSSILLIEDIDCSVDLPTRLQPPTETSQP---LGAVQVSKP--LTLSGLLN 341
Query: 132 FIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIA 191
IDGLWSSCG+ERIIIFTTN+KE+LDPALLRPGRMDMHI M HC+ GFK LASNYLG++
Sbjct: 342 CIDGLWSSCGNERIIIFTTNNKEKLDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLS 401
Query: 192 E-----HPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESK----KRAND 242
+ HPL +I+ LI +TPA VAE+LM++E + AL GL++ L+ K K+ +D
Sbjct: 402 DENDDTHPLCPDIKHLIDGHVLTPAQVAEELMKDEDADAALEGLVKVLKRKRLEPKKCDD 461
Query: 243 GSEAK---EAEERAVQAEKKVL 261
S+ K E EE AE VL
Sbjct: 462 ESKMKKLKEGEEAIADAELAVL 483
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 138/229 (60%), Positives = 175/229 (76%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L+RF++RK+FY+RVGK WKRGYLLYGPPGTGK+SL+AA+ANYLKFD+YDL+L+++ + D
Sbjct: 227 LDRFIRRKDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDAD 286
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
LR +L+ T N SIL+VEDIDC ++L RL + D + + +TLSGLL
Sbjct: 287 LRRLLLGTTNSSILLVEDIDCAVDLHTRL---QPKTQD------DTKGSSMLTLSGLLTC 337
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
IDGLWSSCGDERI+IFTT HKERLDPALLRPGRMDMHI+M HC FK LASNYLG++
Sbjct: 338 IDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHMGHCCFDVFKTLASNYLGLSH 397
Query: 193 ---HPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKK 238
H L+ EIE+LI +TPA VAE+LM+NE P+ AL GL++ L+ K+
Sbjct: 398 DDPHHLYPEIERLIKGEVLTPAQVAEELMKNEDPDVALEGLVKVLKRKR 446
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 127/245 (51%), Positives = 178/245 (72%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L F KE+Y+++GKAWKRGYLL+GPPGTGKS++IAAMAN+L + +YDLEL+ + N++
Sbjct: 220 LAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYDLELTAIRNNSE 279
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRAR--AANPDFLIAGYEQQKQYHITLSGLL 130
LR +L AT +KSI+V+EDIDC ++L + + + + + G E+ K + +TLSGLL
Sbjct: 280 LRKLLTATSSKSIIVIEDIDCSLDLTGKRKKEKNLMTSREDGEQGTEEDKSF-VTLSGLL 338
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGI 190
NFIDG+WS+CG ERIIIFTTNH E+LDPAL+R GRMDMHI +S+C+ FK+LA NYL +
Sbjct: 339 NFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHIELSYCSFEAFKILAKNYLDL 398
Query: 191 AEHPLFVEIEKLIATAKVTPADVAEQLMRNEAP---EFALSGLIEFLESKKRANDGSEAK 247
HPLF +IE L+ K+ PADVAE LM+ + +L LI+ LE KK+ + G++
Sbjct: 399 DTHPLFKKIESLLKETKIAPADVAENLMKKNTEIDADGSLKDLIQALEGKKKIH-GAQVD 457
Query: 248 EAEER 252
E +++
Sbjct: 458 EPKDK 462
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 130/239 (54%), Positives = 172/239 (71%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L+ F K+F++ VG+AWKRGYLLYGPPGTGKSSL+AA+AN++ + +YDL++ ++ +
Sbjct: 13 LDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIYDLQIQSVKDDAM 72
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYH----ITLSG 128
LR IL +TEN+SIL++ED+DC D + R N D G Q K+ +TLSG
Sbjct: 73 LRQILTSTENRSILLIEDLDC--SGAD--TTCRKENKDETEYGENQNKKKKKDPKVTLSG 128
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
LLNF+DGLWSSC +ERIIIFTTNHKE+LDPALLRPGRMD+HI M +CTP FK LA+ YL
Sbjct: 129 LLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTPIVFKKLAALYL 188
Query: 189 GIAEHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAK 247
I EH LF IEK+ K TPA++ E+LM ++ P+ L GL+EFLESKK + +++
Sbjct: 189 EIEEHELFDPIEKMFLEVKATPAEITEKLMVSKDPDVTLKGLVEFLESKKMTKESVDSE 247
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 133/255 (52%), Positives = 180/255 (70%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L+ F + K+F++ VG+AWKRGYLLYGPPGTGKSS++AA+AN++K+ +YDL++ ++ + +
Sbjct: 221 LDAFSKGKDFFKSVGRAWKRGYLLYGPPGTGKSSMVAAIANHMKYHIYDLQIQSVRDDGE 280
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQ--KQYH--ITLSG 128
LR IL +T+N+SIL++EDIDC + R + G Q+ K++ I+LSG
Sbjct: 281 LREILTSTKNRSILLIEDIDCGADASRRRQSKKKEEDGGEDDGEPQKRKKKFEVGISLSG 340
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
LLNF+DGLWSSCG+E+IIIFTTNHKE+LDPALLRPGRMD+HI M +CTP FK L + YL
Sbjct: 341 LLNFVDGLWSSCGEEKIIIFTTNHKEKLDPALLRPGRMDVHILMDNCTPFVFKKLVALYL 400
Query: 189 GIAEHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKE 248
EH LF IEKLI TPA+V +QLM ++ + AL GL EFLE+KK G ++
Sbjct: 401 KTDEHVLFDPIEKLILEVSSTPAEVTQQLMASKNADIALKGLAEFLENKK-LKKGEDSSV 459
Query: 249 AEERAVQ-AEKKVLE 262
EE ++ AE K E
Sbjct: 460 EEEGEIEDAETKEAE 474
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 133/256 (51%), Positives = 176/256 (68%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L F K++Y+++GKAWKRGYLLYGPPGTGKS++IAAMAN L + +YDLEL+ + N++
Sbjct: 219 LAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSIYDLELTAIQNNSE 278
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAG---YEQQKQYHITLSGL 129
LR IL AT NKSI+V+EDIDC ++L + + + + G E+ K + +TLSGL
Sbjct: 279 LRKILTATSNKSIIVIEDIDCSLDLTGKRKKKESNLMIWRKDGDQDNEENKSF-VTLSGL 337
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
LNFIDG+WS+CG ERII+FTTNH +LDPAL+R GRMDMHI +S+CT FK LA NYL
Sbjct: 338 LNFIDGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEAFKTLAKNYLD 397
Query: 190 IAEHPLFVEIEKLIATAKVTPADVAEQLM---RNEAPEFALSGLIEFLESKKRANDGS-- 244
+ HPLF +IE L+ + PADVAE LM R + +L+ LIE LE KK+
Sbjct: 398 LDSHPLFSKIESLMKETNIAPADVAENLMKKNRETDADGSLNDLIESLERKKKVQIAQVD 457
Query: 245 EAKEAEERAVQAEKKV 260
E KE + V+A +K+
Sbjct: 458 EHKEYSNKIVEAFRKL 473
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 134/246 (54%), Positives = 172/246 (69%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNN- 71
L F KE+Y R+GKAWKRGYLLYGPPGTGKS++IAAMAN +K+++YDLEL+++ GNN
Sbjct: 218 LVAFRDGKEYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYDLELTSI-GNNW 276
Query: 72 DLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLN 131
+L+ +LIAT NKSI+V+EDIDC ++L R L E +K +TLSGLLN
Sbjct: 277 ELKKLLIATTNKSIIVIEDIDCSLDLTGE----REVKD--LKGDKEGKKSNAVTLSGLLN 330
Query: 132 FIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIA 191
FIDG+WS+CG ERI++FTTNH +LD AL+R GRMDMHI +S+CT FK+LA NYL I
Sbjct: 331 FIDGIWSACGQERILVFTTNHVGKLDQALIRRGRMDMHIELSYCTFGAFKILAKNYLNID 390
Query: 192 EHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKEAEE 251
H LF EIE L+ K+TPADVAE +M E + +L GLI LE K S+ + EE
Sbjct: 391 SHHLFGEIESLLKETKITPADVAEHMMAKEV-DGSLKGLIRALERIK----WSQNVKVEE 445
Query: 252 RAVQAE 257
+ Q +
Sbjct: 446 QLQQGD 451
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 123/240 (51%), Positives = 172/240 (71%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNNDLRH 75
F KE+Y+++GKAWKRGYLLYGPPGTGKS++I+AMAN L +++YDLEL+ + N++L+
Sbjct: 226 FSNGKEYYKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTAVKNNSELKK 285
Query: 76 ILIATENKSILVVEDIDCCIEL-QDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFID 134
+L AT +KSI+V+EDIDC + +R+ + + + G E + + +TLSGLLNFID
Sbjct: 286 LLTATSSKSIIVIEDIDCSADFTSNRIKKESNSRERY---GKEDKDENSVTLSGLLNFID 342
Query: 135 GLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL---GIA 191
G+WS+CG ERI++FTTNH E+LDPAL+R GRMDMHI +S+CT FK+LA NYL G
Sbjct: 343 GIWSACGQERIVVFTTNHLEKLDPALIRRGRMDMHIELSYCTYEAFKILAKNYLDLDGDD 402
Query: 192 EHPLFVEIEKLIATAKVTPADVAEQLM-RNEAPEF--ALSGLIEFLESKKRANDGSEAKE 248
HPLF EI+ L+ K++PADVAE LM RN+ + +L+ LI LE + + + K+
Sbjct: 403 AHPLFSEIKALLEETKISPADVAENLMARNQQIDVDKSLNLLISALEEENQYQRSQQEKK 462
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 131/270 (48%), Positives = 177/270 (65%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L +F + K++Y+++GKAWKRGYLL+GPPGTGKS++IAAMAN+L++DVYDLEL+ + N
Sbjct: 222 LIKFSKSKDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANFLEYDVYDLELTTVKDNTH 281
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPD----------FLIAGYEQQKQY 122
LR +LI T KSI+V+EDIDC + L + + D ++ + K+
Sbjct: 282 LRRLLIETSAKSIIVIEDIDCSLNLTGQRKKKEEEEEDGDDKNTIEKKMMMKNEGENKES 341
Query: 123 HITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKM 182
+TLSGLLNFIDGLWS+CG ERII+FTTN ++LDPAL+R GRMD HI MS+C FK+
Sbjct: 342 KVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIEMSYCCFEAFKV 401
Query: 183 LASNYLGIAEHPLFVEIEKLIATA--KVTPADVAEQLM---RNEAPEFALSGLIEFL-ES 236
LA NYL + E +F EI++L+ K+TPADV E L+ E E L LIE L E
Sbjct: 402 LAKNYLDVEESEMFEEIKRLLEVEEIKMTPADVGENLLPKSEKEGGETCLKRLIEALKEE 461
Query: 237 KKRANDGSEAKEAEERAVQAEKKVLEISEE 266
K+ A + +E EE + ++KV EI E
Sbjct: 462 KEEAK--KKVEEEEEEKQRKKEKVKEIEAE 489
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 126/257 (49%), Positives = 173/257 (67%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L+ F + + FY R G+AWKRGYLLYGPPGTGKSS+IAAMANYL++D+YDLEL+ + N++
Sbjct: 219 LKDFAECQSFYERTGRAWKRGYLLYGPPGTGKSSMIAAMANYLRYDIYDLELTEVKSNSE 278
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAAN---PDFLIA---GYEQQKQYHITL 126
LR +L+ T +KSI+V+EDIDC I L +R + + P+ L G + ITL
Sbjct: 279 LRKLLMKTSSKSIIVIEDIDCSINLTNRNKKQSTGSYNEPEMLTGSGLGDDLGDGNTITL 338
Query: 127 SGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASN 186
SGLLNF DGLWS CG ERI +FTTNH E+LDPALLR GRMDMHI+MS+CT S K+L N
Sbjct: 339 SGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRN 398
Query: 187 YLGIAEHPL----FVEIEKLIATAKVTPADVAEQLMRNEAP-EFALSGLIEFLESKKRAN 241
YLG E L E+ +++ A++TPADV+E L++N E A+ L+ L S+ N
Sbjct: 399 YLGFEEGDLNDVVLKELAEVVDRAEITPADVSEALIKNRRDKERAVRELLVDLRSRVERN 458
Query: 242 DGSEAKEAEERAVQAEK 258
+ + + +++ ++
Sbjct: 459 EKNGKSRVQNVSLEEQE 475
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 121/196 (61%), Positives = 150/196 (76%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L+RF++RK++Y+RVGKAWKR Y LYGPPGTGKSSL+AAMANYLKFD+YDL+L+N+ G+
Sbjct: 202 LDRFIKRKDYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMANYLKFDIYDLQLANVQGDAQ 261
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
LR +L+AT N SIL+VEDIDC ++L RL A G + +TLSGLLN
Sbjct: 262 LRSLLLATNNSSILLVEDIDCSVDLPTRLQPATTT------LGAPKGST-PLTLSGLLNC 314
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
IDGLWSSCGDERI+IFTTN+KE LDPALLRPG MDMHI + HC+ GFK+LASNYLG+
Sbjct: 315 IDGLWSSCGDERIVIFTTNNKEVLDPALLRPGCMDMHIYLGHCSFEGFKILASNYLGMPH 374
Query: 193 -----HPLFVEIEKLI 203
H L+ +I++LI
Sbjct: 375 DSDDPHRLYPDIKRLI 390
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 135/279 (48%), Positives = 183/279 (65%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L +F K++Y+++GKAWKRGYLL+GPPGTGKS++IAAMAN L++DVYDLEL+ + N +
Sbjct: 225 LIKFSNSKDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANLLEYDVYDLELTTVKDNTE 284
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDF-LIAGYEQQ--------KQYH 123
LR +LI T KSI+V+EDIDC ++L + + + D + E+Q K
Sbjct: 285 LRRLLIETSGKSIIVIEDIDCSLDLTGQRKQKKDEEEDEDETSPIEKQMKKDQGENKGSK 344
Query: 124 ITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKML 183
+TLSGLLNFIDGLWS+CG ERII+FTTN ++LDPAL+R GRMD HI MS+C FK+L
Sbjct: 345 VTLSGLLNFIDGLWSACGGERIIVFTTNFIDKLDPALIRKGRMDKHIEMSYCGFEAFKVL 404
Query: 184 ASNYLGIAE---HPLFVEIEKLIATA--KVTPADVAEQLMRN---EAPEFALSGLIEFL- 234
A+NYL E + LF EI++L+ K+TPADV E L++ E E L LIE L
Sbjct: 405 ANNYLDAKEEDDNELFDEIKRLLEVEEIKMTPADVGENLLKKSEVETKEICLKRLIEALK 464
Query: 235 ----ESKKRANDGSEAKEAEE---RAVQAEKKVLEISEE 266
E+K+R D + K+ EE R + EKK+ + +E
Sbjct: 465 EEKEEAKRRIEDEEKKKKEEEEIKRKKREEKKIKKEEKE 503
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 118/268 (44%), Positives = 180/268 (67%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L +F + K++YR+VGK WKRGYLL+GPPGTGKS++I+AMAN+L++DVYDLEL+ + N++
Sbjct: 221 LIKFTKGKDYYRKVGKPWKRGYLLFGPPGTGKSTMISAMANFLEYDVYDLELTTVKDNSE 280
Query: 73 LRHILIATENKSILVVEDIDCCIEL-----------QDRLSRARAANPDFLIAGYEQQKQ 121
L+ +++ T+ KSI+V+EDIDC ++L +D + + L+ +++
Sbjct: 281 LKKLMLDTKGKSIVVIEDIDCSLDLTGQRKKKKEEDEDEEEEEKKKEAEKLLKRERGERE 340
Query: 122 YHITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFK 181
+TLSGLLN IDGLWS+C E+II+FTTN+ ++LDPAL+R GRMD HI MS+C FK
Sbjct: 341 SKVTLSGLLNAIDGLWSACSGEKIIVFTTNYLDKLDPALIRRGRMDNHIEMSYCRFEAFK 400
Query: 182 MLASNYLGIAEHPLFVEIEKLIATAKVTPADVAEQLMRN---EAPEFALSGLIEFLESKK 238
+LA NYL I H LF EI++L+ ++PADVAE LM + + L+ L++ LE +K
Sbjct: 401 VLAKNYLEIESHDLFGEIKRLVEETDMSPADVAENLMPKSDEDDADICLTRLVKSLEEEK 460
Query: 239 RANDGSEAKEAEERAVQAEKKVLEISEE 266
+E ++A + +++ + +EE
Sbjct: 461 EKAKKLAEEEKMKKAARDARRIKKKAEE 488
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 124/267 (46%), Positives = 178/267 (66%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L +F + K++Y++VGK WKRGYLL+GPPGTGKS++IAA+AN+L +DVYDLEL+ + N++
Sbjct: 225 LIKFSKGKDYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIANFLDYDVYDLELTTVKDNSE 284
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQ----------KQY 122
L+ +L+ T +KSI+V+EDIDC ++L + R + D G E++ KQ
Sbjct: 285 LKKLLLDTTSKSIIVIEDIDCSLDLTGQ--RKKKKEEDEEEDGEEKKEGEKKPKVDDKQS 342
Query: 123 HITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKM 182
+TLSGLLN IDGLWS+C E+II+FTTN ++LDPAL+R GRMD HI MS+C FK+
Sbjct: 343 KVTLSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPALIRRGRMDNHIEMSYCKFEAFKV 402
Query: 183 LASNYLGIAEHPLFVEIEKLIATAKVTPADVAEQLMRN---EAPEFALSGLIEFLESKKR 239
LA NYL I H L+ EIE+ + ++PADVAE LM E + + L++ LE +K
Sbjct: 403 LAKNYLEIETHDLYGEIERKLEETDMSPADVAETLMPKSDEEDADICIKRLVKTLEEEKE 462
Query: 240 ANDGSEAKEAEERAVQAEKKVLEISEE 266
A+E E++ + E K ++ +EE
Sbjct: 463 -KARKLAEEEEKKKAEKEAKKMKKAEE 488
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 118/260 (45%), Positives = 173/260 (66%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L +F + K++YR+V K WKRGYLL+GPPGTGKS++I+A+AN+L++DVYDLEL+ + N +
Sbjct: 210 LIKFTKGKDYYRKVAKPWKRGYLLFGPPGTGKSTMISAIANFLEYDVYDLELTTVKDNAE 269
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFL-------IAGYEQQKQYHIT 125
L+ +++ T+ KSI+V+EDIDC +EL + + + + D + + ++T
Sbjct: 270 LKKLMLDTKGKSIVVIEDIDCSLELTEHRKKKKEEDEDKEEKKEAENLKRVSGNNESNVT 329
Query: 126 LSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLAS 185
LSGLLN IDGLWS+C DE+IIIFTTN + LDPAL+R GRMD HI MS+C FK+LA
Sbjct: 330 LSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDPALIRRGRMDYHIEMSYCRFEAFKVLAK 389
Query: 186 NYLGIAEHPLFVEIEKLIATAKVTPADVAEQLMRN---EAPEFALSGLIEFLESKKRAND 242
NYL H L+ EI +L+ V+PADVAE LM + + L++ LE +K+
Sbjct: 390 NYLENESHDLYGEIGRLLEEVDVSPADVAENLMPKSDEDDADICFRRLVKSLEEEKKKKI 449
Query: 243 GSEAKEAEERA---VQAEKK 259
EA++ +++A V+ EK+
Sbjct: 450 EKEARKNKKKAEDNVKQEKQ 469
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 123/264 (46%), Positives = 172/264 (65%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L F + FY++ G+AWKRGYLLYGPPGTGKSSLIAAMANYL +D+YDLEL+ + N++
Sbjct: 227 LREFANGQGFYQKTGRAWKRGYLLYGPPGTGKSSLIAAMANYLGYDIYDLELTEVQNNSE 286
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLI-------AGYEQQKQYHIT 125
LR +L+ T +KSI+V+EDIDC I L R + + N + +G E+ +T
Sbjct: 287 LRKLLMKTSSKSIIVIEDIDCSISLTKR-GKNKKKNGSYEYDPGLTNGSGLEEPGS-SVT 344
Query: 126 LSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLAS 185
LSGLLNF DGLWS CG E+I +FTTNH E+LD AL+R GRMDMH++M C K+L
Sbjct: 345 LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDSALMRSGRMDMHVHMGFCKFPALKILLK 404
Query: 186 NYLGIAEHPL----FVEIEKLIATAKVTPADVAEQLMRNEAP-EFALSGLIEFLES---K 237
NYL + E + E+E+ + A++TPADV+E L+RN + E A+ ++ L+ K
Sbjct: 405 NYLRLEEEDMDSVVLKEMEECVEEAEITPADVSEVLIRNRSDAEKAVREIVSVLKERVVK 464
Query: 238 KRANDGSEAK--EAEERAVQAEKK 259
+R + G + K E +E +AE++
Sbjct: 465 RRKSVGLKKKKQEGQEEEEEAEEE 488
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 270 (100.1 bits), Expect = 6.5e-49, Sum P(2) = 6.5e-49
Identities = 54/120 (45%), Positives = 81/120 (67%)
Query: 120 KQYHITLSGLLNFIDGLWSSC-GDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPS 178
K + LSG+LNF D + SSC DERI++FT KE++DPA+LRPGR+D+HI+ C +
Sbjct: 298 KSTAVNLSGILNFTDSILSSCTADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDFT 357
Query: 179 GFKMLASNYLGIAEHPLFVEIEKLIAT-AKVTPADVAEQLMRNE-APEFALSGLIEFLES 236
FK LA+NYLG+ EH LF ++E + A ++PA++ E ++ N +P AL +I L++
Sbjct: 358 AFKTLANNYLGVKEHKLFSQVEGIFQNGASLSPAEIGELMIANRNSPTRALKHVINALQT 417
Score = 268 (99.4 bits), Expect = 6.5e-49, Sum P(2) = 6.5e-49
Identities = 45/80 (56%), Positives = 66/80 (82%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
LE FL+ K++Y R+G+ WKR YLLYGP GTGKSS +AAMAN+L +DVYD++LS ++ ++D
Sbjct: 213 LESFLKGKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMANFLDYDVYDIDLSKVVDDSD 272
Query: 73 LRHILIATENKSILVVEDID 92
L+ +L+ T KS++V+ED+D
Sbjct: 273 LKMLLLQTRGKSVIVIEDLD 292
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 105/192 (54%), Positives = 131/192 (68%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L+ F + + FY++ G+AWKRGYLLYGPPGTGKSS+IAAMANYL +D+YDLEL+ + N++
Sbjct: 219 LKDFAEGQVFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHSNSE 278
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRAR--AANPDFLIA-------------GYE 117
LR +L+ T +KSI+V+EDIDC I L +R + ++ + A G E
Sbjct: 279 LRKLLMKTSSKSIIVIEDIDCSINLTNRKKNSSNVSSQRSYYDAETRNGSGSGSGGSGEE 338
Query: 118 QQKQYHITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTP 177
ITLSGLLNF DGLWS CG ERI +FTTNH E+LDPALLR GRMDMHI MS C
Sbjct: 339 GGNGNTITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIYMSFCNF 398
Query: 178 SGFKMLASNYLG 189
K+L NYLG
Sbjct: 399 PSLKILLKNYLG 410
Score = 318 (117.0 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 72/148 (48%), Positives = 91/148 (61%)
Query: 124 ITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKML 183
ITLSGLLNF DGLWS CG ERI +FTTNH E+LDPALLR GRMDMHI MS C K+L
Sbjct: 345 ITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIYMSFCNFPSLKIL 404
Query: 184 ASNYLGIAEHPL----FVEIEKLIATAKVTPADVAEQLMRNEAP-EFALSGLIEFLESKK 238
NYLG + E+E ++ A++TPADV+E L++N E A+ L+E L+S+
Sbjct: 405 LKNYLGYGVEDINGDVLKEMEMVVEKAEMTPADVSEALIKNRRDKEKAIRELLEDLKSRG 464
Query: 239 RANDGSEAKEAEERAVQAEKKVLEISEE 266
N K+ + R LE+ EE
Sbjct: 465 ERN----VKDGKLRGGSGNLTELEVVEE 488
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 231 (86.4 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 56/124 (45%), Positives = 76/124 (61%)
Query: 124 ITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKML 183
+ LS LL+ + WS+ G R++IFTTN+KER D LL RM+M I M HC FK L
Sbjct: 267 VALSQLLSSLTWPWSN-GKARVVIFTTNNKERFDQTLLC--RMEMKIYMGHCCFEDFKTL 323
Query: 184 ASNYLGI-----AEHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKK 238
ASNYLGI A H L+ +I++LI VTP V E+LM+++ + AL L+ + SK+
Sbjct: 324 ASNYLGISHDNDAPHRLYPDIKRLIDGQAVTPGQVVEELMKSQDVDVALQSLVRYSSSKE 383
Query: 239 RAND 242
ND
Sbjct: 384 --ND 385
Score = 207 (77.9 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 39/84 (46%), Positives = 60/84 (71%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
++ F+ +++FY+RVG+ W R YLL+G PG GK+SL+AA+A YL FDVY++ + + D
Sbjct: 181 IDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKYLNFDVYNIT-QGVKTDFD 239
Query: 73 LRHILIATENKSILVVEDIDCCIE 96
R ++ E+ SIL+VEDID +E
Sbjct: 240 TRRLIRRVEDSSILLVEDIDTSLE 263
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 84/223 (37%), Positives = 124/223 (55%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+ + L L++ L ++
Sbjct: 205 IREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDD 264
Query: 72 DLRHILIATENKSILVVEDIDCCIELQDRLSRARAA-NPDFLIAGYEQQKQYHITLSGLL 130
L H+L +S++++ED+D LSR AA NP + Q +T SGLL
Sbjct: 265 RLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLAAENP------VKYQGLGRLTFSGLL 313
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGF-KMLASNYLG 189
N +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+D+ + HC+ +M Y G
Sbjct: 314 NALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGHCSRWQLTQMFQRFYPG 371
Query: 190 IAEHPLFVEI---EKLIATAKVTPADVAEQLM--RNEAPEFAL 227
A P E L AT +++PA V M +N+ PE A+
Sbjct: 372 QA--PSLAESFADRALQATTQISPAQVQGYFMLYKND-PEGAV 411
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 88/236 (37%), Positives = 132/236 (55%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+ + L L++ L ++
Sbjct: 205 IREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDD 264
Query: 72 DLRHILIATENKSILVVEDIDCCIELQDRLSRARAA-NPDFLIAGYEQQKQYHITLSGLL 130
L H+L +S++++ED+D LSR AA NP + Q +T SGLL
Sbjct: 265 RLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLAAENP------IKYQGLGRLTFSGLL 313
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGF-KMLASNYLG 189
N +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+DM + HC+ +M Y G
Sbjct: 314 NALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMFQRFYPG 371
Query: 190 ----IAEHPLFVEIEKLIATAKVTPADVAEQLM--RNEAPEFALSGLIEFLESKKR 239
+AE+ F + L AT +++PA V M +N+ P +G I+ ES +R
Sbjct: 372 QATSLAEN--FAD-RVLQATTQISPAQVQGYFMLYKND-P----AGAIQNAESLRR 419
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 298 (110.0 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 77/239 (32%), Positives = 129/239 (53%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
+++FL ++Y G ++RGYLLYGPPGTGKSS I A+A L+ + L L+ + +
Sbjct: 223 VKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDT 282
Query: 72 DLRHILIATENKSILVVEDIDCCIEL--QDRLSRARAANPDFLIAGYEQQKQYH------ 123
L +L +SI+++EDID I+ D +++ +AN + +G Q + Y+
Sbjct: 283 SLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSVS 342
Query: 124 -----ITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPS 178
+T SGLLN +DG+ +S G RI+ TTNH E+LD L+RPGR+D+ I + C+
Sbjct: 343 SGGSALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSY 400
Query: 179 GFKMLASNYLGIAEHPLFVEIEKLIATAKVTPADVAEQLMR--NEAPEFALSGLIEFLE 235
+ + + + L + + + K +PA + M N + E A++ L E ++
Sbjct: 401 QMEQMFLKFYP-TDFDLAKQFVEKLENYKFSPAQLQAYFMTYSNNSIE-AINNLNELIK 457
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 297 (109.6 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 67/175 (38%), Positives = 104/175 (59%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNNDLR 74
FL+ ++Y G ++RGYLLYGPPG+GK+S + A+A L +D+ L L+ L ++ L
Sbjct: 227 FLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLN 286
Query: 75 HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFID 134
H+L K+++++ED+D + R R+ F ++T SGLLN +D
Sbjct: 287 HLLSNVPPKAVVLLEDVDSAFQ-----GRERSGEVGF---------HANVTFSGLLNALD 332
Query: 135 GLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
G+ SS DERII TTNH E+LDPAL+RPGR+D+ + + TP + + + + G
Sbjct: 333 GVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYG 385
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 294 (108.6 bits), Expect = 6.7e-26, P = 6.7e-26
Identities = 78/223 (34%), Positives = 120/223 (53%)
Query: 14 ERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSN-LLGNND 72
+ F+ +Y G ++RGYL YGPPGTGKSS I+A+A++ + V L LS L ++
Sbjct: 226 QEFISSATWYADRGVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSERTLDDDR 285
Query: 73 LRHILIATENKSILVVEDIDCC-IELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLN 131
L H+L S++++EDID + +D +S +P + Q +T SGLLN
Sbjct: 286 LNHLLNTAPPNSVVILEDIDAAFVSREDPMSN----HPAY-------QGLSRVTFSGLLN 334
Query: 132 FIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGF-KMLASNYLGI 190
+DG+ +C +ER+ TTN+ ERLDPAL+RPGR+D + T KM + Y
Sbjct: 335 ALDGV--ACAEERLTFMTTNYVERLDPALIRPGRVDRKQYFGNATDGMLSKMFSRFYRQP 392
Query: 191 AEHPLFVEIEKLIATAK--VTPADVAEQ-LMRNEAPEFALSGL 230
++ L E K ++ K ++PA + LM + P AL +
Sbjct: 393 SDSVLADEFVKRVSEHKTELSPAMIQGHFLMYKQDPRAALDNI 435
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 79/212 (37%), Positives = 116/212 (54%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+ + L L++ L ++
Sbjct: 205 VREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDD 264
Query: 72 DLRHILIATENKSILVVEDIDCCIELQDRLSRARAA-NPDFLIAGYEQQKQYHITLSGLL 130
L H+L +S++++ED+D LSR AA NP + Q +T SGLL
Sbjct: 265 RLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLAAENP------VKYQGLGRLTFSGLL 313
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGF-KMLASNYLG 189
N +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+DM + +C+ +M Y G
Sbjct: 314 NALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDMKEYVGYCSHWQLTQMFQRFYPG 371
Query: 190 IAEHPLFVEI---EKLIATAKVTPADVAEQLM 218
A P E L T +++PA V M
Sbjct: 372 QA--PSLAEAFAGRVLQVTTQISPAQVQGYFM 401
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 79/213 (37%), Positives = 120/213 (56%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
++ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+ + L L++ L ++
Sbjct: 205 VQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDD 264
Query: 72 DLRHILIATENKSILVVEDIDCCIELQDRLSRARAA-NPDFLIAGYEQQKQYHITLSGLL 130
L H+L +S++++ED+D LSR A NP + Q +T SGLL
Sbjct: 265 RLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLAVENP------VKYQGLGRLTFSGLL 313
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGF-KMLASNYLG 189
N +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+D+ + +C+ +M Y G
Sbjct: 314 NALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPG 371
Query: 190 ----IAEHPLFVEIEKLIATAKVTPADVAEQLM 218
+AE+ F E L AT +++PA V M
Sbjct: 372 QAPSLAEN--FAE-HVLRATNQISPAQVQGYFM 401
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 79/213 (37%), Positives = 120/213 (56%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+ + L L++ L ++
Sbjct: 205 IREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDD 264
Query: 72 DLRHILIATENKSILVVEDIDCCIELQDRLSRARAA-NPDFLIAGYEQQKQYHITLSGLL 130
L H+L +S++++ED+D LSR A NP + Q +T SGLL
Sbjct: 265 RLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLAVENP------VKYQGLGRLTFSGLL 313
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGF-KMLASNYLG 189
N +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+D+ + +C+ +M Y G
Sbjct: 314 NALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPG 371
Query: 190 ----IAEHPLFVEIEKLIATAKVTPADVAEQLM 218
+AE+ F E L AT++++PA V M
Sbjct: 372 QAPSLAEN--FAE-HVLKATSQISPAQVQGYFM 401
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 287 (106.1 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 73/226 (32%), Positives = 124/226 (54%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNNDLR 74
F++ +Y + G ++RGYLLYGPPG GKSS I A+A L++ V L LS L ++ L
Sbjct: 209 FIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNLSERGLTDDRLN 268
Query: 75 HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFID 134
H+L +SI+++EDID ++ + ++A G + IT SGLLN +D
Sbjct: 269 HLLNVAPEQSIILLEDIDAAFVSREATPQQKSA-----FDGLNR-----ITFSGLLNCLD 318
Query: 135 GLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAEHP 194
G+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ + +CT + + N+ ++
Sbjct: 319 GVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLEEMFKNFFASSDTT 376
Query: 195 LFVEIEKLIAT--AKVTPADVAEQLMRNE--APEFALSGLIEFLES 236
E K + + +PA + M+++ +P+ + + E+
Sbjct: 377 KAEEFGKRVNSFGRSASPAQIQGFFMKHKLSSPQTVIDSCEDIWEN 422
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 284 (105.0 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 74/210 (35%), Positives = 116/210 (55%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
++ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+ + L LS+ L ++
Sbjct: 205 VKEFIDNPKWYIERGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDD 264
Query: 72 DLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLN 131
L ++L +SI+++ED+D +D A NP A Y Q +T SGLLN
Sbjct: 265 RLNYLLSVAPQQSIILLEDVDAAFVSRD----LAAENP----AMY--QGMGRLTFSGLLN 314
Query: 132 FIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIA 191
+DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ + HC+ + +
Sbjct: 315 ALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRGQLARMFQRFYP-E 371
Query: 192 EHPLFVE--IEKLIATAK-VTPADVAEQLM 218
+ P E E+ +A +K ++ A V M
Sbjct: 372 QPPAAAERFAEQALAVSKQISAAQVQGHFM 401
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 283 (104.7 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 76/211 (36%), Positives = 117/211 (55%)
Query: 13 LERFLQRKEFYRRVGKA-WKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGN 70
++ F+ ++Y GKA +RGYLLYGPPG GKSS I A+A L+ + L LS+ L +
Sbjct: 205 VKEFIDNPKWYIERGKAPVRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSD 264
Query: 71 NDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
+ L ++L +SI+++ED+D +D A NP A Y Q +T SGLL
Sbjct: 265 DRLNYLLSVAPQQSIILLEDVDAAFVSRD----LAAENP----AMY--QGMGRLTFSGLL 314
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGI 190
N +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ + HC+ + +
Sbjct: 315 NALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRGQLARMFQRFYP- 371
Query: 191 AEHPLFVE--IEKLIATAK-VTPADVAEQLM 218
+ P E E+ +A +K ++ A V M
Sbjct: 372 EQPPAAAERFAEQALAVSKQISAAQVQGHFM 402
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 283 (104.7 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 78/225 (34%), Positives = 118/225 (52%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
++ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L + + + LS+ L ++
Sbjct: 205 VKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDD 264
Query: 72 DLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLN 131
L H+L +SI+++ED+D ++ L NP Y Q +T SGLLN
Sbjct: 265 RLNHLLSVAPQQSIILLEDVDAAFVSRELLP---TENP----LAY--QGMGRLTFSGLLN 315
Query: 132 FIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL--- 188
+DG+ SS + RI+ TTN ERLDPAL+RPGR+D+ + HC+ + +
Sbjct: 316 ALDGVASS--EARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHWQLTQMFRRFYPQE 373
Query: 189 GIAEHPLFVEIEKLIATAKVTPADVAEQLMRNEA-PEFALSGLIE 232
AE F E + L A ++ A V M + P A+ + E
Sbjct: 374 SAAEADHFSE-QALAAHTDLSAAQVQGHFMLYKTDPAGAIKNIAE 417
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 284 (105.0 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 77/225 (34%), Positives = 124/225 (55%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELS-NLLGNNDLR 74
FL E+Y + G ++RGYLLYGPPG+GK+S I A+A L +++ L LS N L ++ L
Sbjct: 232 FLTSGEWYHKRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLN 291
Query: 75 HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFID 134
H++ N+SIL++ED+D +++ + +Q +T SGLLN +D
Sbjct: 292 HLMNHIPNRSILLLEDVDAAFNKREQTN--------------DQGFNNGVTFSGLLNALD 337
Query: 135 GLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAEH- 193
G+ S+ +E I TTNH E+LDPALLRPGR+D + + + T K + + E
Sbjct: 338 GVASA--EECITFMTTNHPEKLDPALLRPGRVDYKVMIDNATEHQVKRMFLRFYENEEEL 395
Query: 194 -PLFVEIEKLIATAKVTPADVAEQLMRNEA-PEFALSGLIEFLES 236
F+ + + V+ A + + N+ PE A++ +IE L++
Sbjct: 396 CEKFLAKYRKLNMQHVSTAQLQGLFVYNKRDPEAAIA-MIETLQN 439
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 281 (104.0 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 78/213 (36%), Positives = 120/213 (56%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+ + L L++ L ++
Sbjct: 205 IREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDD 264
Query: 72 DLRHILIATENKSILVVEDIDCCIELQDRLSRARAA-NPDFLIAGYEQQKQYHITLSGLL 130
L H+L +S++++ED+D LSR A NP + Q +T SGLL
Sbjct: 265 RLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLAVENP------IKYQGLGRLTFSGLL 313
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGF-KMLASNYLG 189
N +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ + +C+ +M Y G
Sbjct: 314 NALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPG 371
Query: 190 ----IAEHPLFVEIEKLIATAKVTPADVAEQLM 218
+AE+ F E L AT++++PA V M
Sbjct: 372 QAPSLAEN--FAE-HVLKATSEISPAQVQGYFM 401
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 279 (103.3 bits), Expect = 7.1e-24, P = 7.1e-24
Identities = 66/162 (40%), Positives = 96/162 (59%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND-LR 74
FL + +Y G ++RGYLLYGPPGTGKSS I A+A L +D+ L LS +D L
Sbjct: 269 FLATESWYHDRGIPYRRGYLLYGPPGTGKSSFIQAVAGELDYDIAILNLSERGMTDDRLN 328
Query: 75 HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFID 134
+L ++++++ED+D +R + D GY + ++T SGLLN +D
Sbjct: 329 RLLTIVPKRTLVLLEDVDAAFS-----NRRTQTDED----GY---RGANVTFSGLLNALD 376
Query: 135 GLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCT 176
G+ S+ +ERI+ TTNH ERLD AL+RPGR+DM + + T
Sbjct: 377 GVASA--EERIVFLTTNHVERLDEALVRPGRVDMTVRIGELT 416
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 172 (65.6 bits), Expect = 9.1e-24, Sum P(2) = 9.1e-24
Identities = 48/129 (37%), Positives = 68/129 (52%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
L F+ K++Y G ++RGYLLYGPPG+GK+S I +MA + + +S + + +
Sbjct: 264 LTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGKTSFILSMAGNFGKSISIMNMSKGIHDGN 323
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ I+ +ILV+EDID R + + A N D L T SGLLN
Sbjct: 324 IHSIIQKCNKDTILVLEDIDAVFV--KRKNNSAAGN-DVL------------TFSGLLNA 368
Query: 133 IDGLWSSCG 141
IDGL SS G
Sbjct: 369 IDGLASSDG 377
Score = 159 (61.0 bits), Expect = 9.1e-24, Sum P(2) = 9.1e-24
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 124 ITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKML 183
+T SGLLN IDGL SS D RI++ TTNH ERL PAL+RPGR+D+ + + + +++
Sbjct: 360 LTFSGLLNAIDGLASS--DGRILMMTTNHLERLSPALIRPGRIDLKVKFDYASNHQIELM 417
Query: 184 ASNYLGIAEHPLFVEIEKLIATAKVTPADV 213
+ H L I + +++ A +
Sbjct: 418 FKRFFDQKYHYLIDSINSKLENHQISTAQL 447
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 276 (102.2 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 71/181 (39%), Positives = 105/181 (58%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL--GN 70
++ FL R ++Y G ++R YLL+GPPG+GKSS I A+A L Y+L + NL+ G
Sbjct: 254 VQDFLSRHQWYADRGIPYRRTYLLHGPPGSGKSSFIHALAGELD---YNLAIVNLVERGL 310
Query: 71 ND--LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
D L ++L+ +SIL++ED+D + +S PD GY +T SG
Sbjct: 311 TDDKLANMLMRLPPRSILLLEDVDVAFGNRQEMS------PD----GYSGAT---VTYSG 357
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
LLN +DG+ + G++RI TTN+ ERLDPAL+RPGR+D+ + + TP L S +
Sbjct: 358 LLNVLDGM--AAGEDRIAFLTTNYVERLDPALIRPGRVDVKVRVGEATPEQAAELWSRFY 415
Query: 189 G 189
G
Sbjct: 416 G 416
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 273 (101.2 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 79/219 (36%), Positives = 119/219 (54%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELS-NLLGNNDLR 74
F++ ++Y G ++RGYLLYGPPG+GK+S I A+A L +++ L LS N L ++ L
Sbjct: 245 FMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLN 304
Query: 75 HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFID 134
H++ +SIL++EDID R++ EQ +T SGLLN +D
Sbjct: 305 HLMNNMPERSILLLEDIDAAFN-----KRSQTG---------EQGFHSSVTFSGLLNALD 350
Query: 135 GLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGF-KMLASNYLGIAEH 193
G+ SS +E I TTNH E+LD A++RPGR+D + + + TP KM Y G +
Sbjct: 351 GVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPYQVEKMFMKFYPGETDI 408
Query: 194 -PLFV----EIEKLIATAKVTPADVAEQLMRNEAPEFAL 227
FV E++ ++TA++ V M +AP AL
Sbjct: 409 CKKFVNSVKELDITVSTAQLQGLFV----MNKDAPHDAL 443
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 266 (98.7 bits), Expect = 8.6e-23, P = 8.6e-23
Identities = 71/218 (32%), Positives = 117/218 (53%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
++ F+ + +YR G ++RGYLLYG PG GKSSLI A+A L D+ + LS+ + +
Sbjct: 203 IKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDK 262
Query: 72 DLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLN 131
+ H+L KSIL++EDID ++ N D +T SGLLN
Sbjct: 263 QINHLLNNAPPKSILLIEDIDAAF-------KSHRDNVDS--NNNNSNNNNSLTYSGLLN 313
Query: 132 FIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGI- 190
+DG+ S G RI+ TTN E LD AL+R GR+D+ I +S+ T S L +++ +
Sbjct: 314 ALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVSNATKSQAAQLFTHFYNLP 371
Query: 191 AEHPLFVEIEKLIATAKVTPADVAEQLMRN-EAPEFAL 227
++ L + + + +++ + + L++ +PE A+
Sbjct: 372 TDNQLAIRFSENLHDHQLSMSQIQGFLLKYINSPEKAI 409
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 264 (98.0 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 66/210 (31%), Positives = 115/210 (54%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
++ FL ++Y G ++R YLL+GPPG GKSSLI A+A Y F++ + ++++ +D
Sbjct: 233 IQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFNICTININDIYLTDD 292
Query: 73 -LRHILIATENKSILVVEDIDCCIELQDRLSR-----ARAANPDFLIAGYEQQ---KQYH 123
H+L K+IL++EDID I + D + + +++ + G K
Sbjct: 293 RFIHLLATIPPKTILILEDIDF-IFINDPIMKYTNNDQNSSSNSSIFTGTNNHSTIKTLG 351
Query: 124 ITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKML 183
++ SGLLN +DG+ ++ +ERII TTN+ E+L P L+RPGR+DM I + + +K +
Sbjct: 352 VSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLIRPGRVDMKILIPYANIYQYKKM 409
Query: 184 ASNYLGIAEHPLFVEIEKLIATAKVTPADV 213
+ H L + K+ ++ A++
Sbjct: 410 FLRFFP-EHHELSNKFAKIFQDFNLSMAEI 438
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 264 (98.0 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 66/210 (31%), Positives = 115/210 (54%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
++ FL ++Y G ++R YLL+GPPG GKSSLI A+A Y F++ + ++++ +D
Sbjct: 233 IQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFNICTININDIYLTDD 292
Query: 73 -LRHILIATENKSILVVEDIDCCIELQDRLSR-----ARAANPDFLIAGYEQQ---KQYH 123
H+L K+IL++EDID I + D + + +++ + G K
Sbjct: 293 RFIHLLATIPPKTILILEDIDF-IFINDPIMKYTNNDQNSSSNSSIFTGTNNHSTIKTLG 351
Query: 124 ITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKML 183
++ SGLLN +DG+ ++ +ERII TTN+ E+L P L+RPGR+DM I + + +K +
Sbjct: 352 VSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLIRPGRVDMKILIPYANIYQYKKM 409
Query: 184 ASNYLGIAEHPLFVEIEKLIATAKVTPADV 213
+ H L + K+ ++ A++
Sbjct: 410 FLRFFP-EHHELSNKFAKIFQDFNLSMAEI 438
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 45/67 (67%), Positives = 55/67 (82%)
Query: 124 ITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKML 183
++LSGLL F+DGLWS+ +ERIIIFTTNHKE+LDPA LRPG+MD+HI M +CTP FK L
Sbjct: 27 VSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLRPGKMDVHILMDYCTPVVFKKL 86
Query: 184 ASNYLGI 190
+ YL I
Sbjct: 87 DALYLDI 93
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 248 (92.4 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 60/171 (35%), Positives = 100/171 (58%)
Query: 20 KEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNNDLRHILIA 79
++FY + G ++RGYLL+GPPGTGK+SL A+A+ K ++Y L + +L + +L +
Sbjct: 279 RDFYHQRGIPYRRGYLLHGPPGTGKTSLSLALASMFKLELYLLHVPSLANDGELESMFDE 338
Query: 80 TENKSILVVEDIDCC-IELQDRLSRARAANPDFLIAGYEQQKQYH------ITLSGLLNF 132
+ I+++EDID I ++ L+ AR D + + + + TLSGLLN
Sbjct: 339 LPPRCIILLEDIDAVGIPRRNELA-ARMTGLDDKDDDEDDEDEENGSGRGRSTLSGLLNV 397
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKML 183
+DG+ S G RI+ T+N ++LDPAL+RPGR+D I + + +++
Sbjct: 398 LDGVASQEG--RIVFMTSNLADKLDPALVRPGRIDRKIFLGNINQESARLM 446
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 62/164 (37%), Positives = 93/164 (56%)
Query: 20 KEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLEL--SNLLGNNDLRHIL 77
+++Y G ++RGYL GPPGTGK+SL +A+A D+Y L L N+ ++ LR +
Sbjct: 241 RQWYANHGIPYRRGYLFSGPPGTGKTSLSSALAGVFGLDIYVLSLLDPNISESHFLR-LF 299
Query: 78 IATENKSILVVEDIDCC-IEL----QDRLSRARAANPDFLI------AGYEQQKQYHITL 126
+ ++++EDID + L ++ ++ A+ D + A I+L
Sbjct: 300 SEVPTQCVVLLEDIDAAGMTLKRANEEPVTADTTASFDVMKKRARPGAPVPTSPPTPISL 359
Query: 127 SGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
S LLN IDG+ S G RI+I TTN + LDPAL+RPGR+DMHI
Sbjct: 360 SALLNAIDGVSSQEG--RILIMTTNAPQDLDPALIRPGRVDMHI 401
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 136 (52.9 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 120 KQYHITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCT 176
+Q I+LSGLLN IDG+ S G R++I TTN E LD AL+RPGR+D+ + S+ T
Sbjct: 438 EQKGISLSGLLNAIDGVASHEG--RVLIMTTNRPESLDDALIRPGRVDLQVAFSNAT 492
Score = 130 (50.8 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 13 LERFLQRK--EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSN-LLG 69
+ +LQ + +Y G +RGYL +GPPGTGK+SL A+A D+Y + L L
Sbjct: 299 MNEYLQPETPRWYANRGIPLRRGYLFHGPPGTGKTSLSFALAGVFGLDIYVVSLLEPQLS 358
Query: 70 NNDLRHILIATENKSILVVEDID 92
DL ++ + ++++EDID
Sbjct: 359 EEDLSNLFNCLPRRCVVLLEDID 381
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 51/128 (39%), Positives = 75/128 (58%)
Query: 30 WKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNNDLRHILIATENKSILVV 88
++RGYLLYGPPG GKSS I A+A L+ + L L++ L ++ L H+L +S++++
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 63
Query: 89 EDIDCCIELQDRLSRARAA-NPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSCGDERIII 147
ED+D LSR A NP + Q +T SGLLN +DG+ S+ + RI+
Sbjct: 64 EDVDAAF-----LSRDLAVENP------VKYQGLGRLTFSGLLNALDGVAST--EARIVF 110
Query: 148 FTTNHKER 155
TTNH +R
Sbjct: 111 MTTNHVDR 118
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 203 (76.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 60/180 (33%), Positives = 90/180 (50%)
Query: 13 LERFLQRKE--FYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSN-LLG 69
+ +LQ K +Y G +RGYL +GPPGTGK+SL A+A ++Y + L L
Sbjct: 286 MNEYLQPKTECWYSNRGIPLRRGYLFHGPPGTGKTSLSFALAGVFGLEIYVISLIEPQLS 345
Query: 70 NNDLRHILIATENKSILVVEDIDCC----IELQDRLSRARAANPDFLIAGYEQ------- 118
+ DL + + I+++EDID E + R ++ +A +
Sbjct: 346 DEDLSTLFNGLPRRCIVLLEDIDTAGMSRAEGEIRTETKTEGPSEWKVADLARALKVGRG 405
Query: 119 --QKQYHITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCT 176
Q I++SGLLN IDG+ + G RI I TTN E LD AL+R GR+D+ + + T
Sbjct: 406 HGDDQKGISMSGLLNVIDGVAAHEG--RIFIMTTNKPEILDEALIRSGRVDLQVAFRNAT 463
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 60/178 (33%), Positives = 96/178 (53%)
Query: 48 IAAMANYLKFDVYDLELSNL-LGNNDLRHILIATENKSILVVEDIDCCIELQDRLSRARA 106
+ ++A L+ + L L++ L ++ L H+L +S++++ED+D LSR A
Sbjct: 22 VLSLAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAF-----LSRDLA 76
Query: 107 A-NPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGR 165
NP + Q +T SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RPGR
Sbjct: 77 VENP------VKYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGR 128
Query: 166 MDMHINMSHCTPSGF-KMLASNYLG----IAEHPLFVEIEKLIATAKVTPADVAEQLM 218
+D+ + +C+ +M Y G +AE+ F E L AT +++PA V M
Sbjct: 129 VDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAEN--FAE-HVLRATNQISPAQVQGYFM 183
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 190 (71.9 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 75/237 (31%), Positives = 114/237 (48%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
+L+ + ++R+G +G LL GPPGTGK+ L A+A + S + G
Sbjct: 193 YLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGEADVTFLSISASQFIEMFVGVG 252
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+R L AT KS + ID EL D + R+R A L G+++++Q TL+ L
Sbjct: 253 AGRVRD-LFATAKKSAPSIIFID---EL-DAVGRSRGAG---LGGGHDEREQ---TLNQL 301
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L+ +DG S DE I++ TN + LDPALLRPGR D H+ + P ++
Sbjct: 302 LSEMDGFDSH--DEVIVMAATNRPDVLDPALLRPGRFDRHVVIDR--PDWRDREKILHVH 357
Query: 190 IAEHPLFVEIEKLIATAKVTPADVAEQL--MRNEAPEFAL--SGLIEFLESKKRAND 242
+ PL +++ L A+ TP L + NEA A + +E +RA D
Sbjct: 358 TRKIPLDKDVD-LAVIARGTPGMAGADLENLVNEAAILAARENAATVTMEHMERAKD 413
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 190 (71.9 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 84/259 (32%), Positives = 124/259 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ Y +G +G LL+G PGTGK+ L A+A + + S+ + G
Sbjct: 176 FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVG 235
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + + + +V ID E+ D + R R A L G+++++Q TL+ L
Sbjct: 236 ASRVRDLFEQAKKNAPCIVF-ID---EI-DAVGRQRGAG---LGGGHDEREQ---TLNQL 284
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG S+ G III TN + LDPALLRPGR D HI + +G K + +
Sbjct: 285 LVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGRKEILKVH-- 340
Query: 190 IAEHPLFVEIEKLIATAKVTPADVAEQL--MRNEAPEFALSGLIEFLESKKRANDGSEAK 247
+ PL +++ L A+ TP L M NEA L+ +KK N E +
Sbjct: 341 VKGKPLGDDVD-LDVLARRTPGFTGADLANMVNEA------ALLAARRNKKVINM-EEME 392
Query: 248 EAEERAVQA-EKKVLEISE 265
EA ER + EKK ISE
Sbjct: 393 EAIERVIAGPEKKSKVISE 411
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 190 (71.9 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 84/259 (32%), Positives = 124/259 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ Y +G +G LL+G PGTGK+ L A+A + + S+ + G
Sbjct: 176 FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVG 235
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + + + +V ID E+ D + R R A L G+++++Q TL+ L
Sbjct: 236 ASRVRDLFEQAKKNAPCIVF-ID---EI-DAVGRQRGAG---LGGGHDEREQ---TLNQL 284
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG S+ G III TN + LDPALLRPGR D HI + +G K + +
Sbjct: 285 LVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGRKEILKVH-- 340
Query: 190 IAEHPLFVEIEKLIATAKVTPADVAEQL--MRNEAPEFALSGLIEFLESKKRANDGSEAK 247
+ PL +++ L A+ TP L M NEA L+ +KK N E +
Sbjct: 341 VKGKPLGDDVD-LDVLARRTPGFTGADLANMVNEA------ALLAARRNKKVINM-EEME 392
Query: 248 EAEERAVQA-EKKVLEISE 265
EA ER + EKK ISE
Sbjct: 393 EAIERVIAGPEKKSKVISE 411
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 189 (71.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 78/261 (29%), Positives = 122/261 (46%)
Query: 15 RFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLL 68
+FL+ +FY R+G RG +L GPPGTGK+ L A A +L + LE+ +
Sbjct: 313 KFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGV 372
Query: 69 GNNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
G + +R L AT K+ + ID E+ D + +AR F G +++ TL+
Sbjct: 373 GPSRVRD-LFATARKNAPCIIFID---EI-DAIGKARGRGGQF---GSNDERES--TLNQ 422
Query: 129 LLNFIDGLWSSCGDERIIIFT-TNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLAS-- 185
LL +DG SS E I++F TN + LDPALLRPGR D I + G + +
Sbjct: 423 LLVEMDGFTSS---EHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVH 479
Query: 186 -NYLGIAEHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSG------LIEFLESKK 238
++ A++ + + T+ T AD+ + NE A ++ F ++ +
Sbjct: 480 LKHIKAADNIDLIAKRLAVLTSGFTGADIMN--VCNEGALIAARSNSNEVQMVHFEQAIE 537
Query: 239 RANDGSEAKEAEERAVQAEKK 259
R G E K R + E+K
Sbjct: 538 RVTAGLEKKS---RVLSPEEK 555
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 174 (66.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 64/220 (29%), Positives = 104/220 (47%)
Query: 65 SNLLGNNDLRHILIATENKSILVVEDIDCCIELQDRL-------SRARAANPDFLIAGYE 117
S L ++L + + I+++ED+DC Q R +A+P+ G
Sbjct: 345 SKSLDEDELMALFTDLPTRCIVLLEDVDCAGMSQKRTPGSSSNDDNGNSASPELQEQGEG 404
Query: 118 QQ-----------KQYHITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRM 166
++ ++LSGLLN IDG+ ++C + RI++ TTNH E+LDPAL+RPGR+
Sbjct: 405 NSSGTTTGGTGVFEKQGVSLSGLLNVIDGV-AAC-EGRILVMTTNHPEKLDPALVRPGRI 462
Query: 167 DMHINMSHCTPSGFKMLASNYLGIAEHPLFVE-IEKLIATAKVTPADVAEQLMRNEAPEF 225
D+ I H T S K L S E L V E+L + K+ A +A++ + +
Sbjct: 463 DLSIAFGHSTTSDIKELFSAIYSTLEGDLRVSPAERL--SPKLR-ARMAKRSSTSHSTNS 519
Query: 226 ALSGLIEFLESKKRANDGSE--AKEAEERAVQAEKKVLEI 263
+ ++ E++K + + A E ER E EI
Sbjct: 520 TNANVVIHKETRKFSEEQIRLWAAEFAERVPAGEFTPAEI 559
Score = 152 (58.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 40/123 (32%), Positives = 64/123 (52%)
Query: 20 KEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNNDLRHILI 78
+ +Y G ++RGYLL+GPPGTGK+SL A A L ++Y L LS+ L ++L +
Sbjct: 299 RRWYNNRGIPYRRGYLLHGPPGTGKTSLCFAAAGLLGLELYLLNLSSKSLDEDELMALFT 358
Query: 79 ATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGLWS 138
+ I+++ED+DC Q R + + + + A E Q+Q SG G++
Sbjct: 359 DLPTRCIVLLEDVDCAGMSQKRTPGSSSNDDNGNSASPELQEQGEGNSSGTTTGGTGVFE 418
Query: 139 SCG 141
G
Sbjct: 419 KQG 421
Score = 49 (22.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 47 LIAAMANYLKFDVYDLELSNLLGNNDLRH 75
LIAA A Y+ +Y+L + + ++RH
Sbjct: 64 LIAATARYIYSQLYNLFQEHCISTAEIRH 92
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 181 (68.8 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 80/260 (30%), Positives = 127/260 (48%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ E Y ++G +G LL GPPGTGK+ L A+A + + S+ + G
Sbjct: 196 FLKYPERYIKLGAKIPKGLLLVGPPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVG 255
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R L K + ID E+ D + ++RAA+ ++ G ++++Q TL+ L
Sbjct: 256 ASRVRD-LFENAKKEAPAIVFID---EI-DAIGKSRAASG--MMGGNDEREQ---TLNQL 305
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNYL 188
L +DG + I++ TN E LD ALLRPGR D + + G +L +
Sbjct: 306 LAEMDGFGTESSPV-IVLAATNRPEVLDAALLRPGRFDRQVLVDKPDFKGRCDILKVHMK 364
Query: 189 GIAEHPLFVEIEKLIA-TAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAK 247
+ P V++E + TA + AD+A + NEA L+G +SKK ++
Sbjct: 365 DVKISPK-VKVEDIARLTAGLAGADLANII--NEAA--LLAGR----DSKKYVEQ-NDLV 414
Query: 248 EAEERAVQA-EKKVLEISEE 266
EA ERA+ EKK I+E+
Sbjct: 415 EAVERAIAGLEKKSRRINEK 434
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 178 (67.7 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 76/251 (30%), Positives = 121/251 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKFDVYDLELSNL 67
+E L E + RVG +G LLYGPPGTGK+ L A+A N+LK V +
Sbjct: 155 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKV-VSSAIIDKY 213
Query: 68 LGNND--LRHIL-IATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
+G + +R + A E++ ++ D E+ D + R + G ++
Sbjct: 214 IGESARLIREMFNYAREHQPCIIFMD-----EI-DAIGGRRFSE------GTSADREIQR 261
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTP-SGFKML 183
TL LLN +DG + + G ++I+ TN + LDPALLRPGR+D I + S +L
Sbjct: 262 TLMELLNQLDG-FDNLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDIL 319
Query: 184 ASNYLGIAEHPLFVEIEKLIATAK-VTPADVAEQLMRNEAPEFALSGLIEFL---ESKKR 239
+ GIA+H ++ E ++ A+ AD+ + EA FA+ +++ + K
Sbjct: 320 KIHAAGIAKHGE-IDYEAIVKLAEGFNGADLRN--ICTEAGMFAIRAERDYVIHEDFMKA 376
Query: 240 ANDGSEAKEAE 250
SEAK+ E
Sbjct: 377 VRKLSEAKKLE 387
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 178 (67.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 77/260 (29%), Positives = 126/260 (48%)
Query: 15 RFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------ 68
+FL+ + + ++G +G LL GPPGTGK+ L A+A + + S+ +
Sbjct: 170 QFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGV 229
Query: 69 GNNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
G + +R + + + + ++ ID E+ D + R R A L G+++++Q TL+
Sbjct: 230 GASRVRDLFVQGKKNAPCIIF-ID---EI-DAVGRHRGAG---LGGGHDEREQ---TLNQ 278
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
LL +DG S+ G I+I TN + LDPALLRPGR D + + G +M+ +
Sbjct: 279 LLVEMDGFESNEGV--ILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGREMILKVHT 336
Query: 189 GIAEHPLFVEIEKLIATAKVTPADVAEQLMR--NEAPEFALSGLIEFLESKKRANDGSEA 246
+ PL +++ L A+ TP L NEA A F+E K D +A
Sbjct: 337 --KKTPLASDVD-LGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVEMK----DFDDA 389
Query: 247 KEAEERAVQAEKKVLEISEE 266
K+ V E++ + ISEE
Sbjct: 390 KDKVLMGV--ERRSMVISEE 407
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 178 (67.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 85/262 (32%), Positives = 124/262 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ + VG +G LL GPPGTGK+ L A+A + + S+ + G
Sbjct: 180 FLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVG 239
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R L K+ + ID E+ D + R R A L G+++++Q TL+ L
Sbjct: 240 ASRVRD-LFENAKKNAPCIIFID---EI-DAVGRQRGAG---LGGGHDEREQ---TLNQL 288
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG ++ G III TN + LDPALLRPGR D I + +G + + +
Sbjct: 289 LVEMDGFGANEGI--IIIAATNRPDILDPALLRPGRFDRQITVDRPDVNGREAVLKVHA- 345
Query: 190 IAEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSE 245
PL I L A A TP AD+ E L+ NEA L+ + KK+ D S+
Sbjct: 346 -RNKPLDENIN-LRAIATRTPGFSGADL-ENLL-NEA------ALVAARQDKKKI-DMSD 394
Query: 246 AKEAEERAVQAE-KKVLEISEE 266
EA +R + KK ISE+
Sbjct: 395 IDEATDRVIAGPAKKSRVISEK 416
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 178 (67.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 67/219 (30%), Positives = 107/219 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
++ FLQ Y+ +G +G LLYGPPGTGK+ L A+A + + S+ +
Sbjct: 178 IKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFV 237
Query: 69 --GNNDLRHILIATENKS--ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G + +R + + S I+ V++ID + R R A L G+++++Q
Sbjct: 238 GVGASRVRDLFEQAKQNSPCIIFVDEIDA-------VGRQRGAG---LGGGHDEREQ--- 284
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLA 184
TL+ LL +DG G I+I TN + LDPALLRPGR D I +S+ +G + +
Sbjct: 285 TLNQLLVEMDGFGDRAGV--ILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVL 342
Query: 185 SNYLGIAEHPLFVEIEKLIA-TAKVTPADVAEQLMRNEA 222
+ +++ L T +T AD+A + NEA
Sbjct: 343 RVHSKGKPMAADADLDGLAKRTVGMTGADLANVI--NEA 379
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 175 (66.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 77/252 (30%), Positives = 125/252 (49%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYDLELSNLLGNN 71
L E Y +G +G +LYG PGTGK+ L A+AN +L+ +L + LG+
Sbjct: 202 LTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL-IQKYLGDG 260
Query: 72 D--LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
R I +A EN SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 261 PRLCRQIFKVAGENAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TML 307
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI---NMSHCTPSGFKMLA 184
LLN +DG + GD ++I+ TN E LDPAL+RPGR+D I N T +
Sbjct: 308 ELLNQLDG-FDDRGDVKVIM-ATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIH 365
Query: 185 SNYLGIAEHPLFVEIEKLIATAK-VTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDG 243
++ + ++E V +E L+ T ++ AD+ Q M EA GL+ E + +
Sbjct: 366 TSKMNLSED---VNLETLVTTKDDLSGADI--QAMCTEA------GLLALRERRMQVT-A 413
Query: 244 SEAKEAEERAVQ 255
+ K+A+ER ++
Sbjct: 414 EDFKQAKERVMK 425
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 174 (66.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 70/245 (28%), Positives = 111/245 (45%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E + RVG +G LLYGPPGTGK+ L A+A+ L + + S ++
Sbjct: 157 IELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 216
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 217 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 271
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNYLGIA 191
+DG + S G ++I+ TN + LDPALLRPGR+D I + ++L + L IA
Sbjct: 272 MDG-FDSLGQVKMIM-ATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIA 329
Query: 192 EHPLFVEIEKLIATA-KVTPADVAEQLMRNEAPEFALSGLIEFL---ESKKRANDGSEAK 247
+H ++ E ++ + AD+ + EA FA+ E++ + K S+ K
Sbjct: 330 KHGE-IDYEAIVKLSDNFNGADLRN--VCTEAGLFAIRAEREYVIQGDFMKAVRKVSDNK 386
Query: 248 EAEER 252
+ E +
Sbjct: 387 KLESK 391
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 174 (66.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 75/251 (29%), Positives = 120/251 (47%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKFDVYDLELSNL 67
+E L E + RVG +G LLYGPPGTGK+ L A+A N+LK V +
Sbjct: 155 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKV-VSSAIIDKY 213
Query: 68 LGNND--LRHIL-IATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
+G + +R + A E++ ++ D E+ D + R + G ++
Sbjct: 214 IGESARLIREMFNYAREHQPCIIFMD-----EI-DAIGGRRFSE------GTSADREIQR 261
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTP-SGFKML 183
TL LLN +DG + G ++I+ TN + LDPALLRPGR+D I + S ++L
Sbjct: 262 TLMELLNQLDG-FDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEIL 319
Query: 184 ASNYLGIAEHPLFVEIEKLIATAK-VTPADVAEQLMRNEAPEFALSGLIEFL---ESKKR 239
+ GIA+H ++ E ++ + AD+ + EA FA+ +++ + K
Sbjct: 320 KIHASGIAKHGE-IDYEAIVKLGEGFNGADLRN--ICTEAGMFAIRAERDYVIHEDFMKA 376
Query: 240 ANDGSEAKEAE 250
SEAK+ E
Sbjct: 377 VRKLSEAKKLE 387
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 176 (67.0 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/262 (28%), Positives = 127/262 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
L +L+ ++++G +G L+ GPPGTGK+ L A+A K + + S+ +
Sbjct: 167 LVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFV 226
Query: 69 --GNNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITL 126
G + +R + + + ++ ID E+ D + R R A L G+++++Q TL
Sbjct: 227 GVGASRVRDMFEQAKKAAPCIIF-ID---EI-DAVGRQRGAG---LGGGHDEREQ---TL 275
Query: 127 SGLLNFIDGLWSSCGDERIIIFT-TNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLAS 185
+ +L +DG G+E II+ TN + LDPALLRPGR D + + G + +
Sbjct: 276 NQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332
Query: 186 NYLGIAEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEAPEFALSG------LIEFLE 235
++ PL +I+ I A+ TP AD+A + NEA FA G ++EF +
Sbjct: 333 VHM--RRVPLAPDIDAAII-ARGTPGFSGADLANLV--NEAALFAARGNKRVVSMVEFEK 387
Query: 236 SKKRANDGSEAKEAEERAVQAE 257
+K + G+E + Q E
Sbjct: 388 AKDKIMMGAERRSMVMTEAQKE 409
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 172 (65.6 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 50/150 (33%), Positives = 75/150 (50%)
Query: 23 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNNDLRHILIATEN 82
Y+RVG +G LLYGPPGTGK+ L AMA+ + + + +S ++ I E
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREM 222
Query: 83 KSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSCGD 142
+ ++ CI D + A G ++ TL LLN +DG + G+
Sbjct: 223 FNY--AKEHQPCIIFMDEID---AIGGRRFSQGTSADREIQRTLMELLNHLDG-FEELGN 276
Query: 143 ERIIIFTTNHKERLDPALLRPGRMDMHINM 172
+II+ TN + LDPAL+RPGR+D I +
Sbjct: 277 VKIIM-ATNRPDVLDPALVRPGRLDRKIEI 305
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 172 (65.6 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 50/150 (33%), Positives = 75/150 (50%)
Query: 23 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNNDLRHILIATEN 82
Y+RVG +G LLYGPPGTGK+ L AMA+ + + + +S ++ I E
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREM 222
Query: 83 KSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSCGD 142
+ ++ CI D + A G ++ TL LLN +DG + G+
Sbjct: 223 FNY--AKEHQPCIIFMDEID---AIGGRRFSQGTSADREIQRTLMELLNHLDG-FEELGN 276
Query: 143 ERIIIFTTNHKERLDPALLRPGRMDMHINM 172
+II+ TN + LDPAL+RPGR+D I +
Sbjct: 277 VKIIM-ATNRPDVLDPALVRPGRLDRKIEI 305
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 172 (65.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 72/239 (30%), Positives = 108/239 (45%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNNDLRHILIAT 80
E ++RVG +G LL+GPPGTGK+ L A+A+ L + + S ++ +
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233
Query: 81 ENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSC 140
E + D CI D + A G ++ TL LLN +DG + S
Sbjct: 234 EMFNY--ARDHQPCIVFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQLDG-FDSL 287
Query: 141 GDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTP-SGFKMLASNYLGIAEHPLFVEI 199
G ++I+ TN + LDPALLRPGR+D I + S ++L + I +H EI
Sbjct: 288 GKVKVIM-ATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHG---EI 343
Query: 200 EKLIATAKVTPADVAEQLMRN---EAPEFALSGLIEFL---ESKKRANDGSEAKEAEER 252
+ A K++ A L RN EA FA+ EF+ + K +AK E +
Sbjct: 344 D-FEAVVKLSDGFSAADL-RNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETK 400
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 172 (65.6 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 72/239 (30%), Positives = 108/239 (45%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNNDLRHILIAT 80
E ++RVG +G LL+GPPGTGK+ L A+A+ L + + S ++ +
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233
Query: 81 ENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSC 140
E + D CI D + A G ++ TL LLN +DG + S
Sbjct: 234 EMFNY--ARDHQPCIVFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQLDG-FDSL 287
Query: 141 GDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTP-SGFKMLASNYLGIAEHPLFVEI 199
G ++I+ TN + LDPALLRPGR+D I + S ++L + I +H EI
Sbjct: 288 GKVKVIM-ATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHG---EI 343
Query: 200 EKLIATAKVTPADVAEQLMRN---EAPEFALSGLIEFL---ESKKRANDGSEAKEAEER 252
+ A K++ A L RN EA FA+ EF+ + K +AK E +
Sbjct: 344 D-FEAVVKLSDGFSAADL-RNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETK 400
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 171 (65.3 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 63/203 (31%), Positives = 95/203 (46%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND--LR 74
E Y ++G G L+YGPPGTGK+ L+ A+AN + V E + LG +R
Sbjct: 162 ELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVR 221
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN SI+ ++++D R A G +++ Q I L LLN
Sbjct: 222 DVFRLARENSPSIIFIDEVDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 268
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG S + +I TN + LDPALLRPGR+D I +++ +
Sbjct: 269 MDGFDKSTNVK--VIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMN 326
Query: 193 HPLFVEIEKLIA-TAKVTPADVA 214
V IE + T K++ AD+A
Sbjct: 327 VSSDVNIESFVVRTDKISAADIA 349
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 171 (65.3 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 63/203 (31%), Positives = 95/203 (46%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND--LR 74
E Y ++G G L+YGPPGTGK+ L+ A+AN + V E + LG +R
Sbjct: 162 ELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVR 221
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN SI+ ++++D R A G +++ Q I L LLN
Sbjct: 222 DVFRLARENSPSIIFIDEVDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 268
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG S + +I TN + LDPALLRPGR+D I +++ +
Sbjct: 269 MDGFDKSTNVK--VIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMN 326
Query: 193 HPLFVEIEKLIA-TAKVTPADVA 214
V IE + T K++ AD+A
Sbjct: 327 VSSDVNIESFVVRTDKISAADIA 349
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 169 (64.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 58/196 (29%), Positives = 90/196 (45%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E + RVG +G LLYGPPGTGK+ L A+A+ + + + S ++
Sbjct: 156 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYI 215
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E D CI D + A G ++ TL LLN
Sbjct: 216 GESARLIREMFGY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 270
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNYLGIA 191
+DG + G ++I+ TN + LDPALLRPGR+D I + ++L + GIA
Sbjct: 271 LDG-FDELGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIA 328
Query: 192 EHPLFVEIEKLIATAK 207
+H ++ E ++ A+
Sbjct: 329 KHGE-IDYEAVVKLAE 343
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 168 (64.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 132 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 191
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 192 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 238
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 239 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 278
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 80/260 (30%), Positives = 124/260 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ + Y +G +G LL GPPGTGK+ L A+A + S + G
Sbjct: 280 FLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVG 339
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + ++K+ +V ID E+ D + R R A + G ++++Q T++ L
Sbjct: 340 ASRVRDLFEKAKSKAPCIVF-ID---EI-DAVGRQRGAG---MGGGNDEREQ---TINQL 388
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNYL 188
L +DG + G I++ TN + LD ALLRPGR D + + +G K+L +
Sbjct: 389 LTEMDGFSGNSGV--IVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSR 446
Query: 189 GIAEHPLFVEIEKLIA-TAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAK 247
G A V+ +K+ T T AD+ + LM NEA A E K+ + D E
Sbjct: 447 GKALGK-DVDFDKVARRTPGFTGADL-QNLM-NEAAILAARR-----ELKEISKD--EIS 496
Query: 248 EAEERAVQA-EKKVLEISEE 266
+A ER + EKK +SEE
Sbjct: 497 DALERIIAGPEKKNAVVSEE 516
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 173 (66.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 81/261 (31%), Positives = 127/261 (48%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLELSNL---LG 69
FL+ E ++++G RG +L GPPGTGK+ L A A F V E + +G
Sbjct: 420 FLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESGVPFFSVSGSEFVEMFVGVG 479
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R L A K+ + ID E+ D + ++R+A +F G ++++ TL+ +
Sbjct: 480 PSRVRD-LFANARKNTPCIIFID---EI-DAIGKSRSAK-NFS-GGNDERES---TLNQI 529
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG +S D+ +++ TN + LD AL+RPGR D HI++ T G K + +L
Sbjct: 530 LTEMDGFNTS--DQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMDGRKQIFRVHLK 587
Query: 190 --IAEHPLFVEIEKLIA-TAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEA 246
+ + + +L A T AD+A + NEA AL E ES +
Sbjct: 588 KIVTKEDMDYLTGRLSALTPGFAGADIANCV--NEA---ALVAARENAESVTMKH----F 638
Query: 247 KEAEERAVQA-EKKVLEISEE 266
+ A ER V EKK L +S E
Sbjct: 639 ERAIERVVGGLEKKSLVLSPE 659
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 64/221 (28%), Positives = 104/221 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLELSNLL---G 69
FL+ E + +G +G LL GPPGTGK+ L A+A K F E +L G
Sbjct: 318 FLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQG 377
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+R + A + ++ C+ D + A + ++ Y Q T++ L
Sbjct: 378 ARRVRDLFKAAKARAP--------CVIFIDEIDSVGAKRTNSVLHPYANQ-----TINQL 424
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L+ +DG + G I++ TN ++ LD ALLRPGR D+ + +S +G K + S YL
Sbjct: 425 LSEMDGFHQNAGV--IVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLT 482
Query: 190 IAEHPLFVEIEKLI-ATAKVTPADVAEQLMRNEAPEFALSG 229
H ++++ L T+ T AD+ E ++ A A+ G
Sbjct: 483 KILHDE-IDLDMLARGTSGFTGADL-ENMINQAALRAAIDG 521
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 203 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 262
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 263 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 309
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 310 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 349
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 204 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 263
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 264 KLVRELFRVAEEHAPSIVFIDEIDAVG------TKRYDSN-----SGGEREIQR--TMLE 310
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 311 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 350
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 204 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 263
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 264 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 310
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 311 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 350
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 73 --LRHIL-IATEN-KSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 265 KLVRELFRVAEEHGPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 311
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 312 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 311
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 312 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 311
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 312 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 311
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 312 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 311
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 312 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 311
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 312 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 168 (64.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 311
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 312 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 170 (64.9 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 80/260 (30%), Positives = 124/260 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ + Y +G +G LL GPPGTGK+ L A+A + S + G
Sbjct: 268 FLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVG 327
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + ++K+ +V ID E+ D + R R A + G ++++Q T++ L
Sbjct: 328 ASRVRDLFEKAKSKAPCIVF-ID---EI-DAVGRQRGAG---MGGGNDEREQ---TINQL 376
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNYL 188
L +DG + G I++ TN + LD ALLRPGR D + + +G ++L +
Sbjct: 377 LTEMDGFSGNSGV--IVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSR 434
Query: 189 GIAEHPLFVEIEKLIA-TAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAK 247
G A V+ EK+ T T AD+ + LM NEA A E K+ + D E
Sbjct: 435 GKAIGK-DVDYEKVARRTPGFTGADL-QNLM-NEAAILAARR-----ELKEISKD--EIS 484
Query: 248 EAEERAVQA-EKKVLEISEE 266
+A ER + EKK +SEE
Sbjct: 485 DALERIIAGPEKKNAVVSEE 504
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 169 (64.5 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 79/266 (29%), Positives = 133/266 (50%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
L FL+ ++R+G G LL GPPGTGK+ L A+A K + + S+ +
Sbjct: 171 LVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFV 230
Query: 69 --GNNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITL 126
G + +R + + ++ ++ ID E+ D + R R A L G+++++Q TL
Sbjct: 231 GVGASRVRDMFDQAKKQAPCIIF-ID---EI-DAVGRHRGAG---LGGGHDEREQ---TL 279
Query: 127 SGLLNFIDGLWSSCGDERIIIFT-TNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLAS 185
+ LL +DG G E II+ TN + LDPALLRPGR D + + G + +
Sbjct: 280 NQLLVEMDGFE---GKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGREYILK 336
Query: 186 NYLGIAEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEAPEFALSGLIEFLESKKRAN 241
++ + PL ++ K A+ TP AD+A + NEA FA E+KK +
Sbjct: 337 VHMN--KLPLAKDV-KASVIARGTPGFSGADLANIV--NEAALFAAR------ENKKDVS 385
Query: 242 DGSEAKEAEERAVQ-AEKKVLEISEE 266
SE + A+++ + AE++ + +S++
Sbjct: 386 M-SEFERAKDKIMMGAERRSMVMSDD 410
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 165 (63.1 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 58/164 (35%), Positives = 85/164 (51%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 213 LTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGP 272
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID R A + G E++ Q T+
Sbjct: 273 KLVREMFKVAEEHAPSIVFIDEIDAV-----GTKRYEATS------GGEREIQR--TMLE 319
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
LLN +DG + S GD ++I+ TN + LDPAL+RPGR+D I +
Sbjct: 320 LLNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 165 (63.1 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 58/164 (35%), Positives = 85/164 (51%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E Y +G +G +LYGPPGTGK+ L A+AN V EL LG+
Sbjct: 213 LTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGP 272
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID R A + G E++ Q T+
Sbjct: 273 KLVREMFKVAEEHAPSIVFIDEIDAV-----GTKRYEATS------GGEREIQR--TMLE 319
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
LLN +DG + S GD ++I+ TN + LDPAL+RPGR+D I +
Sbjct: 320 LLNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 163 (62.4 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 141 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 200
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 201 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 255
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 256 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 295
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 163 (62.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 52/160 (32%), Positives = 76/160 (47%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L+ E + RVG +G LLYGPPGTGK+ L A+A L + + S ++
Sbjct: 148 IELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYI 207
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
I E ++ + C+ D + A G ++ TL LLN
Sbjct: 208 GESARIIREMFGY--AKEHEPCVIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 262
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
+DG + G +II+ TN + LDPALLRPGR+D I +
Sbjct: 263 MDG-FDYLGQTKIIM-ATNRPDTLDPALLRPGRLDRKIEI 300
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 163 (62.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 208
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 209 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 264 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 163 (62.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 208
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 209 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 264 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 163 (62.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 208
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 209 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 264 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 163 (62.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 208
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 209 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 264 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 163 (62.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 208
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 209 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 264 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 163 (62.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 208
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 209 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 264 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 163 (62.4 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 71/237 (29%), Positives = 106/237 (44%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNNDLRHILIAT 80
E + RVG +G LLYGPPGTGK+ L A+A+ L+ + + S ++ +
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIR 220
Query: 81 ENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSC 140
E D C+ D + A G ++ TL LLN +DG + +
Sbjct: 221 EMFGY--ARDHQPCVIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQMDG-FDTL 274
Query: 141 GDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNYLGIAEHPLFVEI 199
+II+ TN + LDPALLRPGR+D I + +G +L + I +H V+
Sbjct: 275 SKVKIIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHG-DVDY 332
Query: 200 EKLIATAKVTPADVAEQLMRN---EAPEFALSGLIEFLESK---KRANDGSEAKEAE 250
E A AK+ A L RN EA FA+ +++ + K EAK+ E
Sbjct: 333 E---AIAKLADGFNAADL-RNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKLE 385
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 166 (63.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 76/262 (29%), Positives = 129/262 (49%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
+L+ ++++G G L+ GPPGTGK+ L A+A K + + S+ + G
Sbjct: 174 YLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVG 233
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + + S ++ ID E+ D + R R A G+++++Q TL+ +
Sbjct: 234 ASRVRDMFEQAKKASPCIIF-ID---EI-DAVGRQRGAGVG---GGHDEREQ---TLNQM 282
Query: 130 LNFIDGLWSSCGDERIIIFT-TNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
L +DG G+E II+ TN + LDPALLRPGR D + + G + + ++
Sbjct: 283 LVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHM 339
Query: 189 GIAEHPLFVEIE-KLIA--TAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSE 245
+ PL ++E LIA T + AD+A + NEA FA G KR E
Sbjct: 340 --RKVPLANDVEPSLIARGTPGFSGADLANLV--NEAALFAARG-------NKRNVSMVE 388
Query: 246 AKEAEERAVQ-AEKKVLEISEE 266
+ A+++ + AE++ + +SEE
Sbjct: 389 FELAKDKIMMGAERRSMVMSEE 410
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 166 (63.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 76/262 (29%), Positives = 129/262 (49%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
+L+ ++++G G L+ GPPGTGK+ L A+A K + + S+ + G
Sbjct: 174 YLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVG 233
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + + S ++ ID E+ D + R R A G+++++Q TL+ +
Sbjct: 234 ASRVRDMFEQAKKASPCIIF-ID---EI-DAVGRQRGAGVG---GGHDEREQ---TLNQM 282
Query: 130 LNFIDGLWSSCGDERIIIFT-TNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
L +DG G+E II+ TN + LDPALLRPGR D + + G + + ++
Sbjct: 283 LVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHM 339
Query: 189 GIAEHPLFVEIE-KLIA--TAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSE 245
+ PL ++E LIA T + AD+A + NEA FA G KR E
Sbjct: 340 --RKVPLANDVEPSLIARGTPGFSGADLANLV--NEAALFAARG-------NKRNVSMVE 388
Query: 246 AKEAEERAVQ-AEKKVLEISEE 266
+ A+++ + AE++ + +SEE
Sbjct: 389 FELAKDKIMMGAERRSMVMSEE 410
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 163 (62.4 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 155 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 214
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 215 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 269
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 270 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 309
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 163 (62.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 163 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 222
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 223 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 277
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 278 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 317
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 163 (62.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 163 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 222
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 223 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 277
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 278 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 317
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 163 (62.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 163 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 222
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 223 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 277
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD--MHINM 172
+DG + R+ +I TN + LDPALLRPGR+D +HI++
Sbjct: 278 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 317
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 167 (63.8 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 72/232 (31%), Positives = 108/232 (46%)
Query: 15 RFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------ 68
+FLQ E Y ++G RG +L GPPGTGK+ L A A Y + S +
Sbjct: 390 KFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYSVSGSEFVEMFVGV 449
Query: 69 GNNDLRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITL 126
G + +R + A EN SI+ V++ID I Q A AN E++ TL
Sbjct: 450 GASRVRDLFKTARENAPSIVFVDEIDA-IGKQRSKGNATGAND-------ERET----TL 497
Query: 127 SGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASN 186
+ LL +DG +S D +++ TN + LD AL+RPGR D H+++ + G K +
Sbjct: 498 NQLLVEMDGFDTS--DHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLGRKEIFDV 555
Query: 187 YLGIAEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEAPEFALSGLIEFL 234
+L ++ + A +TP AD+A + NEA A EF+
Sbjct: 556 HLQKITLQKDIDPDLSGRLAALTPGFSGADIAN--VCNEAALIAARYNAEFV 605
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 162 (62.1 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 52/161 (32%), Positives = 77/161 (47%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L E ++RVG +G LLYGPPGTGK+ L A+A+ L + + S+++
Sbjct: 149 IELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYI 208
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E + D CI D + A G ++ TL LLN
Sbjct: 209 GESARLIREMFNY--ARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 263
Query: 133 IDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMDMHINM 172
+DG + R+ +I TN + LDPALLRPGR+D I++
Sbjct: 264 MDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 165 (63.1 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 80/262 (30%), Positives = 122/262 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ + +G +G LL GPPGTGK+ L A A + + S+ + G
Sbjct: 179 FLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVG 238
Query: 70 NNDLRHILI-ATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+ +R + A +N L+ D E+ D + R R A L G+++++Q TL+
Sbjct: 239 ASRVRDLFENAKKNAPCLIFID-----EI-DAVGRQRGAG---LGGGHDEREQ---TLNQ 286
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
LL +DG S + III TN + LDPALLRPGR D I + G + + +
Sbjct: 287 LLVEMDGF--SANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHA 344
Query: 189 GIAEHPLFVEIE-KLIA--TAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSE 245
PL + K IA T + AD+ E L+ NEA L+ ++KK+ D +
Sbjct: 345 --RNKPLDETVNLKSIAMRTPGFSGADL-ENLL-NEA------ALVAARQNKKKI-DARD 393
Query: 246 AKEAEERAVQAE-KKVLEISEE 266
EA +R + KK IS++
Sbjct: 394 IDEATDRVIAGPAKKSRVISKK 415
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 166 (63.5 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 77/263 (29%), Positives = 127/263 (48%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLLG 69
FL+ + Y R+G RG LL G PGTGK+ L A+A ++ + +EL +G
Sbjct: 347 FLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVELYVGMG 406
Query: 70 NNDLRHILIATENK--SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+ +R + + + SI+ +++ID A++ + F + ++++Q TL+
Sbjct: 407 ASRVRDLFARAKKEAPSIIFIDEIDAV---------AKSRDGKFRMVSNDEREQ---TLN 454
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG SS I++ TN + LDPAL RPGR D + + G + + +
Sbjct: 455 QLLTEMDGFDSSSAV--IVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVH 512
Query: 188 LGIAEHPLFVEIEKL-IA--TAKVTPADVAEQLMRNEAPEFA--LSGL----IEFLESKK 238
+ E PL ++ IA T T AD+A + NEA A S + I+F+ + +
Sbjct: 513 VSKKELPLGDDVNLASIASMTTGFTGADLANLV--NEAALLAGRKSKMTVDKIDFIHAVE 570
Query: 239 RANDGSEAKEAEERAVQAEKKVL 261
R+ G E K A R +EK V+
Sbjct: 571 RSIAGIEKKTA--RLKGSEKAVV 591
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 162 (62.1 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 59/165 (35%), Positives = 86/165 (52%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYDL-ELSNLLGN 70
L E+Y +G +G +LYG PGTGK+ L A+AN +++ DL + + G
Sbjct: 203 LTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGA 262
Query: 71 NDLRHIL-IATENK-SILVVEDIDCC-IELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+R I +A E SI+ +++ID + D SR EQ+ Q TL
Sbjct: 263 RLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRG------------EQEVQR--TLL 308
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
LLN +DG + S GD +II+ TN + LDPAL+RPGR+D I +
Sbjct: 309 ELLNQLDG-FESRGDVKIIM-ATNRIDSLDPALIRPGRIDRKIEL 351
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 161 (61.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/160 (31%), Positives = 76/160 (47%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L+ E ++RVG +G LLYGPPGTGK+ L A+A + + S ++
Sbjct: 197 IELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYI 256
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
I E ++ + CI D + A G ++ TL LL
Sbjct: 257 GESARIIRE--MFAYAKEHEPCIIFMDEVD---AIGGRRFSEGTSADREIQRTLMELLTQ 311
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
+DG + + G +II+ TN + LDPALLRPGR+D + +
Sbjct: 312 MDG-FDNLGQTKIIM-ATNRPDTLDPALLRPGRLDRKVEI 349
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 161 (61.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/163 (34%), Positives = 89/163 (54%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYDLELSNLLGNN 71
L E+Y +G +G +LYG PGTGK+ L A+AN +L+ +L + LG+
Sbjct: 208 LTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSEL-IQKYLGDG 266
Query: 72 D--LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+R + +A EN SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 267 PKMVRELFRVAEENAPSIVFIDEIDAVG------TKRYDSN-----SGGEREIQR--TML 313
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++++ TN E LDPAL+RPGR+D I
Sbjct: 314 ELLNQLDG-FDSRGDVKVLM-ATNRIESLDPALIRPGRIDRKI 354
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 160 (61.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L+ E ++RVG +G LLYGPPGTGK+ L A+A+ ++ + + S ++
Sbjct: 153 IELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYI 212
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E ++ + CI D + A G ++ TL LLN
Sbjct: 213 GESARLIREMFGY--AKEHEPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 267
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
+DG + G +II+ TN + LDPALLR GR+D I +
Sbjct: 268 LDG-FDYLGKTKIIM-ATNRPDTLDPALLRAGRLDRKIEI 305
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 160 (61.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNND 72
+E L + + RVG + +G LLYGPPGTGK+ L A+A+ + + + S ++
Sbjct: 158 IELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYI 217
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ E D CI D + A G ++ TL LLN
Sbjct: 218 GESARLIRE--MFAYARDHQPCIIFMDEID---AIGGRRFSEGTSADREIQRTLMELLNQ 272
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
+DG + + G ++I+ TN + LDPALLRPGR+D + +
Sbjct: 273 MDG-FDALGQVKMIM-ATNRPDTLDPALLRPGRLDRKLEI 310
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 160 (61.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 56/166 (33%), Positives = 89/166 (53%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G +LYGPPGTGK+ L A+A++ + + S L+
Sbjct: 160 IELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYI 219
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G+ +R + + A E+ SI+ +++ID SR ++ G + + Q
Sbjct: 220 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGS-----SRVEGSS------GGDSEVQR-- 266
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG SS D +II+ TN + LDPALLRPGR+D I
Sbjct: 267 TMLELLNQLDGFESS-KDIKIIM-ATNRLDILDPALLRPGRIDRKI 310
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 160 (61.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 55/162 (33%), Positives = 82/162 (50%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND 72
L E Y+++G RG LLYGPPGTGK+ L A+AN+ V E + LG
Sbjct: 175 LTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGP 234
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A EN +I+ ++++D ++ AR G +++ Q L
Sbjct: 235 RMVRDVFRLAKENAPAIIFIDEVDA-------IATARFDAQ----TGADREVQR--ILME 281
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + + +I TN + LDPALLRPGR+D I
Sbjct: 282 LLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLDRKI 321
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 160 (61.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 57/162 (35%), Positives = 86/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYG PGTGK+ L A+AN V EL LG+
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 311
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 312 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 160 (61.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 57/162 (35%), Positives = 86/162 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E+Y +G +G +LYG PGTGK+ L A+AN V EL LG+
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A E+ SI+ +++ID ++ +N +G E++ Q T+
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIG------TKRYDSN-----SGGEREIQR--TMLE 311
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 312 LLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 159 (61.0 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/191 (30%), Positives = 91/191 (47%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI---AAMANYLKFDVYDLELSNLLGNNDL 73
+ KE + ++G +G LLYGPPGTGK+ + AA N + +L + +
Sbjct: 191 MTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 250
Query: 74 RHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFI 133
+ + A + L E C I + D + D ++G ++ T+ LLN +
Sbjct: 251 KLVRDAFQ----LAKEKAPCIIFI-DEIDAIGTKRFDSEVSG---DREVQRTMLELLNQL 302
Query: 134 DGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNYLGIA 191
DG +SS DERI +I TN + LDPAL+R GR+D I H T ++L + +
Sbjct: 303 DG-FSS--DERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMN 359
Query: 192 EHPLFVEIEKL 202
HP V E+L
Sbjct: 360 VHP-DVNFEEL 369
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 159 (61.0 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 54/158 (34%), Positives = 75/158 (47%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E Y +G +G +LYG PGTGK+ L A+AN V EL LG+
Sbjct: 208 LTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGP 267
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
L+ + V +D+ I D + D G +++ T+ LLN
Sbjct: 268 K---LV---RELFRVADDLSPSIVFIDEIDAVGTKRYDANSGG---EREIQRTMLELLNQ 318
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
+DG + S GD ++I+ TN E LDPALLRPGR+D I
Sbjct: 319 LDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKI 354
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 159 (61.0 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 54/158 (34%), Positives = 75/158 (47%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E Y +G +G +LYG PGTGK+ L A+AN V EL LG+
Sbjct: 208 LTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGP 267
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
L+ + V +D+ I D + D G +++ T+ LLN
Sbjct: 268 K---LV---RELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGG---EREIQRTMLELLNQ 318
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
+DG + S GD ++I+ TN E LDPALLRPGR+D I
Sbjct: 319 LDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKI 354
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 76/262 (29%), Positives = 127/262 (48%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLLG 69
FL+ E Y R+G RG LL G PGTGK+ L A+A ++ + +EL +G
Sbjct: 343 FLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMG 402
Query: 70 NNDLRHILIATENK--SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+ +R + + + SI+ +++ID A++ + F + ++++Q TL+
Sbjct: 403 ASRVRDLFARAKKEAPSIIFIDEIDAV---------AKSRDGKFRMGSNDEREQ---TLN 450
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG S+ I++ TN + LDPAL RPGR D + + G + + +
Sbjct: 451 QLLTEMDGFDSNSAV--IVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVH 508
Query: 188 LGIAEHPLFVEIEK-LIA--TAKVTPADVAEQLMRNEAPEFA----LSGL--IEFLESKK 238
+ E PL ++ IA T T AD+A + NEA A + + I+F+++ +
Sbjct: 509 VSKKELPLGDDVNLGSIASMTTGFTGADLANLV--NEAALLAGRKNKTNVEKIDFIQAVE 566
Query: 239 RANDGSEAKEAE----ERAVQA 256
R+ G E K A E+AV A
Sbjct: 567 RSIAGIEKKSARLKGNEKAVVA 588
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 162 (62.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 79/267 (29%), Positives = 123/267 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ Y ++G RG +L GPPGTGK+ L A A Y + S + G
Sbjct: 366 FLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVG 425
Query: 70 NNDLRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+R + A EN SI+ +++ID + +AR +F A E++ TL+
Sbjct: 426 AARVRDLFKTARENAPSIVFIDEIDA-------IGKARQKG-NFSGANDEREN----TLN 473
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLAS-- 185
+L +DG + D +++ TN + LD ALLRPGR D HIN+ G K + +
Sbjct: 474 QMLVEMDGFTPA--DHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVH 531
Query: 186 -NYLGIAEHPLFVEIEKLIA-TAKVTPADVAE-----QLMRNEAPEFALSGLIEFLESKK 238
++L +A +F +L A T + AD+A L+ + E A+ L F ++ +
Sbjct: 532 LHHLKLAGE-IFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVK-LNHFEQAIE 589
Query: 239 RANDGSEAKEAEERAVQAEKKVLEISE 265
R G E K + EKKV+ E
Sbjct: 590 RVIGGVERKS--KLLSPEEKKVVAYHE 614
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 160 (61.4 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 78/266 (29%), Positives = 128/266 (48%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
+L+ ++++G G L+ GPPGTGK+ L A+A K + + S+ + G
Sbjct: 175 YLRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVG 234
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + KS + ID E+ D + R R A L G+++++Q TL+ +
Sbjct: 235 ASRVRD-MFEQAKKSAPCIIFID---EI-DAVGRQRGAG---LGGGHDEREQ---TLNQM 283
Query: 130 LNFIDGLWSSCGDERIIIFT-TNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
L +DG G+E II+ TN + LD ALLRPGR D + + G + + ++
Sbjct: 284 LVEMDGFE---GNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGREQILKVHM 340
Query: 189 GIAEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEAPEFALSG--LIEFLESKKRAND 242
+ PL ++ K A+ TP AD+A + NEA FA G + +E +RA D
Sbjct: 341 --RKVPLSEDV-KASVIARGTPGFSGADLANLV--NEAALFAARGNRRVVGMEEFERAKD 395
Query: 243 GSEAKEAEERAV---QAEKKVLEISE 265
AE R++ +AEK++ E
Sbjct: 396 -KIMMGAERRSMVMSEAEKEMTAYHE 420
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 157 (60.3 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 53/159 (33%), Positives = 83/159 (52%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYDLELSNLLGNND--L 73
+ Y+++G RG LLYGPPGTGK+ L+ A+AN +++ + + + LG +
Sbjct: 190 DLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEF-VQKYLGEGPRMV 248
Query: 74 RHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLN 131
R + +A EN +I+ +++ID R A G +++ Q I L LLN
Sbjct: 249 RDVFRMARENSPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE-LLN 295
Query: 132 FIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
+DG + + +I TN + LDPALLRPGR+D I
Sbjct: 296 QMDGFEQTSNVK--VIMATNRADTLDPALLRPGRLDRKI 332
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 156 (60.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 55/162 (33%), Positives = 83/162 (51%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND 72
L + + Y ++G RG LLYGPPGTGK+ L+ A+AN K V E + LG
Sbjct: 192 LVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGP 251
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A EN SI+ ++++D + + A+ G +++ Q I +
Sbjct: 252 RMVRDVFRLARENAPSIIFIDEVD---SIATKRFDAQT--------GSDREVQ-RILIE- 298
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LL +DG S + +I TN + LDPALLRPGR+D I
Sbjct: 299 LLTQMDGFDQSTNVK--VIMATNRADTLDPALLRPGRLDRKI 338
Score = 36 (17.7 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 222 APEFALSGLIEFLESKKRANDGSEAKEAEERAVQAEKKVL 261
APE L LI +S A + +EA RAV+ + V+
Sbjct: 363 APEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVI 402
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 159 (61.0 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 69/215 (32%), Positives = 102/215 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYDLELSNL---LG 69
FL++ E + VG +G LL GPPGTGK+ L IA A F + E + +G
Sbjct: 190 FLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVG 249
Query: 70 NNDLRHILI-ATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+ +R + A EN L+ D E+ D + R R A + G ++++Q TL+
Sbjct: 250 ASRVRDLFKKAKENAPCLIFID-----EI-DAVGRQRGAG---IGGGNDEREQ---TLNQ 297
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
LL +DG + G III TN + LD AL+RPGR D + + SG K + +
Sbjct: 298 LLTEMDGFEGNTGI--IIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHA 355
Query: 189 GIAEHPLFVEIEKLIA-TAKVTPADVAEQLMRNEA 222
+ V I+ + T + AD+A L NEA
Sbjct: 356 RNKKLAPEVSIDSIARRTPGFSGADLANLL--NEA 388
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 156 (60.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 54/163 (33%), Positives = 85/163 (52%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYDLELSNLLGNN 71
L + + Y ++G RG LLYGPPGTGK+ L+ A+AN +++ + + + LG
Sbjct: 175 LTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEF-VQKYLGEG 233
Query: 72 D--LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+R + +A EN +I+ +++ID R A G +++ Q I L
Sbjct: 234 PRMVRDVFRLARENSPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE 281
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + ++I+ TN + LDPALLRPGR+D I
Sbjct: 282 -LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLDRKI 321
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 156 (60.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 54/163 (33%), Positives = 85/163 (52%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYDLELSNLLGNN 71
L + + Y ++G RG LLYGPPGTGK+ L+ A+AN +++ + + + LG
Sbjct: 175 LTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEF-VQKYLGEG 233
Query: 72 D--LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+R + +A EN +I+ +++ID R A G +++ Q I L
Sbjct: 234 PRMVRDVFRLARENSPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE 281
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + ++I+ TN + LDPALLRPGR+D I
Sbjct: 282 -LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLDRKI 321
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 159 (61.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 66/215 (30%), Positives = 102/215 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYDLELSNL---LG 69
FL++ E + VG +G LL GPPGTGK+ L IA A F + E + +G
Sbjct: 238 FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVG 297
Query: 70 NNDLRHILI-ATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+ +R + A EN +V D E+ D + R R + G ++++Q TL+
Sbjct: 298 ASRVRDLFKKAKENAPCIVFVD-----EI-DAVGRQRGTG---IGGGNDEREQ---TLNQ 345
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
LL +DG + G I++ TN + LD ALLRPGR D +++ G + +
Sbjct: 346 LLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHS 403
Query: 189 GIAEHPLFVEIEKL-IATAKVTPADVAEQLMRNEA 222
G + V +E + + T + AD+A L NEA
Sbjct: 404 GNKKFESGVSLEVIAMRTPGFSGADLANLL--NEA 436
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 156 (60.0 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 50/164 (30%), Positives = 80/164 (48%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI---AAMANYLKFDVYDLELSNLLGNNDL 73
+ KE + ++G +G LLYGPPGTGK+ + AA N + +L + +
Sbjct: 190 MTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 249
Query: 74 RHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFI 133
+ + + L+ ++ CI D + D ++G ++ T+ LLN +
Sbjct: 250 KLV-----RDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSG---DREVQRTMLELLNQL 301
Query: 134 DGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMDMHINMSHCT 176
DG +SS D+RI +I TN + LDPAL+R GR+D I H T
Sbjct: 302 DG-FSS--DDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 342
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 158 (60.7 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 67/218 (30%), Positives = 112/218 (51%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ + + R+G +G LL GPPGTGK+ L A+A + + S+ + G
Sbjct: 174 FLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVG 233
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + + + +V ID E+ D + R R A G ++++Q TL+ L
Sbjct: 234 ASRVRDMFEQAKKNAPCIVF-ID---EI-DAVGRHRGAGYG---GGNDEREQ---TLNQL 282
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG ++ G II+ TN K+ LDPALLRPGR D ++ + + G + + LG
Sbjct: 283 LVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKI----LG 336
Query: 190 I--AEHPLFVEIE-KLIA--TAKVTPADVAEQLMRNEA 222
+ + PL +++ ++IA T + AD+A + NEA
Sbjct: 337 VHARKTPLGPDVDLRIIARGTPGFSGADLANLV--NEA 372
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 158 (60.7 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 67/218 (30%), Positives = 112/218 (51%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ + + R+G +G LL GPPGTGK+ L A+A + + S+ + G
Sbjct: 174 FLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVG 233
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + + + +V ID E+ D + R R A G ++++Q TL+ L
Sbjct: 234 ASRVRDMFEQAKKNAPCIVF-ID---EI-DAVGRHRGAGYG---GGNDEREQ---TLNQL 282
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG ++ G II+ TN K+ LDPALLRPGR D ++ + + G + + LG
Sbjct: 283 LVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKI----LG 336
Query: 190 I--AEHPLFVEIE-KLIA--TAKVTPADVAEQLMRNEA 222
+ + PL +++ ++IA T + AD+A + NEA
Sbjct: 337 VHARKTPLGPDVDLRIIARGTPGFSGADLANLV--NEA 372
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 155 (59.6 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 55/175 (31%), Positives = 89/175 (50%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 161 IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 220
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G+ +R + I A E+ SI+ +++ID SR + + G + + Q
Sbjct: 221 GEGSRMVRELFIMAREHAPSIIFMDEIDSIGS-----SRGESGS-----GGGDSEVQR-- 268
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG 179
T+ LLN +DG S+ + ++ TN + LDPALLRPGR+D I + +G
Sbjct: 269 TMLELLNQLDGFESTKNIK--VLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAG 321
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 158 (60.7 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 66/215 (30%), Positives = 102/215 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYDLELSNL---LG 69
FL++ E + VG +G LL GPPGTGK+ L IA A F + E + +G
Sbjct: 245 FLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVG 304
Query: 70 NNDLRHILI-ATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+ +R + A EN +V D E+ D + R R + G ++++Q TL+
Sbjct: 305 ASRVRDLFKKAKENAPCIVFVD-----EI-DAVGRQRGTG---IGGGNDEREQ---TLNQ 352
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
LL +DG + G I++ TN + LD ALLRPGR D +++ G + +
Sbjct: 353 LLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHA 410
Query: 189 GIAEHPLFVEIEKL-IATAKVTPADVAEQLMRNEA 222
G + V +E + + T + AD+A L NEA
Sbjct: 411 GNKKFDNDVSLEIIAMRTPGFSGADLANLL--NEA 443
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 155 (59.6 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 53/165 (32%), Positives = 79/165 (47%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKFDVYDLELSNL 67
+E L+ E + RVG +G LLYGPPGTGK+ L A+A N++ F +
Sbjct: 188 IELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFI-FSPASAIVDKY 246
Query: 68 LGNNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+G + R I + ++ + CI D + A G ++ TL
Sbjct: 247 IGES-ARLI-----REMFAYAKEHEPCIIFMDEVD---AIGGRRFSEGTSADREIQRTLM 297
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
LLN +DG + + G +II+ TN + LDPALLR GR+D I +
Sbjct: 298 ELLNQMDG-FDTLGQTKIIM-ATNRPDTLDPALLRAGRLDRKIEI 340
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 157 (60.3 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 76/259 (29%), Positives = 122/259 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ + ++++G +G LL GPPGTGK+ L A+A K + + S+ + G
Sbjct: 175 FLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVG 234
Query: 70 NNDLRHILI-ATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+ +R + +N L+ D E+ D + R R G ++++Q TL+
Sbjct: 235 ASRVRDMFEQGKKNAPCLIFID-----EI-DAVGRHRGVG---FGGGNDEREQ---TLNQ 282
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
LL +DG ++ G III TN + LDPALLRPGR D I +S +G + + +L
Sbjct: 283 LLVEMDGFEANEGV--IIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKILEVHL 340
Query: 189 GIAEHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKE 248
+ P +E I A+ TP L N E S LI +KK + + +
Sbjct: 341 --KKIPTAPNVEVSII-ARGTPGFSGADLA-NLVNE---SALIAARRNKKVVTN-EDFEY 392
Query: 249 AEERAVQA-EKKVLEISEE 266
A ++ + E+K L + EE
Sbjct: 393 ARDKILMGMERKSLVMREE 411
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 155 (59.6 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYDLELSNLLGNN 71
L E Y +G +G +LYG PGTGK+ L A+AN +L+ +L + LG+
Sbjct: 224 LLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL-IQKYLGDG 282
Query: 72 D--LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+R I +A E+ SI+ +++ID + R + +G E++ Q T+
Sbjct: 283 PRLVRQIFQVAAEHAPSIVFIDEIDA-------IGTKRYDST----SGGEREIQR--TML 329
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG + GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 330 ELLNQLDG-FDDRGDVKVIM-ATNKIETLDPALIRPGRIDRKI 370
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 155 (59.6 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 73/253 (28%), Positives = 125/253 (49%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYDLELSNLLGNN 71
L E Y +G +G +LYG PGTGK+ L A+AN +L+ +L + LG+
Sbjct: 206 LTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL-IQKYLGDG 264
Query: 72 D--LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
R I IA ++ SI+ +++ID + R + +G E++ Q T+
Sbjct: 265 PRLCRQIFQIAADHAPSIVFIDEIDA-------IGTKRYEST----SGGEREIQR--TML 311
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI---NMSHCTPSGFKMLA 184
LLN +DG + GD ++I+ TN E LDPAL+RPGR+D I N T +
Sbjct: 312 ELLNQLDG-FDDRGDIKVIM-ATNKIESLDPALIRPGRIDRKILFENPDANTKKKILTIH 369
Query: 185 SNYLGIAEHPLFVEIEKLIATAK--VTPADVAEQLMRNEAPEFALSGLIEFLESKKRAND 242
++ + +A+ V +++++ T K ++ AD+ + + EA GL+ E + +
Sbjct: 370 TSKMSLADD---VNLDEIV-TGKDDLSGADI--KAICTEA------GLLALRERRMQVK- 416
Query: 243 GSEAKEAEERAVQ 255
+ K A+ER ++
Sbjct: 417 AEDFKSAKERVLK 429
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 154 (59.3 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 55/162 (33%), Positives = 81/162 (50%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND 72
L Y+++G RG LLYGPPGTGK+ L A+A++ V E + LG
Sbjct: 170 LTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGP 229
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A EN +I+ +++ID + + A+ A E Q+ L
Sbjct: 230 RLVRDVFRLARENSPAIIFIDEIDA---IATKRFDAQTG------ADREVQR----ILME 276
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG S + +I TN ++ LDPALLRPGR+D I
Sbjct: 277 LLNQMDGFDVSVNVK--VIMATNRQDTLDPALLRPGRLDRKI 316
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 158 (60.7 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 67/212 (31%), Positives = 102/212 (48%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ Y+++G +G +L GPPGTGK+ L A A + Y + S+ + G
Sbjct: 372 FLKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVG 431
Query: 70 NNDLRHILI-ATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+ +R + A N +V D E+ D + RAR+ G+ ++ + TL+
Sbjct: 432 PSRVRDLFKEARANTPCIVFID-----EI-DAVGRARSRG------GFHNDEREN-TLNQ 478
Query: 129 LLNFIDGLWSSCGDERIIIFT-TNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG S+ G +++F TN + LDPALLRPGR D I + G K + +
Sbjct: 479 LLVEMDGFSSTSG---VVVFAGTNRSDVLDPALLRPGRFDRQIYVGKPDIKGRKDIFMVH 535
Query: 188 L-GIAEHPLFVEIEKLIATAKVTP----ADVA 214
L I EI K +AT +TP AD+A
Sbjct: 536 LKNIKLDGEMEEIAKKLAT--LTPGFSGADIA 565
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 73/261 (27%), Positives = 121/261 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYDLELSNL---LG 69
FL+ +E ++ +G +G LL GPPGTGK+ L IA A F + E + +G
Sbjct: 177 FLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVG 236
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + + + ++ ID E+ D + R R A L G+++++Q TL+ +
Sbjct: 237 ASRVRDLFDQAKKNAPCIIF-ID---EI-DAVGRQRGAG---LGGGHDEREQ---TLNQI 285
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG I+I TN + LDPALLRPGR D + + +G + + +
Sbjct: 286 LVEMDGF--DTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGREAILK--IH 341
Query: 190 IAEHPLF--VEIEKLIA-TAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEA 246
PL V +E L T + AD+A L NEA A ++ + +
Sbjct: 342 AKGKPLADTVNLENLAKQTVGFSGADLANLL--NEAAILAA-------RKNRKVVETEDL 392
Query: 247 KEAEERAVQA-EKKVLEISEE 266
+E+ +R + E+K IS +
Sbjct: 393 EESIDRVIAGPERKSRRISTQ 413
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 153 (58.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 55/166 (33%), Positives = 85/166 (51%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E L+ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 148 IELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYI 207
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G+ +R + + A E+ SI+ +++ID R+ A + + E Q+
Sbjct: 208 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGS--SRIDSAGSGDS-------EVQR---- 254
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG + + II TN + LDPALLRPGR+D I
Sbjct: 255 TMLELLNQLDGFEPTKNIK--IIMATNRLDILDPALLRPGRIDRKI 298
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 153 (58.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 56/162 (34%), Positives = 81/162 (50%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFD---VYDLE-LSNLLGNND 72
L + + YR++G RG LLYGPPGTGK+ L+ A+AN + V E + LG
Sbjct: 154 LTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGP 213
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A EN +I+ +++ID R A G +++ Q I +
Sbjct: 214 RMVRDVFRMARENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILIE- 260
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LL +DG G +I TN + LDPALLRPGR+D I
Sbjct: 261 LLTQMDGF--DQGANVKVIMATNRADTLDPALLRPGRLDRKI 300
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 153 (58.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 56/166 (33%), Positives = 85/166 (51%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--KF-DVYDLEL-SNLL 68
+E ++ E + +G A +G +LYGPPGTGK+ L A+A++ KF V EL +
Sbjct: 164 IELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYI 223
Query: 69 GNND--LRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + R G + + Q
Sbjct: 224 GEGSRMVRELFVMAREHAPSIIFMDEIDS-------IGSTRVEGS----GGGDSEVQR-- 270
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG +S + II TN + LDPALLRPGR+D I
Sbjct: 271 TMLELLNQLDGFETSKNIK--IIMATNRLDILDPALLRPGRIDRKI 314
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 81/252 (32%), Positives = 118/252 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYDLELSNL---LG 69
FL+ + R+G RG LL GPPGTGK+ L +A AN F + + + +G
Sbjct: 285 FLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVG 344
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+R + A ++ ++ ID EL D + + R A A + +Q TL+ L
Sbjct: 345 AKRVRELFAAARKQAPSIIF-ID---EL-DAIGQKRNARD----AAHMRQ-----TLNQL 390
Query: 130 LNFIDGLWSSCGDERIIIF--TTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
L +DG + ++F TN E LDPAL RPGR D HI++ P LA
Sbjct: 391 LVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVP--LPDVRGRLAI-L 447
Query: 188 LGIAEH-PLFVEIE-KLIA--TAKVTPADVAEQLMRNEAPEFA---LSGLIEF--LE-SK 237
L H PL +++ +IA T+ AD+A + N+A +A LS + LE SK
Sbjct: 448 LQHTRHVPLGKDVDLSIIARGTSGFAGADLANLI--NQAAVYASKNLSTAVSMRDLEWSK 505
Query: 238 KRANDGSEAKEA 249
R G+E K A
Sbjct: 506 DRILMGAERKSA 517
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 75/249 (30%), Positives = 117/249 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYDLELSNL---LG 69
+L+ + + R+G +G LL GPPGTGK+ L IA A F E + +G
Sbjct: 245 YLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVG 304
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+R + A + S ++ ID E+ D + +R NP + Q+ +TL+ +
Sbjct: 305 ARRVRDLFSAAKKCSPCIIF-ID---EI-DAIGGSR--NP-------KDQQYMKMTLNQM 350
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G I++ TN E LD AL+RPGR D HI + + G + + +++
Sbjct: 351 LVELDGFKQNEGI--IVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMS 408
Query: 190 IAEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEAPEFALSG----LIEFLE-SKKRA 240
L E L+ A+ TP AD+A L+ A + A+ G + LE +K R
Sbjct: 409 KV---LKAEDVDLMIIARGTPGFSGADLAN-LVNVAALKAAMDGSKDVTMSDLEFAKDRI 464
Query: 241 NDGSEAKEA 249
GSE K A
Sbjct: 465 MMGSERKSA 473
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 153 (58.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 63/197 (31%), Positives = 92/197 (46%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA---NYLKFDVYDLEL-SNLLGNND 72
L+ E + +VG +G LLYGPPGTGK+ L A+A N V EL +G
Sbjct: 190 LKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGA 249
Query: 73 --LRHILIATENK--SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
++ I + K SI+ +++ID A D L G ++ TL
Sbjct: 250 SLVKDIFKLAKEKAPSIIFIDEIDAIA----------AKRTDALTGG---DREVQRTLMQ 296
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLA--S 185
LL +DG + + GD +II TN + LDPA+LRPGR D I + G ++L +
Sbjct: 297 LLAEMDG-FDARGDVKII-GATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHT 354
Query: 186 NYLGIAEHPLFVEIEKL 202
+ +AE EI K+
Sbjct: 355 RKMNLAEDVNLEEIAKM 371
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 153 (58.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 63/198 (31%), Positives = 94/198 (47%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L E Y +G +G +LYG PGTGK+ L A+AN V EL LG+
Sbjct: 211 LTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 270
Query: 73 --LRHILIATE--NKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + A E + SI+ +++ID R A + G E++ Q T+
Sbjct: 271 RLVRQLFNAAEEHSPSIVFIDEIDAI-----GTKRYDAQS------GAEREIQR--TMLE 317
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI---NMSHCTPSGFKMLAS 185
LLN +DG +S D ++I+ TN LDPAL+RPGR+D I N T + +
Sbjct: 318 LLNQLDGFDTSQRDIKVIM-ATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHT 376
Query: 186 NYLGIAEHPLFVEIEKLI 203
+ + + E V +E+LI
Sbjct: 377 SKMNLGED---VNLEELI 391
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/168 (31%), Positives = 82/168 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDL---ELSNLL- 68
L ++L+ + + ++G G LL GPPG GK+ + A+A Y + E +L
Sbjct: 445 LVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLV 504
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G+ +R + A NK S++ +++ID L R N D L Q+++
Sbjct: 505 GVGSARIRDLFKRAKVNKPSVIFIDEIDA---LATRRQGIFKENSDQLYNAATQERE--T 559
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
TL+ LL +DG G I + TN ++ LDPALLRPGR D I +
Sbjct: 560 TLNQLLIELDGF--DTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRV 605
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 78/268 (29%), Positives = 127/268 (47%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLLG 69
+L+ E Y+R+G RG LL GPPG GK+ L A+A +L + + +E+ LG
Sbjct: 359 YLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLG 418
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+R + + ++ ++ ID E+ D + R R+ G + TL+ L
Sbjct: 419 AARVRDLFKEGKKRAPCIIY-ID---EI-DAIGRQRSGTESM---GQGSSGESEQTLNQL 470
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG+ + G +++ +TN + LD ALLRPGR D HI + T + K + +L
Sbjct: 471 LVEMDGMATKEGV--LMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLS 528
Query: 190 IA--EHPLFVEIEKLIATAKVTP----ADVAEQLMRNEAPEFALSGLIEFLESK------ 237
E P ++L A++TP AD+A + NEA A + SK
Sbjct: 529 SVKLESPPTTFSQRL---ARLTPGFSGADIAN--VCNEAALHAARNTQMEVSSKNLEYAV 583
Query: 238 KRANDGSEAKEAEERAVQAEKKVLEISE 265
+R G+E K + ++ AE+KV+ E
Sbjct: 584 ERLVGGTE-KRSHALSL-AERKVIAYHE 609
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 130 (50.8 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNL-LGNN 71
++ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+ + L L++ L ++
Sbjct: 85 VQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDD 144
Query: 72 DLRHIL 77
L H+L
Sbjct: 145 RLNHLL 150
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 154 (59.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 64/219 (29%), Positives = 102/219 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLLG 69
FL+ + Y +G +G LL GPPGTGK+ L A A +L D +E+ +G
Sbjct: 340 FLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVG 399
Query: 70 NNDLRHILIATENK--SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+ +RH+ SI+ +++ID + RAR + G ++++ TL+
Sbjct: 400 PSRVRHLFQEARQAAPSIIFIDEIDA-------IGRARGRGG---LGGNDERES---TLN 446
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG ++ G +++ TN + LD ALLRPGR D I + G + Y
Sbjct: 447 QLLVEMDGFGTTAGV--VVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIY 504
Query: 188 LG---IAEHPLFVEIEKLIA-TAKVTPADVAEQLMRNEA 222
L + P + ++L A T AD+A + NEA
Sbjct: 505 LKKIKLDHEPSYYS-QRLAALTPGFAGADIAN--VCNEA 540
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 150 (57.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 60/202 (29%), Positives = 96/202 (47%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFD---VYDLE-LSNLLGNND--LR 74
E Y+++G RG L+YGPPG GK+ L A+A++ V E + LG +R
Sbjct: 184 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVR 243
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN +I+ +++ID R A G +++ Q I L LLN
Sbjct: 244 DVFRLAKENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 290
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG + + +I TN + LDPALLRPGR+D I +++ S
Sbjct: 291 MDGFDQTTNVK--VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMN 348
Query: 193 HPLFVEIEKLIATA-KVTPADV 213
V++E+ +A K++ AD+
Sbjct: 349 LSEDVDLEEFVARPDKISGADI 370
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 150 (57.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 66/227 (29%), Positives = 112/227 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 177 IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 236
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G+ +R + + A E+ SI+ +++ID + + + N D E Q+
Sbjct: 237 GEGSRMVRELFVMAREHAPSIIFMDEID---SIGSARMESGSGNGDS-----EVQR---- 284
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTP-SGFKML 183
T+ LLN +DG +S ++ ++ TN + LD ALLRPGR+D I + S F +L
Sbjct: 285 TMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDIL 342
Query: 184 A--SNYLGIAEHPLFVEIEKLIATAKVTPADVAE-QLMRNEAPEFAL 227
S + + ++++K+ K+ A AE + + EA FAL
Sbjct: 343 KIHSRKMNLMRG---IDLKKI--AEKMNGASGAELKAVCTEAGMFAL 384
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 150 (57.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 66/227 (29%), Positives = 112/227 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 177 IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 236
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G+ +R + + A E+ SI+ +++ID + + + N D E Q+
Sbjct: 237 GEGSRMVRELFVMAREHAPSIIFMDEID---SIGSARMESGSGNGDS-----EVQR---- 284
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTP-SGFKML 183
T+ LLN +DG +S ++ ++ TN + LD ALLRPGR+D I + S F +L
Sbjct: 285 TMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDIL 342
Query: 184 A--SNYLGIAEHPLFVEIEKLIATAKVTPADVAE-QLMRNEAPEFAL 227
S + + ++++K+ K+ A AE + + EA FAL
Sbjct: 343 KIHSRKMNLMRG---IDLKKI--AEKMNGASGAELKAVCTEAGMFAL 384
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 154 (59.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 66/226 (29%), Positives = 102/226 (45%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLL 68
+E L++ E ++ G RG LLYGPPGTGK+ + A+AN + V + +S
Sbjct: 369 IELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFY 428
Query: 69 GNND--LRHILI-AT-ENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G + LR I AT + SI+ ++++D R A N E +K+
Sbjct: 429 GETEARLRQIFAEATLRHPSIIFIDELDALCP-----KREGAQN--------EVEKR--- 472
Query: 125 TLSGLLNFIDGLWSSCGDERIIIF-TTNHKERLDPALLRPGRMDMHINMSHCTPSGFKML 183
++ LL +DG+ S + ++++ TN LD AL RPGR D I + + +
Sbjct: 473 VVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDI 532
Query: 184 ASNYLGIAEHPLFVEIEKLIATAKVTPADVAEQL--MRNEAPEFAL 227
L H L E+E L+ A V L + NEA +AL
Sbjct: 533 LQKLLQRVPH-LLTEVE-LLQLANSAHGYVGADLKALCNEAGLYAL 576
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 52/157 (33%), Positives = 77/157 (49%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF-DVYDLELSN-LLGNND 72
L+ E + R+G +G LLYGPPG K+ + A+AN L F + EL N +G ++
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 73 --LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
+R I K+ V I EL D L+ R ++ AG + L+ LL
Sbjct: 707 RAVREIF----RKARAVSPSIIFFDEL-DALAIERGSSSG---AGNVADR----VLAQLL 754
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMD 167
+DG+ D I+ TN +R+D AL+RPGR+D
Sbjct: 755 TEMDGI-EQLKDVTILA-ATNRPDRIDKALMRPGRID 789
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 149 (57.5 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 53/166 (31%), Positives = 87/166 (52%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + + S L+
Sbjct: 164 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 223
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G+ +R + + A E+ SI+ +++ID SR + + G + + Q
Sbjct: 224 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGS-----SRIESGS------GGDSEVQR-- 270
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LDPALLRPGR+D I
Sbjct: 271 TMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRIDRKI 314
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 149 (57.5 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 57/162 (35%), Positives = 80/162 (49%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA--NYLKF-DVYDLE-LSNLLGNND 72
L E Y+++G RG L+YGPPG GK+ L A+A F V E + LG
Sbjct: 181 LTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGP 240
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A EN SI+ +++ID R A G +++ Q I L
Sbjct: 241 RMVRDVFRLAKENSPSIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE- 287
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN +DG S + +I TN ++ LDPALLRPGR+D I
Sbjct: 288 LLNQMDGFDQSTNVK--VIMATNRQDTLDPALLRPGRLDRKI 327
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 73/251 (29%), Positives = 112/251 (44%)
Query: 15 RFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------ 68
+F E YRR G G LL GPPG GK+ L A+A + + + S +
Sbjct: 427 KFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGV 486
Query: 69 GNNDLRHILI-ATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
G + +R + A EN +V D EL D + R R LI G Q++ TL+
Sbjct: 487 GASRVRALYQEARENAPSVVFID-----EL-DAVGRERG-----LIKGSGGQER-DATLN 534
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG + G E I I +TN + LDPAL+RPGR D I + P +
Sbjct: 535 QLLVSLDG-FEGRG-EVITIASTNRPDILDPALVRPGRFDRKIFIPK--PGLIGRMEILQ 590
Query: 188 LGIAEHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAK 247
+ + P+ +++ + A A +T V +L E A ++ ++ +D +A
Sbjct: 591 VHARKKPMAEDLDYM-AVASMTDGMVGAELAN--IVEIAAINMMRDGRTELTTDDLLQAA 647
Query: 248 EAEERAVQAEK 258
+ EER + K
Sbjct: 648 QIEERGMLDRK 658
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 148 (57.2 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 53/166 (31%), Positives = 86/166 (51%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--KF-DVYDLEL-SNLL 68
+E ++ E + +G +G LLYGPPGTGK+ L A+A++ KF V EL +
Sbjct: 161 IELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYI 220
Query: 69 GNND--LRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R+ + +G +
Sbjct: 221 GEGSRMVRELFVMAREHAPSIIFMDEIDS-------IGSSRSDS-----SGGSGDSEVQR 268
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LDPALLRPGR+D I
Sbjct: 269 TMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRIDRKI 312
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND--LR 74
E Y+++G RG L+YGPPG GK+ L A+A++ V E + LG +R
Sbjct: 188 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 247
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN +I+ +++ID R A G +++ Q I L LLN
Sbjct: 248 DVFRLAKENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 294
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG + + +I TN + LDPALLRPGR+D I +++ S
Sbjct: 295 MDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMN 352
Query: 193 HPLFVEIEKLIATA-KVTPADV 213
V++E +A K++ AD+
Sbjct: 353 LSEEVDLEDYVARPDKISGADI 374
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND--LR 74
E Y+++G RG L+YGPPG GK+ L A+A++ V E + LG +R
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN +I+ +++ID R A G +++ Q I L LLN
Sbjct: 249 DVFRLAKENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 295
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG + + +I TN + LDPALLRPGR+D I +++ S
Sbjct: 296 MDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMN 353
Query: 193 HPLFVEIEKLIATA-KVTPADV 213
V++E +A K++ AD+
Sbjct: 354 LSEEVDLEDYVARPDKISGADI 375
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND--LR 74
E Y+++G RG L+YGPPG GK+ L A+A++ V E + LG +R
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN +I+ +++ID R A G +++ Q I L LLN
Sbjct: 249 DVFRLAKENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 295
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG + + +I TN + LDPALLRPGR+D I +++ S
Sbjct: 296 MDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMN 353
Query: 193 HPLFVEIEKLIATA-KVTPADV 213
V++E +A K++ AD+
Sbjct: 354 LSEEVDLEDYVARPDKISGADI 375
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND--LR 74
E Y+++G RG L+YGPPG GK+ L A+A++ V E + LG +R
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN +I+ +++ID R A G +++ Q I L LLN
Sbjct: 249 DVFRLAKENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 295
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG + + +I TN + LDPALLRPGR+D I +++ S
Sbjct: 296 MDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMN 353
Query: 193 HPLFVEIEKLIATA-KVTPADV 213
V++E +A K++ AD+
Sbjct: 354 LSEEVDLEDYVARPDKISGADI 375
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND--LR 74
E Y+++G RG L+YGPPG GK+ L A+A++ V E + LG +R
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN +I+ +++ID R A G +++ Q I L LLN
Sbjct: 249 DVFRLAKENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 295
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG + + +I TN + LDPALLRPGR+D I +++ S
Sbjct: 296 MDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMN 353
Query: 193 HPLFVEIEKLIATA-KVTPADV 213
V++E +A K++ AD+
Sbjct: 354 LSEEVDLEDYVARPDKISGADI 375
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND--LR 74
E Y+++G RG L+YGPPG GK+ L A+A++ V E + LG +R
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN +I+ +++ID R A G +++ Q I L LLN
Sbjct: 249 DVFRLAKENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 295
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG + + +I TN + LDPALLRPGR+D I +++ S
Sbjct: 296 MDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMN 353
Query: 193 HPLFVEIEKLIATA-KVTPADV 213
V++E +A K++ AD+
Sbjct: 354 LSEEVDLEDYVARPDKISGADI 375
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 148 (57.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND--LR 74
E Y+++G RG L+YGPPG GK+ L A+A++ V E + LG +R
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN +I+ +++ID R A G +++ Q I L LLN
Sbjct: 249 DVFRLAKENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 295
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG + + +I TN + LDPALLRPGR+D I +++ S
Sbjct: 296 MDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMN 353
Query: 193 HPLFVEIEKLIATA-KVTPADV 213
V++E +A K++ AD+
Sbjct: 354 LSEEVDLEDYVARPDKISGADI 375
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 151 (58.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLLGNND 72
L+R E ++ G + RG LLYGPPGTGK+ + A+AN + V + +S G ++
Sbjct: 338 LKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESE 397
Query: 73 --LRHILI--ATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
LR I + SI+ ++++D R A N E +K+ ++
Sbjct: 398 SRLRQIFAEASLRRPSIIFIDELDALCP-----KREGAQN--------EVEKR---VVAS 441
Query: 129 LLNFIDGLWSSCGDERIIIF-TTNHKERLDPALLRPGRMDMHINM 172
LL +DG+ S + ++++ TN LD AL RPGR D I +
Sbjct: 442 LLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEI 486
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 151 (58.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 65/225 (28%), Positives = 105/225 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLELSNLL---G 69
+L+ E Y R+G +G LL GPPGTGK+ L A+A + F E +L G
Sbjct: 266 YLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQG 325
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+R + + ++ ++ ID E+ D + R +N I Y Q T++ L
Sbjct: 326 ARRVRDLFDKAKARAPCIIF-ID---EI-DSVGSKRVSNS---IHPYANQ-----TINQL 372
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L+ +DG + G I+I TN + LD ALLRPGR D+ + + +G + + YL
Sbjct: 373 LSEMDGFTRNEGI--IVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLS 430
Query: 190 IAEHPLFVEIEKLIATAKV--TPADVAEQLMRNEAPEFALSGLIE 232
H ++ K++A T AD+ E ++ A + A +E
Sbjct: 431 KIVHSGGID-PKVLAKGSTGFTGADI-ENMVNQAALKAATDNAVE 473
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 151 (58.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 66/226 (29%), Positives = 101/226 (44%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLL 68
+E L++ E ++ G + RG LLYGPPGTGK+ + A+AN + V + +S
Sbjct: 363 IELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFY 422
Query: 69 GNND--LRHILI-AT-ENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G + LR I AT + SI+ ++++D R A N E +K+
Sbjct: 423 GETEARLRQIFAEATLRHPSIIFIDELDALCP-----KREGAQN--------EVEKR--- 466
Query: 125 TLSGLLNFIDGLWSSCGDERIIIF-TTNHKERLDPALLRPGRMDMHINMSHCTPSGFKML 183
++ LL +DG+ S + ++++ TN LD AL RPGR D I + +
Sbjct: 467 VVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDI 526
Query: 184 ASNYLGIAEHPLFVEIEKLIATAKVTPADVAEQL--MRNEAPEFAL 227
L H L E E L+ A V L + NEA +AL
Sbjct: 527 LQKLLRRVPH-LLTEAE-LLQLANSAHGYVGADLKALCNEAGLYAL 570
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 149 (57.5 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 77/259 (29%), Positives = 116/259 (44%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------GN 70
LQ Y+++G RG LL GPPGTGK+ L A+A + + S + G
Sbjct: 353 LQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGA 412
Query: 71 NDLRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + A +N SI+ ++++D R R+ N +++ Q TL+
Sbjct: 413 ARIRDLFNAARKNSPSIIFIDELDAVGG-----KRGRSFN--------DERDQ---TLNQ 456
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGF-KMLASNY 187
LL +DG S + I+I TN E LD AL RPGR + ++ G K+LA +
Sbjct: 457 LLTEMDGFESDT--KVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIHL 514
Query: 188 LGIA-EHPLFVEIEKLIATAKVTPADVAEQLMR--NEAPEFAL--SGLI----EFLESKK 238
+ E F+ I L+A+ +TP V L NEA A G + +E+ +
Sbjct: 515 RDVPLEEDAFL-ICDLVAS--LTPGFVGADLANIVNEAALLAARRGGEAVAREDIMEAIE 571
Query: 239 RANDGSEAKEAEERAVQAE 257
RA G KEA R + E
Sbjct: 572 RAKFGINDKEARPRTLGNE 590
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 150 (57.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 74/258 (28%), Positives = 117/258 (45%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-------YLKFDVYDLELS 65
L FL E + +G +G LL GPPGTGK+ L A+A Y+ +D E+
Sbjct: 330 LVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFD-EVY 388
Query: 66 NLLGNNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHIT 125
+G +R + +KS ++ ID EL D + A+ D A Y +Q T
Sbjct: 389 VGVGAKRVRELFNQARSKSPAIIF-ID---EL-DAIG-AKRNERD---AAYVKQ-----T 434
Query: 126 LSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLAS 185
L+ LL +DG S G II+ TN+ E LD AL RPGR D + + G +
Sbjct: 435 LNQLLTELDGFSQSTGV--IILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGRMDILK 492
Query: 186 NYLGIAEHPLFVEIEKLI-ATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGS 244
+++ + V++ + T+ + AD+ E L+ N+A FA +SK D
Sbjct: 493 HHMKNVQISTDVDVAVIARGTSGFSGADL-ENLV-NQAAIFASRNK----QSKVTPKDFD 546
Query: 245 EAKEAEERAVQAEKKVLE 262
AK+ +A ++++
Sbjct: 547 YAKDKIIMGAEARSRIIQ 564
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 146 (56.5 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 60/206 (29%), Positives = 98/206 (47%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFD---VYDLE-LSNLLGNND 72
L + Y+++G RG LL+GPPG GK+ L A+A++ V E + LG
Sbjct: 172 LTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGP 231
Query: 73 --LRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R + +A +N SI+ +++ID R A G +++ Q I L
Sbjct: 232 RMVRDLFRLAKQNSPSIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE- 278
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYL 188
LLN +DG + + +I TN + LDPALLRPGR+D I + +++ +
Sbjct: 279 LLNQMDGFDETTNIK--VIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTIT 336
Query: 189 GIAEHPLFVEIEKLIATA-KVTPADV 213
V++E +IA K++ AD+
Sbjct: 337 SKMNVGEDVDLEDIIARPDKISNADI 362
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 150 (57.9 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLL 68
+E L++ E ++ G RG LLYGPPGTGK+ + A+AN + V + +S
Sbjct: 369 IELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFY 428
Query: 69 GNND--LRHILI-AT-ENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G + LR I AT + SI+ ++++D ++ G + + + +
Sbjct: 429 GETEARLRQIFAEATLRHPSIIFIDELDALCPKRE---------------GAQSEVEKRV 473
Query: 125 TLSGLLNFIDGLWSSCGDERIIIF-TTNHKERLDPALLRPGRMDMHINM 172
S LL +DG+ S + R+++ TN + LD AL RPGR D I +
Sbjct: 474 VAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 150 (57.9 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 70/253 (27%), Positives = 117/253 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFD-VYD-----LELSNLLG 69
F++ +E Y +G +G LL GPPG+GK+ L A+A +Y +E+ G
Sbjct: 167 FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQG 226
Query: 70 NNDLRHILIATEN--KSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+R + + SI+ +++ID + + S + N AG Q+++ TL+
Sbjct: 227 AKRIRQLFAHARSVAPSIVFIDEIDA---IGGKRSSG-SVNG----AG---QREHDQTLN 275
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG ++ ++I TN + LD ALLRPGR D + + +G K + Y
Sbjct: 276 QLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILEIY 333
Query: 188 LGIAEHPLFVE-IEKLIATAKVTPADVAEQLMR--NEAPEFAL---SGLI---EFLESKK 238
+ + L +E IEK+ A++TP L NEA A L+ E E++
Sbjct: 334 IKKIKSDLKLEDIEKI---ARLTPGFSGADLENVVNEATILATRNNKSLVTINELYEARD 390
Query: 239 RANDGSEAKEAEE 251
+ + G E K +
Sbjct: 391 KVSMGPERKSLRQ 403
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 150 (57.9 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 70/253 (27%), Positives = 117/253 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFD-VYD-----LELSNLLG 69
F++ +E Y +G +G LL GPPG+GK+ L A+A +Y +E+ G
Sbjct: 167 FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQG 226
Query: 70 NNDLRHILIATEN--KSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+R + + SI+ +++ID + + S + N AG Q+++ TL+
Sbjct: 227 AKRIRQLFAHARSVAPSIVFIDEIDA---IGGKRSSG-SVNG----AG---QREHDQTLN 275
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG ++ ++I TN + LD ALLRPGR D + + +G K + Y
Sbjct: 276 QLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILEIY 333
Query: 188 LGIAEHPLFVE-IEKLIATAKVTPADVAEQLMR--NEAPEFAL---SGLI---EFLESKK 238
+ + L +E IEK+ A++TP L NEA A L+ E E++
Sbjct: 334 IKKIKSDLKLEDIEKI---ARLTPGFSGADLENVVNEATILATRNNKSLVTINELYEARD 390
Query: 239 RANDGSEAKEAEE 251
+ + G E K +
Sbjct: 391 KVSMGPERKSLRQ 403
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 150 (57.9 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 52/169 (30%), Positives = 82/169 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLL 68
+E L++ E ++ G RG LLYGPPGTGK+ + A+AN + V + +S
Sbjct: 369 IELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFY 428
Query: 69 GNND--LRHILI-AT-ENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G + LR I AT + SI+ ++++D R A N E +K+
Sbjct: 429 GETEAKLRQIFAEATLRHPSIIFIDELDALCP-----KREGAQN--------EVEKR--- 472
Query: 125 TLSGLLNFIDGLWSSCGDERIIIF-TTNHKERLDPALLRPGRMDMHINM 172
++ LL +DG+ S + ++++ TN LD AL RPGR D I +
Sbjct: 473 VVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 52/154 (33%), Positives = 74/154 (48%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF-DVYDLELSNLLGNNDL 73
L+ E + R+G +G LLYGPPG K+ + A+AN L F + EL N
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 74 RHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFI 133
R + T K+ V I EL D L+ R ++ L AG + L+ LL +
Sbjct: 707 RAVR-ETFRKARAVAPSIIFFDEL-DALAVERGSS---LGAGNVADR----VLAQLLTEM 757
Query: 134 DGLWSSCGDERIIIFTTNHKERLDPALLRPGRMD 167
DG+ D I+ TN +R+D AL+RPGR+D
Sbjct: 758 DGI-EQLKDVTILA-ATNRPDRIDKALMRPGRID 789
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 150 (57.9 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLL 68
+E L++ E ++ G RG LLYGPPGTGK+ + A+AN + V + +S
Sbjct: 369 IELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFY 428
Query: 69 GNND--LRHILI-AT-ENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G + LR I AT + SI+ ++++D ++ G + + + +
Sbjct: 429 GETEARLRQIFAEATLRHPSIIFIDELDALCPKRE---------------GAQSEVEKRV 473
Query: 125 TLSGLLNFIDGLWSSCGDERIIIF-TTNHKERLDPALLRPGRMDMHINM 172
S LL +DG+ S + R+++ TN + LD AL RPGR D I +
Sbjct: 474 VAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 49/157 (31%), Positives = 76/157 (48%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF-DVYDLELSN-LLGNND 72
L+ + + R+G +G LLYGPPG K+ + A+AN L F + EL N +G ++
Sbjct: 647 LKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 73 --LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
+R I K+ V I EL D L+ R ++ AG + L+ LL
Sbjct: 707 RAVREIF----RKARAVAPSIIFFDEL-DALAVERGSSSG---AGNVADR----VLAQLL 754
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMD 167
+DG+ ++ TN +R+D AL+RPGR+D
Sbjct: 755 TEMDGIEQL--KNVTVLAATNRPDRIDKALMRPGRID 789
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 56/166 (33%), Positives = 84/166 (50%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLL 68
+E L E Y +G +G +LYG PGTGK+ L A+AN V EL L
Sbjct: 200 IELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 259
Query: 69 GNND--LRHIL-IATE-NKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G+ +R + +A E SI+ +++ID + R + +G E++ Q
Sbjct: 260 GDGPKLVRELFRVADECAPSIVFIDEIDA-------VGTKRYDSQ----SGGEREIQR-- 306
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG + + D ++I+ TN E LDPAL+RPGR+D I
Sbjct: 307 TMLELLNQLDG-FDARTDVKVIM-ATNRIETLDPALIRPGRIDRKI 350
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 49/165 (29%), Positives = 88/165 (53%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLLG 69
+L+ + ++G RG LL GPPG GK+ L A+A ++ + + +E+ LG
Sbjct: 303 YLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGSEFVEVIGGLG 362
Query: 70 NNDLRHILIATENKS--ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+ +R + +++ I+ +++ID + + S A F G +++Q TL+
Sbjct: 363 ASRIRGLFKEARSRAPCIIYIDEIDA---IGRKRSEGAGAGGGFG-GGSGEEEQ---TLN 415
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
LL +DG+ S G+ +++ +TN + LD ALLRPGR D HI++
Sbjct: 416 QLLVEMDGMGS--GNGVVVLASTNRADVLDKALLRPGRFDRHISI 458
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 64/219 (29%), Positives = 101/219 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLLG 69
FLQ + Y +G +G LL GPPGTGK+ L A A +L D +E+ +G
Sbjct: 345 FLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVG 404
Query: 70 NNDLRHILIATEN--KSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+ +R++ SI+ +++ID + RAR G ++++ TL+
Sbjct: 405 PSRVRNLFQEARQCAPSIIFIDEIDA-------IGRARGRGG--FSGGNDERES---TLN 452
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG ++ G +++ TN + LD ALLRPGR D I + G + Y
Sbjct: 453 QLLVEMDGFGTTAGV--VVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIY 510
Query: 188 LG---IAEHPLFVEIEKLIA-TAKVTPADVAEQLMRNEA 222
L + P + ++L A T AD+A + NEA
Sbjct: 511 LKKIKLDHEPSYYS-QRLAALTPGFAGADIAN--VCNEA 546
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 76/233 (32%), Positives = 107/233 (45%)
Query: 16 FLQRKEFYRRVG-KAWKRGYLLYGPPGTGKSSLIAAMA---NYLKFDVYDLE-LSNLLGN 70
FL+ + Y+ +G K K+G +L GPPGTGK+ L A A N V E L +G
Sbjct: 117 FLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGV 176
Query: 71 NDLR-HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
R L A K+ + ID E+ D + R R +F G +Q+ TL+ L
Sbjct: 177 GPARVRDLFALARKNAPCILFID---EI-DAVGRKRGRG-NF--GGQSEQEN---TLNQL 226
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG ++ +I+ TN + LDPALLRPGR D I + G + +L
Sbjct: 227 LVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLR 284
Query: 190 IAEHPLFVEIEKLIAT-AKVTP----ADVAEQLMRNEAPEFALSGLIEFLESK 237
+ +E EKL A +TP ADVA + NEA A L + + K
Sbjct: 285 PLKLDSTLEKEKLARKLASLTPGFSGADVAN--VCNEAALIAARHLSDSINQK 335
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 66/219 (30%), Positives = 110/219 (50%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYDLELSNL---LG 69
FL+ ++ + ++G +G LL G PGTGK+ L IA AN F + + + +G
Sbjct: 176 FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVG 235
Query: 70 NNDLRHILIATENKS--ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+ +R + + + I+ V++ID + R R L G ++++Q TL+
Sbjct: 236 ASRVRDMFEQGKKHAPCIIFVDEIDA-------VGRHRGIG---LGGGNDEREQ---TLN 282
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG S+ G +II TN + LDPALLRPGR D + +S +G + + + +
Sbjct: 283 QLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKIIAVH 340
Query: 188 LGIAEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEA 222
+ PL +++ L A+ TP AD+A + NEA
Sbjct: 341 A--KKVPLAPDVD-LRVIARGTPGFSGADLANLV--NEA 374
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 66/219 (30%), Positives = 110/219 (50%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYDLELSNL---LG 69
FL+ ++ + ++G +G LL G PGTGK+ L IA AN F + + + +G
Sbjct: 176 FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVG 235
Query: 70 NNDLRHILIATENKS--ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+ +R + + + I+ V++ID + R R L G ++++Q TL+
Sbjct: 236 ASRVRDMFEQGKKHAPCIIFVDEIDA-------VGRHRGIG---LGGGNDEREQ---TLN 282
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG S+ G +II TN + LDPALLRPGR D + +S +G + + + +
Sbjct: 283 QLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKIIAVH 340
Query: 188 LGIAEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEA 222
+ PL +++ L A+ TP AD+A + NEA
Sbjct: 341 A--KKVPLAPDVD-LRVIARGTPGFSGADLANLV--NEA 374
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 63/217 (29%), Positives = 109/217 (50%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLLG 69
+L+ + Y ++G +G LL GPPG GK+ L A+A +L + +E+ LG
Sbjct: 318 YLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLG 377
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+R + ++ +V ID E+ D + + R+ N ++G+ ++ TL+ L
Sbjct: 378 AARVRSLFKEARARAPCIVY-ID---EI-DAVGKKRSTN----MSGFSNTEEEQ-TLNQL 427
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG+ ++ D I++ +TN + LD AL+RPGR+D HI + T K + +L
Sbjct: 428 LVEMDGMGTT--DHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQERKEIFEQHLK 485
Query: 190 IAEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEA 222
I + + L A++TP AD+A + NEA
Sbjct: 486 ILKLTQPADFYSL-RLAELTPGFSGADIAN--ICNEA 519
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 70/253 (27%), Positives = 122/253 (48%)
Query: 23 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLG------NNDLRHI 76
Y++ G A +G L +GPPGTGK+ L A+A + + ++ LL +++R I
Sbjct: 514 YQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDI 573
Query: 77 LIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGL 136
+ VV +D EL D +++AR + AG + ++ LL +DG+
Sbjct: 574 FDKARAAAPTVVF-LD---EL-DSIAKARGGSHGD--AGGASDR----VVNQLLTEMDGM 622
Query: 137 WSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMS-HCTPSGFKMLASNYLGIAEHP- 194
+ +I TN +++DPALLRPGR+D I + P+ +L + P
Sbjct: 623 --NAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPG 680
Query: 195 LFV-EIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKEAEERA 253
L + EI K+ T + AD++ + R+ +FA+ + +E++ + N E KE + +
Sbjct: 681 LDLNEIAKI--THGFSGADLSYIVQRSA--KFAIK---DSIEAQVKINKIKEEKE-KVKT 732
Query: 254 VQAEKKVLEISEE 266
+ KV E+ EE
Sbjct: 733 EDVDMKVDEVEEE 745
Score = 125 (49.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 44/164 (26%), Positives = 78/164 (47%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L+ + ++ +G +G L+YGPPGTGK+ + A+AN F + E+ S + G ++
Sbjct: 235 LRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESE 294
Query: 73 --LRHILIATENKS--ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
LR E S I+ +++ID +D+ + G +++ +S
Sbjct: 295 SNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTN------------GEVERR----VVSQ 338
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
LL +DG+ ++I TN +DPAL R GR D +++
Sbjct: 339 LLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFDREVDI 380
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 70/253 (27%), Positives = 122/253 (48%)
Query: 23 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLG------NNDLRHI 76
Y++ G A +G L +GPPGTGK+ L A+A + + ++ LL +++R I
Sbjct: 514 YQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDI 573
Query: 77 LIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGL 136
+ VV +D EL D +++AR + AG + ++ LL +DG+
Sbjct: 574 FDKARAAAPTVVF-LD---EL-DSIAKARGGSHGD--AGGASDR----VVNQLLTEMDGM 622
Query: 137 WSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMS-HCTPSGFKMLASNYLGIAEHP- 194
+ +I TN +++DPALLRPGR+D I + P+ +L + P
Sbjct: 623 --NAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPG 680
Query: 195 LFV-EIEKLIATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKEAEERA 253
L + EI K+ T + AD++ + R+ +FA+ + +E++ + N E KE + +
Sbjct: 681 LDLNEIAKI--THGFSGADLSYIVQRSA--KFAIK---DSIEAQVKINKIKEEKE-KVKT 732
Query: 254 VQAEKKVLEISEE 266
+ KV E+ EE
Sbjct: 733 EDVDMKVDEVEEE 745
Score = 125 (49.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 44/164 (26%), Positives = 78/164 (47%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L+ + ++ +G +G L+YGPPGTGK+ + A+AN F + E+ S + G ++
Sbjct: 235 LRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESE 294
Query: 73 --LRHILIATENKS--ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
LR E S I+ +++ID +D+ + G +++ +S
Sbjct: 295 SNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTN------------GEVERR----VVSQ 338
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
LL +DG+ ++I TN +DPAL R GR D +++
Sbjct: 339 LLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFDREVDI 380
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 75/259 (28%), Positives = 126/259 (48%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYDLELSNL---LG 69
FL+ ++ ++++G +G LL G PGTGK+ L IA AN F + + + +G
Sbjct: 174 FLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVG 233
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + + + ++ ID E+ D + R R L G ++++Q TL+ L
Sbjct: 234 ASRVRDMFEQGKKNAPCIIF-ID---EI-DAVGRHRGIG---LGGGNDEREQ---TLNQL 282
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG S+ G III TN + LD ALLRPGR D + +S +G + + + ++
Sbjct: 283 LVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHIK 340
Query: 190 IAEHPLFVEIEKLI-ATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKE 248
V I + T + AD+A + NEA LI +KK S+ +
Sbjct: 341 KVPTAPDVNIRTIARGTPGFSGADLANLV--NEA------ALIAARLNKKIVTM-SDFEY 391
Query: 249 AEERAVQ-AEKKVLEISEE 266
A ++ + AE+K L ++EE
Sbjct: 392 ARDKVMMGAERKSLMMTEE 410
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 75/259 (28%), Positives = 126/259 (48%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYDLELSNL---LG 69
FL+ ++ ++++G +G LL G PGTGK+ L IA AN F + + + +G
Sbjct: 174 FLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVG 233
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + + + ++ ID E+ D + R R L G ++++Q TL+ L
Sbjct: 234 ASRVRDMFEQGKKNAPCIIF-ID---EI-DAVGRHRGIG---LGGGNDEREQ---TLNQL 282
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG S+ G III TN + LD ALLRPGR D + +S +G + + + ++
Sbjct: 283 LVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHIK 340
Query: 190 IAEHPLFVEIEKLI-ATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKE 248
V I + T + AD+A + NEA LI +KK S+ +
Sbjct: 341 KVPTAPDVNIRTIARGTPGFSGADLANLV--NEA------ALIAARLNKKIVTM-SDFEY 391
Query: 249 AEERAVQ-AEKKVLEISEE 266
A ++ + AE+K L ++EE
Sbjct: 392 ARDKVMMGAERKSLMMTEE 410
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 52/169 (30%), Positives = 82/169 (48%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLL 68
+E L++ E ++ G RG LLYGPPGTGK+ + A+AN + V + +S
Sbjct: 360 IELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFY 419
Query: 69 GNND--LRHILI-AT-ENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G + LR I AT + SI+ ++++D R A N E +K+
Sbjct: 420 GETEARLRQIFAEATLRHPSIIFIDELDALCP-----KREGAQN--------EVEKR--- 463
Query: 125 TLSGLLNFIDGLWSSCGDERIIIF-TTNHKERLDPALLRPGRMDMHINM 172
++ LL +DG+ S + ++++ TN LD AL RPGR D I +
Sbjct: 464 VVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 512
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 52/166 (31%), Positives = 86/166 (51%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LL+GPPGTGK+ L A+A++ + + S L+
Sbjct: 175 IELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 234
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID SR ++ G + + Q
Sbjct: 235 GEGARMVRELFVMAREHAPSIIFMDEIDSIGS-----SRVEGSS------GGDSEVQR-- 281
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LDPALLRPGR+D I
Sbjct: 282 TMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRIDRKI 325
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 72/257 (28%), Positives = 117/257 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVY---DLELSNL---LG 69
FL+ + + +G +G LL GPPGTGK+ L A+A Y E + +G
Sbjct: 306 FLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG 365
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R++ + + V+ ID EL D + R +P + Y +Q T++ L
Sbjct: 366 ASRIRNLFREAKGNAPCVIF-ID---EL-DSVGGKRIESP---MHPYSRQ-----TINQL 412
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G III TN E LD AL+RPGR DM + + G + YL
Sbjct: 413 LAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLK 470
Query: 190 IAEHPLFVEIEKLI-ATAKVTPADVAEQLMRNEAPEFALSGL-IEFLESKKRANDGSEAK 247
+ VE E + T + A++ E L+ A + A+ G + ++ + A D
Sbjct: 471 KIKVDSAVEAEVIARGTVGFSGAEL-ENLVNQAALKAAVDGKDMVTMKELEFAKD-KILM 528
Query: 248 EAEERAVQAEKKVLEIS 264
E R+ + +K+ EI+
Sbjct: 529 GPERRSAEIDKRNKEIT 545
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 49/161 (30%), Positives = 87/161 (54%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLLG 69
+L+ + Y ++G +G LL GPPG GK+ L A+A +L + +E+ LG
Sbjct: 300 YLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLG 359
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+R + + ++ +V ID E+ D + + R+ N ++G+ ++ TL+ L
Sbjct: 360 AARVRSLFREAQARAPCIVY-ID---EI-DAVGKKRSTN----VSGFANAEEEQ-TLNQL 409
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
L +DG+ ++ D I++ +TN + LD AL+RPGR+D HI
Sbjct: 410 LVEMDGMGTT--DHVIVLASTNRADVLDNALMRPGRLDRHI 448
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 55/159 (34%), Positives = 85/159 (53%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI---AAMAN--YLKFDVYDLELSNLLGNN 71
+Q+ + +R++G +G L++GPPGTGK+ L AA +N +LK L + +G+
Sbjct: 205 MQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQL-VQMFIGDG 263
Query: 72 D--LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+R + KS ++ ID EL D + R D AG ++ T+ L
Sbjct: 264 AKLVRDAFALAKEKSPAIIF-ID---EL-DAIGTKRF---DSEKAG---DREVQRTMLEL 312
Query: 130 LNFIDGLWSSCGDERI-IIFTTNHKERLDPALLRPGRMD 167
LN +DG +SS D+R+ +I TN + LDPALLR GR+D
Sbjct: 313 LNQLDG-FSS--DDRVKVIAATNRVDTLDPALLRSGRLD 348
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 145 (56.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 70/247 (28%), Positives = 114/247 (46%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL----GNND 72
++ + + + G RG L YGPPG GK+ L A+AN + + ++ LL G ++
Sbjct: 494 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 553
Query: 73 --LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
+R I + + V+ D EL D +++AR N AG + ++ +L
Sbjct: 554 ANVRDIFDKARSAAPCVLF-FD---EL-DSIAKARGGNVGD--AGGAADR----VINQIL 602
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGI 190
+DG+ + II TN + +DPA+LRPGR+D I + P A +
Sbjct: 603 TEMDGMGAK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIP--LPDDKSREAILKANL 658
Query: 191 AEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEAPEFALSGLIE--FLESKKRANDGS 244
+ PL E++ L AKVT AD+ E R A + A+ IE K+RA + +
Sbjct: 659 RKSPLAKEVD-LTYIAKVTQGFSGADLTEICQR--ACKLAIRQAIEAEIRREKERAENQN 715
Query: 245 EAKEAEE 251
A + +E
Sbjct: 716 SAMDMDE 722
Score = 133 (51.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 67/251 (26%), Positives = 115/251 (45%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L+ ++ +G RG L+YGPPGTGK+ + A+AN F + E+ S L G ++
Sbjct: 221 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESE 280
Query: 73 --LRHILIATENKS--ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
LR E S I+ +++ID +D+ G +++ +S
Sbjct: 281 SNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTH------------GEVERR----IVSQ 324
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNY 187
LL +DG+ S I++ TN +DPAL R GR D I++ +G ++L +
Sbjct: 325 LLTLMDGMKKS--SHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHT 382
Query: 188 LGIAEHPLFVEIEKLIATAKV-TPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEA 246
+ H V++E++ A + AD+A + +EA AL + E ++ +D +A
Sbjct: 383 KNMKLHD-DVDLEQIAAESHGHVGADLAS--LCSEA---ALQQIREKMDLIDLEDDKIDA 436
Query: 247 KEAEERAVQAE 257
+ AV E
Sbjct: 437 EVLASLAVTME 447
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 141 (54.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G + +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 195 IELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 254
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G+ +R + + A E+ SI+ +++ID + R I G +
Sbjct: 255 GEGSRMVRELFVMAREHAPSIIFMDEIDS-------IGSQR-------IEGEHGDSEVQR 300
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG S+ + +I TN + LD ALLRPGR+D I
Sbjct: 301 TMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRIDRKI 344
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 141 (54.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G + +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 195 IELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 254
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G+ +R + + A E+ SI+ +++ID + R I G +
Sbjct: 255 GEGSRMVRELFVMAREHAPSIIFMDEIDS-------IGSQR-------IEGEHGDSEVQR 300
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG S+ + +I TN + LD ALLRPGR+D I
Sbjct: 301 TMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRIDRKI 344
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 144 (55.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 69/246 (28%), Positives = 108/246 (43%)
Query: 23 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-------YLKFDVYDLELSNLLGNNDLRH 75
Y +G +G LL G PGTGK+ L A+A Y +D + + G+ +R
Sbjct: 325 YNSIGAKLPKGVLLSGEPGTGKTLLARAIAGEAGVSFLYTTGSSFDEKYVGV-GSRRVRE 383
Query: 76 ILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDG 135
+ A K ++ ID E+ D + ++R ++ TL LL +DG
Sbjct: 384 LFNAAREKQPCIIF-ID---EI-DAVGKSR------------NTAHHNETLLQLLTEMDG 426
Query: 136 LWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAEHPL 195
+ + +II TN LDPALLRPGR D HI++ G + +YL +H +
Sbjct: 427 FEGN--SQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEIIDHYLKKVKHTV 484
Query: 196 FVEIEKLI-ATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKK--RANDGSEAKEAEER 252
V+ + + AT T AD++ + N A A+ E + K+ A D A
Sbjct: 485 EVKADTIARATPGFTGADLSNLI--NTAAIKAVQNGKETISIKQIDDARDDILMGRARLN 542
Query: 253 AVQAEK 258
AV +E+
Sbjct: 543 AVMSEE 548
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 144 (55.7 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 73/263 (27%), Positives = 117/263 (44%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ + Y+ +G +G +L GPPGTGK+ L A A + S L G
Sbjct: 311 FLKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVG 370
Query: 70 NNDLRHIL-IATENKS-ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+R + +A +N IL +++ID + R R + G+ +Q+ TL+
Sbjct: 371 PARVRDMFSMARKNSPCILFIDEIDA-------VGRKRGGKGG--MGGHSEQEN---TLN 418
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG +++ I+I TN + LD ALLRPGR D I + G + +
Sbjct: 419 QLLVEMDG-FTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGRASIFRVH 477
Query: 188 LGIAEHPLFVEIEKLIATAKV---TPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGS 244
LG PL ++K + + K+ TP + N E AL I ++ ++
Sbjct: 478 LG----PLRTSLDKTVLSRKLAAHTPGFSGADIS-NVCNEAAL---IAARDANHEISN-K 528
Query: 245 EAKEAEERAVQA-EKKVLEISEE 266
++A ER V EKK + +E
Sbjct: 529 HFEQAIERVVAGMEKKTQVLQKE 551
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 142 (55.0 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 47/158 (29%), Positives = 78/158 (49%)
Query: 24 RRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGNNDLRHILIATENK 83
R +G W RG LLYGPPGTGK+SL+ A+ + D + + LS + + H A E++
Sbjct: 49 RTLGLKWPRGLLLYGPPGTGKTSLVRAVVQ--ECDAHLIVLSP----HSV-HRAHAGESE 101
Query: 84 SILVVEDIDCCIE-LQDRLSRARAANPDFLIAGYEQQKQYHITL-SGLLNFIDGLWSSCG 141
+L + + D+ S D L + +++ + + S L +D S
Sbjct: 102 KVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMDSNKPSSS 161
Query: 142 DERIIIF-TTNHKERLDPALLRPGRMDMHINMSHCTPS 178
R+++ +TN + +DPAL R GR D + +S TP+
Sbjct: 162 APRVVVVASTNRVDAIDPALRRAGRFDALVEVS--TPN 197
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 140 (54.3 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 52/166 (31%), Positives = 85/166 (51%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + + S L+
Sbjct: 191 IELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFI 250
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID R+ +R + E Q+
Sbjct: 251 GEGARMVRELFVMAREHAPSIIFMDEIDSIGS--SRVEGSRGGDS-------EVQR---- 297
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 298 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 341
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 63/222 (28%), Positives = 103/222 (46%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA---NYLKFDVYDLELSNL---LG 69
FL+ Y ++G RG +L GPPGTGK+ L A A N V E + +G
Sbjct: 306 FLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVG 365
Query: 70 NNDLRHILIATENK--SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+ +R + + SI+ +++ID + + R + G +++ TL+
Sbjct: 366 ASRVRDLFTQARSMAPSIIFIDEIDA-------IGKERGKGG--ALGGANDERE--ATLN 414
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG +S D+ +++ TN + LD AL+RPGR D HI + +G + + +
Sbjct: 415 QLLVEMDGFTTS--DQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVH 472
Query: 188 LG-IAEHPLFVE-IEKLIAT-AKVTP----ADVAEQLMRNEA 222
L + PL + + L A +TP AD+A NEA
Sbjct: 473 LKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANAC--NEA 512
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 141 (54.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 57/157 (36%), Positives = 79/157 (50%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF-DVYDLELSNL-LGNND 72
L K+ + G + G LLYGPPGTGK+ L A+A L F V EL N+ +G ++
Sbjct: 678 LLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESE 736
Query: 73 --LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
+R I + V+ D EL D L+ AR A+ D +G + +S +L
Sbjct: 737 KNVRDIFEKARSARPCVIF-FD---EL-DSLAPARGASGD---SGGVMDR----VVSQML 784
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMD 167
IDGL S + II +N + +DPALLRPGR D
Sbjct: 785 AEIDGL-SDSSQDLFIIGASNRPDLIDPALLRPGRFD 820
Score = 44 (20.5 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 16/86 (18%), Positives = 39/86 (45%)
Query: 151 NHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAEHPLFVEIEKLIATAKVTP 210
+++ER+ AL R ++ +++ S K S + G + L + A KV+
Sbjct: 832 SYRERVLKALTRKFKLSEDVSLY----SVAKKCPSTFTGADMYALCADAWFQAAKRKVSK 887
Query: 211 ADVAEQLMRNEAPEFALSGLIEFLES 236
+D + + P+ + ++F+++
Sbjct: 888 SDSGDMPTEEDDPDSVVVEYVDFIKA 913
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 143 (55.4 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 65/229 (28%), Positives = 110/229 (48%)
Query: 15 RFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLL 68
+FLQ Y ++G RG +L GPPGTGK+ L A A +L + +E+ +
Sbjct: 304 KFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGV 363
Query: 69 GNNDLRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITL 126
G + +R + A E +I+ V++ID + + R + G ++++ TL
Sbjct: 364 GASRVRDLFKTAREMAPAIIFVDEIDA-------IGKERGNGR---MGGNDEREN---TL 410
Query: 127 SGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASN 186
+ LL +DG ++ D +++ TN + LD ALLRPGR D HI++ G K +
Sbjct: 411 NQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKV 468
Query: 187 YLGIAEHPLFVEIEKLIATAKVTPADVAE-QLMRNEAPEFALSGLIEFL 234
+L + +I+ AK D ++ Q ++NE E L+G + L
Sbjct: 469 HLNKLKLKSVQDID-----AKQKDVDFSKYQQLKNEEIE-KLAGRLAAL 511
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 143 (55.4 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 65/229 (28%), Positives = 110/229 (48%)
Query: 15 RFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDVYD-LELSNLL 68
+FLQ Y ++G RG +L GPPGTGK+ L A A +L + +E+ +
Sbjct: 304 KFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGV 363
Query: 69 GNNDLRHIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITL 126
G + +R + A E +I+ V++ID + + R + G ++++ TL
Sbjct: 364 GASRVRDLFKTAREMAPAIIFVDEIDA-------IGKERGNGR---MGGNDEREN---TL 410
Query: 127 SGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASN 186
+ LL +DG ++ D +++ TN + LD ALLRPGR D HI++ G K +
Sbjct: 411 NQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKV 468
Query: 187 YLGIAEHPLFVEIEKLIATAKVTPADVAE-QLMRNEAPEFALSGLIEFL 234
+L + +I+ AK D ++ Q ++NE E L+G + L
Sbjct: 469 HLNKLKLKSVQDID-----AKQKDVDFSKYQQLKNEEIE-KLAGRLAAL 511
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 143 (55.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 73/232 (31%), Positives = 105/232 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA---NYLKFDVYDLE-LSNLLGNN 71
FL+ + Y+ +G +G +L GPPGTGK+ L A A N V E L +G
Sbjct: 327 FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVG 386
Query: 72 DLR-HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
R L A K+ + ID E+ D + R R +F G +Q+ TL+ LL
Sbjct: 387 PARVRDLFALARKNAPCILFID---EI-DAVGRKRGRG-NF--GGQSEQEN---TLNQLL 436
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGI 190
+DG ++ +I+ TN + LDPAL+RPGR D I + G + +L
Sbjct: 437 VEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRP 494
Query: 191 AEHPLFVEIEKLIAT-AKVTP----ADVAEQLMRNEAPEFALSGLIEFLESK 237
+ +E EKL A +TP ADVA + NEA A L + + K
Sbjct: 495 LKLDSTLEKEKLARKLASLTPGFSGADVAN--VCNEAALIAARHLSDSINQK 544
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 143 (55.4 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 73/232 (31%), Positives = 105/232 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA---NYLKFDVYDLE-LSNLLGNN 71
FL+ + Y+ +G +G +L GPPGTGK+ L A A N V E L +G
Sbjct: 327 FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVG 386
Query: 72 DLR-HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
R L A K+ + ID E+ D + R R +F G +Q+ TL+ LL
Sbjct: 387 PARVRDLFALARKNAPCILFID---EI-DAVGRKRGRG-NF--GGQSEQEN---TLNQLL 436
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGI 190
+DG ++ +I+ TN + LDPAL+RPGR D I + G + +L
Sbjct: 437 VEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRP 494
Query: 191 AEHPLFVEIEKLIAT-AKVTP----ADVAEQLMRNEAPEFALSGLIEFLESK 237
+ +E EKL A +TP ADVA + NEA A L + + K
Sbjct: 495 LKLDSALEKEKLARKLASLTPGFSGADVAN--VCNEAALIAARHLSDSINQK 544
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 70/247 (28%), Positives = 114/247 (46%)
Query: 20 KEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLLGNND--L 73
KE + + G + +G +LYGPPG K++L+ A+A+ K L S LG+++ +
Sbjct: 593 KESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGDSEQTI 652
Query: 74 RHILIATENK--SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLN 131
R I SIL ++ID + R + N +G Q + LS LN
Sbjct: 653 RDIFKKARQTTPSILFFDEIDAIVS-----KRNLSDNS----SGDNAQSR---VLSTFLN 700
Query: 132 FIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTP-SGFKMLA--SNYL 188
+DG+ G I+I TN + +D ALLRPGR D + + S K+L + +
Sbjct: 701 EMDGVEQLNGV--IVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKILKIKTKSI 758
Query: 189 GIAEHPLFVEIEKLIATAKVTPADVAEQLMRNEAPEFA----LSGLIE---FLESKKRAN 241
++++ +EI L T + AD+ E L R + + L+G +E FL + N
Sbjct: 759 PLSDNVNLIEISNL--TNGFSGADL-ENLCREASFQSLRRDLLNGFVEMYDFLNCLSKIN 815
Query: 242 DGSEAKE 248
+ S+ E
Sbjct: 816 NQSKNLE 822
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 41/148 (27%), Positives = 71/148 (47%)
Query: 32 RGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLGN------NDLRHILIATENKSI 85
+G LL GPPGTGK+ L+ + + ++ ++ + + G+ +LR+I +KSI
Sbjct: 322 KGILLKGPPGTGKTHLVRTVCDAYDIEMISIDCAKISGSYIGETEENLRNIFQEASDKSI 381
Query: 86 LVVED-IDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSCGDER 144
I I+ D + R+ + Q + + + L +DG+ + G+
Sbjct: 382 AKSNSPIVVFIDEIDTICPPRSKST---------QNESRV-VGQFLTLLDGIGARKGN-L 430
Query: 145 IIIFTTNHKERLDPALLRPGRMDMHINM 172
III TN ++D AL RPGR+D I +
Sbjct: 431 IIIAATNRPNQIDNALRRPGRLDREIEI 458
Score = 41 (19.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/52 (21%), Positives = 23/52 (44%)
Query: 203 IATAKVTPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKEAEERAV 254
+ ++ T D+ ++ R P I+ + SK+ +D S A+ R +
Sbjct: 645 LGDSEQTIRDIFKKA-RQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVL 695
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 139 (54.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 59/202 (29%), Positives = 94/202 (46%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND--LR 74
E Y+++G RG L+YGPPG GK+ L A+A++ V E + LG +R
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 75 HIL-IATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ +A EN +I+ +++ID R A G +++ Q I L LLN
Sbjct: 249 DVFRLAKENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ-RILLE-LLNQ 295
Query: 133 IDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAE 192
+DG + + +I TN + LDPALL PGR+D I +++ S
Sbjct: 296 MDGFDQNVNVK--VIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQKRLVFSTITSKMN 353
Query: 193 HPLFVEIEKLIATA-KVTPADV 213
V++E +A K++ AD+
Sbjct: 354 LSEEVDLEDYVARPDKISGADI 375
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 141 (54.7 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 65/259 (25%), Positives = 113/259 (43%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLLGNND 72
++ E Y +G RG LL+GPPG GK+ L A+A L + + +S + G ++
Sbjct: 178 MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 237
Query: 73 --LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
LR + E V + C I + D + A P +A + +++ ++ LL
Sbjct: 238 QKLRELF---EQ----AVSNAPCIIFI-DEID---AITPKREVASKDMERRI---VAQLL 283
Query: 131 NFIDGLWSSCGDERIIIF-TTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
+D L + R+++ TN + LDPAL R GR D I + + + +
Sbjct: 284 TCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCR 343
Query: 190 IAEHPLFVEIEKLIATAKVTPADVAEQLMR--NEAPEFALSGLIEFLESKKRANDGSEAK 247
P + L A +TP V LM EA A++ ++ L+ +++ N E +
Sbjct: 344 KLRLPQAFDFCHL---AHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNP--EME 398
Query: 248 EAEERAVQAEKKVLEISEE 266
+ + VQ E+ E + E
Sbjct: 399 DLPSKGVQEERLGTEPTSE 417
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 142 (55.0 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 71/248 (28%), Positives = 110/248 (44%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVY---DLELSNL---LG 69
FL+ + + +G +G LL GPPGTGK+ L A+A Y E + +G
Sbjct: 299 FLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG 358
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R++ E K+ + C I + D L +F + Y +Q T+ L
Sbjct: 359 ASRIRNLF--REAKA-----NAPCVIFI-DELDSVGGKRIEFPMHPYSRQ-----TIIQL 405
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G III TN E LD AL+RPGR DM + + G + YL
Sbjct: 406 LAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 463
Query: 190 IAEHPLFVEIEKLIATAKV--TPADVAEQLMRNEAPEFALSG--LIEFLE---SKKRAND 242
+ V+ E +IA V + A++ E L+ A + A+ G ++ E SK +
Sbjct: 464 KIKFDKSVDPE-IIARGTVGFSGAEL-ENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 521
Query: 243 GSEAKEAE 250
G E + E
Sbjct: 522 GPERRSVE 529
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 139 (54.0 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 48/158 (30%), Positives = 72/158 (45%)
Query: 20 KEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDL---ELSNLLGNNDLRHI 76
KE + ++G +G L++GPPGTGK+ L A A+ L +L + + + +
Sbjct: 209 KEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMV 268
Query: 77 LIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGL 136
A L E I + D L D ++G ++ T+ LLN +DG
Sbjct: 269 RDAFN----LAKEKAPAIIFI-DELDAIGTKRFDSELSG---DREVQRTMLELLNQLDGF 320
Query: 137 WSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSH 174
S D +I TN + LDPALLR GR+D I + H
Sbjct: 321 --STDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPH 356
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 139 (54.0 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 48/158 (30%), Positives = 72/158 (45%)
Query: 20 KEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDL---ELSNLLGNNDLRHI 76
KE + ++G +G L++GPPGTGK+ L A A+ L +L + + + +
Sbjct: 209 KEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMV 268
Query: 77 LIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGL 136
A L E I + D L D ++G ++ T+ LLN +DG
Sbjct: 269 RDAFN----LAKEKAPAIIFI-DELDAIGTKRFDSELSG---DREVQRTMLELLNQLDGF 320
Query: 137 WSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSH 174
S D +I TN + LDPALLR GR+D I + H
Sbjct: 321 --STDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPH 356
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 139 (54.0 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 52/166 (31%), Positives = 83/166 (50%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 160 IELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 219
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + RL + E Q+
Sbjct: 220 GEGARMVRELFVMAREHAPSIIFMDEID---SIGSRLEGGSGGDS-------EVQR---- 265
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 266 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 309
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 142 (55.0 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 73/232 (31%), Positives = 105/232 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA---NYLKFDVYDLE-LSNLLGNN 71
FL+ + Y+ +G +G +L GPPGTGK+ L A A N V E L +G
Sbjct: 326 FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVG 385
Query: 72 DLR-HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
R L A K+ + ID E+ D + R R +F G +Q+ TL+ LL
Sbjct: 386 PARVRDLFALARKNAPCILFID---EI-DAVGRKRGRG-NF--GGQSEQEN---TLNQLL 435
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGI 190
+DG ++ +I+ TN + LDPALLRPGR D I + G + +L
Sbjct: 436 VEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 493
Query: 191 AEHPLFVEIEKLIAT-AKVTP----ADVAEQLMRNEAPEFALSGLIEFLESK 237
+ +E +KL A +TP ADVA + NEA A L + + K
Sbjct: 494 LKLDSTLEKDKLARKLASLTPGFSGADVAN--VCNEAALIAARHLSDSINQK 543
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 142 (55.0 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 71/239 (29%), Positives = 109/239 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
FL+ + Y+ +G +G +L GPPGTGK+ L A A + S L G
Sbjct: 321 FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVG 380
Query: 70 NNDLRHILI-ATENKS-ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLS 127
+R + + A +N IL +++ID + R R +F G +Q+ TL+
Sbjct: 381 PARVRDLFVLARKNAPCILFIDEIDA-------VGRKRGRG-NF--GGQSEQEN---TLN 427
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNY 187
LL +DG + +++ TN + LDPAL+RPGR D I + P K AS +
Sbjct: 428 QLLVEMDGF--NTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIG---PPDIKGRASIF 482
Query: 188 LGIAEHPLFVEIE---KLIAT--AKVTP----ADVAEQLMRNEAPEFALSGLIEFLESK 237
+ PL +E E + +A A +TP AD+A + NEA A L + + K
Sbjct: 483 K-VHLRPLKLEAELDKEALARKMAALTPGFSGADIAN--VCNEAALIAARHLSDAINQK 538
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 141 (54.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 68/247 (27%), Positives = 120/247 (48%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL------G 69
+L+ ++++G G LL G PGTGK+ L A+A K + + S+ + G
Sbjct: 172 YLREPSRFQKLGGRIPSGILLVGQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVG 231
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R + + + ++ ID E+ D + R R A + G+++++Q TL+ +
Sbjct: 232 ASRVRDMFEQAKKAAPCIIF-ID---EI-DAVGRQRGAG---MGGGHDEREQ---TLNQM 280
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G I+I TN + LDPALLRPGR D + + G + + ++
Sbjct: 281 LVEMDGFEGNEGV--IVIAATNRPDVLDPALLRPGRFDRQVTVGLPDIRGREQILKVHM- 337
Query: 190 IAEHPLFVEIE-KLIA--TAKVTPADVAEQLMRNEAPEFA------LSGLIEFLESKKRA 240
+ PL +++ ++IA T + AD+A + NEA A + + EF +K +
Sbjct: 338 -RKVPLGDDVKAEVIARGTPGFSGADLANLV--NEAALCAARTARRVVSMKEFDAAKDKI 394
Query: 241 NDGSEAK 247
GSE K
Sbjct: 395 MMGSERK 401
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 142 (55.0 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 73/232 (31%), Positives = 105/232 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA---NYLKFDVYDLE-LSNLLGNN 71
FL+ + Y+ +G +G +L GPPGTGK+ L A A N V E L +G
Sbjct: 325 FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVG 384
Query: 72 DLR-HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
R L A K+ + ID E+ D + R R +F G +Q+ TL+ LL
Sbjct: 385 PARVRDLFALARKNAPCILFID---EI-DAVGRKRGRG-NF--GGQSEQEN---TLNQLL 434
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGI 190
+DG ++ +I+ TN + LDPALLRPGR D I + G + +L
Sbjct: 435 VEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 492
Query: 191 AEHPLFVEIEKLIAT-AKVTP----ADVAEQLMRNEAPEFALSGLIEFLESK 237
+ +E +KL A +TP ADVA + NEA A L + + K
Sbjct: 493 LKLDSALEKDKLARKLASLTPGFSGADVAN--VCNEAALIAARHLSDAINEK 542
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 142 (55.0 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 73/232 (31%), Positives = 105/232 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA---NYLKFDVYDLE-LSNLLGNN 71
FL+ + Y+ +G +G +L GPPGTGK+ L A A N V E L +G
Sbjct: 325 FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVG 384
Query: 72 DLR-HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
R L A K+ + ID E+ D + R R +F G +Q+ TL+ LL
Sbjct: 385 PARVRDLFALARKNAPCILFID---EI-DAVGRKRGRG-NF--GGQSEQEN---TLNQLL 434
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGI 190
+DG ++ +I+ TN + LDPALLRPGR D I + G + +L
Sbjct: 435 VEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRP 492
Query: 191 AEHPLFVEIEKLIAT-AKVTP----ADVAEQLMRNEAPEFALSGLIEFLESK 237
+ +E +KL A +TP ADVA + NEA A L + + K
Sbjct: 493 LKLDSALEKDKLARKLASLTPGFSGADVAN--VCNEAALIAARHLSDAINEK 542
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 138 (53.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 165 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 224
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R L G +
Sbjct: 225 GEGARMVRELFVMAREHAPSIIFMDEIDS-------IGSSR------LEGGSGGDSEVQR 271
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 272 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 315
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 138 (53.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 165 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 224
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R L G +
Sbjct: 225 GEGARMVRELFVMAREHAPSIIFMDEIDS-------IGSSR------LEGGSGGDSEVQR 271
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 272 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 315
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 138 (53.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 165 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 224
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R L G +
Sbjct: 225 GEGARMVRELFVMAREHAPSIIFMDEIDS-------IGSSR------LEGGSGGDSEVQR 271
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 272 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 315
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 138 (53.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 165 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 224
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R L G +
Sbjct: 225 GEGARMVRELFVMAREHAPSIIFMDEIDS-------IGSSR------LEGGSGGDSEVQR 271
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 272 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 315
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 138 (53.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 165 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 224
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R L G +
Sbjct: 225 GEGARMVRELFVMAREHAPSIIFMDEIDS-------IGSSR------LEGGSGGDSEVQR 271
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 272 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 315
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 138 (53.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 165 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 224
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R L G +
Sbjct: 225 GEGARMVRELFVMAREHAPSIIFMDEIDS-------IGSSR------LEGGSGGDSEVQR 271
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 272 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 315
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 138 (53.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 165 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 224
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R L G +
Sbjct: 225 GEGARMVRELFVMAREHAPSIIFMDEIDS-------IGSSR------LEGGSGGDSEVQR 271
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 272 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 315
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 138 (53.6 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 171 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 230
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R L G +
Sbjct: 231 GEGARMVRELFVMAREHAPSIIFMDEIDS-------IGSSR------LEGGSGGDSEVQR 277
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 278 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 321
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 138 (53.6 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 173 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 232
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R L G +
Sbjct: 233 GEGARMVRELFVMAREHAPSIIFMDEIDS-------IGSSR------LEGGSGGDSEVQR 279
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 280 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 323
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 138 (53.6 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL---- 68
+E ++ E + +G A +G LLYGPPGTGK+ L A+A++ + S L+
Sbjct: 173 IELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 232
Query: 69 --GNNDLRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHI 124
G +R + + A E+ SI+ +++ID + +R L G +
Sbjct: 233 GEGARMVRELFVMAREHAPSIIFMDEIDS-------IGSSR------LEGGSGGDSEVQR 279
Query: 125 TLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
T+ LLN +DG ++ + +I TN + LD ALLRPGR+D I
Sbjct: 280 TMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 323
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 141 (54.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 72/248 (29%), Positives = 113/248 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVY---DLELSNL---LG 69
FL+ + + +G +G LL GPPGTGK+ L A+A Y E + +G
Sbjct: 299 FLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG 358
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R++ + + V+ ID EL D + R +P + Y +Q T++ L
Sbjct: 359 ASRIRNLFREAKANAPCVIF-ID---EL-DSVGGKRIESP---MHPYSRQ-----TINQL 405
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G III TN E LD AL+RPGR DM + + G + YL
Sbjct: 406 LAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 463
Query: 190 IAEHPLFVEIEKLIATAKV--TPADVAEQLMRNEAPEFALSG--LIEFLE---SKKRAND 242
+ V+ E +IA V + A++ E L+ A + A+ G ++ E SK +
Sbjct: 464 KIKFDQSVDPE-IIARGTVGFSGAEL-ENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 521
Query: 243 GSEAKEAE 250
G E + E
Sbjct: 522 GPERRSVE 529
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 141 (54.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 72/248 (29%), Positives = 113/248 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVY---DLELSNL---LG 69
FL+ + + +G +G LL GPPGTGK+ L A+A Y E + +G
Sbjct: 299 FLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG 358
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R++ + + V+ ID EL D + R +P + Y +Q T++ L
Sbjct: 359 ASRIRNLFREAKANAPCVIF-ID---EL-DSVGGKRIESP---MHPYSRQ-----TINQL 405
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G III TN E LD AL+RPGR DM + + G + YL
Sbjct: 406 LAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 463
Query: 190 IAEHPLFVEIEKLIATAKV--TPADVAEQLMRNEAPEFALSG--LIEFLE---SKKRAND 242
+ V+ E +IA V + A++ E L+ A + A+ G ++ E SK +
Sbjct: 464 KIKFDKSVDPE-IIARGTVGFSGAEL-ENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 521
Query: 243 GSEAKEAE 250
G E + E
Sbjct: 522 GPERRSVE 529
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 141 (54.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 72/248 (29%), Positives = 113/248 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVY---DLELSNL---LG 69
FL+ + + +G +G LL GPPGTGK+ L A+A Y E + +G
Sbjct: 299 FLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG 358
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R++ + + V+ ID EL D + R +P + Y +Q T++ L
Sbjct: 359 ASRIRNLFREAKANAPCVIF-ID---EL-DSVGGKRIESP---MHPYSRQ-----TINQL 405
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G III TN E LD AL+RPGR DM + + G + YL
Sbjct: 406 LAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 463
Query: 190 IAEHPLFVEIEKLIATAKV--TPADVAEQLMRNEAPEFALSG--LIEFLE---SKKRAND 242
+ V+ E +IA V + A++ E L+ A + A+ G ++ E SK +
Sbjct: 464 KIKFDKSVDPE-IIARGTVGFSGAEL-ENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 521
Query: 243 GSEAKEAE 250
G E + E
Sbjct: 522 GPERRSVE 529
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 141 (54.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 72/248 (29%), Positives = 113/248 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVY---DLELSNL---LG 69
FL+ + + +G +G LL GPPGTGK+ L A+A Y E + +G
Sbjct: 299 FLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG 358
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R++ + + V+ ID EL D + R +P + Y +Q T++ L
Sbjct: 359 ASRIRNLFREAKANAPCVIF-ID---EL-DSVGGKRIESP---MHPYSRQ-----TINQL 405
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G III TN E LD AL+RPGR DM + + G + YL
Sbjct: 406 LAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 463
Query: 190 IAEHPLFVEIEKLIATAKV--TPADVAEQLMRNEAPEFALSG--LIEFLE---SKKRAND 242
+ V+ E +IA V + A++ E L+ A + A+ G ++ E SK +
Sbjct: 464 KIKFDQSVDPE-IIARGTVGFSGAEL-ENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 521
Query: 243 GSEAKEAE 250
G E + E
Sbjct: 522 GPERRSVE 529
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 141 (54.7 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 65/259 (25%), Positives = 113/259 (43%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLLGNND 72
++ E Y +G RG LL+GPPG GK+ L A+A L + + +S + G ++
Sbjct: 167 MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 226
Query: 73 --LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
LR + E V + C I + D + A P +A + +++ ++ LL
Sbjct: 227 QKLRELF---EQ----AVSNAPCIIFI-DEID---AITPKREVASKDMERRI---VAQLL 272
Query: 131 NFIDGLWSSCGDERIIIF-TTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
+D L + R+++ TN + LDPAL R GR D I + + + +
Sbjct: 273 TCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCR 332
Query: 190 IAEHPLFVEIEKLIATAKVTPADVAEQLMR--NEAPEFALSGLIEFLESKKRANDGSEAK 247
P + L A +TP V LM EA A++ ++ L+ +++ N E +
Sbjct: 333 KLRLPQAFDFCHL---AHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNP--EME 387
Query: 248 EAEERAVQAEKKVLEISEE 266
+ + VQ E+ E + E
Sbjct: 388 DLPSKGVQEERLGTEPTSE 406
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 68/250 (27%), Positives = 115/250 (46%)
Query: 23 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF-DVYDLELSNL-LGNND--LRHI 76
++ +G G LL GPPG GK+ L A+AN L F V EL N+ +G ++ +R +
Sbjct: 490 FKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQV 549
Query: 77 LIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGL 136
+N + V+ D E+ D L R+ E + ++ LL +DGL
Sbjct: 550 FQRAKNSAPCVIF-FD---EV-DALCPRRSDR--------ETGASVRV-VNQLLTEMDGL 595
Query: 137 WSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNYLGIAEHPL 195
+ I+ TN + +DPA+LRPGR+D + + P+ +L + + PL
Sbjct: 596 --EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPL 653
Query: 196 F--VEIEKLIATAKV---TPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKEAE 250
V +E + + T AD++ L+R E ++ L + + +K N+ E K +
Sbjct: 654 DADVNLEAIAGDLRCDCYTGADLSA-LVR----EASICALRQEMARQKSGNEKGELKVSH 708
Query: 251 ERAVQAEKKV 260
+ +A KKV
Sbjct: 709 KHFEEAFKKV 718
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 141 (54.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 72/248 (29%), Positives = 113/248 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVY---DLELSNL---LG 69
FL+ + + +G +G LL GPPGTGK+ L A+A Y E + +G
Sbjct: 333 FLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG 392
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R++ + + V+ ID EL D + R +P + Y +Q T++ L
Sbjct: 393 ASRIRNLFREAKANAPCVIF-ID---EL-DSVGGKRIESP---MHPYSRQ-----TINQL 439
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G III TN E LD AL+RPGR DM + + G + YL
Sbjct: 440 LAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 497
Query: 190 IAEHPLFVEIEKLIATAKV--TPADVAEQLMRNEAPEFALSG--LIEFLE---SKKRAND 242
+ V+ E +IA V + A++ E L+ A + A+ G ++ E SK +
Sbjct: 498 KIKFDQSVDPE-IIARGTVGFSGAEL-ENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 555
Query: 243 GSEAKEAE 250
G E + E
Sbjct: 556 GPERRSVE 563
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 141 (54.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 72/248 (29%), Positives = 113/248 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVY---DLELSNL---LG 69
FL+ + + +G +G LL GPPGTGK+ L A+A Y E + +G
Sbjct: 352 FLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG 411
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R++ + + V+ ID EL D + R +P + Y +Q T++ L
Sbjct: 412 ASRIRNLFREAKANAPCVIF-ID---EL-DSVGGKRIESP---MHPYSRQ-----TINQL 458
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G III TN E LD AL+RPGR DM + + G + YL
Sbjct: 459 LAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 516
Query: 190 IAEHPLFVEIEKLIATAKV--TPADVAEQLMRNEAPEFALSG--LIEFLE---SKKRAND 242
+ V+ E +IA V + A++ E L+ A + A+ G ++ E SK +
Sbjct: 517 KIKFDQSVDPE-IIARGTVGFSGAEL-ENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 574
Query: 243 GSEAKEAE 250
G E + E
Sbjct: 575 GPERRSVE 582
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 141 (54.7 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 72/248 (29%), Positives = 113/248 (45%)
Query: 16 FLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVY---DLELSNL---LG 69
FL+ + + +G +G LL GPPGTGK+ L A+A Y E + +G
Sbjct: 357 FLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG 416
Query: 70 NNDLRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+ +R++ + + V+ ID EL D + R +P + Y +Q T++ L
Sbjct: 417 ASRIRNLFREAKANAPCVIF-ID---EL-DSVGGKRIESP---MHPYSRQ-----TINQL 463
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DG + G III TN E LD AL+RPGR DM + + G + YL
Sbjct: 464 LAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLN 521
Query: 190 IAEHPLFVEIEKLIATAKV--TPADVAEQLMRNEAPEFALSG--LIEFLE---SKKRAND 242
+ V+ E +IA V + A++ E L+ A + A+ G ++ E SK +
Sbjct: 522 KIKFDQSVDPE-IIARGTVGFSGAEL-ENLVNQAALKAAVDGKEMVTMKELEFSKDKILM 579
Query: 243 GSEAKEAE 250
G E + E
Sbjct: 580 GPERRSVE 587
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 141 (54.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 71/252 (28%), Positives = 114/252 (45%)
Query: 21 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLLGNND--LR 74
E + R G +G L +GPPGTGK+ L A+AN + ++ LS G ++ +R
Sbjct: 521 EKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVR 580
Query: 75 HILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFID 134
I + VV +D EL D +++AR A+ G Q LL +D
Sbjct: 581 DIFDKARAAAPCVVF-LD---EL-DSIAKARGASAGDSGGGDRVVNQ-------LLTEMD 628
Query: 135 GLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNYLGIAEH 193
G+ S +I TN +++DPAL+RPGR+D I + F +L + +
Sbjct: 629 GVNSK--KNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQ---LRHT 683
Query: 194 PLFVEIEKLIATAKVTPADVAEQL--MRNEAPEFALSGLIEFLESKKRANDGSEAKEAEE 251
P+ +++ L A AK T L + A + A+ IE E KR N+ EA A++
Sbjct: 684 PVAEDVD-LRAVAKATHGFSGADLEFVVQRAVKLAIKDSIE--EDIKRENETGEAP-ADD 739
Query: 252 RAVQAEKKVLEI 263
+ + V ++
Sbjct: 740 VVMDEDASVSQV 751
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 45/171 (26%), Positives = 81/171 (47%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L+ + ++ +G RG L+YGPPGTGK+ + A+AN F + E+ S + G ++
Sbjct: 244 LRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESE 303
Query: 73 --LRHILIATENKS--ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
LR E S I+ +++ID +++ + G +++ +S
Sbjct: 304 SNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTN------------GEVERR----VVSQ 347
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG 179
LL +DG+ +++ TN +DPAL R GR D +++ P+G
Sbjct: 348 LLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTG 396
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 141 (54.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 71/263 (26%), Positives = 122/263 (46%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLL----GNND 72
++ E + + G + +G L YGPPG GK+ L A+AN + + ++ LL G ++
Sbjct: 501 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 560
Query: 73 --LRHILIATENKS--ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R I + +L +++D I Q R + AG + L+
Sbjct: 561 ANVREIFDKARQSAPCVLFFDELDS-IATQ----RGNSVGD----AGGAADR----VLNQ 607
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMS-HCTPSGFKMLASNY 187
LL +DG+ + II TN + +DPALLRPGR+D I + S +++ S
Sbjct: 608 LLTEMDGM--NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSC- 664
Query: 188 LGIAEHPLFVEIEKLIATAKVTP----ADVAEQLMRNEAPEFALSGLIEF-LESKKRAND 242
+ + P+ +++ L A AK T AD+ E R+ ++A+ IE +E +++ +
Sbjct: 665 --LRKSPVAKDVD-LRALAKYTQGFSGADITEICQRS--CKYAIRENIEKDIEKERKRAE 719
Query: 243 GSEAKEAEERAVQAEKKVLEISE 265
EA E +E + AE K E
Sbjct: 720 SPEAMEEDEEEI-AEIKAGHFEE 741
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 47/164 (28%), Positives = 78/164 (47%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLEL-SNLLGNND 72
L+ + ++ +G +G LLYGPPG+GK+ + A+AN F + E+ S L G ++
Sbjct: 228 LRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESE 287
Query: 73 --LRHILIATENK--SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
LR E SI+ +++ID +++ G +++ +S
Sbjct: 288 SNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH------------GEVERR----IVSQ 331
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM 172
LL +DGL S I++ TN +DPAL R GR D I++
Sbjct: 332 LLTLMDGLKSRA--HVIVMGATNRPNSIDPALRRFGRFDREIDI 373
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 60/195 (30%), Positives = 97/195 (49%)
Query: 32 RGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLLGNND--LRHILIATENKSI 85
+G L++GPPGTGK+SL A + + + + +S LG ++ L + + N +
Sbjct: 419 KGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATP 478
Query: 86 LVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSCGDERI 145
VV ID +L D ++ AR G E+ Q + LLN +DG+ S D +
Sbjct: 479 AVVF-ID---DL-DAIAPARKE-------GGEELSQRMVAT--LLNLMDGI--SRTDGVV 522
Query: 146 IIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIA----EHPLF-VEIE 200
+I TN + ++PAL RPGR+D I + PS + S+ L I H L +++E
Sbjct: 523 VIAATNRPDSIEPALRRPGRLDREIEIG--VPSSTQR--SDILHIILRGMRHSLSNIQVE 578
Query: 201 KL-IATAKVTPADVA 214
+L +AT AD++
Sbjct: 579 QLAMATHGFVGADLS 593
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00072
Identities = 61/231 (26%), Positives = 105/231 (45%)
Query: 18 QRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFD---VYDLEL-SNLLGNND- 72
+ ++ ++R+G G L++GPPG K+ + A+A+ K + V EL S +G ++
Sbjct: 745 KHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEK 804
Query: 73 -LRHILI-ATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGL 129
+R + A N SI+ ++ID L+ R D G + +S L
Sbjct: 805 AVRSLFAKARANAPSIIFFDEIDS-------LASIRGKEND----GVSVSDR---VMSQL 850
Query: 130 LNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
L +DGL G +I TN +++D ALLRPGR D + + + + + +L
Sbjct: 851 LVELDGLHQRVGVT--VIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLR 908
Query: 190 IAEHPLFVEIEKLIATAK-VTPADVAEQLMRNEAPEFALSGLIEFLESKKR 239
+ +++L + K T AD++ L+ EA AL +E E R
Sbjct: 909 KIPCSSDICLKELASITKGYTGADIS--LICREAAIAALEESLEMEEISMR 957
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 67/248 (27%), Positives = 112/248 (45%)
Query: 23 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSNLLG------NNDLRHI 76
Y + G + +G L YGPPGTGK+ L A+A + + ++ LL +++R I
Sbjct: 513 YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDI 572
Query: 77 LIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGL 136
+ VV +D EL D +++AR + AG + ++ LL +DG+
Sbjct: 573 FDKARAAAPTVVF-LD---EL-DSIAKARGGSLGD--AGGASDR----VVNQLLTEMDGM 621
Query: 137 WSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLGIAEHPLF 196
+ +I TN +++DPA+LRPGR+D I + P L+ + + PL
Sbjct: 622 --NAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVP--LPDENARLSILNAQLRKTPLE 677
Query: 197 VEIEKLIATAKVTPADVAEQLMR--NEAPEFALSGLIEFL---ESKKRANDGSEAKEAEE 251
+E L A AK T L+ A ++A+ IE E++K E E +
Sbjct: 678 PGLE-LTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTD 736
Query: 252 RAVQAEKK 259
+AE++
Sbjct: 737 EGAKAEQE 744
Score = 127 (49.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 55/210 (26%), Positives = 99/210 (47%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK---FDVYDLE-LSNLLGNND 72
L+ + ++ +G RG L+YGPPGTGK+ + A+AN F + E +S + G ++
Sbjct: 234 LRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESE 293
Query: 73 --LRHILIATENKS--ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
LR E + I+ +++ID +D+ + G +++ +S
Sbjct: 294 SNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTN------------GEVERR----VVSQ 337
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLA--S 185
LL +DG+ ++I TN +DPAL R GR D +++ +G ++L +
Sbjct: 338 LLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHT 395
Query: 186 NYLGIAEHPLFVEIEKLIA-TAKVTPADVA 214
+ +A+ V++E L A T AD+A
Sbjct: 396 KNMKLADD---VDLEALAAETHGYVGADIA 422
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 64/215 (29%), Positives = 108/215 (50%)
Query: 31 KRGYLLYGPPGTGKSSLIAAMANY--LKF-DVYDLELSNL-LGNND--LRHILIATENKS 84
+ G LLYGPPGTGK+ L A+A + F V EL N+ +G ++ +R++ +
Sbjct: 437 RSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNVFARARAAA 496
Query: 85 ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSCGDER 144
++ D EL D L+ R + D +G + +S LL +DGL SS E
Sbjct: 497 PCIIF-FD---EL-DSLAPNRGRSGD---SGGVMDR----VVSQLLAELDGLHSS--REV 542
Query: 145 IIIFTTNHKERLDPALLRPGRMD--MHINMSHCTPSGFKMLASNYLGIAEHPLFVEIEKL 202
+I TN + LDPALLRPGR D +++ ++ S ++L++ P V + +
Sbjct: 543 FVIGATNRPDLLDPALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRKFKLDPS-VNLSSI 601
Query: 203 I--ATAKVTPADVAEQLMRNEAPEFALSGLIEFLE 235
+ A++T AD+ + ++A A+ +E++E
Sbjct: 602 LEECPAQLTGADIYS--LCSDAMMCAVKRKVEWIE 634
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 61/202 (30%), Positives = 99/202 (49%)
Query: 33 GYLLYGPPGTGKSSLIAAMANYLK---FDVYDLELSNLLGNNDLRHI--LIATENK---S 84
G+L GPPGTGK+ L A+A + F V ELS +I L AT K S
Sbjct: 886 GFLFSGPPGTGKTLLAKAVAGECELPFFSVAASELSTPHSGGTTENIKQLFATARKYAPS 945
Query: 85 ILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGLWSSCGDER 144
I+ +++ID ++ R N D G + K ++T++ LL +DG S +
Sbjct: 946 IIFIDEIDA-------IAAQRTDNSD----GSSRDK--NLTVNALLTEMDGF--SIAEVP 990
Query: 145 IIIFT-TNHKERLDPALLRPGRMDMHINMSHCTPSG----FKMLASNY-LGIAEHPLFVE 198
+ + TNH + LD A+ RPGR D I + FK AS + L E E
Sbjct: 991 VFVMAATNHPQLLDSAITRPGRFDETIYCDLPNKNARLIFFKRFASKHKLNWQE----TE 1046
Query: 199 IEKLIATAK-VTPADVAEQLMR 219
+++L+++A+ ++ A++ +Q++R
Sbjct: 1047 LQQLVSSAQGMSSAEI-DQVLR 1067
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 65/259 (25%), Positives = 113/259 (43%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLLGNND 72
++ E Y +G RG LL+GPPG GK+ L A+A L + + +S + G ++
Sbjct: 284 MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 343
Query: 73 --LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
LR + E V + C I + D + A P +A + +++ ++ LL
Sbjct: 344 QKLRELF---EQ----AVSNAPCIIFI-DEID---AITPKREVASKDMERRI---VAQLL 389
Query: 131 NFIDGLWSSCGDERIIIF-TTNHKERLDPALLRPGRMDMHINMSHCTPSGFKMLASNYLG 189
+D L + R+++ TN + LDPAL R GR D I + + + +
Sbjct: 390 TCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCR 449
Query: 190 IAEHPLFVEIEKLIATAKVTPADVAEQLMR--NEAPEFALSGLIEFLESKKRANDGSEAK 247
P + L A +TP V LM EA A++ ++ L+ +++ N E +
Sbjct: 450 KLRLPQAFDFCHL---AHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNP--EME 504
Query: 248 EAEERAVQAEKKVLEISEE 266
+ + VQ E+ E + E
Sbjct: 505 DLPSKGVQEERLGTEPTSE 523
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 68/250 (27%), Positives = 115/250 (46%)
Query: 23 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF-DVYDLELSNL-LGNND--LRHI 76
++ +G G LL GPPG GK+ L A+AN L F V EL N+ +G ++ +R +
Sbjct: 607 FKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQV 666
Query: 77 LIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNFIDGL 136
+N + V+ D E+ D L R+ E + ++ LL +DGL
Sbjct: 667 FQRAKNSAPCVIF-FD---EV-DALCPRRSDR--------ETGASVRV-VNQLLTEMDGL 712
Query: 137 WSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMSHCTPSG-FKMLASNYLGIAEHPL 195
+ I+ TN + +DPA+LRPGR+D + + P+ +L + + PL
Sbjct: 713 --EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPL 770
Query: 196 F--VEIEKLIATAKV---TPADVAEQLMRNEAPEFALSGLIEFLESKKRANDGSEAKEAE 250
V +E + + T AD++ L+R E ++ L + + +K N+ E K +
Sbjct: 771 DADVNLEAIAGDLRCDCYTGADLSA-LVR----EASICALRQEMARQKSGNEKGELKVSH 825
Query: 251 ERAVQAEKKV 260
+ +A KKV
Sbjct: 826 KHFEEAFKKV 835
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 136 (52.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 64/215 (29%), Positives = 100/215 (46%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--KF-DVYDLE-LSNLL 68
+E L E Y+++G RG L+YGPPG GK+ L +A+++ F V E + L
Sbjct: 130 MELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEFVHKYL 189
Query: 69 GNN-----DLRHILIATENK-SILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQY 122
G D+ H+ EN +I+ +++ID R A G +++ Q
Sbjct: 190 GEGPRIIWDVFHL--DKENAPAIIFIDEIDAIAT-----KRFDAQT------GADREVQ- 235
Query: 123 HITLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINM---SHCTPSG 179
I L LLN +DG + + I+ TN K+ LDP LLRPG +D I H
Sbjct: 236 RILLE-LLNQMDGFDQNISVKAIM--ATNRKDTLDPTLLRPGHLDHKIEFPLPDHRKRLI 292
Query: 180 FKMLASNYLGIAEHPLFVEIEKLIATA-KVTPADV 213
F + S + ++E V +E +A K++ AD+
Sbjct: 293 FSTITSK-MNLSEE---VNVEDYVACPDKISGADI 323
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 57/200 (28%), Positives = 93/200 (46%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLLGNND 72
L + + G + RG LL+GPPGTGK+ L+ +AN V + +S LG +
Sbjct: 265 LHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETE 324
Query: 73 --LRHILIATEN--KSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
LR I SI+ +++ID ++ RA N D +G + + ++
Sbjct: 325 AALRDIFNEARKYQPSIIFIDEIDS-------IAPNRA-NDD---SGEVESR----VVAT 369
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHINMS-HCTPSGFKMLASNY 187
LL +DG+ + G + ++I TN +DPAL RPGR D + + + F +L +
Sbjct: 370 LLTLMDGM-GAAG-KVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQF 427
Query: 188 LGIAE--HPLFVEIEKLIAT 205
++ H L E K IA+
Sbjct: 428 SRMSSDRHVLDSEAIKYIAS 447
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 53/160 (33%), Positives = 79/160 (49%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF-DVYDLELSN-LLGNND 72
L+ E + R+G + +G LLYGPPG K+ A+A + F V E+ N +G ++
Sbjct: 536 LEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESE 595
Query: 73 --LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLL 130
+R I + + ++ D E+ D LS PD G H+ L+ LL
Sbjct: 596 RAIREIFRKARSAAPSIIF-FD---EI-DALS------PDR--DGSSTSAANHV-LTSLL 641
Query: 131 NFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
N IDG+ G +I+ TN + +D ALLRPGR+D HI
Sbjct: 642 NEIDGVEELKGV--VIVAATNRPDEIDAALLRPGRLDRHI 679
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 52/162 (32%), Positives = 78/162 (48%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF-DVYDLELSN-LLGNND 72
L+ + ++ +G + +G LLYGPPG K+ A+A L F V E+ N +G ++
Sbjct: 519 LEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESE 578
Query: 73 --LRHIL--IATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSG 128
+R I + SI+ ++ID +D S AA+ L+
Sbjct: 579 RAIREIFRKARAASPSIIFFDEIDAIAGDRDGDSSTTAASN---------------VLTS 623
Query: 129 LLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHI 170
LLN IDG+ G +I+ TN +DPALLRPGR+D HI
Sbjct: 624 LLNEIDGVEELKGV--VIVGATNKPTEIDPALLRPGRLDRHI 663
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 48/171 (28%), Positives = 82/171 (47%)
Query: 13 LERFLQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL-KFDVYDLE----LSNL 67
+E L + G + RG LL+GPPGTGK+ L+ +AN + + V + +S
Sbjct: 245 IELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKY 304
Query: 68 LGN--NDLRHILIATEN--KSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYH 123
LG N +R I + SI+ +++ID ++ +R ++ +G + +
Sbjct: 305 LGETENAIRDIFNEAKKFQPSIIFMDEIDS-------IAPSRTSDD----SGETESR--- 350
Query: 124 ITLSGLLNFIDGLWSSCGDE-RIIIF-TTNHKERLDPALLRPGRMDMHINM 172
++ LL +DG+ GD RI++ TN +D AL RPGR D + +
Sbjct: 351 -VVAQLLTVMDGM----GDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEI 396
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDL---ELSN-LLGNND 72
++R E Y+ VG + G LL+GPPG GK+ L A+AN K + + EL N +G ++
Sbjct: 512 IKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESE 571
Query: 73 --LRHILIATENKSILVV--EDIDCCIELQD-RLSRARAANPDFLIAGYEQQKQYHITLS 127
+R + + S V+ +++D + +D LS A + ++
Sbjct: 572 RAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSR-----------------VVN 614
Query: 128 GLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMD 167
LL +DGL G +I TN + +DPA+LRPGR+D
Sbjct: 615 TLLTELDGLSDRSGV--YVIAATNRPDIIDPAMLRPGRLD 652
Score = 112 (44.5 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 45/160 (28%), Positives = 71/160 (44%)
Query: 17 LQRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLE----LSNLLGNND 72
++ E Y+ G RG LL+GPPG GK+ L A+AN L + +S + G ++
Sbjct: 194 IKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESE 253
Query: 73 LRHILIATENKSILVVEDIDCCIELQDRLSRARAANPDFLIAGYEQQKQYHITLSGLLNF 132
+ + E KS+ C+ D + A P A E +++ ++ L
Sbjct: 254 KKVREVFEEAKSLAP------CLMFIDEID---AVTPKRESAQREMERRI---VAQFLTC 301
Query: 133 IDGLWSSCGDER--IIIFTTNHKERLDPALLRPGRMDMHI 170
+D L D + ++I TN + LD AL R GR D I
Sbjct: 302 MDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREI 341
Score = 44 (20.5 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 208 VTPADVAEQLMRNEAPEFALSGLIEFLESKKRAND--GSEAKEAEERA-VQAEKKVL-EI 263
V D E+++R A LSG +F + K+ G++ K A + A K++ EI
Sbjct: 345 VPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEI 404
Query: 264 S 264
S
Sbjct: 405 S 405
WARNING: HSPs involving 188 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 266 254 0.00084 114 3 11 22 0.45 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 438
No. of states in DFA: 609 (65 KB)
Total size of DFA: 186 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.44u 0.14s 24.58t Elapsed: 00:00:02
Total cpu time: 24.49u 0.14s 24.63t Elapsed: 00:00:02
Start: Fri May 10 12:27:15 2013 End: Fri May 10 12:27:17 2013
WARNINGS ISSUED: 2