Citrus Sinensis ID: 024551

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------
Protein Sequence
MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAGN
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHcHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHccccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccEEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHcHHHcEEEEEEEEccEccHHHHHHcccccHHHHHHHHHcccccccEcHHHHHHHHHHHHcHHHccccccEEEEcccHHHEc
Coil and Loop (DISEMBL)
maeaaepvfgdkkwslrGMTALVTGGTRGIGYAIVEELARFgasvhtcgrdqNMINERIQEWEskgfkvtgsvcdlsfgdQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVagaisiprlSAYAASKGAINQLTKNLacewatdsirvnavspwavntqisppdlnDLLVQEYVKLIAKtplarsaepneisplvaflclpaasyitgqvisidggytagn
Flexible Loop (DISEMBL)
maeaaepvfgdkkwslrgMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVssvfdgklniLVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIdggytagn
Low Complexity Region (SEG)
MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAGN
Disordered region (IsUnstruct)
********FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY****
Disordered Region (DISOPRED)
*****************GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG*
Disordered Region (DISEMBL)
MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAGN
Disordered Region (DISPRO)
**********DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAGN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAGN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	266	2.2.26 [Sep-21-2011]
P50165	268	Tropinone reductase homol	N/A	no	0.954	0.947	0.635	7e-93
Q9ASX2	266	Tropinone reductase homol	no	no	0.932	0.932	0.565	3e-80
P50162	273	Tropinone reductase 1 OS=	N/A	no	0.954	0.930	0.546	5e-80
P50163	260	Tropinone reductase 2 OS=	N/A	no	0.947	0.969	0.545	3e-77
P50164	260	Tropinone reductase 2 OS=	N/A	no	0.947	0.969	0.541	4e-77
Q8SPU8	279	Dehydrogenase/reductase S	yes	no	0.928	0.885	0.346	3e-31
Q99LB2	279	Dehydrogenase/reductase S	yes	no	0.913	0.870	0.344	6e-31
Q8VID1	279	Dehydrogenase/reductase S	yes	no	0.894	0.853	0.351	1e-30
Q8WNV7	279	Dehydrogenase/reductase S	yes	no	0.932	0.888	0.329	3e-30
P50199	256	Gluconate 5-dehydrogenase	yes	no	0.917	0.953	0.312	4e-30

>sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1

 Score =  340 bits (871), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 162/255 (63%), Positives = 202/255 (79%), Gaps = 1/255 (0%)

Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV 69
           GD++WSLRGMTALVTGGTRGIGYAIVEELA FGA V+TC R QN ++E +++W  KGFKV
Sbjct: 9   GDRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKV 68

Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
           +G VCD+S   QR+ L+E+V+S F+GKLNIL+NNA   + K AT +T E+YS +M TN E
Sbjct: 69  SGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFE 128

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           +SY+LCQLAHPLLKASGNASIVF SS AG I++P  S YAASKGAINQ+TK+LACEWA D
Sbjct: 129 ASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKD 188

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAA 248
           SIRVNAV+PW +NT I          ++ ++ LI + P+ R+ EP+E+S LV +LCLP A
Sbjct: 189 SIRVNAVAPWIINTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLVTYLCLPTA 248

Query: 249 SYITGQVISIDGGYT 263
           SYITGQ+I +DGGYT
Sbjct: 249 SYITGQIICVDGGYT 263

Datura stramonium (taxid: 4076)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1

 Score =  298 bits (763), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 143/253 (56%), Positives = 190/253 (75%), Gaps = 5/253 (1%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           ++WSL+  T LVTGGT+GIG+AIVEE A FGA +HTC R++  +NE + +W+ KGF+VTG
Sbjct: 8   QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTG 67

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           SVCD S   +REKL++TVSS+F GKL+IL+NN   +  K   +YT E++S  +STN+ES+
Sbjct: 68  SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESA 127

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           YHL QLAHPLLKASG  +I+FMSS+AG +S    S Y+A+KGA+NQL +NLACEWA+D I
Sbjct: 128 YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 187

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           R NAV+P  + T ++    +D    E+ K +I++ PL R  EP E+S LVAFLC+PAASY
Sbjct: 188 RANAVAPAVIATPLAEAVYDD----EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY 243

Query: 251 ITGQVISIDGGYT 263
           ITGQ I +DGG T
Sbjct: 244 ITGQTICVDGGLT 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1

 Score =  297 bits (761), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 140/256 (54%), Positives = 194/256 (75%), Gaps = 2/256 (0%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           + +WSL+G TALVTGG++GIGYAIVEELA  GA V+TC R++  ++E ++ W  KG  V 
Sbjct: 14  EGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE 73

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
           GSVCDL    +R+KL++TV+ VFDGKLNILVNNA +V+ K A ++T ++Y+ +M TN E+
Sbjct: 74  GSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEA 133

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           +YHL Q+A+PLLKAS N +++F+SS+AG  ++P +S Y+ASKGAINQ+TK+LACEWA D+
Sbjct: 134 AYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDN 193

Query: 191 IRVNAVSPWAVNTQISPPDL--NDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           IRVN+V+P  + T +    +  N    +E    I KTP+ R+ +P E+S L+AFLC PAA
Sbjct: 194 IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAA 253

Query: 249 SYITGQVISIDGGYTA 264
           SYITGQ+I  DGG+TA
Sbjct: 254 SYITGQIIWADGGFTA 269

Catalyzes the stereospecific reduction of tropinone to tropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

>sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1

 Score =  288 bits (736), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 138/253 (54%), Positives = 186/253 (73%), Gaps = 1/253 (0%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           +W+L G TALVTGG+RGIGY IVEELA  GASV+TC R+Q  +N+ + +W SKGFKV  S
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           VCDLS   +R++L+ TV++ F GKLNILVNNA +V+ K A +YT+E+YS +MS N E++Y
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 123

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           HL  LAHP LKAS   ++VF+SSV+GA+++P  + Y A+KGA++QLT+ LA EWA D+IR
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           VN V P  + T +    + D   +E + KLI +  L R  EP E++ +VAFLC PAASY+
Sbjct: 184 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 243

Query: 252 TGQVISIDGGYTA 264
           TGQ+I +DGG  A
Sbjct: 244 TGQIIYVDGGLMA 256

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Datura stramonium (taxid: 4076)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1

 Score =  287 bits (735), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 137/253 (54%), Positives = 185/253 (73%), Gaps = 1/253 (0%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           +W+L G TALVTGG+RGIGY IVEELA  GASV+TC R+Q  ++E + +W SKGF V  S
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEAS 63

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           VCDLS   +RE+ ++TVS+ F GKLNILVNNA +V+ K A +YT+E+YS +MS N E++Y
Sbjct: 64  VCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAY 123

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           HL  LAHP LKAS   ++VF+SS++GA ++P  + Y A+KGA++QLT+ LA EWA D+IR
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           VN V P  + T +    + D   +E + KLI +  L R  EP E++ +VAFLC PAASY+
Sbjct: 184 VNGVGPGVIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAASYV 243

Query: 252 TGQVISIDGGYTA 264
           TGQ+I +DGG+ A
Sbjct: 244 TGQIIYVDGGFMA 256

Catalyzes the stereospecific reduction of tropinone to pseudotropine.

Hyoscyamus niger (taxid: 4079)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 6

>sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2

 Score =  135 bits (340), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 133/251 (52%), Gaps = 4/251 (1%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           ++  L    ALVT  T GIG+AI   LA+ GA V    R Q  ++  +   + +G  VTG
Sbjct: 27  RRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTG 86

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEE-YSSVMSTNVES 130
           +VC +   + RE+L+ T   +  G ++IL++NAA+     +     EE +  ++  NV++
Sbjct: 87  TVCHVGKAEDRERLVATAVKLHGG-VDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKA 145

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           +  L +   P +   G  SIV +SS+A     P L  Y  SK A+  LTKNLA E A  +
Sbjct: 146 TALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESN 205

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           +RVN ++P  + T  S     D   QE +K  A   + R  +P E + +V+FLC   ASY
Sbjct: 206 VRVNCLAPGLIRTSFSRVLWEDPARQESIK--ATFQIKRIGKPEECAGIVSFLCSEDASY 263

Query: 251 ITGQVISIDGG 261
           ITG+ + + GG
Sbjct: 264 ITGETVVVAGG 274

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=3

 Score =  134 bits (337), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 128/247 (51%), Gaps = 4/247 (1%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L    ALVT  T GIG+AI   LA  GA V    R Q  ++  +   + +G  VTG VC 
Sbjct: 31  LSNKVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCH 90

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHL 134
           +   + REKLI T      G ++ILV+NAA+        + T E +  V+S NV ++  +
Sbjct: 91  VGKAEDREKLITTALKRHQG-IDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMM 149

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +   P ++  G  S+V + SVAG    P L  Y  SK A+  LTKN A E A  +IRVN
Sbjct: 150 IKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVN 209

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
            ++P  + T+ S     +   ++++K      + R  +P + + +V+FLC   ASYI G+
Sbjct: 210 CLAPGLIKTRFSSVLWEEKAREDFIK--EAMQIRRLGKPEDCAGIVSFLCSEDASYINGE 267

Query: 255 VISIDGG 261
            + + GG
Sbjct: 268 TVVVGGG 274

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=2

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 126/242 (52%), Gaps = 4/242 (1%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVT  T GIG AI   LA  GA V    R Q  ++  +   + +G  VTG VC +   +
Sbjct: 36  ALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGKAE 95

Query: 81  QREKLIETVSSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
            REKL+     +  G ++ILV+NAA+        + T E ++ V+S NV +S  + +   
Sbjct: 96  DREKLVNMALKLHQG-IDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAVV 154

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P ++  G  S+V +SSVAG +  P L  Y  SK A+  LTKN A E A  +IRVN ++P 
Sbjct: 155 PAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPG 214

Query: 200 AVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISID 259
            + T  S     +   +E +K      + R  +P +   +V+FLC   ASYI G+ + + 
Sbjct: 215 LIKTHFSSVLWKEKAREEMIK--ETMQIRRLGKPEDCVGIVSFLCSEDASYINGETVVVG 272

Query: 260 GG 261
           GG
Sbjct: 273 GG 274

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=2

 Score =  132 bits (331), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 132/252 (52%), Gaps = 4/252 (1%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           +++  L    ALVT  T GIG AI   LA+ GA V    R Q  ++  +   + +G  VT
Sbjct: 26  ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 85

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVE 129
           G+VC +   + RE+L+    ++  G ++ILV+NAA+        + T E +  ++  NV+
Sbjct: 86  GTVCHVGKAEDRERLVAMAVNLHGG-VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVK 144

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           ++  + +   P ++  G  S++ +SSV      P L  Y  SK A+  LTKNLA E A  
Sbjct: 145 ATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 204

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           +IRVN ++P  + T  S     D   +EY+K      + R   P + + +V+FLC   AS
Sbjct: 205 NIRVNCLAPGLIKTNFSQVLWMDKARKEYMK--ESLRIRRLGNPEDCAGIVSFLCSEDAS 262

Query: 250 YITGQVISIDGG 261
           YITG+ + + GG
Sbjct: 263 YITGETVVVGGG 274

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|P50199|GNO_GLUOX Gluconate 5-dehydrogenase OS=Gluconobacter oxydans (strain 621H) GN=gno PE=1 SV=1

 Score =  132 bits (331), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 142/253 (56%), Gaps = 9/253 (3%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           +SL G  ALVTG +RGIG  + + LAR+GA V   GR+   ++     +E++G K + +V
Sbjct: 7   FSLSGARALVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLKASTAV 66

Query: 74  CDLSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
            D++  DQ + +I+ V+++    G ++IL+NNA +       E++ +++  +MSTNV + 
Sbjct: 67  FDVT--DQ-DAVIDGVAAIERDMGPIDILINNAGIQRRAPLEEFSRKDWDDLMSTNVNAV 123

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           + + Q     +   G   IV + SV   ++ P ++ Y A+KGA+  LTK +A +W    +
Sbjct: 124 FFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGL 183

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           ++N ++P    T+++   + D   +E+   L  +TP  R  +  E+     FL   A+S+
Sbjct: 184 QINGLAPGYFATEMTERLVAD---EEFTDWLCKRTPAGRWGQVEELVGAAVFLSSRASSF 240

Query: 251 ITGQVISIDGGYT 263
           + GQV+ +DGG T
Sbjct: 241 VNGQVLMVDGGIT 253

Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD.

Gluconobacter oxydans (strain 621H) (taxid: 290633)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	266
359482090	324	PREDICTED: tropinone reductase homolog i	0.969	0.796	0.680	1e-102
449440004	259	PREDICTED: tropinone reductase homolog [	0.947	0.972	0.665	2e-98
297740327	250	unnamed protein product [Vitis vinifera]	0.913	0.972	0.689	1e-96
147779411	307	hypothetical protein VITISV_028249 [Viti	0.921	0.798	0.684	6e-96
255584542	266	tropinone reductase, putative [Ricinus c	0.943	0.943	0.669	2e-94
224087456	275	predicted protein [Populus trichocarpa]	0.988	0.956	0.640	8e-94
225440460	267	PREDICTED: tropinone reductase homolog [	0.947	0.943	0.620	1e-93
224087453	267	predicted protein [Populus trichocarpa]	0.954	0.951	0.631	5e-93
297740326	277	unnamed protein product [Vitis vinifera]	0.951	0.913	0.629	7e-92
225440458	325	PREDICTED: tropinone reductase 1-like [V	0.951	0.778	0.629	9e-92

>gi|359482090|ref|XP_002271363.2| PREDICTED: tropinone reductase homolog isoform 1 [Vitis vinifera]

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/263 (68%), Positives = 214/263 (81%), Gaps = 5/263 (1%)

Query: 4   AAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE 63
           A+EP    K+WSL+GMTAL+TGGTRGIGYAIVEELA  GA VHTC R+Q  +NER+QEWE
Sbjct: 60  ASEPSCRAKRWSLKGMTALITGGTRGIGYAIVEELAELGAIVHTCSRNQTELNERLQEWE 119

Query: 64  SKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV 123
            KGF+V+GSVCDL+   QREKL ETVSS+F+GKLNILVNNAA V +K  T YT E+ SS+
Sbjct: 120 GKGFRVSGSVCDLTSRAQREKLTETVSSLFEGKLNILVNNAATVALKAPTNYTAEDCSSI 179

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
           + TN ES YHLCQLAHPLLKASG  SI+F+SSVAG IS+P +S YAA+KGAINQ+TKNLA
Sbjct: 180 LQTNFESPYHLCQLAHPLLKASGRGSIIFISSVAGLISLPHMSVYAATKGAINQVTKNLA 239

Query: 184 CEWATDSIRVNAVSPWAVNTQISP---PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           CEWA D+IR NAV+PW V T + P   PD  + +   Y +L+A+TPL R AEP+E+SPLV
Sbjct: 240 CEWAKDNIRTNAVAPWTVRTSVRPILEPD--NPMATAYPQLLARTPLHRIAEPDEVSPLV 297

Query: 241 AFLCLPAASYITGQVISIDGGYT 263
           AFLCLPAASYITGQVI +DGG++
Sbjct: 298 AFLCLPAASYITGQVICVDGGFS 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440004|ref|XP_004137775.1| PREDICTED: tropinone reductase homolog [Cucumis sativus] gi|449524683|ref|XP_004169351.1| PREDICTED: tropinone reductase homolog [Cucumis sativus]

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 169/254 (66%), Positives = 207/254 (81%), Gaps = 2/254 (0%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           ++WSL G TALVTGGTRGIGYAIVEELA  GASVHTC R+Q  I++R+QEW+ KGFKVT 
Sbjct: 6   QRWSLNGFTALVTGGTRGIGYAIVEELASLGASVHTCSRNQTEIDQRLQEWQQKGFKVTA 65

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           SVCDL+   QR++LI+TVSS+F+G LNILVNNA  V MK ATEYT E+Y+ +MSTN E+ 
Sbjct: 66  SVCDLTSSSQRQQLIDTVSSIFNGTLNILVNNAGTVTMKTATEYTTEDYNYMMSTNFEAP 125

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           YHL Q++HP+LKASG  SIVF+SS+AG  ++PR+S YAA+KGAINQ+TKNLACEWA D+I
Sbjct: 126 YHLSQISHPILKASGYGSIVFVSSIAGVTALPRISIYAATKGAINQITKNLACEWAKDNI 185

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           R+N V+PW V T IS PD     V+EY +LI +TP  R  EP EIS +VAFLCLPAASY+
Sbjct: 186 RINTVAPWGVRTTISTPDA--AAVEEYGRLIGRTPAGRLGEPEEISSVVAFLCLPAASYV 243

Query: 252 TGQVISIDGGYTAG 265
           +GQ+I +DGGYTAG
Sbjct: 244 SGQIICVDGGYTAG 257

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740327|emb|CBI30509.3| unnamed protein product [Vitis vinifera]

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 171/248 (68%), Positives = 203/248 (81%), Gaps = 5/248 (2%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           MTAL+TGGTRGIGYAIVEELA  GA VHTC R+Q  +NER+QEWE KGF+V+GSVCDL+ 
Sbjct: 1   MTALITGGTRGIGYAIVEELAELGAIVHTCSRNQTELNERLQEWEGKGFRVSGSVCDLTS 60

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
             QREKL ETVSS+F+GKLNILVNNAA V +K  T YT E+ SS++ TN ES YHLCQLA
Sbjct: 61  RAQREKLTETVSSLFEGKLNILVNNAATVALKAPTNYTAEDCSSILQTNFESPYHLCQLA 120

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
           HPLLKASG  SI+F+SSVAG IS+P +S YAA+KGAINQ+TKNLACEWA D+IR NAV+P
Sbjct: 121 HPLLKASGRGSIIFISSVAGLISLPHMSVYAATKGAINQVTKNLACEWAKDNIRTNAVAP 180

Query: 199 WAVNTQISP---PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           W V T + P   PD  + +   Y +L+A+TPL R AEP+E+SPLVAFLCLPAASYITGQV
Sbjct: 181 WTVRTSVRPILEPD--NPMATAYPQLLARTPLHRIAEPDEVSPLVAFLCLPAASYITGQV 238

Query: 256 ISIDGGYT 263
           I +DGG++
Sbjct: 239 ICVDGGFS 246

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147779411|emb|CAN74482.1| hypothetical protein VITISV_028249 [Vitis vinifera]

 Score =  356 bits (913), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 171/250 (68%), Positives = 202/250 (80%), Gaps = 5/250 (2%)

Query: 4   AAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE 63
           A+EP    K+WSL+GMTALVTGGTRGIGYAIVEELA  GA VHTC R+Q  +NER+QEWE
Sbjct: 3   ASEPSCRTKRWSLKGMTALVTGGTRGIGYAIVEELAELGAIVHTCSRNQTELNERLQEWE 62

Query: 64  SKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV 123
            KGF+V+GSVCDL+   QREKL ETVSS+F+GKLNILVNNAA V +K  T YT E+ SS+
Sbjct: 63  GKGFRVSGSVCDLTSRAQREKLTETVSSLFEGKLNILVNNAATVALKAXTNYTAEDCSSI 122

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
           + TN ES YHLCQLAHPLLKASG  SI+F+SSVAG IS+P +S YAA+KGAINQ+TKNLA
Sbjct: 123 LQTNFESPYHLCQLAHPLLKASGRGSIIFISSVAGLISLPHMSVYAATKGAINQVTKNLA 182

Query: 184 CEWATDSIRVNAVSPWAVNTQISP---PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           CEWA D+IR NAV+PW V T + P   PD  + +   Y +L+A+TPL R AEP+E+SPLV
Sbjct: 183 CEWAKDNIRTNAVAPWTVRTSVRPILEPD--NPMATAYPQLLARTPLHRIAEPDEVSPLV 240

Query: 241 AFLCLPAASY 250
           AFLCLPAASY
Sbjct: 241 AFLCLPAASY 250

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584542|ref|XP_002532998.1| tropinone reductase, putative [Ricinus communis] gi|223527227|gb|EEF29390.1| tropinone reductase, putative [Ricinus communis]

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 170/254 (66%), Positives = 204/254 (80%), Gaps = 3/254 (1%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           D++WSL+GMTALVTGGTRGIGYA+VEELA FGA V+TC R++  +NERI+EWE KGF V 
Sbjct: 11  DQRWSLQGMTALVTGGTRGIGYAVVEELAGFGAKVYTCSRNEKELNERIKEWEIKGFNVC 70

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
           GSVCDL   DQR+ LI+TVSS F+GKLNILVNNA  +  K   +YTLE+YSS+MSTN+ES
Sbjct: 71  GSVCDLICRDQRQNLIDTVSSSFEGKLNILVNNAGTIKHKNTVDYTLEDYSSIMSTNLES 130

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
            YHLCQLA+PLLKASGN SIVF+SSVAG I++P +S YAA+KGAINQLTKNLACEWA D+
Sbjct: 131 PYHLCQLAYPLLKASGNGSIVFLSSVAGFIALPLISVYAATKGAINQLTKNLACEWAKDN 190

Query: 191 IRVNAVSPWAVNTQI-SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           IR NAV+P    T I   PD    +++ Y  +I + P+   AEPNE+S LVAFLCLPAAS
Sbjct: 191 IRTNAVAPSGTRTTILQEPD--PAVIEAYAGIIPRNPIRPIAEPNEVSSLVAFLCLPAAS 248

Query: 250 YITGQVISIDGGYT 263
           YI GQVI +DGG+T
Sbjct: 249 YINGQVICVDGGFT 262

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087456|ref|XP_002308174.1| predicted protein [Populus trichocarpa] gi|222854150|gb|EEE91697.1| predicted protein [Populus trichocarpa]

 Score =  349 bits (895), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 171/267 (64%), Positives = 211/267 (79%), Gaps = 4/267 (1%)

Query: 1   MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ 60
           MAEA E    + +WSL+GMTALVTGGTRGIG+AIVEELA FGA+VHTC R++  ++E I+
Sbjct: 1   MAEA-EVSSRESRWSLKGMTALVTGGTRGIGFAIVEELAGFGAAVHTCSRNETKLDECIR 59

Query: 61  EWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEY 120
           EWESKGF+VTGSVCD+S   QR+KLIE VSS F GKLNILVNNAA VV K +T+ T E+ 
Sbjct: 60  EWESKGFRVTGSVCDVSCRTQRDKLIEKVSSTFQGKLNILVNNAAAVVSKNSTKVTAEDM 119

Query: 121 SSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
           ++ + TNVE+SYHLCQLAHPLLKASGN SIVF+SSVA  +++P LS Y ASKGA+NQLTK
Sbjct: 120 ANTLGTNVEASYHLCQLAHPLLKASGNGSIVFISSVAAVVALPTLSFYGASKGALNQLTK 179

Query: 181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV---KLIAKTPLARSAEPNEIS 237
           +LACEWA D IR NAVSPW + T +    L     ++     +++A+TP++R  E +EIS
Sbjct: 180 SLACEWAHDKIRANAVSPWIIKTPLLDASLAKSPSEQRAGMSRIVAQTPISRLGEASEIS 239

Query: 238 PLVAFLCLPAASYITGQVISIDGGYTA 264
            LVAFLCLP A+YITGQ+IS+DGGYTA
Sbjct: 240 SLVAFLCLPTAAYITGQIISVDGGYTA 266

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440460|ref|XP_002271837.1| PREDICTED: tropinone reductase homolog [Vitis vinifera] gi|297740324|emb|CBI30506.3| unnamed protein product [Vitis vinifera]

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 157/253 (62%), Positives = 207/253 (81%), Gaps = 1/253 (0%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           +++WSL GMTALVTGG+RGIG+AIVEELA FGA+VHTC R+Q  +++R+QEW++KGFKV+
Sbjct: 10  NRRWSLEGMTALVTGGSRGIGHAIVEELAAFGATVHTCSRNQEELDQRLQEWKNKGFKVS 69

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
            S+CD+S   QR +L+ETVSS+FDGKL+ILVNNA  +++K ATE T E++S++M TN ES
Sbjct: 70  ASLCDVSSRSQRTQLMETVSSIFDGKLSILVNNAGTIILKEATECTAEDFSTIMGTNFES 129

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           +YHLCQL HPLLKASGN SIVF+SS++G ++ P  S YAASKGA+NQ+TKNLACEWA D 
Sbjct: 130 AYHLCQLGHPLLKASGNGSIVFISSISGLLAFPASSIYAASKGAMNQVTKNLACEWAKDG 189

Query: 191 IRVNAVSPWAVNTQ-ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           IRVN ++PW + T  +   D +  + +   +LI++TP++R  EP+E+SPLVAFLC P AS
Sbjct: 190 IRVNTIAPWIIKTSLLHVIDDHPNIKENMSRLISRTPISRPGEPDEVSPLVAFLCFPVAS 249

Query: 250 YITGQVISIDGGY 262
           YITGQVI +DGGY
Sbjct: 250 YITGQVICVDGGY 262

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087453|ref|XP_002308173.1| predicted protein [Populus trichocarpa] gi|222854149|gb|EEE91696.1| predicted protein [Populus trichocarpa]

 Score =  346 bits (888), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 161/255 (63%), Positives = 204/255 (80%), Gaps = 1/255 (0%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           +++WSL+GMTALVTGGTRGIG+AIVEELA FGA V+TC R++  +NERI+EWE KGF V 
Sbjct: 10  EQRWSLKGMTALVTGGTRGIGFAIVEELAGFGARVYTCSRNEKELNERIKEWEIKGFNVR 69

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
           GSVCDLS  D R+KLI +V+S FDGKLNILVNNAA  +++++ +YTLE+YS +M+TN++S
Sbjct: 70  GSVCDLSSQDDRQKLIGSVTSAFDGKLNILVNNAATAILRKSLDYTLEDYSFIMNTNLQS 129

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
            YHLCQLAHPLLKASGN +IVF+SSVAG +++P LS Y+A+KGAINQLT+NLACEWA D+
Sbjct: 130 PYHLCQLAHPLLKASGNGNIVFISSVAGIVALPMLSVYSATKGAINQLTRNLACEWAKDN 189

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           IR N V+P  + T +      D  V E Y  + ++ P++R  EPNE+S LV FLCLP AS
Sbjct: 190 IRTNTVAPGGIRTTVGQDQSADPDVGEAYSDMFSRIPISRIGEPNEVSSLVVFLCLPTAS 249

Query: 250 YITGQVISIDGGYTA 264
           YI GQVI +DGG TA
Sbjct: 250 YINGQVICVDGGLTA 264

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740326|emb|CBI30508.3| unnamed protein product [Vitis vinifera]

 Score =  342 bits (878), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 160/254 (62%), Positives = 206/254 (81%), Gaps = 1/254 (0%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           + +WSL+G TALVTGGTRGIG+AIVEELA FGA+VHTC R+Q  ++E +Q W+SKGFKV+
Sbjct: 5   NSRWSLQGTTALVTGGTRGIGHAIVEELAAFGATVHTCSRNQKELDEMLQVWKSKGFKVS 64

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
           GSVCD+S   QR +L++TVSS+FDGKLNILVNNA  V+ KR  EYT+E+ S +M TN ES
Sbjct: 65  GSVCDVSSRPQRTQLMDTVSSLFDGKLNILVNNAGTVISKRTEEYTVEDVSIIMGTNFES 124

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           +YHL QL +PLLKASG  SIVF+SSVAG +++P +S YAASKGA+NQ+T+NLACEWA D+
Sbjct: 125 AYHLSQLGYPLLKASGRGSIVFISSVAGVMALPVISIYAASKGAMNQVTRNLACEWAEDN 184

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           IRVN ++PW +NT +     +D   +E +K +I++TP+ R  EP+E+S LVAFLC PAAS
Sbjct: 185 IRVNTIAPWVINTSLIHKAKDDPSSEEKIKRIISRTPICRMGEPDEVSSLVAFLCFPAAS 244

Query: 250 YITGQVISIDGGYT 263
           YITGQVI +DGGY+
Sbjct: 245 YITGQVICVDGGYS 258

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440458|ref|XP_002271432.1| PREDICTED: tropinone reductase 1-like [Vitis vinifera]

 Score =  342 bits (877), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 160/254 (62%), Positives = 206/254 (81%), Gaps = 1/254 (0%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           + +WSL+G TALVTGGTRGIG+AIVEELA FGA+VHTC R+Q  ++E +Q W+SKGFKV+
Sbjct: 12  NSRWSLQGTTALVTGGTRGIGHAIVEELAAFGATVHTCSRNQKELDEMLQVWKSKGFKVS 71

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
           GSVCD+S   QR +L++TVSS+FDGKLNILVNNA  V+ KR  EYT+E+ S +M TN ES
Sbjct: 72  GSVCDVSSRPQRTQLMDTVSSLFDGKLNILVNNAGTVISKRTEEYTVEDVSIIMGTNFES 131

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           +YHL QL +PLLKASG  SIVF+SSVAG +++P +S YAASKGA+NQ+T+NLACEWA D+
Sbjct: 132 AYHLSQLGYPLLKASGRGSIVFISSVAGVMALPVISIYAASKGAMNQVTRNLACEWAEDN 191

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           IRVN ++PW +NT +     +D   +E +K +I++TP+ R  EP+E+S LVAFLC PAAS
Sbjct: 192 IRVNTIAPWVINTSLIHKAKDDPSSEEKIKRIISRTPICRMGEPDEVSSLVAFLCFPAAS 251

Query: 250 YITGQVISIDGGYT 263
           YITGQVI +DGGY+
Sbjct: 252 YITGQVICVDGGYS 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	266
TAIR|locus:2043052	262	AT2G29290 [Arabidopsis thalian	0.936	0.950	0.611	4.5e-82
TAIR|locus:2043037	268	AT2G29150 [Arabidopsis thalian	0.969	0.962	0.601	2.9e-80
TAIR|locus:2152815	264	AT5G06060 [Arabidopsis thalian	0.939	0.946	0.602	9.7e-80
TAIR|locus:2043177	269	SAG13 "senescence-associated g	0.962	0.951	0.591	1.6e-79
TAIR|locus:2043152	268	AT2G29370 [Arabidopsis thalian	0.981	0.973	0.581	8.7e-79
TAIR|locus:2043167	271	AT2G29360 [Arabidopsis thalian	0.977	0.959	0.549	1.1e-76
TAIR|locus:2042982	307	AT2G29340 [Arabidopsis thalian	0.943	0.817	0.581	3.1e-76
TAIR|locus:2043012	269	AT2G29320 [Arabidopsis thalian	0.943	0.933	0.588	3.9e-76
TAIR|locus:2043027	262	AT2G29310 [Arabidopsis thalian	0.943	0.958	0.581	1e-75
TAIR|locus:2042992	260	TRI "tropinone reductase" [Ara	0.943	0.965	0.573	1.7e-75

TAIR|locus:2043052 AT2G29290 [Arabidopsis thaliana (taxid:3702)]

 Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
 Identities = 156/255 (61%), Positives = 201/255 (78%)

Query:    11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
             DK+WSL+GM ALVTGGT+GIG A+VEEL+  GA VHTC RD+  + ER++EW+ KGF+VT
Sbjct:     2 DKRWSLQGMNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVT 61

Query:    71 GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
              S+CD+S  +QREKL+ETVSS+F GKLNILVNN   +++K  TEYT EE+S +M+TN++S
Sbjct:    62 TSICDVSLREQREKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDS 121

Query:   131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
             ++H+ QLAHPLLKASG+ SIV MSS+AG + +   S Y A+KGA+NQL +NLACEWA+D+
Sbjct:   122 AFHISQLAHPLLKASGSGSIVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDN 181

Query:   191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA--KTPLARSAEPNEISPLVAFLCLPAA 248
             IR NA+ PW + T    P ++DLL  E +K  A  +TP+ R  E NE+SPLVAFLCLPAA
Sbjct:   182 IRTNAICPWLITT----PLISDLLSVEEMKKEAEERTPMGRVGEANEVSPLVAFLCLPAA 237

Query:   249 SYITGQVISIDGGYT 263
             SYITGQVI +DGG T
Sbjct:   238 SYITGQVICVDGGLT 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043037 AT2G29150 [Arabidopsis thaliana (taxid:3702)]

 Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
 Identities = 157/261 (60%), Positives = 202/261 (77%)

Query:     1 MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ 60
             MA+A E      +WSL GMTALVTGG++G+G A+VEELA  GA VHTC RD+  + ER++
Sbjct:     1 MAKAGENSRDKSRWSLEGMTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQERLR 60

Query:    61 EWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEY 120
             EW++KGF+VT SVCD+S  +QREKL+ETVSSVF GKLNILVNNA   ++K +TEYT E+Y
Sbjct:    61 EWQAKGFEVTTSVCDVSSREQREKLMETVSSVFQGKLNILVNNAGTGIIKPSTEYTAEDY 120

Query:   121 SSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
             S +M+TN+ES++HL Q+AHPLLKASG+ SIVFMSSVAG +     S Y ASKGA+NQL +
Sbjct:   121 SFLMATNLESAFHLSQIAHPLLKASGSGSIVFMSSVAGLVHTGA-SIYGASKGAMNQLGR 179

Query:   181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
             +LACEWA+D+IRVN+V PW + T ++    +D  +++ V+   KTP+ R  E NE+S LV
Sbjct:   180 SLACEWASDNIRVNSVCPWVITTPLTSFIFSDEKLRKAVE--DKTPMGRVGEANEVSSLV 237

Query:   241 AFLCLPAASYITGQVISIDGG 261
             AFLC PAASYITGQ I +DGG
Sbjct:   238 AFLCFPAASYITGQTICVDGG 258

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2152815 AT5G06060 [Arabidopsis thaliana (taxid:3702)]

 Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
 Identities = 153/254 (60%), Positives = 194/254 (76%)

Query:    11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
             DK+WSL G TALVTGGTRGIG A+VEELA+FGA VHTC R+Q  +N  + +W++ G  V+
Sbjct:     4 DKRWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVS 63

Query:    71 GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
             GSVCD S  DQREKLI+  SS F GKLNIL+NN    V K   EY+ EEY+ +MSTN+ES
Sbjct:    64 GSVCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLES 123

Query:   131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
             ++HL Q+AHPLLKASG  SIVF+SSVAG + +   S Y A+KGA+NQLT+NLACEWA+D+
Sbjct:   124 AFHLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDN 183

Query:   191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAAS 249
             IR N V+PW + T +    L     +E+V+ ++++TPL R  EP E+S LVAFLCLPA+S
Sbjct:   184 IRTNCVAPWYIKTSLVETLLEK---KEFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASS 240

Query:   250 YITGQVISIDGGYT 263
             YITGQVIS+DGG+T
Sbjct:   241 YITGQVISVDGGFT 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2043177 SAG13 "senescence-associated gene 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 155/262 (59%), Positives = 197/262 (75%)

Query:     4 AAEPVFGDK-KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW 62
             A E   G+  +WSL GMTALVTGG++GIG A+VEELA  GA VHTC RD+  + ER++EW
Sbjct:     2 AKEGGLGENSRWSLGGMTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLREW 61

Query:    63 ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS 122
             ++KGF+VT SVCD+S  DQR KL+ETVSS++ GKLNILVNN    + K  TEYT E++S 
Sbjct:    62 QAKGFQVTTSVCDVSSRDQRVKLMETVSSLYQGKLNILVNNVGTSIFKPTTEYTAEDFSF 121

Query:   123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
             VM+TN+ES++HL QLAHPLLKASG+ SIV +SS AG + +   S Y A+KGA+NQL +NL
Sbjct:   122 VMATNLESAFHLSQLAHPLLKASGSGSIVLISSAAGVVHVNVGSIYGATKGAMNQLARNL 181

Query:   183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVA 241
             ACEWA+D+IR N+V PW + T +S    ND   +E+ K  +  TP+ R  E NE+SPLVA
Sbjct:   182 ACEWASDNIRTNSVCPWYITTPLS----NDFFDEEFKKEAVRTTPMGRVGEANEVSPLVA 237

Query:   242 FLCLPAASYITGQVISIDGGYT 263
             FLCLP+ASYITGQ I +DGG T
Sbjct:   238 FLCLPSASYITGQTICVDGGAT 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0007568 "aging" evidence=IEP;RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=TAS

GO:0002213 "defense response to insect" evidence=IEP

TAIR|locus:2043152 AT2G29370 [Arabidopsis thaliana (taxid:3702)]

 Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
 Identities = 153/263 (58%), Positives = 198/263 (75%)

Query:     1 MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ 60
             MA+  E +    KWSL GMTALVTGG++G+G A+VEELA  GA VHTC RD+  + E ++
Sbjct:     1 MAKRGESLRDKPKWSLEGMTALVTGGSKGLGKAVVEELAMLGARVHTCARDETQLQESLR 60

Query:    61 EWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEY 120
             EW++KG +VT SVCD+S  DQREKL+ETVSS+F GKL+ILV N  + V+K  TE T EE+
Sbjct:    61 EWQAKGLQVTTSVCDVSSRDQREKLMETVSSLFQGKLSILVPNVGIGVLKPTTECTAEEF 120

Query:   121 SSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
             S +++TN+ES++H  QLAHPLLKASG+ +IV MSSVAG +++   S Y A+KGA+NQL +
Sbjct:   121 SFIIATNLESTFHFSQLAHPLLKASGSGNIVLMSSVAGVVNLGNTSIYGATKGAMNQLAR 180

Query:   181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
             NLACEWA+D+IR N+V PW + T  +   L D  V+E V+ +  TPL R  E NE+S LV
Sbjct:   181 NLACEWASDNIRANSVCPWFITTPSTKDFLGDKDVKEKVESV--TPLRRVGEANEVSSLV 238

Query:   241 AFLCLPAASYITGQVISIDGGYT 263
             AFLCLPAASYITGQ I +DGG+T
Sbjct:   239 AFLCLPAASYITGQTICVDGGFT 261

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2043167 AT2G29360 [Arabidopsis thaliana (taxid:3702)]

 Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
 Identities = 145/264 (54%), Positives = 199/264 (75%)

Query:     1 MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ 60
             MA+  E +    +WSL GMTALVTGG++GIG A+VEELA  GA +HTC RD+  + E ++
Sbjct:     1 MAKTGESLRDKPRWSLVGMTALVTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLR 60

Query:    61 EWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEY 120
             +W++KGF+VT SVCD+S  D+REKL+ETVS++F+GKLNILVNN    ++K   ++T E++
Sbjct:    61 KWQAKGFQVTTSVCDVSSRDKREKLMETVSTIFEGKLNILVNNVGTCIVKPTLQHTAEDF 120

Query:   121 SSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
             S  M+TN+ES++HL QLAHPLLKASG+ SIV +SSV+G + +   S Y  SKGA+NQL +
Sbjct:   121 SFTMATNLESAFHLSQLAHPLLKASGSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGR 180

Query:   181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLI-AKTPLARSAEPNEISPL 239
             NLACEWA+D+IR N+V PW + T +    L++   +E+ K + ++ P+ R  E NE+S L
Sbjct:   181 NLACEWASDNIRTNSVCPWFIETPLVTESLSN---EEFRKEVESRPPMGRVGEVNEVSSL 237

Query:   240 VAFLCLPAASYITGQVISIDGGYT 263
             VAFLCLPAASYITGQ I +DGG+T
Sbjct:   238 VAFLCLPAASYITGQTICVDGGFT 261

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0015979 "photosynthesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2042982 AT2G29340 [Arabidopsis thaliana (taxid:3702)]

 Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
 Identities = 147/253 (58%), Positives = 191/253 (75%)

Query:    11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
             DK+WSL+GMTALVTGG  GIGYAIVEELA FGA +H C   +  +N+ + EWE KGF+V+
Sbjct:     2 DKRWSLKGMTALVTGGASGIGYAIVEELAGFGARIHVCDISEAKLNQSLSEWEKKGFQVS 61

Query:    71 GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
             GSVCD++   +RE+L++TVSS FDGKLNILV+N  ++  K  TEYT ++++  +S+NVE+
Sbjct:    62 GSVCDVASRPEREELMQTVSSQFDGKLNILVSNVGVIRSKPTTEYTEDDFAFHISSNVEA 121

Query:   131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
             +YH  QL+HPLLKASG  SI+F+SS+AG IS    S Y  +KGA+ QL KNLACEWA D 
Sbjct:   122 AYHFSQLSHPLLKASGYGSIIFVSSIAGVISFDAGSIYGLTKGALIQLAKNLACEWAKDG 181

Query:   191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
             IR NAV+P  +NT +S   L D+  ++   L+++TPL R  EPNE++ LVAFLCLPAASY
Sbjct:   182 IRANAVAPNVINTPLSQSYLEDVSFKK--ALLSRTPLGRVGEPNEVASLVAFLCLPAASY 239

Query:   251 ITGQVISIDGGYT 263
             ITGQ I +DGG T
Sbjct:   240 ITGQTICVDGGLT 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043012 AT2G29320 [Arabidopsis thaliana (taxid:3702)]

 Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
 Identities = 150/255 (58%), Positives = 192/255 (75%)

Query:    11 DKK-WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV 69
             DK+ WSL+GMTALVTG   GIGYAIVEELA FGA +H C   + ++N+ + EWE+KGF+V
Sbjct:     7 DKRLWSLQGMTALVTGAASGIGYAIVEELAGFGAKIHICDISKTLLNQSLSEWENKGFQV 66

Query:    70 TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
             +GSVCD++   +REKL++TVSS+FDGKLNILVNN  ++  K  TEY  ++++  +STN+E
Sbjct:    67 SGSVCDVTSHPEREKLMQTVSSIFDGKLNILVNNVGVLRGKPTTEYVADDFTFHISTNLE 126

Query:   130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL-SAYAASKGAINQLTKNLACEWAT 188
             ++YH CQL+HPLLKASG  SIVF+SSVAG +S+    S Y  +KGA+NQL +NLACEWA 
Sbjct:   127 AAYHFCQLSHPLLKASGYGSIVFLSSVAGVVSLIDCGSIYGLTKGALNQLARNLACEWAK 186

Query:   189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
             D IR NAV+P  V T  S   L D+  +E   L+++TPL R  EPNE+S LV FLCLPAA
Sbjct:   187 DGIRANAVAPNVVKTAQSQSFLEDVSKKE--GLLSRTPLGRVGEPNEVSSLVVFLCLPAA 244

Query:   249 SYITGQVISIDGGYT 263
             SYITGQ I +DGG T
Sbjct:   245 SYITGQTICVDGGLT 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2043027 AT2G29310 [Arabidopsis thaliana (taxid:3702)]

 Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
 Identities = 147/253 (58%), Positives = 189/253 (74%)

Query:    11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
             DK+WSL+GMTALVTG   GIGYAIVEELA FGA +H C   + ++++ + EWE KGF+V+
Sbjct:     2 DKRWSLQGMTALVTGAASGIGYAIVEELASFGAIIHICDISETLLSQSLSEWEKKGFQVS 61

Query:    71 GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
             GS+CD++    REKL++TVSS+FDGKLNILVNN  ++  K  TEY  E++S  +STN+E 
Sbjct:    62 GSICDVASRPDREKLMQTVSSLFDGKLNILVNNVGVIRGKPTTEYVAEDFSYHISTNLEP 121

Query:   131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
             ++H  QL+H LLKASG  SIVFMSS  G +S+   S Y+ +KGA+NQLT+NLACEWA D 
Sbjct:   122 AFHFSQLSHLLLKASGFGSIVFMSSATGVVSVQCGSIYSLTKGALNQLTRNLACEWAKDG 181

Query:   191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
             IR NAV+P  V T +S   L D+  +E   L ++TPL R+ EPNE++ LV FLCLPAASY
Sbjct:   182 IRANAVAPNVVKTPLSQSYLEDVGFKE--ALFSRTPLGRAGEPNEVASLVVFLCLPAASY 239

Query:   251 ITGQVISIDGGYT 263
             ITGQ I IDGG+T
Sbjct:   240 ITGQTICIDGGFT 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2042992 TRI "tropinone reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
 Identities = 145/253 (57%), Positives = 186/253 (73%)

Query:    11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
             DK+WSL+G+TALVTGG  GIG+AIVEELA FGA +H C   + ++N+ + EWE KGF+V+
Sbjct:     2 DKRWSLQGLTALVTGGASGIGHAIVEELAGFGAKIHVCDISKTLLNQSLSEWEKKGFQVS 61

Query:    71 GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
             GSVCD S   +RE L++TV+++FDGKLNILVNN   +  K   EY  E++S ++STN+ES
Sbjct:    62 GSVCDASNRLERETLMQTVTTIFDGKLNILVNNVGTIRTKPTIEYEAEDFSFLISTNLES 121

Query:   131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
             +YHL QL+HPLLKASGN  I F+SS AG +S    S Y  +KGA+NQL +NLACEWA D 
Sbjct:   122 AYHLSQLSHPLLKASGNGIITFISSAAGIVSFDAASIYGLTKGALNQLARNLACEWAKDG 181

Query:   191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
             IR NAV+P  + T ++ P L D    E   L ++TPL R+ EP E++ LVAFLCLPAASY
Sbjct:   182 IRANAVAPNFITTALAKPFLEDAGFNEI--LSSRTPLGRAGEPREVASLVAFLCLPAASY 239

Query:   251 ITGQVISIDGGYT 263
             ITGQ I +DGG T
Sbjct:   240 ITGQTICVDGGLT 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.3360	0.9060	0.9717	yes	no
Q8WNV7	DHRS4_PIG	1, ., 1, ., 1, ., 1, 8, 4	0.3293	0.9323	0.8888	yes	no
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.3387	0.8721	0.9430	yes	no
Q9Z8P2	FABG_CHLPN	1, ., 1, ., 1, ., 1, 0, 0	0.3227	0.9097	0.9758	yes	no
Q6GHK4	FABG_STAAR	1, ., 1, ., 1, ., 1, 0, 0	0.3387	0.8721	0.9430	yes	no
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.3387	0.8721	0.9430	yes	no
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.3387	0.8721	0.9430	yes	no
P50842	KDUD_BACSU	1, ., 1, ., 1, ., 1, 2, 7	0.3190	0.8872	0.9291	yes	no
Q9KQH7	FABG_VIBCH	1, ., 1, ., 1, ., 1, 0, 0	0.3145	0.9022	0.9836	yes	no
Q9GKX2	DHRS4_RABIT	1, ., 1, ., 1, ., 1, 8, 4	0.3306	0.9285	0.95	yes	no
P50162	TRN1_DATST	1, ., 1, ., 1, ., 2, 0, 6	0.5468	0.9548	0.9304	N/A	no
P50163	TRN2_DATST	1, ., 1, ., 1, ., 2, 3, 6	0.5454	0.9473	0.9692	N/A	no
P50164	TRN2_HYONI	1, ., 1, ., 1, ., 2, 3, 6	0.5415	0.9473	0.9692	N/A	no
P50165	TRNH_DATST	1, ., 1, ., 1, ., -	0.6352	0.9548	0.9477	N/A	no
P0A0I0	FABG_STAAW	1, ., 1, ., 1, ., 1, 0, 0	0.3387	0.8721	0.9430	yes	no
Q99LB2	DHRS4_MOUSE	1, ., 1, ., 1, ., 1, 8, 4	0.3441	0.9135	0.8709	yes	no
Q5RCF8	DHRS4_PONAB	1, ., 1, ., 1, ., 1, 8, 4	0.3429	0.8947	0.8561	yes	no
Q6G9Y2	FABG_STAAS	1, ., 1, ., 1, ., 1, 0, 0	0.3387	0.8721	0.9430	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3539	0.8834	0.9475	yes	no
Q937L4	CPNA_COMTE	1, ., 1, ., 1, ., 1, 6, 3	0.3168	0.9022	0.96	yes	no
P50199	GNO_GLUOX	1, ., 1, ., 1, ., 6, 9	0.3122	0.9172	0.9531	yes	no
Q8SPU8	DHRS4_BOVIN	1, ., 1, ., 1, ., 1, 8, 4	0.3466	0.9285	0.8853	yes	no
P94681	TSAC_COMTE	1, ., 2, ., 1, ., 6, 2	0.3188	0.9060	0.9563	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3346	0.9097	0.9201	yes	no
Q8VID1	DHRS4_RAT	1, ., 1, ., 1, ., 1, 8, 4	0.3512	0.8947	0.8530	yes	no
P43713	FABG_HAEIN	1, ., 1, ., 1, ., 1, 0, 0	0.3319	0.8909	0.9793	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3483	0.8872	0.9516	yes	no
Q9BTZ2	DHRS4_HUMAN	1, ., 1, ., 1, ., 1, 8, 4	0.3429	0.8947	0.8561	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.963
3rd Layer	1.5.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.269	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	266
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-131
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-88
cd05233	234	cd05233, SDR_c, classical (c) SDRs	1e-68
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-63
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-63
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-61
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-60
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-59
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-57
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-55
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	3e-55
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-53
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	8e-53
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	6e-52
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-50
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	5e-50
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	6e-50
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	6e-50
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-48
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-48
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-48
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	7e-46
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-45
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-45
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-45
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-44
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-44
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-44
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	4e-44
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	5e-44
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-43
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	1e-42
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-42
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	8e-42
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-41
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	8e-41
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-40
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-40
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	9e-40
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-39
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-39
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-39
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-38
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	6e-38
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-37
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-37
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-37
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-37
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-36
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	4e-36
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	5e-36
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	7e-36
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-35
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	4e-35
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	5e-35
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-35
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	6e-35
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-34
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	3e-34
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	4e-34
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-34
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	7e-34
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	9e-34
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-33
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	1e-33
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-33
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-33
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-33
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-33
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	5e-33
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	5e-33
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	6e-33
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	7e-33
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	8e-33
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	9e-33
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-32
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	1e-32
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-32
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-32
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-32
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-32
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	4e-32
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-32
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	4e-32
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	6e-32
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	7e-32
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	1e-31
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-31
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-31
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-31
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	4e-31
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	8e-31
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-30
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-30
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-30
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-30
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-30
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	4e-30
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	4e-30
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	6e-30
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-29
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-29
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-29
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-29
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	3e-29
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-29
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	6e-29
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	7e-29
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	8e-29
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	1e-28
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-28
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-28
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-28
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	4e-28
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	4e-28
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	5e-28
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	5e-28
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	5e-28
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	7e-28
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-27
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-27
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-27
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-27
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-27
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-27
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	6e-27
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	6e-27
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	8e-27
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-26
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-26
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-26
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-26
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	4e-26
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	5e-26
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	6e-26
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	7e-26
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-25
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-25
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-25
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	5e-25
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	9e-25
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-24
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-24
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-24
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-24
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-24
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	3e-24
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	4e-24
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	4e-24
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	7e-24
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	8e-24
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	9e-24
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-23
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-23
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-23
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	4e-23
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	6e-23
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	6e-23
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	7e-23
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	2e-22
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-22
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	4e-22
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	6e-22
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	8e-22
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	9e-22
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-21
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-21
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-21
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-21
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-21
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-21
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	8e-21
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	1e-20
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-20
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-20
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-20
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-20
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	7e-20
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-19
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-19
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	3e-19
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	5e-19
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	6e-19
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-18
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-18
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-18
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	6e-18
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	8e-18
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	1e-17
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-17
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	3e-17
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	4e-17
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	4e-17
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	8e-17
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	9e-17
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	1e-16
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-16
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	1e-16
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-16
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	3e-16
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	9e-16
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-15
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	2e-15
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	3e-15
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-15
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	5e-15
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-15
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	6e-15
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	9e-15
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-14
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-14
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	2e-14
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	3e-14
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	4e-14
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	1e-13
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-13
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-13
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-13
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	2e-13
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-13
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	3e-13
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-12
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-12
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	8e-12
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	1e-11
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-11
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	3e-11
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	8e-11
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-10
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	3e-10
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	9e-10
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-09
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-09
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-09
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	2e-09
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	3e-09
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	3e-09
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	4e-09
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	4e-09
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	6e-09
pfam08659	181	pfam08659, KR, KR domain	8e-09
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	2e-08
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	2e-08
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-08
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	7e-08
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	8e-08
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	3e-07
PRK05884	223	PRK05884, PRK05884, short chain dehydrogenase; Pro	3e-07
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	4e-07
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	4e-07
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	5e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-06
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	2e-06
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	3e-06
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	1e-05
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	1e-05
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	1e-05
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	3e-05
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	3e-05
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	3e-05
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-05
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	4e-05
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	4e-05
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	5e-05
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	5e-05
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	1e-04
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	1e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-04
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	2e-04
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	2e-04
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	3e-04
cd08952	480	cd08952, KR_1_SDR_x, ketoreductase (KR), subgroup	3e-04
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	0.001
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	0.001

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  371 bits (955), Expect = e-131
 Identities = 151/252 (59%), Positives = 196/252 (77%), Gaps = 2/252 (0%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           +W+L G TALVTGGT+GIGYAIVEELA  GA V+TC R+Q  ++E + EW  KGFKV GS
Sbjct: 1   RWNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGS 60

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           VCD+S   +R++L++TV+S F GKLNILVNNA   + K A +YT E+YS +MSTN E++Y
Sbjct: 61  VCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAY 120

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           HL +LAHPLLKASGN +IVF+SSVAG I++P  + Y A+KGA+NQLT++LACEWA D+IR
Sbjct: 121 HLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIR 180

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           VNAV+PW + T +  P +     +   K+I +TPL R  EP E++ LVAFLC+PAASYIT
Sbjct: 181 VNAVAPWVIATPLVEPVIQQ--KENLDKVIERTPLKRFGEPEEVAALVAFLCMPAASYIT 238

Query: 253 GQVISIDGGYTA 264
           GQ+I++DGG TA
Sbjct: 239 GQIIAVDGGLTA 250

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  263 bits (674), Expect = 1e-88
 Identities = 105/254 (41%), Positives = 155/254 (61%), Gaps = 5/254 (1%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVT 70
           +W L G TAL+TG ++GIG AI  E    GA V    RD + + +   E   E    +V 
Sbjct: 4   RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVH 63

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
           G   D+S  + R  +++ V   +DG L+ILVNNA   + K A +YT +E+  +  TN+ S
Sbjct: 64  GLAADVSDDEDRRAILDWVEDHWDG-LHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFS 122

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           ++ L + AHPLLK   +++IV + SV+G   +   + Y  +K A+ Q+T+NLA EWA D 
Sbjct: 123 AFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDG 182

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           IRVNAV+PW + T ++   L+D     Y ++I +TP+ R  EP E++  VAFLC+PAASY
Sbjct: 183 IRVNAVAPWYIRTPLTSGPLSD--PDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASY 240

Query: 251 ITGQVISIDGGYTA 264
           ITGQ I++DGG+  
Sbjct: 241 ITGQCIAVDGGFLR 254

Length = 257

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  211 bits (539), Expect = 1e-68
 Identities = 94/239 (39%), Positives = 126/239 (52%), Gaps = 5/239 (2%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG + GIG AI   LAR GA V    R++      +   E+ G        D+S  +
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEE-ALAELAAIEALGGNAVAVQADVSDEE 59

Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
             E L+E     F G+L+ILVNNA +       E T E++  V+  N+   + L + A P
Sbjct: 60  DVEALVEEALEEF-GRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 141 LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA 200
            +K  G   IV +SSVAG   +P  +AYAASK A+  LT++LA E A   IRVNAV+P  
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 201 VNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISID 259
           V+T +      +   +E   L A  PL R   P E++  V FL    ASYITGQVI +D
Sbjct: 179 VDTPMLAKLGPEEAEKE---LAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  198 bits (506), Expect = 2e-63
 Identities = 95/255 (37%), Positives = 135/255 (52%), Gaps = 16/255 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV--HTCGRDQNMINERIQEWESKGFKVTGSV 73
           L G  A+VTG + GIG AI E LA+ GA V       ++    E ++E + +G       
Sbjct: 3   LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAY-DINEEAAQELLEEIKEEGGDAIAVK 61

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+S  +  E L+E +   F GK++ILVNNA +      T+ T EE+  V+  N+     
Sbjct: 62  ADVSSEEDVENLVEQIVEKF-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVML 120

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L + A P +    +  IV +SS+ G I       Y+ASKGA+N  TK LA E A   IRV
Sbjct: 121 LTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRV 180

Query: 194 NAVSPWAVNTQI----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           NAV+P A++T++    S  D   L  +         PL R  +P EI+ +V FL    AS
Sbjct: 181 NAVAPGAIDTEMWSSFSEEDKEGLAEE--------IPLGRLGKPEEIAKVVLFLASDDAS 232

Query: 250 YITGQVISIDGGYTA 264
           YITGQ+I++DGG+T 
Sbjct: 233 YITGQIITVDGGWTC 247

Length = 247

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  198 bits (505), Expect = 3e-63
 Identities = 91/248 (36%), Positives = 130/248 (52%), Gaps = 7/248 (2%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+G TALVTG +RGIG AI   LA  GA V     ++        E  + G +    V 
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+S       LIE     F G L+ILVNNA +         + E++  V+  N+  ++++
Sbjct: 62  DVSDEAAVRALIEAAVEAF-GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNV 120

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            + A P +  +    IV +SSV+G    P  + Y+A+K  +   TK LA E A+  I VN
Sbjct: 121 VRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVN 180

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAASYITG 253
           AV+P  ++T     D+ + L +E    I K  PL R  +P E++  VAFL   AASYITG
Sbjct: 181 AVAPGFIDT-----DMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITG 235

Query: 254 QVISIDGG 261
           QVI ++GG
Sbjct: 236 QVIPVNGG 243

Length = 246

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  193 bits (493), Expect = 2e-61
 Identities = 89/251 (35%), Positives = 121/251 (48%), Gaps = 7/251 (2%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G  ALVTG  RGIG AI   LA  GA V       +      +  E+ G K      
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQV 62

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+      +  +      F G+L+ILV NA +  +    E   E++  V+  N+  ++ L
Sbjct: 63  DVRDRAALKAAVAAGVEDF-GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLL 121

Query: 135 CQLAHPLLKASGNASIVFMSSVAG-AISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            Q A P L  +G   IV  SSVAG  +  P L+ YAASK  +   T+ LA E A  +I V
Sbjct: 122 TQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITV 181

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-PLARSAEPNEISPLVAFLCLPAASYIT 252
           N+V P  V+T    P   +L   ++ + IA   PL R  EP +I+  V FL    A YIT
Sbjct: 182 NSVHPGGVDT----PMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYIT 237

Query: 253 GQVISIDGGYT 263
           GQ + +DGG T
Sbjct: 238 GQTLPVDGGAT 248

Length = 251

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  191 bits (486), Expect = 2e-60
 Identities = 97/255 (38%), Positives = 132/255 (51%), Gaps = 11/255 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEW--ESKGFKVTG 71
            L G  ALVTG + GIG AI   LAR GA V     R +    E +     E+ G +   
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 72  SVCDLSFG-DQREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVE 129
              D+S   +  E L+      F G+++ILVNNA          E T E++  V+  N+ 
Sbjct: 62  VAADVSDDEESVEALVAAAEEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
            ++ L + A PL+K      IV +SSVAG    P  +AYAASK A+  LTK LA E A  
Sbjct: 121 GAFLLTRAALPLMKK---QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPR 177

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP-AA 248
            IRVNAV+P  ++T ++   L    ++   +L A+ PL R   P E++  VAFL    AA
Sbjct: 178 GIRVNAVAPGYIDTPMT-AALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAA 236

Query: 249 SYITGQVISIDGGYT 263
           SYITGQ + +DGG  
Sbjct: 237 SYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  188 bits (480), Expect = 2e-59
 Identities = 89/248 (35%), Positives = 125/248 (50%), Gaps = 6/248 (2%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
           SL G  ALVTG  RG+G AI   LAR GA V      D+    E ++  E+ G +     
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D++     E  +      F G+++ILVNNA +   K   + + +E+  V+  N+   +H
Sbjct: 63  ADVTDKAALEAAVAAAVERF-GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFH 121

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +   P ++      IV +SSVAG    P  S YAA+K  +  LTK LA E A   I V
Sbjct: 122 LLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITV 181

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N V+P  ++T          + +      A+TPL RS  P +I+  VAFLC  A+ YITG
Sbjct: 182 NMVAPGDIDT----DMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITG 237

Query: 254 QVISIDGG 261
           QVI + GG
Sbjct: 238 QVIEVTGG 245

Length = 249

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  183 bits (468), Expect = 1e-57
 Identities = 86/253 (33%), Positives = 128/253 (50%), Gaps = 8/253 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
           SL G  ALVTG +RGIG AI E LA  GA+V       +      + E  + G K     
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+S  +  E+ ++   + F G ++ILVNNA +           E++  V+ TN+   ++
Sbjct: 62  GDVSDAESVERAVDEAKAEF-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +     +    +  I+ +SSV G +  P  + YAASK  +   TK+LA E A+  I V
Sbjct: 121 LTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITV 180

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-PLARSAEPNEISPLVAFLCLPAASYIT 252
           NAV+P  + T     D+ D L ++  + I    PL R  +P EI+  VAFL    A+YIT
Sbjct: 181 NAVAPGFIET-----DMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYIT 235

Query: 253 GQVISIDGGYTAG 265
           GQ + ++GG   G
Sbjct: 236 GQTLHVNGGMVMG 248

Length = 248

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  178 bits (453), Expect = 2e-55
 Identities = 84/251 (33%), Positives = 116/251 (46%), Gaps = 3/251 (1%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A+VTG + GIG  I    A  GA V    R++        E  + G +      D
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAAD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHL 134
           +S     E  +      F G ++ILVNNA          +    E+  + + NV+S Y  
Sbjct: 62  VSDEADVEAAVAAALERF-GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q A P ++  G  +IV ++S AG    P L  Y ASKGA+  LTK LA E   D IRVN
Sbjct: 121 TQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVN 180

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           AV+P  V T +    + +   +   K +A  PL R   P +I+    FL    AS+ITG 
Sbjct: 181 AVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGV 240

Query: 255 VISIDGGYTAG 265
            + +DGG   G
Sbjct: 241 TLVVDGGRCVG 251

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  177 bits (451), Expect = 3e-55
 Identities = 82/250 (32%), Positives = 133/250 (53%), Gaps = 3/250 (1%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+G  ALVTG +RGIG+ I   LA  GA++    R++    E  Q  E +G + T   C
Sbjct: 2   SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTC 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+S  +  +  +E +   F GK++ILVNNA ++    A E+   E+  V+  N+   + +
Sbjct: 62  DVSDEEAIKAAVEAIEEDF-GKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFV 120

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q     +   G+  I+ + S+   +  P + AYAASKG +  LTK LA EWA   I+VN
Sbjct: 121 SQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVN 180

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           A++P    T+++   + D    +   ++ + P  R  +P ++     FL   A+ Y+ GQ
Sbjct: 181 AIAPGYFATEMTEAVVADPEFNDD--ILKRIPAGRWGQPEDLVGAAVFLASDASDYVNGQ 238

Query: 255 VISIDGGYTA 264
           +I +DGG+ A
Sbjct: 239 IIFVDGGWLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  172 bits (439), Expect = 2e-53
 Identities = 88/243 (36%), Positives = 135/243 (55%), Gaps = 8/243 (3%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERI-QEWESKGFKVTGSVCDLSFG 79
           ALVTG +RGIG AI  +LA+ GA V    R      E + +E ++ G K  G VCD+S  
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           +  + ++E +     G ++ILVNNA +           E++ +V+ TN+   ++L Q   
Sbjct: 61  EDVKAVVEEIEEEL-GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVL 119

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
            ++    +  I+ +SSV G +     + YAASK  +   TK+LA E A+ +I VNAV+P 
Sbjct: 120 RIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPG 179

Query: 200 AVNTQISPPDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISI 258
            ++T     D+ D L ++   K++++ PL R   P E++  VAFL    ASYITGQVI +
Sbjct: 180 FIDT-----DMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHV 234

Query: 259 DGG 261
           DGG
Sbjct: 235 DGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  172 bits (437), Expect = 8e-53
 Identities = 95/256 (37%), Positives = 129/256 (50%), Gaps = 12/256 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G+  LVTGG  GIG AI E  A  GA VH C   +  +          G KVT +V 
Sbjct: 8   PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP--GAKVTATVA 65

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK-RATEYTLEEYSSVMSTNVESSYH 133
           D++   Q E++ +T    F G L++LVNNA +        E T E++   ++ N+   ++
Sbjct: 66  DVADPAQVERVFDTAVERFGG-LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124

Query: 134 LCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
             + A PLLKASG    I+ +SSVAG +  P  + YAASK A+  L K+LA E     IR
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184

Query: 193 VNAVSPWAVNT-------QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
           VNA+ P  V         +     L   L +   + + K  L R  EP +I+    FL  
Sbjct: 185 VNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLAS 244

Query: 246 PAASYITGQVISIDGG 261
           PAA YITGQ IS+DG 
Sbjct: 245 PAARYITGQAISVDGN 260

Length = 264

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  169 bits (430), Expect = 6e-52
 Identities = 90/253 (35%), Positives = 127/253 (50%), Gaps = 15/253 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTG 71
           L G  ALVTG +RGIG AI + LAR GASV     +       +   I+    K   V  
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
              D+S   Q  +L +     F G ++ILVNNA +++ K   E + EE+  + + N + +
Sbjct: 61  ---DVSDPSQVARLFDAAEKAF-GGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGA 116

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           + + Q A   L+  G   I+ +SS   A   P   AYA SK A+   T+ LA E     I
Sbjct: 117 FFVLQEAAKRLRDGG--RIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGI 174

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAASY 250
            VNAV+P  V+T            +E V+  AK +PL R  EP +I+P+VAFL  P   +
Sbjct: 175 TVNAVAPGPVDT----DMFYAGKTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLASPDGRW 230

Query: 251 ITGQVISIDGGYT 263
           + GQVI  +GGY 
Sbjct: 231 VNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  165 bits (420), Expect = 2e-50
 Identities = 80/250 (32%), Positives = 126/250 (50%), Gaps = 4/250 (1%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L G  ALVTG  RG+G A  E LA  GA+V           E     E+ G +      
Sbjct: 4   NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAA 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL+     ++  +  ++   G L+ LVNNA +   K ATE  ++ + +VM+ NV  ++ +
Sbjct: 64  DLADPASVQRFFDAAAAAL-GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLM 122

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            + A P L+ SG   IV ++S       P+L AY ASKGA+  +T++LA E     I VN
Sbjct: 123 LRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVN 182

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           A++P    T+ +     D     Y+K      L R   P++++  V FL   AA ++TGQ
Sbjct: 183 AIAPGLTATEATAYVPADERHAYYLKGR---ALERLQVPDDVAGAVLFLLSDAARFVTGQ 239

Query: 255 VISIDGGYTA 264
           ++ ++GG+  
Sbjct: 240 LLPVNGGFVM 249

Length = 250

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  164 bits (417), Expect = 5e-50
 Identities = 96/254 (37%), Positives = 138/254 (54%), Gaps = 10/254 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSV 73
           SL+G  A+VTGG+RGIG AI   LA  GA V           E+ +E   K G K     
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CD+S  +  EK  + +   F GK++IL+ NA + V K A +YT E+++ V+  N+   ++
Sbjct: 65  CDVSSQESVEKTFKQIQKDF-GKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFN 123

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAI-SIPRLSA-YAASKGAINQLTKNLACEWATDSI 191
             Q A  + K  G  S++  +S++G I + P+  A Y ASK A+  L K+LA EWA   I
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFI 183

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKL-IAKTPLARSAEPNEISPLVAFLCLPAASY 250
           RVN++SP  ++T     DL D + +E  K   +  PL R A P E+     +L   A+SY
Sbjct: 184 RVNSISPGYIDT-----DLTDFVDKELRKKWESYIPLKRIALPEELVGAYLYLASDASSY 238

Query: 251 ITGQVISIDGGYTA 264
            TG  + IDGGYT 
Sbjct: 239 TTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  163 bits (416), Expect = 6e-50
 Identities = 89/247 (36%), Positives = 138/247 (55%), Gaps = 15/247 (6%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            ALVTG +RGIG AI   LA  GA V    R +    E ++E ++ G        D+S  
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61

Query: 80  DQREKLIETVSSVFDGKLNILVNNAAL---VVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           +  E L+E V + F G ++ILVNNA +    ++ R +E   E++ +V++ N+   +++ Q
Sbjct: 62  EAVEALVEKVEAEF-GPVDILVNNAGITRDNLLMRMSE---EDWDAVINVNLTGVFNVTQ 117

Query: 137 -LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
            +   ++K   +  I+ +SSV G I  P  + YAASK  +   TK+LA E A+  I VNA
Sbjct: 118 AVIRAMIKR-RSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176

Query: 196 VSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           V+P  ++T     D+ D L ++   K++ + PL R   P E++  VAFL    ASYITGQ
Sbjct: 177 VAPGFIDT-----DMTDALPEKVKEKILKQIPLGRLGTPEEVANAVAFLASDDASYITGQ 231

Query: 255 VISIDGG 261
           V+ ++GG
Sbjct: 232 VLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  164 bits (416), Expect = 6e-50
 Identities = 89/254 (35%), Positives = 129/254 (50%), Gaps = 12/254 (4%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHT----CGRDQNMINERIQEWESKGFKV 69
            SL     L+TGG+ G+G AI   LA  GA V        R +   +      E+ G K 
Sbjct: 2   ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKA 61

Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
            G   D+         ++     F G+L+ILVNNA +       E ++EE+  V+  N++
Sbjct: 62  LGLAFDVRDFAATRAALDAGVEEF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLD 120

Query: 130 SSYHLCQ-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
             +++ Q    P+++A     IV ++SVAG         YAASK  +  LTK LA E A 
Sbjct: 121 GFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAP 180

Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
             I VNAV+P A+NT    P  ++    E++      P+ R  EP+E++ LVAFL   AA
Sbjct: 181 RGITVNAVAPGAINT----PMADNAAPTEHLLNPV--PVQRLGEPDEVAALVAFLVSDAA 234

Query: 249 SYITGQVISIDGGY 262
           SY+TGQVI +DGG+
Sbjct: 235 SYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  160 bits (406), Expect = 2e-48
 Identities = 88/254 (34%), Positives = 131/254 (51%), Gaps = 11/254 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L+G  A+VTGG RG+G A    L   GA V               E    G        
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAEL---GDAARFFHL 58

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  D    +++T    F G+L++LVNNA ++        TLEE+  ++  N+   +  
Sbjct: 59  DVTDEDGWTAVVDTAREAF-GRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLG 117

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT--DSIR 192
            +   P +K +G  SI+ MSS+ G +  P L+AY ASKGA+  LTK+ A E AT    IR
Sbjct: 118 TRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIR 177

Query: 193 VNAVSPWAVNTQISPPDLNDLLV-QEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           VN+V P  + T    P  ++LL+ Q  +     TP+ R+ EP+EI+  V +L    +S++
Sbjct: 178 VNSVHPGYIYT----PMTDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVYLASDESSFV 233

Query: 252 TGQVISIDGGYTAG 265
           TG  + +DGGYTAG
Sbjct: 234 TGSELVVDGGYTAG 247

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  160 bits (407), Expect = 2e-48
 Identities = 86/254 (33%), Positives = 134/254 (52%), Gaps = 7/254 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF---KVTGS 72
           L G  A++TG + GIG       AR GA +   GRD   + E  Q     G    K+   
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           V DL+  + ++++I T  + F G+L+ILVNNA ++      +  +EEY  VM+ N+ +  
Sbjct: 61  VADLTEEEGQDRIISTTLAKF-GRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVI 119

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           +L +LA P L  +    IV +SSVAG  S P +  Y  SK A++Q T+  A E A   +R
Sbjct: 120 YLTKLAVPHLIKT-KGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVR 178

Query: 193 VNAVSPWAVNTQI-SPPDLNDLLVQEYVKLIAKT-PLARSAEPNEISPLVAFLCLPAASY 250
           VN+VSP  + T       + +    +++    +T PL R    +E++  +AFL   A+S+
Sbjct: 179 VNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDASSF 238

Query: 251 ITGQVISIDGGYTA 264
           ITGQ++ +DGG   
Sbjct: 239 ITGQLLPVDGGRHL 252

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  159 bits (405), Expect = 4e-48
 Identities = 83/253 (32%), Positives = 123/253 (48%), Gaps = 8/253 (3%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G  ALVT  + GIG AI   LAR GA V  C R++  +     E  + G  V   V DL+
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
             +  ++L+E     F G+++ILVNNA         E T E++       + S   + + 
Sbjct: 61  DPEDIDRLVEKAGDAF-GRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119

Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
             P +K  G   IV +SS+      P L     ++  +  L K L+ E A D + VN+V 
Sbjct: 120 VLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVL 179

Query: 198 PWAVNTQ------ISPPDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAASY 250
           P  ++T+       +  +   + V+E  K +A   PL R  +P E++ L+AFL    ASY
Sbjct: 180 PGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEKASY 239

Query: 251 ITGQVISIDGGYT 263
           ITGQ I +DGG T
Sbjct: 240 ITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  154 bits (390), Expect = 7e-46
 Identities = 89/255 (34%), Positives = 134/255 (52%), Gaps = 11/255 (4%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM--INERIQEWESKGFK 68
           D  + L G  A+VTGG  GIG+AI E  A  GA V    R +++  +  ++    +KG  
Sbjct: 8   DLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGL- 66

Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
               VCD+S     E  +  V S F G+++ILVN+A + ++  A + + E++   +  N+
Sbjct: 67  ----VCDVSDSQSVEAAVAAVISAF-GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINL 121

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           + S+ + Q     + A+G   IV ++S AG +++ R  AY ASK  +  +TK LA EW  
Sbjct: 122 KGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGP 181

Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
             I VNA+SP  V T++          +   KLI   P  R A P EI+    FL   AA
Sbjct: 182 YGITVNAISPTVVLTELGKKAWAGEKGERAKKLI---PAGRFAYPEEIAAAALFLASDAA 238

Query: 249 SYITGQVISIDGGYT 263
           + ITG+ + IDGGYT
Sbjct: 239 AMITGENLVIDGGYT 253

Length = 255

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  153 bits (389), Expect = 1e-45
 Identities = 77/253 (30%), Positives = 123/253 (48%), Gaps = 14/253 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSVC 74
           L+G  A +TGG  GIG AI +  A  GASV   GR   ++    +E  S    +     C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+   +  E  ++     F GK++IL+NNAA   +  A   +   + +V+  ++  +++ 
Sbjct: 61  DVRDPEAVEAAVDETLKEF-GKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNT 119

Query: 135 CQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            +     L++A    SI+ +S+       P     AA+K  ++ LT++LA EW    IRV
Sbjct: 120 TKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYGIRV 179

Query: 194 NAVSPWAVNTQ-----ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           NA++P  + T      ++P        +   K+I + PL R   P EI+ L  FL   AA
Sbjct: 180 NAIAPGPIPTTEGMERLAPSG------KSEKKMIERVPLGRLGTPEEIANLALFLLSDAA 233

Query: 249 SYITGQVISIDGG 261
           SYI G  + +DGG
Sbjct: 234 SYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  154 bits (391), Expect = 1e-45
 Identities = 88/268 (32%), Positives = 141/268 (52%), Gaps = 18/268 (6%)

Query: 7   PVFGDKKW----SLRGMTALVTGGTRGIGYAIVEELARFGASVHTC----GRDQNMINER 58
           P F    +     L+G  AL+TGG  GIG A+    A+ GA +         D N   +R
Sbjct: 31  PQFEAPNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQR 90

Query: 59  IQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEY-TL 117
           +++   K   + G V D +F   ++ + ETV  +  G+L+ILVNNAA    +++ E  T 
Sbjct: 91  VEKEGVKCLLIPGDVSDEAFC--KDAVEETVREL--GRLDILVNNAAFQYPQQSLEDITA 146

Query: 118 EEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ 177
           E+      TN+ S +H+ + A P LK  G ++I+   S+ G      L  Y+A+KGAI+ 
Sbjct: 147 EQLDKTFKTNIYSYFHMTKAALPHLK-QG-SAIINTGSITGYEGNETLIDYSATKGAIHA 204

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEIS 237
            T++LA       IRVNAV+P  + T + P D ++   ++  +  + TP+ R  +P E++
Sbjct: 205 FTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDE---EKVSQFGSNTPMQRPGQPEELA 261

Query: 238 PLVAFLCLPAASYITGQVISIDGGYTAG 265
           P   FL  P +SYITGQ++ ++GG    
Sbjct: 262 PAYVFLASPDSSYITGQMLHVNGGVIVN 289

Length = 290

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  153 bits (387), Expect = 2e-45
 Identities = 86/247 (34%), Positives = 132/247 (53%), Gaps = 4/247 (1%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L    ALVT  T GIG AI   LA+ GA V    R Q  ++  +   + +G  VTG+VC 
Sbjct: 8   LANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCH 67

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHL 134
           +   + RE+L+ T  ++  G ++ILV+NAA+        + T E +  ++  NV+++  +
Sbjct: 68  VGKAEDRERLVATAVNLH-GGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATALM 126

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +   P ++  G  S+V +SSVA     P L  Y  SK A+  LTKNLA E A  +IRVN
Sbjct: 127 TKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRNIRVN 186

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
            ++P  + T  S     D  V+E +K      + R  +P + + +V+FLC   ASYITG+
Sbjct: 187 CLAPGLIKTSFSSALWMDKAVEESMK--ETLRIRRLGQPEDCAGIVSFLCSEDASYITGE 244

Query: 255 VISIDGG 261
            + + GG
Sbjct: 245 TVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  150 bits (382), Expect = 1e-44
 Identities = 85/254 (33%), Positives = 126/254 (49%), Gaps = 10/254 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G TALVTGG+RG+G  I E L   GA V    R    + E     E+ G        D
Sbjct: 10  LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAAD 69

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++     E+L E     F G ++ILVNNA       A ++ +E +  VM+ NV   + L 
Sbjct: 70  VADEADIERLAEETLERF-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLS 128

Query: 136 Q-LAHPLLKASGNASIVFMSSVAG-AISIPRLS---AYAASKGAINQLTKNLACEWATDS 190
           Q +A   +   G   I+ ++SVAG   + P +    AY  SKGA+   T+ LA EW    
Sbjct: 129 QAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHG 188

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           IRVNA++P    T+++       L +    L+A TPL R  +  ++      L   A+ +
Sbjct: 189 IRVNAIAPGFFPTKMT----RGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKH 244

Query: 251 ITGQVISIDGGYTA 264
           ITGQ++++DGG +A
Sbjct: 245 ITGQILAVDGGVSA 258

Length = 259

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  150 bits (380), Expect = 1e-44
 Identities = 81/242 (33%), Positives = 127/242 (52%), Gaps = 5/242 (2%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           A+VTGG  GIG AI   LA+ GASV                 +  G +  G  C+++   
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61

Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKR-ATEYTLEEYSSVMSTNVESSYHLCQLAH 139
             E +++   S F G + ILVNNA     K      T E++      N+ S++ L QL  
Sbjct: 62  DLEAVVKATVSQF-GGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P ++ +G  +I+ +SS++      R++AY +SK A+N +T+NLA +     IRVNAV+P 
Sbjct: 121 PHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPG 180

Query: 200 AVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISID 259
           AV T      L   + +    ++  TPL R  EP +I+    FLC PA+++++GQV+++ 
Sbjct: 181 AVKTDALASVLTPEIER---AMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQVLTVS 237

Query: 260 GG 261
           GG
Sbjct: 238 GG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  149 bits (379), Expect = 3e-44
 Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 3/252 (1%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           ++SL G  ALVTG  RG+G+ I   LA  GA V   GR+   +   +    + G      
Sbjct: 6   RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEAL 65

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             D++  +        + +   G+L+ILVNN      +   E       +++ T++ +  
Sbjct: 66  AFDIADEEAVAAAFARIDAEH-GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPI 124

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
            L +LA   +K  G   I+ ++S+AG ++    + Y A+K  +  L + LA E+    I 
Sbjct: 125 LLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGIT 184

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            NA++P    T+ +     D  V  ++    +TPL R   P EI+    FL  PAASY+ 
Sbjct: 185 SNAIAPGYFATETNAAMAADPAVGPWLA--QRTPLGRWGRPEEIAGAAVFLASPAASYVN 242

Query: 253 GQVISIDGGYTA 264
           G V+++DGGY+ 
Sbjct: 243 GHVLAVDGGYSV 254

Length = 256

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  149 bits (377), Expect = 4e-44
 Identities = 87/246 (35%), Positives = 124/246 (50%), Gaps = 8/246 (3%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           ALVTGG+RGIG AI   LA  GA V     + ++   E   E E  G K      D+S  
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
              E++   V   F G+L++LV+NAA    +  +E T   + + M+TN+++  H  Q A 
Sbjct: 61  QDVEEMFAAVKERF-GRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAA 119

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
            L++  G   IV +SS+    ++P   A   +K A+  L + LA E     IRVNAVSP 
Sbjct: 120 KLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSPG 179

Query: 200 AVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
            ++T      P+  DLL        A TP  R   P +++  V FLC  AA  ITGQ + 
Sbjct: 180 VIDTDALAHFPNREDLLEA----AAANTPAGRVGTPQDVADAVGFLCSDAARMITGQTLV 235

Query: 258 IDGGYT 263
           +DGG +
Sbjct: 236 VDGGLS 241

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  149 bits (377), Expect = 5e-44
 Identities = 81/255 (31%), Positives = 125/255 (49%), Gaps = 9/255 (3%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G TALVTG   GIG AI   LA  GA+V      +       +     G  V     D++
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
             D+   +I   ++ F G L+ILVNNA +  +    E+  E++  +++  + S++H  + 
Sbjct: 61  KEDEIADMIAAAAAEF-GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119

Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
           A P +K  G   I+ ++S  G ++ P  SAY A+K  +  LTK LA E A   I VNA+ 
Sbjct: 120 ALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAIC 179

Query: 198 PWAVNTQISPPDLNDL-----LVQEYVK---LIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           P  V T +    + D      + +E V    ++   P  R    +E++    +L   AA+
Sbjct: 180 PGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDAAA 239

Query: 250 YITGQVISIDGGYTA 264
            ITGQ I +DGG+TA
Sbjct: 240 QITGQAIVLDGGWTA 254

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  147 bits (373), Expect = 2e-43
 Identities = 92/251 (36%), Positives = 134/251 (53%), Gaps = 7/251 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVC 74
           L+G  ALVTG + GIG AI   LA  GA+V    R  ++   E ++E ++ G K      
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+S  +    L ++    F G L+ILVNNA L     + E TLE+++ V+  N+   + L
Sbjct: 61  DVSKEEDVVALFQSAIKEF-GTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQF-L 118

Query: 135 C--QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           C  +      K+     I+ MSSV   I  P    YAASKG +  +TK LA E+A   IR
Sbjct: 119 CAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIR 178

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           VNA++P A+NT I+    +D   ++   L++  P+ R  EP EI+   A+L    ASY+T
Sbjct: 179 VNAIAPGAINTPINAEAWDD--PEQRADLLSLIPMGRIGEPEEIAAAAAWLASDEASYVT 236

Query: 253 GQVISIDGGYT 263
           G  + +DGG T
Sbjct: 237 GTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  145 bits (369), Expect = 1e-42
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 15/260 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+G  ALVTG   GIG  I   LA+ GA V     +        +  +  G K  G   D
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  +     I+     F G ++ILVNNA +  +    ++  E++  +++  ++ ++   
Sbjct: 62  VTDEEAINAGIDYAVETF-GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTT 120

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A P++KA G   I+ M+SV G +     +AY ++K  +  LTK +A E AT  + VNA
Sbjct: 121 KAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNA 180

Query: 196 VSPWAVNT-----QISPPDLNDLL------VQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
           + P  V+T     QI  PDL          V E V L+   P  R     EI+    FL 
Sbjct: 181 ICPGYVDTPLVRKQI--PDLAKERGISEEEVLEDV-LLPLVPQKRFTTVEEIADYALFLA 237

Query: 245 LPAASYITGQVISIDGGYTA 264
             AA  +TGQ   +DGG+TA
Sbjct: 238 SFAAKGVTGQAWVVDGGWTA 257

Length = 258

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  145 bits (367), Expect = 2e-42
 Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 11/254 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G  ALVTGG  GIG A     AR GA V    RD     E +      G +     CD
Sbjct: 5   FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACD 64

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK-RATEYTLEEYSSVMSTNVESSYHL 134
           ++   + + L+E   + + G+L+   NNA + + + R  E +  E+ ++M  NV+  + L
Sbjct: 65  VTRDAEVKALVEQTIAAY-GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVW-L 122

Query: 135 C---QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           C   Q+  PL+ A G  +IV  +SVAG  + P++S YAASK A+  LTK+ A E+A   I
Sbjct: 123 CMKYQI--PLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGI 180

Query: 192 RVNAVSPWAVNTQ-ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           RVNAV P  ++T         D    E+    A  P+ R  +  E++  V +LC   AS+
Sbjct: 181 RVNAVCPAVIDTDMFRRAYEADPRKAEF--AAAMHPVGRIGKVEEVASAVLYLCSDGASF 238

Query: 251 ITGQVISIDGGYTA 264
            TG  + +DGG TA
Sbjct: 239 TTGHALMVDGGATA 252

Length = 253

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  143 bits (362), Expect = 8e-42
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 7/247 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A++TG   GIG  I    A  GASV     + +  N  + E +  G +     CD
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++   +   L +   S   GK++ILVNNA     K   +  + ++      NV S +HL 
Sbjct: 69  ITSEQELSALADFALSKL-GKVDILVNNAGGGGPK-PFDMPMADFRRAYELNVFSFFHLS 126

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           QL  P ++ +G   I+ ++S+A       +++YA+SK A + L +N+A +    +IRVN 
Sbjct: 127 QLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNG 186

Query: 196 VSPWAVNTQISPPDLNDLLVQEY-VKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           ++P A+ T      L  ++  E   K++  TP+ R  +P +I+    FLC PAAS+++GQ
Sbjct: 187 IAPGAILTDA----LKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQ 242

Query: 255 VISIDGG 261
           ++++ GG
Sbjct: 243 ILTVSGG 249

Length = 255

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  148 bits (374), Expect = 3e-41
 Identities = 89/253 (35%), Positives = 133/253 (52%), Gaps = 8/253 (3%)

Query: 17  RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           +    LVTG   GIG A  +  AR G  V    R+     ER     S G        D+
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERAD---SLGPDHHALAMDV 60

Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALV--VMKRATEYTLEEYSSVMSTNVESSYHL 134
           S   Q  +  E +   F G++++LVNNA +    M    + TLEE++ + + N+  +Y +
Sbjct: 61  SDEAQIREGFEQLHREF-GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLV 119

Query: 135 CQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A  L+   G+ A+IV ++S AG +++P+ +AY+ASK A+  LT++LACEWA   IRV
Sbjct: 120 AREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRV 179

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NAV P  V TQ+   +L      +   + ++ PL R   P EI+  V FL    ASYITG
Sbjct: 180 NAVLPGYVRTQMV-AELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITG 238

Query: 254 QVISIDGGYTAGN 266
             + +DGG+T   
Sbjct: 239 STLVVDGGWTVYG 251

Length = 520

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  140 bits (356), Expect = 8e-41
 Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 17/250 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSV 73
            L G   LVTGGTRGIG  I       GA+V  CGR     ++ R  E+ +         
Sbjct: 3   DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHA--------- 53

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+   DQ   L++ +     G+L++LVNNA       A E +   +  ++  N+ +   
Sbjct: 54  ADVRDPDQVAALVDAIVERH-GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLL 112

Query: 134 LCQLAHPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           + Q A+ +++   G  SIV + SV+G    P  +AY A+K  +  LT++LA EWA   +R
Sbjct: 113 VAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VR 171

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-PLARSAEPNEISPLVAFLCLPAASYI 251
           VNAV    V T+ S     D    E +  +A T PL R A P +I+    FL    ASY+
Sbjct: 172 VNAVVVGLVRTEQSELHYGD---AEGIAAVAATVPLGRLATPADIAWACLFLASDLASYV 228

Query: 252 TGQVISIDGG 261
           +G  + + GG
Sbjct: 229 SGANLEVHGG 238

Length = 252

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  140 bits (355), Expect = 1e-40
 Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 10/251 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL G  A+VTGG  G+G      LA+ GA +       N  +E  +  E +G KVT    
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNW-DETRRLIEKEGRKVTFVQV 70

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL+  +  EK+++     F GK++ILVNNA  +      EY  E++++VM  N+ S YHL
Sbjct: 71  DLTKPESAEKVVKEALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHL 129

Query: 135 CQLAHPLLKASGNASIV---FMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
            Q    ++   G+  I+    M S  G   +P   AY ASK  +  LTK  A E A  +I
Sbjct: 130 SQAVAKVMAKQGSGKIINIASMLSFQGGKFVP---AYTASKHGVAGLTKAFANELAAYNI 186

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           +VNA++P  + T  + P   D       +++ + P  R  EP+++     FL   A+ Y+
Sbjct: 187 QVNAIAPGYIKTANTAPIRAD--KNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYV 244

Query: 252 TGQVISIDGGY 262
            G ++++DGG+
Sbjct: 245 NGHILAVDGGW 255

Length = 258

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  139 bits (351), Expect = 3e-40
 Identities = 84/255 (32%), Positives = 129/255 (50%), Gaps = 13/255 (5%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           +S+ G   LVTGG+RGIG  I +     GA V    R      +  +E  + G +     
Sbjct: 2   FSVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIP 60

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DLS  +  E L+  V+   D +L++LVNNA          +    +  VM  NV+S + 
Sbjct: 61  ADLSSEEGIEALVARVAERSD-RLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFF 119

Query: 134 LCQLAHPLLKASGN----ASIVFMSSVAGAISIPRLS--AYAASKGAINQLTKNLACEWA 187
           L Q   PLL+A+      A ++ + S+AG I +  L   +Y ASK A++QLT+ LA E A
Sbjct: 120 LTQALLPLLRAAATAENPARVINIGSIAG-IVVSGLENYSYGASKAAVHQLTRKLAKELA 178

Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-PLARSAEPNEISPLVAFLCLP 246
            + I VNA++P    ++++   LND      ++   K+ PL R   P +++ L   L   
Sbjct: 179 GEHITVNAIAPGRFPSKMTAFLLND---PAALEAEEKSIPLGRWGRPEDMAGLAIMLASR 235

Query: 247 AASYITGQVISIDGG 261
           A +Y+TG VI +DGG
Sbjct: 236 AGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  138 bits (349), Expect = 9e-40
 Identities = 83/256 (32%), Positives = 116/256 (45%), Gaps = 20/256 (7%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-MINERIQEWESKGFKVTGSVCDLSF 78
            A++TG  +GIG AI E LA  G ++     +        IQE    G+       D++ 
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
            D  E LI+     F G  +++VNNA +  +      T E+   V + NV       Q A
Sbjct: 64  KDDVEALIDQAVEKF-GSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122

Query: 139 H-PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
                K      I+  SS+AG    P L AY+ASK A+  LT+  A E A   I VNA +
Sbjct: 123 ARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYA 182

Query: 198 PWAVNTQISPPDLNDLLV------------QEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
           P  V T++   D  D  V             E+   I   PL R +EP +++ LV+FL  
Sbjct: 183 PGIVKTEMW--DYIDEEVGEIAGKPEGEGFAEFSSSI---PLGRLSEPEDVAGLVSFLAS 237

Query: 246 PAASYITGQVISIDGG 261
             + YITGQ I +DGG
Sbjct: 238 EDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  138 bits (349), Expect = 1e-39
 Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 11/258 (4%)

Query: 17  RGMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESK-GFKVTGSVC 74
           +G  ALVTG T GIG  I   LA  GA++   G  D   I        +K G KV     
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DLS     E ++      F G ++ILVNNA +  +    ++  E++ ++++ N+ + +H 
Sbjct: 61  DLSKPAAIEDMVAYAQRQF-GGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHT 119

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +LA P +K  G   I+ ++SV G ++    SAY A+K  +  LTK +A E A   +  N
Sbjct: 120 TRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCN 179

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVK--------LIAKTPLARSAEPNEISPLVAFLCLP 246
           A+ P  V T +    ++ L  +  V         L+ K P  +   P ++     FL   
Sbjct: 180 AICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLASD 239

Query: 247 AASYITGQVISIDGGYTA 264
           AAS ITG  +S+DGG+TA
Sbjct: 240 AASQITGTAVSVDGGWTA 257

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  137 bits (348), Expect = 2e-39
 Identities = 72/262 (27%), Positives = 141/262 (53%), Gaps = 9/262 (3%)

Query: 9   FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK 68
             +  +SL+G  AL+TG + GIG+AI +  A+ GA++     +Q ++++ +  +   G +
Sbjct: 1   MSENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIE 60

Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
             G VCD++  D  + ++  +     G ++ILVNNA ++      E + E++  V+  ++
Sbjct: 61  AHGYVCDVTDEDGVQAMVSQIEKEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDL 119

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            + + + +   P +   G+  I+ + S+   +    +SAYAA+KG +  LTKN+A E+  
Sbjct: 120 NAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGE 179

Query: 189 DSIRVNAVSPWAVNT-QISP-----PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
            +I+ N + P  + T Q +P      D +     +++  IAKTP AR  +P +++    F
Sbjct: 180 ANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFI--IAKTPAARWGDPEDLAGPAVF 237

Query: 243 LCLPAASYITGQVISIDGGYTA 264
           L   A++++ G ++ +DGG  A
Sbjct: 238 LASDASNFVNGHILYVDGGILA 259

Length = 265

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  136 bits (344), Expect = 3e-39
 Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 13/248 (5%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G + LVTG + GIG A    LA+ GA V    R+   ++    E   +  ++     D+ 
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL-----DVG 63

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ- 136
             D   +     +  FDG    LVN A +  ++ A + T E +  VM+ N   +  + + 
Sbjct: 64  -DDAAIRAALAAAGAFDG----LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARH 118

Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
           +A  ++ A    SIV +SS A  + +P   AY ASK A++ +T+ L  E     IRVN+V
Sbjct: 119 VARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSV 178

Query: 197 SPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI 256
           +P    T ++    +D   Q+   ++A  PL R AE ++++  + FL   AAS ++G  +
Sbjct: 179 NPTVTLTPMAAEAWSD--PQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSL 236

Query: 257 SIDGGYTA 264
            +DGGYTA
Sbjct: 237 PVDGGYTA 244

Length = 245

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  133 bits (337), Expect = 4e-38
 Identities = 91/254 (35%), Positives = 130/254 (51%), Gaps = 20/254 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV-- 73
            +G  AL+TGGTRGIG AI E   R GA V         +     E E+K  +  G    
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKV--------AVLYNSAENEAKELREKGVFTI 56

Query: 74  -CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
            CD+   DQ +K  E V   F G++++LVNNA ++ +    E+  E+Y+ ++  N+  + 
Sbjct: 57  KCDVGNRDQVKKSKEVVEKEF-GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAI 115

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAG-AISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           +      PLLK S N +IV ++S AG   +    + YA +K  I  LT+ LA E     I
Sbjct: 116 YTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGI 175

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKL----IAKTPLARSAEPNEISPLVAFLCLPA 247
           RVNAV+P  V T ++    +    +E  KL      KT L  + +P +I+ +V FL    
Sbjct: 176 RVNAVAPGWVETDMTLSGKSQ---EEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDD 232

Query: 248 ASYITGQVISIDGG 261
           A YITGQVI  DGG
Sbjct: 233 ARYITGQVIVADGG 246

Length = 255

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  133 bits (338), Expect = 6e-38
 Identities = 92/263 (34%), Positives = 135/263 (51%), Gaps = 13/263 (4%)

Query: 6   EPVFGDKKW----SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQ 60
            P FG+K +     L+G  AL+TGG  GIG A+    AR GA V      ++    E  +
Sbjct: 10  LPDFGEKSYKGSGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETK 69

Query: 61  EW-ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEY-TLE 118
           +  E +G K      DL        L++ V   F GKL+ILVNNAA    + + E  T E
Sbjct: 70  KLIEEEGRKCLLIPGDLGDESFCRDLVKEVVKEF-GKLDILVNNAAYQHPQESIEDITTE 128

Query: 119 EYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL 178
           +      TN+ S ++L + A P LK    +SI+  +SV      P L  YAA+KGAI   
Sbjct: 129 QLEKTFRTNIFSMFYLTKAALPHLKKG--SSIINTTSVTAYKGSPHLLDYAATKGAIVAF 186

Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISP 238
           T+ L+ + A   IRVNAV+P  + T + P    +  V E+     + P+ R+ +P E++P
Sbjct: 187 TRGLSLQLAEKGIRVNAVAPGPIWTPLIPSSFPEEKVSEFGS---QVPMGRAGQPAEVAP 243

Query: 239 LVAFLCLPAASYITGQVISIDGG 261
              FL    +SY+TGQV+ ++GG
Sbjct: 244 AYVFLASQDSSYVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  132 bits (334), Expect = 1e-37
 Identities = 84/253 (33%), Positives = 122/253 (48%), Gaps = 15/253 (5%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            ALVTGG +GIG  I E LA+ G +V     ++    E  +E    G K      D+S  
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           DQ    I+  +  F G  +++VNNA +  +    E T EE   V + NV+      Q A 
Sbjct: 62  DQVFSAIDQAAEKF-GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120

Query: 140 PLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
              K  G+   I+  +S+AG    P LSAY+++K A+  LT+  A E A   I VNA  P
Sbjct: 121 RQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCP 180

Query: 199 WAVNTQI------SPPDLNDLLV----QEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
             V T +         ++    +    +E+   IA   L R +EP +++ LV+FL    +
Sbjct: 181 GIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIA---LGRPSEPEDVAGLVSFLASEDS 237

Query: 249 SYITGQVISIDGG 261
            YITGQ I +DGG
Sbjct: 238 DYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  132 bits (334), Expect = 1e-37
 Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 4/252 (1%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A+VTG   GIG A  +  AR GA V    RD            + G +      D
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQGD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +   +  E L++ V++ + G+L++LVNNA              ++ +VM  NV   +   
Sbjct: 62  VGSAEAVEALVDFVAARW-GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA 120

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A P+++  G  SIV  +S          +AY ASKGAI  LT+ +A + ATD IRVNA
Sbjct: 121 KYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNA 180

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           V+P  ++T             E ++  L A+ P+ R     E++    FL    +S+ TG
Sbjct: 181 VAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATG 240

Query: 254 QVISIDGGYTAG 265
             + +DGG+ A 
Sbjct: 241 TTLVVDGGWLAA 252

Length = 252

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  132 bits (335), Expect = 1e-37
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 38/266 (14%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-------INERIQEWESKGF 67
            L G  A+VTGG   IG A+   L   GA V     D +        + ER +       
Sbjct: 3   GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIA---- 58

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
                  D++     E+ + TV + F G+++ILVN A   +       +  ++ + +  N
Sbjct: 59  ------TDITDDAAIERAVATVVARF-GRVDILVNLACTYL-DDGLASSRADWLAALDVN 110

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           + S+  L Q AHP L   G A IV  +S++   +      Y ASK AI QLT+++A + A
Sbjct: 111 LVSAAMLAQAAHPHLARGGGA-IVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLA 169

Query: 188 TDSIRVNAVSP-WAVNTQISPPDLNDLLVQEYVKLIAKT--------PLARSAEPNEISP 238
            D IRVN+VSP W  +  +      D          AK          L R  +P E++ 
Sbjct: 170 PDGIRVNSVSPGWTWSRVMDELSGGD---------RAKADRVAAPFHLLGRVGDPEEVAQ 220

Query: 239 LVAFLCLPAASYITGQVISIDGGYTA 264
           +VAFLC  AAS++TG   ++DGGY+A
Sbjct: 221 VVAFLCSDAASFVTGADYAVDGGYSA 246

Length = 261

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  132 bits (333), Expect = 2e-37
 Identities = 85/263 (32%), Positives = 116/263 (44%), Gaps = 25/263 (9%)

Query: 15  SLRGMTALVTGGTR--GIGYAIVEELARFGASV---------HTCGRDQNMINERI--QE 61
            L    ALVTG +R  GIG A+   LA  G  +          T     +     +  +E
Sbjct: 2   PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61

Query: 62  WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS 121
            ES G +      DLS      ++   VS    G  +IL+NNAA     R  E T E+  
Sbjct: 62  IESYGVRCEHMEIDLSQPYAPNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLD 120

Query: 122 SVMSTNVESSYHLCQL--AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT 179
              + NV ++  L          KA G   I+ ++S      +P   AYAA+KGAI   T
Sbjct: 121 KHYAVNVRATMLLSSAFAKQYDGKAGG--RIINLTSGQSLGPMPDELAYAATKGAIEAFT 178

Query: 180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL 239
           K+LA E A   I VNAV+P   +T     +L          L+ K P  R  EP + + L
Sbjct: 179 KSLAPELAEKGITVNAVNPGPTDTGWITEEL-------KHHLVPKFPQGRVGEPVDAARL 231

Query: 240 VAFLCLPAASYITGQVISIDGGY 262
           +AFL    A +ITGQVI  +GG+
Sbjct: 232 IAFLVSEEAKWITGQVIHSEGGF 254

Length = 256

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  129 bits (326), Expect = 3e-36
 Identities = 86/256 (33%), Positives = 128/256 (50%), Gaps = 13/256 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G TAL+TG  +GIG  I    AR GA++         I +   E   +G + T  V D
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVAD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +         I+       G+++ILVNNA +  +    + + E+    +  N++  +++ 
Sbjct: 63  VRDPASVAAAIKRAKEKE-GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVT 121

Query: 136 QLAHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           +   P + A  +  IV MSSV G + + P  +AYA +K AI  LTK+LA E+A   IRVN
Sbjct: 122 KAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVN 181

Query: 195 AVSPWAVNTQI-------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
           A+ P  V T +       S P+  + ++ E  K I   PL R A+P E+  L AFL    
Sbjct: 182 AICPGYVRTPMAESIARQSNPEDPESVLTEMAKAI---PLRRLADPLEVGELAAFLASDE 238

Query: 248 ASYITGQVISIDGGYT 263
           +SY+TG    IDGG T
Sbjct: 239 SSYLTGTQNVIDGGST 254

Length = 263

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  128 bits (324), Expect = 4e-36
 Identities = 81/257 (31%), Positives = 122/257 (47%), Gaps = 16/257 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G  ALVTG +RGIG AI + LA+ GA V    R  +          + G K     C
Sbjct: 5   DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALAC 64

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEY-------TLEEYSSVMSTN 127
            +   +Q + L   +     G+L+ILVNNAA      A  Y        L  +   +  N
Sbjct: 65  HIGEMEQIDALFAHIRERH-GRLDILVNNAA------ANPYFGHILDTDLGAFQKTVDVN 117

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           +   + +   A  L+K  G  SIV ++SV G         Y+ +K A+  +TK  A E A
Sbjct: 118 IRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA 177

Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
              IRVNA+ P   +T+ +     +  + +    +A  PL R AEP+E++  V +L   A
Sbjct: 178 PFGIRVNALLPGLTDTKFASALFKNDAILKQA--LAHIPLRRHAEPSEMAGAVLYLASDA 235

Query: 248 ASYITGQVISIDGGYTA 264
           +SY TG+ +++DGGY +
Sbjct: 236 SSYTTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  128 bits (323), Expect = 5e-36
 Identities = 82/255 (32%), Positives = 127/255 (49%), Gaps = 12/255 (4%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           +SL G  ALVTG   G+G  I   LA  GA +   GR +   +E  Q+ E+ G +     
Sbjct: 1   FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLT 58

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DLS  +  + L+++    F G ++ILVNNA ++    A E++ +++  VM+ N++S + 
Sbjct: 59  ADLSDIEAIKALVDSAVEEF-GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFF 117

Query: 134 LCQLAHPLLKASGNA----SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           L Q A       G      +I  M S  G I +P   +Y ASK A+  LTK LA EWA  
Sbjct: 118 LTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVP---SYTASKHAVAGLTKLLANEWAAK 174

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            I VNA++P  + T  +     D      +  + + P  R   P++I     FL   A+ 
Sbjct: 175 GINVNAIAPGYMATNNTQALRADEDRNAAI--LERIPAGRWGTPDDIGGPAVFLASSASD 232

Query: 250 YITGQVISIDGGYTA 264
           Y+ G  +++DGG+ A
Sbjct: 233 YVNGYTLAVDGGWLA 247

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  127 bits (321), Expect = 7e-36
 Identities = 76/253 (30%), Positives = 115/253 (45%), Gaps = 24/253 (9%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFK------VTGS 72
            ALVTG  RGIG AI  EL   G  V       N   +  ++W    GF           
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGN---DCAKDWFEEYGFTEDQVRLKELD 60

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           V D     +    IE      +G ++ILVNNA +         + +E++ V++TN+ S +
Sbjct: 61  VTDTEECAEALAEIEEE----EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVF 116

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           ++ Q     +   G   I+ +SSV G       + Y+A+K  +   TK LA E A   I 
Sbjct: 117 NVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGIT 176

Query: 193 VNAVSPWAVNT---QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           VN ++P  + T   +   P++          ++ + P+ R   P EI+  VAFL   AA 
Sbjct: 177 VNCIAPGYIATPMVEQMGPEVLQ-------SIVNQIPMKRLGTPEEIAAAVAFLVSEAAG 229

Query: 250 YITGQVISIDGGY 262
           +ITG+ ISI+GG 
Sbjct: 230 FITGETISINGGL 242

Length = 245

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 1e-35
 Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 7/256 (2%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           ++ L    A+VTG  RG+G AI    A  GA V    R ++ ++E  ++  + G +    
Sbjct: 5   RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVV 64

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             DL+  +    L       F G+L+I+VNN    +       + ++ +   + NV +++
Sbjct: 65  AADLAHPEATAGLAGQAVEAF-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAH 123

Query: 133 HLCQLAHPL-LKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
            L   A PL L+ SG  S++ +SS  G ++    +AY  +K A+   T+  A +     I
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RI 182

Query: 192 RVNAVSPWAVNTQ-ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           RVNA++P ++ T  +     ND L     K    TPL R  +P +I+    +L  PA SY
Sbjct: 183 RVNAIAPGSILTSALEVVAANDELRAPMEK---ATPLRRLGDPEDIAAAAVYLASPAGSY 239

Query: 251 ITGQVISIDGGYTAGN 266
           +TG+ + +DGG T  N
Sbjct: 240 LTGKTLEVDGGLTFPN 255

Length = 263

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  125 bits (317), Expect = 4e-35
 Identities = 78/251 (31%), Positives = 115/251 (45%), Gaps = 5/251 (1%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
             L G  A+VTG   G G  I    A+ GA V     D N         +     +    
Sbjct: 1   MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIA--DINADGAERVAADIGEAAIAIQA 58

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKR-ATEYTLEEYSSVMSTNVESSY 132
            D++     E ++E   S F G+L+ILVNNA +    +   E   EE+  V + NV+S Y
Sbjct: 59  -DVTKRADVEAMVEAALSKF-GRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIY 116

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
              Q   P ++  G   I+ ++S AG    P L+ Y ASKG +   TK +A E A  +IR
Sbjct: 117 LSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIR 176

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           VN + P A  T +    + +   +   K  A  PL R + P++I+    +L    AS+IT
Sbjct: 177 VNCLCPVAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANAALYLASDEASFIT 236

Query: 253 GQVISIDGGYT 263
           G  + +DGG  
Sbjct: 237 GVALEVDGGRC 247

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  125 bits (317), Expect = 5e-35
 Identities = 81/252 (32%), Positives = 116/252 (46%), Gaps = 16/252 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+G TAL+TGGT GIG     +    GA V   GRD   +     E       +     D
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGD 63

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++   Q+  L + ++  F G+L+ +  NA +       ++    +    +TNV+  Y L 
Sbjct: 64  VA--AQKA-LAQALAEAF-GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLI 119

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           Q   PLL  +  ASIV   S+   I +P  S YAASK A+  L K L+ E     IRVNA
Sbjct: 120 QALLPLL--ANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNA 177

Query: 196 VSPWAVNTQ------ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           VSP  V T       +    L D +  +   L+   PL R   P EI+  V +L    ++
Sbjct: 178 VSPGPVQTPLYGKLGLPEATL-DAVAAQIQALV---PLGRFGTPEEIAKAVLYLASDESA 233

Query: 250 YITGQVISIDGG 261
           +I G  I +DGG
Sbjct: 234 FIVGSEIIVDGG 245

Length = 249

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  125 bits (317), Expect = 6e-35
 Identities = 79/256 (30%), Positives = 116/256 (45%), Gaps = 21/256 (8%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESKGFKVTGSVCDLS 77
             ALVTGG RGIG  I   LA  G  +      D   +    QE  + G +V     D++
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNVESSYHLC 135
                E +++   + + G+++ LVNNA + V  R    + T E +  V++ N+   + L 
Sbjct: 63  DLSAHEAMLDAAQAAW-GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121

Query: 136 Q-LAHPLLKASGNA-----SIVFMSSV-AGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           Q +A  +L           SIVF+SSV A  +S  R   Y  SK  ++   +  A   A 
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNR-GEYCISKAGLSMAAQLFAARLAE 180

Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQE-YVKLIAK--TPLARSAEPNEISPLVAFLCL 245
           + I V  V P  + T ++ P      V   Y  LIAK   P+ R  EP +++  VA L  
Sbjct: 181 EGIGVYEVRPGLIKTDMTAP------VTAKYDALIAKGLVPMPRWGEPEDVARAVAALAS 234

Query: 246 PAASYITGQVISIDGG 261
               Y TGQ I +DGG
Sbjct: 235 GDLPYSTGQAIHVDGG 250

Length = 256

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  126 bits (317), Expect = 6e-35
 Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 29/273 (10%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+   A++TGGT  +G A+   LA+ GA V   GR+Q   ++  +E  + G +      
Sbjct: 2   SLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAA 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT---------------EYTLEE 119
           D+      E+  E + + F G ++IL+N A       AT               +   E 
Sbjct: 62  DVLDRASLERAREEIVAQF-GTVDILINGAG-GNHPDATTDPEHYEPETEQNFFDLDEEG 119

Query: 120 YSSVMSTNVESSYHLCQ-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL 178
           +  V   N+  S+   Q     +L+  G  SI+ +SS+     + ++ AY+A+K A++  
Sbjct: 120 WEFVFDLNLNGSFLPSQVFGKDMLEQKG-GSIINISSMNAFSPLTKVPAYSAAKAAVSNF 178

Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQE------YVKLIAKTPLARSAE 232
           T+ LA E+AT  +RVNA++P      ++P +   L+  +        K++ +TP+ R  +
Sbjct: 179 TQWLAVEFATTGVRVNAIAPGFF---VTPQNRKLLINPDGSYTDRSNKILGRTPMGRFGK 235

Query: 233 PNEISPLVAFLC-LPAASYITGQVISIDGGYTA 264
           P E+   + FL    A+S++TG VI +DGG++A
Sbjct: 236 PEELLGALLFLASEKASSFVTGVVIPVDGGFSA 268

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  123 bits (312), Expect = 1e-34
 Identities = 74/244 (30%), Positives = 106/244 (43%), Gaps = 13/244 (5%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASV--HTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
            ALVTG  + IG AI E LA  G  V  H   R +        E  +          DLS
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVH-YNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
                  L+      F G+ ++LVNNA+        + + + ++ +   N+++ Y L Q 
Sbjct: 61  DFAACADLVAAAFRAF-GRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQA 119

Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
               L  S N SI+ +        +    AY  SK A+  LT++ A E A  +IRVN ++
Sbjct: 120 FARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAP-NIRVNGIA 178

Query: 198 PWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
           P      I  P+  D   +E      K PL R     EI+  V FL     +YITGQ+I 
Sbjct: 179 P----GLILLPEDMDAEYRENAL--RKVPLKRRPSAEEIADAVIFLLDS--NYITGQIIK 230

Query: 258 IDGG 261
           +DGG
Sbjct: 231 VDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  123 bits (311), Expect = 3e-34
 Identities = 82/248 (33%), Positives = 120/248 (48%), Gaps = 12/248 (4%)

Query: 21  ALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           ALVTG +RGIG AI   LA  G        R +    E  +E E+ G K      ++   
Sbjct: 7   ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVG-- 64

Query: 80  DQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
              EK+ E  + + +  G+L++ VNNAA  V++ A E     +   M+ N ++     Q 
Sbjct: 65  -DVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQE 123

Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
           A  L++  G   I+ +SS+     +   +    SK A+  LT+ LA E A   I VNAVS
Sbjct: 124 AAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVS 183

Query: 198 PWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
             AV+T      P+  +LL ++      KTP  R  EP +++  V FLC P A  I GQ 
Sbjct: 184 GGAVDTDALKHFPNREELL-EDARA---KTPAGRMVEPEDVANAVLFLCSPEADMIRGQT 239

Query: 256 ISIDGGYT 263
           I +DGG +
Sbjct: 240 IIVDGGRS 247

Length = 250

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  123 bits (311), Expect = 4e-34
 Identities = 79/252 (31%), Positives = 125/252 (49%), Gaps = 11/252 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK---VTG 71
            L G  A++TG + GIG A  +  AR GA V    R Q  +++ + E  ++G +   + G
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVES 130
            V D ++    + L+      F G L+I  NNA  +  M    E +LE +   ++TN+ S
Sbjct: 63  DVRDEAYA---KALVALAVERF-GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTS 118

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAG-AISIPRLSAYAASKGAINQLTKNLACEWATD 189
           ++   +   P + A G  S++F S+  G     P ++AYAASK  +  LT+ LA E+   
Sbjct: 119 AFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQ 178

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            IRVNA+ P   +T +     +      +V       L R A+P EI+    FL   AAS
Sbjct: 179 GIRVNALLPGGTDTPMGRAMGDTPEALAFVA--GLHALKRMAQPEEIAQAALFLASDAAS 236

Query: 250 YITGQVISIDGG 261
           ++TG  + +DGG
Sbjct: 237 FVTGTALLVDGG 248

Length = 254

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  123 bits (309), Expect = 5e-34
 Identities = 82/253 (32%), Positives = 128/253 (50%), Gaps = 9/253 (3%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           + L G  AL+TG + GIG  +       GA V    R  + + +   E  + G KV    
Sbjct: 5   FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVC 64

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CD+S   Q   +++ V++   G ++I V NA ++ +    +  LEE+  + +TNV   + 
Sbjct: 65  CDVSQHQQVTSMLDQVTAELGG-IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFL 123

Query: 134 LCQLA-HPLLKASGNASIVFMSSVAG-AISIPR-LSAYAASKGAINQLTKNLACEWATDS 190
             Q A   ++K      I+  +S++G  I++P+ +S Y ASK A+  LTK +A E A   
Sbjct: 124 TAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHK 183

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           IRVN+VSP  + T++  P       +       K PL R   P E++ L  +L   A+SY
Sbjct: 184 IRVNSVSPGYILTELVEP-----YTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSY 238

Query: 251 ITGQVISIDGGYT 263
           +TG  I IDGGYT
Sbjct: 239 MTGSDIVIDGGYT 251

Length = 253

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  128 bits (322), Expect = 7e-34
 Identities = 83/257 (32%), Positives = 134/257 (52%), Gaps = 24/257 (9%)

Query: 17  RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG----S 72
                 +TGG RGIG A+ +  A  G        D+ +I +R  E   K  +  G    S
Sbjct: 268 SPRVVAITGGARGIGRAVADRFAAAG--------DRLLIIDRDAEGAKKLAEALGDEHLS 319

Query: 73  VC-DLSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVES 130
           V  D++     E     + + + G+L++LVNNA +  V K + E + E+++ V   N+  
Sbjct: 320 VQADITDEAAVESAFAQIQARW-GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSG 378

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           ++  C  A   L + G   IV + S+A  +++P  +AY ASK A+  L+++LACEWA   
Sbjct: 379 AFA-CARAAARLMSQGGV-IVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAG 436

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLV---QEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
           IRVN V+P  + T    P +  L      ++  +  + PL R  +P E++  +AFL  PA
Sbjct: 437 IRVNTVAPGYIET----PAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPA 492

Query: 248 ASYITGQVISIDGGYTA 264
           ASY+ G  +++DGG+TA
Sbjct: 493 ASYVNGATLTVDGGWTA 509

Length = 520

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  122 bits (309), Expect = 9e-34
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 11/254 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVT 70
            L G   ++TGG+ G+G A+     +  A V     +   + N + E I++   +   V 
Sbjct: 4   DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
           G   D++       LI+T    F G L++++NNA +     + E +LE+++ V++TN+  
Sbjct: 64  G---DVTVESDVVNLIQTAVKEF-GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTG 119

Query: 131 SYHLCQLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           ++   + A    ++     +I+ MSSV   I  P    YAASKG +  +T+ LA E+A  
Sbjct: 120 AFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPK 179

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            IRVN + P A+NT I+     D   ++   + +  P+    +P EI+ + A+L    AS
Sbjct: 180 GIRVNNIGPGAINTPINAEKFAD--PKQRADVESMIPMGYIGKPEEIAAVAAWLASSEAS 237

Query: 250 YITGQVISIDGGYT 263
           Y+TG  +  DGG T
Sbjct: 238 YVTGITLFADGGMT 251

Length = 261

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  122 bits (307), Expect = 1e-33
 Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 12/253 (4%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           +    G  ALVTG  +GIG A V+ LA+ GA V    R Q  ++  ++E       +   
Sbjct: 2   ELDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPG----IEPV 57

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             DLS  D  E+ + +V     G +++LVNNAA+ +++   E T E +      NV +  
Sbjct: 58  CVDLSDWDATEEALGSV-----GPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVI 112

Query: 133 HLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           H+ Q+    + A G   SIV +SS A   ++   + Y ++K A++ LTK +A E     I
Sbjct: 113 HVSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKI 172

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RVN+V+P  V T +   + +D   ++  K++ + PL + AE  ++   + FL    +S  
Sbjct: 173 RVNSVNPTVVMTDMGRDNWSD--PEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMT 230

Query: 252 TGQVISIDGGYTA 264
           TG  + +DGG+ A
Sbjct: 231 TGSTLPVDGGFLA 243

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  121 bits (306), Expect = 1e-33
 Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 15/247 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+G    +TGG  G+G A    LA  GA V   GR    +++ +    +   ++ G   
Sbjct: 4   SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG--I 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL       + ++ V+  F G+L+ LVN A   V     +   + +  +   NV+++ + 
Sbjct: 62  DLVDPQAARRAVDEVNRQF-GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNA 120

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            + A P L ASG   IV + + A   + P + AYAA+K  + +LT+ LA E     I VN
Sbjct: 121 SKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVN 180

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           AV P  ++T  +  D+ D               +R   P +I+ ++AFL    A  ITG 
Sbjct: 181 AVLPSIIDTPPNRADMPD------------ADFSRWVTPEQIAAVIAFLLSDEAQAITGA 228

Query: 255 VISIDGG 261
            I +DGG
Sbjct: 229 SIPVDGG 235

Length = 239

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  121 bits (306), Expect = 1e-33
 Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 7/248 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVC 74
           L    A+VTG +RGIG AI   LA  G +V           +E + E E+ G +      
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++      +L +   + F G++++LVNNA ++ +    ++ LE++   ++TN+  ++ +
Sbjct: 63  DVADAAAVTRLFDAAETAF-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVV 121

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            + A   L   G   I+ +S+   A+ +P    YAASK A+  L   LA E     I VN
Sbjct: 122 LREAARHLGQGGR--IINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVN 179

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           AV+P  V T++     +   + +   L    PL R   P EI+  VAFL  P  +++ GQ
Sbjct: 180 AVAPGPVATELFFNGKSAEQIDQLAGL---APLERLGTPEEIAAAVAFLAGPDGAWVNGQ 236

Query: 255 VISIDGGY 262
           V+ ++GG+
Sbjct: 237 VLRVNGGF 244

Length = 245

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  127 bits (322), Expect = 2e-33
 Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 19/261 (7%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G  ALVTG   GIG A  + LA  GA V     D+    E          +  G  C
Sbjct: 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEE-AAEAAAAELGGPDRALGVAC 477

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++     +   E  +  F G ++I+V+NA + +     E + E++      N    + +
Sbjct: 478 DVTDEAAVQAAFEEAALAFGG-VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLV 536

Query: 135 CQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A  ++KA G   SIVF++S       P   AY A+K A   L + LA E   D IRV
Sbjct: 537 AREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRV 596

Query: 194 NAVSPWAVN--TQISPPDLN-----------DLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           N V+P AV   + I   +             + L + Y     +  L R   P +++  V
Sbjct: 597 NGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRA---RNLLKREVTPEDVAEAV 653

Query: 241 AFLCLPAASYITGQVISIDGG 261
            FL     S  TG +I++DGG
Sbjct: 654 VFLASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 2e-33
 Identities = 78/254 (30%), Positives = 130/254 (51%), Gaps = 9/254 (3%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           + L G  ALVTG ++GIGYA+ E LA+ GA V   GRD   +    +  + +G       
Sbjct: 6   FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALA 65

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D++  D     I+   +   G ++ILVNNA +       ++  + +  ++ TN+ S ++
Sbjct: 66  FDVTDHDAVRAAIDAFEAEI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFY 124

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           + Q     + A G   I+ ++SV  A++ P ++ Y A+KGA+  LTK +A +WA   ++ 
Sbjct: 125 VGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQC 184

Query: 194 NAVSPWAVNTQISPPDLNDLLVQE---YVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           NA++P   +T      LN  LV +      L  +TP  R  +  E+     FL   A+S+
Sbjct: 185 NAIAPGYFDTP-----LNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSF 239

Query: 251 ITGQVISIDGGYTA 264
           + G V+ +DGG TA
Sbjct: 240 VNGHVLYVDGGITA 253

Length = 255

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  121 bits (305), Expect = 3e-33
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 23/258 (8%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G  ALVTGG  GIG AI + LA  GA+V     D   I E++ E    G +  G  CD++
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPE-IAEKVAEAAQGGPRALGVQCDVT 59

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
              Q +   E     F G L+I+V+NA +       E +LE+++  M  N+   + + + 
Sbjct: 60  SEAQVQSAFEQAVLEFGG-LDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSRE 118

Query: 138 AHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
           A  ++K+ G   +IVF +S       P  +AY+A+K A   L + LA E   D IRVN V
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178

Query: 197 SP-------------WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL 243
           +P             W      +      LL +EY     +  L R   P +++  V  +
Sbjct: 179 NPDAVFRGSKIWEGVWRAARAKAY----GLLEEEYR---TRNLLKREVLPEDVAEAVVAM 231

Query: 244 CLPAASYITGQVISIDGG 261
                   TG ++++DGG
Sbjct: 232 ASEDFGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  120 bits (303), Expect = 5e-33
 Identities = 75/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
            A+VT    GIG A    LA+ G  +  T   D+    E  +E  S G +      DLS 
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD 63

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
             +  + ++ +     G++++LVNNA  +      +   +E+  + + +V+ ++   Q+A
Sbjct: 64  LPEGAQALDKLIQRL-GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIA 122

Query: 139 -HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
              ++K      I+ ++SV     +P  SAY A+K A+  LTK +A E     I VNAV+
Sbjct: 123 ARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVA 182

Query: 198 PWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
           P A+ T ++  D +D+            PL R  + +EI+ LVA+LC   ASY TGQ + 
Sbjct: 183 PGAIATPMNGMDDSDVKPDS----RPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLI 238

Query: 258 IDGGYTAGN 266
           +DGG+   N
Sbjct: 239 VDGGFMLAN 247

Length = 256

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  120 bits (302), Expect = 5e-33
 Identities = 78/253 (30%), Positives = 126/253 (49%), Gaps = 21/253 (8%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G  AL+T   +GIG AI    AR GA+V     D   INE   +   +G  +T  V D++
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVI--ATD---INEEKLKELERGPGITTRVLDVT 56

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
             +Q   L +       G++++L N A  V      +   +++   M+ NV S Y + + 
Sbjct: 57  DKEQVAALAKEE-----GRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKA 111

Query: 138 AHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
             P + A  + SI+ MSSVA +I  +P    Y+ +K A+  LTK++A ++A   IR NA+
Sbjct: 112 VLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAI 171

Query: 197 SPWAVNTQISPPDLNDLLVQE------YVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
            P  V+T    P L + +  +           A+ PL R A P E++ L  +L    ++Y
Sbjct: 172 CPGTVDT----PSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESAY 227

Query: 251 ITGQVISIDGGYT 263
           +TG  + IDGG++
Sbjct: 228 VTGTAVVIDGGWS 240

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  120 bits (302), Expect = 6e-33
 Identities = 83/250 (33%), Positives = 112/250 (44%), Gaps = 8/250 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A+VTG   GIG A    LAR GA V     D       + +       +   V D
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYT-LEEYSSVMSTNVESSYHL 134
                Q   L E     F G L++LVNNA  + +  A   T L  +   M+ N+  ++  
Sbjct: 61  ---EQQVAALFERAVEEF-GGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLC 116

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           C+ A P + A G  SIV +SS+AG    P   AY ASK AI  LT+ LA E     IR N
Sbjct: 117 CRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCN 176

Query: 195 AVSPWAVNT---QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           A++P  ++T             L      L+      R   P +++  V FL    AS+I
Sbjct: 177 ALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDASFI 236

Query: 252 TGQVISIDGG 261
           TGQV+ +DGG
Sbjct: 237 TGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  120 bits (302), Expect = 7e-33
 Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 19/257 (7%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
            LVTG  +GIGYA+   LA  GA V    R+   + E + +    G+       D++   
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
             +++++ +   + G +++LVN A ++ +      + E++ +  + N    +++ Q   P
Sbjct: 61  AVDEVVQRLEREY-GPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119

Query: 141 LLKASGNASIVFMSSVAGAISIPRL--SAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
            +K   + +IV + S   A ++PR+  +AYAASK A+  LTK L  E A   IR N VSP
Sbjct: 120 RMKRRRSGAIVTVGS--NAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSP 177

Query: 199 WAVNTQISPPDLNDLLVQEY--VKLIAKT--------PLARSAEPNEISPLVAFLCLPAA 248
            + +T         L   EY   ++IA +        PL + AEP++I+  V FL    A
Sbjct: 178 GSTDT----EMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDLA 233

Query: 249 SYITGQVISIDGGYTAG 265
           S+IT   + +DGG T G
Sbjct: 234 SHITMHDLVVDGGATLG 250

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  120 bits (302), Expect = 8e-33
 Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 28/260 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+   A+VTGG++GIG A+V  L   G++V      +          +   FK      D
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP------SYNDVDYFK-----VD 52

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S  +Q  K I+ V S + G+++ILVNNA +           +E+  +++ NV   + + 
Sbjct: 53  VSNKEQVIKGIDYVISKY-GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMS 111

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P +       I+ ++SV         +AY  SK A+  LT+++A ++A  +IR  A
Sbjct: 112 KYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIRCVA 170

Query: 196 VSPWAVNTQISPPDLN---DLLVQEYVKLIAKT--------PLARSAEPNEISPLVAFLC 244
           V P ++ T    P L    +L V +  + + +         P+ R  +P E++ +VAFL 
Sbjct: 171 VCPGSIRT----PLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLA 226

Query: 245 LPAASYITGQVISIDGGYTA 264
              AS+ITG+ +++DGG  A
Sbjct: 227 SDLASFITGECVTVDGGLRA 246

Length = 258

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 9e-33
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 10/251 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
                A+VTG   GIG A  E LAR GASV     +        ++  + G        D
Sbjct: 4   FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVD 63

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYT--LEEYSSVMSTNVESSY 132
           +S  D  + + +   S F G ++ LVNNAA+   MK     T   + Y   MS N++ + 
Sbjct: 64  VSDPDSAKAMADATVSAF-GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
              +  +  +   G  +IV  SS A   +    + Y  +K  +N LT+ LA E    +IR
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTA---AWLYSNFYGLAKVGLNGLTQQLARELGGMNIR 179

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           VNA++P  ++T+ +        V + VK I   PL+R   P ++  +  FL    AS+IT
Sbjct: 180 VNAIAPGPIDTEATRTVTPKEFVADMVKGI---PLSRMGTPEDLVGMCLFLLSDEASWIT 236

Query: 253 GQVISIDGGYT 263
           GQ+ ++DGG  
Sbjct: 237 GQIFNVDGGQI 247

Length = 250

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  118 bits (299), Expect = 1e-32
 Identities = 66/193 (34%), Positives = 93/193 (48%), Gaps = 9/193 (4%)

Query: 20  TALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
            ALVTG  RGIG+ IV +LA+ G  +V    RD       +++  ++G  V     D++ 
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMK--RATEYTLEEYSSVMSTNVESSYHLCQ 136
               E   + V   + G L+ILVNNA  +  K    +  T E+    M TN   +  + Q
Sbjct: 62  DASIEAAADFVEEKY-GGLDILVNNAG-IAFKGFDDSTPTREQARETMKTNFFGTVDVTQ 119

Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
              PLLK S    IV +SS  G+++    SAY  SK A+N LT+ LA E     I+VNA 
Sbjct: 120 ALLPLLKKSPAGRIVNVSSGLGSLT----SAYGVSKAALNALTRILAKELKETGIKVNAC 175

Query: 197 SPWAVNTQISPPD 209
            P  V T +    
Sbjct: 176 CPGWVKTDMGGGK 188

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 1e-32
 Identities = 81/251 (32%), Positives = 111/251 (44%), Gaps = 7/251 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+    +VTGG  GIG AI   LA  GA     GR     +E  +E  +   +      D
Sbjct: 5   LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA-PDDEFAEELRALQPRAEFVQVD 63

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           L+   Q    +E   + F G+++ LVNNA  V      E   E + + +  N+   Y + 
Sbjct: 64  LTDDAQCRDAVEQTVAKF-GRIDGLVNNAG-VNDGVGLEAGREAFVASLERNLIHYYVMA 121

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
               P LKAS   +IV +SS          S YAA+KGA   LT+  A   A D +RVNA
Sbjct: 122 HYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNA 180

Query: 196 VSPWAVNTQISPPDLNDLLVQE--YVKLIAKTPL-ARSAEPNEISPLVAFLCLPAASYIT 252
           V P  V T +    +      E     + AK PL  R     EI+    FL    +S+ T
Sbjct: 181 VIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTT 240

Query: 253 GQVISIDGGYT 263
           GQ + +DGGY 
Sbjct: 241 GQWLFVDGGYV 251

Length = 258

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  119 bits (300), Expect = 2e-32
 Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 19/264 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-------------INERIQEW 62
           L G  A +TG  RG G A    LA  GA +        +             ++E  +  
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 63  ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS 122
           E+ G KV     D+    +   ++E     F G+L+++V NA ++   R+ E + E++ +
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQF-GRLDVVVANAGVLSYGRSWELSEEQWDT 119

Query: 123 VMSTNVESSYHLCQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN 181
           V+  N+   +  C+   P +++     SI+  SSVAG  ++P L+ YAA+K  +  LTK 
Sbjct: 120 VLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKT 179

Query: 182 LACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLI----AKTPLARSAEPNEIS 237
           LA E A   IRVN++ P++V+T +  P+       +Y +         P++    P +++
Sbjct: 180 LANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPEDVA 239

Query: 238 PLVAFLCLPAASYITGQVISIDGG 261
             V +L    + YITG  + +D G
Sbjct: 240 DAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  119 bits (299), Expect = 2e-32
 Identities = 75/252 (29%), Positives = 122/252 (48%), Gaps = 8/252 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A++TGG  GIG A     A+ GA V     D +       E       ++   CD
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDP--DISFVHCD 59

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALV--VMKRATEYTLEEYSSVMSTNVESSYH 133
           ++        ++T  + F G+L+I+ NNA ++        E +LEE+  V+  NV  ++ 
Sbjct: 60  VTVEADVRAAVDTAVARF-GRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFL 118

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
             + A  ++  +   SIV ++SVAG +      AY ASK A+  LT++ A E     IRV
Sbjct: 119 GTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRV 178

Query: 194 NAVSPWAVNTQI--SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           N VSP+ V T +  +   + D  ++E V+  A      +  P +I+  V +L    + Y+
Sbjct: 179 NCVSPYGVATPLLTAGFGVEDEAIEEAVRGAA-NLKGTALRPEDIAAAVLYLASDDSRYV 237

Query: 252 TGQVISIDGGYT 263
           +GQ + +DGG T
Sbjct: 238 SGQNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  118 bits (298), Expect = 2e-32
 Identities = 89/262 (33%), Positives = 128/262 (48%), Gaps = 23/262 (8%)

Query: 15  SLRGMTALVTGGTR--GIGYAIVEELARFGASV---HTCGRDQNMI-----NERIQ---E 61
            L+   A+VTG +R  GIG AI +ELA  GA +   +    D+ M      +E+IQ   E
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62

Query: 62  WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS 121
               G KV+    DL+  D  ++L+  V+    G  +ILVNNAA       +  T EE  
Sbjct: 63  LLKNGVKVSSMELDLTQNDAPKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELD 121

Query: 122 SVMSTNVESSYHL-CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
                NV ++  L  Q A    K SG   I+ M+S      +    AYAA+KGAI+ LT 
Sbjct: 122 KHYMVNVRATTLLSSQFARGFDKKSG-GRIINMTSGQFQGPMVGELAYAATKGAIDALTS 180

Query: 181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           +LA E A   I VNA++P   +T      + + + Q    L+   P  R  EP + + L+
Sbjct: 181 SLAAEVAHLGITVNAINPGPTDTGW----MTEEIKQG---LLPMFPFGRIGEPKDAARLI 233

Query: 241 AFLCLPAASYITGQVISIDGGY 262
            FL    A +ITGQ+I  +GG+
Sbjct: 234 KFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  118 bits (298), Expect = 3e-32
 Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 3/191 (1%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L+G  AL+TG + GIG A    LA  GA V    R +  +     E  +          
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALAL--AL 60

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++     E  IE +   F G+++ILVNNA L +     E  L+++  ++ TNV+   + 
Sbjct: 61  DVTDRAAVEAAIEALPEEF-GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNG 119

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +   P +    +  I+ + S+AG    P  + Y A+K A+   +  L  E A   IRV 
Sbjct: 120 TRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVT 179

Query: 195 AVSPWAVNTQI 205
            +SP  V T  
Sbjct: 180 VISPGLVETTE 190

Length = 246

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  118 bits (297), Expect = 4e-32
 Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 27/260 (10%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSVCDL 76
               L+TG    IG A  + L   GA +     +   + +  +E  +    +V     D+
Sbjct: 2   DKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDI 61

Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVV---MKRATEYTLEEYSSVMSTNVESSYH 133
           +  +  ++LIE+    F G+++IL+NNA         R  E+  E+++ V++ N+  ++ 
Sbjct: 62  TSKESIKELIESYLEKF-GRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLS-----------AYAASKGAINQLTKNL 182
             Q    L K  G  SI+ ++S+ G +  P               Y+  K  I  LTK L
Sbjct: 121 CSQAFIKLFKKQGKGSIINIASIYG-VIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYL 179

Query: 183 ACEWATDSIRVNAVSPWAV-NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA 241
           A  +A   IRVNA+SP  + N Q          +++Y K   K PL R   P ++   + 
Sbjct: 180 AKYYADTGIRVNAISPGGILNNQ------PSEFLEKYTK---KCPLKRMLNPEDLRGAII 230

Query: 242 FLCLPAASYITGQVISIDGG 261
           FL   A+SY+TGQ + IDGG
Sbjct: 231 FLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  117 bits (296), Expect = 4e-32
 Identities = 80/252 (31%), Positives = 118/252 (46%), Gaps = 21/252 (8%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
               T L+TG   GIG A        GA V+  G D+    +      S  F       D
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVY--GVDKQDKPD-----LSGNFHFL--QLD 53

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           LS  D  E L + V SV     +IL N A  L   K   + +LEE+  +  TN+ S++ L
Sbjct: 54  LS--DDLEPLFDWVPSV-----DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLL 106

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +   P +    +  I+ M S+A  ++    +AY ASK A+   TK LA ++A D I+V 
Sbjct: 107 TRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVF 166

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAASYITG 253
            ++P AV T ++  D            +A+ TP+ R AEP E++ L  FL    A Y+ G
Sbjct: 167 GIAPGAVKTPMTAADFEP---GGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQG 223

Query: 254 QVISIDGGYTAG 265
            ++ IDGG+T  
Sbjct: 224 TIVPIDGGWTLK 235

Length = 235

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  118 bits (297), Expect = 4e-32
 Identities = 80/248 (32%), Positives = 123/248 (49%), Gaps = 17/248 (6%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASV--HTCGRDQNMINERIQEWESKGFKVTGSVC--- 74
            AL+TGG R IG AI   L   G  V  H   R     +    E  +      GS     
Sbjct: 8   VALITGGARRIGAAIARTLHAAGYRVAIH-YHRSAAEADALAAELNALR---PGSAAALQ 63

Query: 75  -DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DL   D   +L+    + F G+L+ LVNNA+          T  ++  + ++N+++ + 
Sbjct: 64  ADLLDPDALPELVAACVAAF-GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFF 122

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L Q A P L+    A IV ++ +     +     Y A+K A+  LT++LA E A + +RV
Sbjct: 123 LSQAAAPQLRKQRGA-IVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAPE-VRV 180

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NAV+P A+   + P D N    +    ++A+TPL R   P +I+  V FL L  AS+ITG
Sbjct: 181 NAVAPGAI---LWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFL-LADASFITG 236

Query: 254 QVISIDGG 261
           Q++++DGG
Sbjct: 237 QILAVDGG 244

Length = 249

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  117 bits (296), Expect = 6e-32
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 4/189 (2%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
             L+TG + GIG A+   LA  G  V    R+ + +    +        +     D++  
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLE---LDVTDE 58

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           +  +  ++ V   F G++++LVNNA   +     E ++EE   +   NV     + +   
Sbjct: 59  ESIKAAVKEVIERF-GRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFL 117

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           PL++  G+  IV +SSVAG +  P L  Y ASK A+  L+++L  E A   I+V  + P 
Sbjct: 118 PLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEPG 177

Query: 200 AVNTQISPP 208
            V T  +  
Sbjct: 178 PVRTGFADN 186

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  117 bits (296), Expect = 7e-32
 Identities = 78/264 (29%), Positives = 118/264 (44%), Gaps = 28/264 (10%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
               G T  VTG  +GIGYA+       GA V   G DQ            + +     V
Sbjct: 4   MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKV--IGFDQA-------FLTQEDYPFATFV 54

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+S      ++ + + +   G L++LVN A ++ M      + E++    + N   +++
Sbjct: 55  LDVSDAAAVAQVCQRLLAET-GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFN 113

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRL--SAYAASKGAINQLTKNLACEWATDSI 191
           L +   P  +   + +IV + S A  +  PR+  +AY ASK A+  L K +  E A   +
Sbjct: 114 LFRAVMPQFRRQRSGAIVTVGSNAAHV--PRIGMAAYGASKAALTSLAKCVGLELAPYGV 171

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYV--KLIA------KT--PLARSAEPNEISPLVA 241
           R N VSP + +T         L V E    ++IA      K   PL + A P EI+  V 
Sbjct: 172 RCNVVSPGSTDT----DMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVL 227

Query: 242 FLCLPAASYITGQVISIDGGYTAG 265
           FL    AS+IT Q I +DGG T G
Sbjct: 228 FLASDLASHITLQDIVVDGGATLG 251

Length = 252

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 1e-31
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 15/256 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G   +V GGT GI   I +  AR GA+V    R Q  ++  + + +  G +  G   D
Sbjct: 7   FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSAD 66

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +      E     ++  F G +++LV+ AA      A   +   + +V+  ++  ++++ 
Sbjct: 67  VRDYAAVEAAFAQIADEF-GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVL 125

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A+PLL+  G ASI+ +S+    + +P  +   A+K  ++ LT+ LA EW  + IRVN+
Sbjct: 126 KAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNS 184

Query: 196 VSPWAV------NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           + P  +            P+L   + Q         PL R+    +I+    FL    AS
Sbjct: 185 IVPGPIAGTEGMARLAPSPELQAAVAQ-------SVPLKRNGTKQDIANAALFLASDMAS 237

Query: 250 YITGQVISIDGGYTAG 265
           YITG V+ +DGG++ G
Sbjct: 238 YITGVVLPVDGGWSLG 253

Length = 264

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  117 bits (294), Expect = 1e-31
 Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 26/263 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L    A++TG + GIG A    LA+ GA V         ++E + + +S G K      D
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAYHVD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHL 134
           +S   Q +     +   F G++++L NNA +     R  EY ++ +  +M+ ++  ++ +
Sbjct: 63  ISDEQQVKDFASEIKEQF-GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLM 121

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            ++  PL+   G  SI+  SS +G  +    S Y A+KGA+   TK++A E+  D IR N
Sbjct: 122 TKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRAN 180

Query: 195 AVSPWAVNTQISPPDLNDLL-------------VQEYVKLIAKTPLARSAEPNEISPLVA 241
           A++P  + T    P ++ L               Q+++     TPL R  +P E++ LV 
Sbjct: 181 AIAPGTIET----PLVDKLTGTSEDEAGKTFRENQKWM-----TPLGRLGKPEEVAKLVV 231

Query: 242 FLCLPAASYITGQVISIDGGYTA 264
           FL    +S+ITG+ I IDGG  A
Sbjct: 232 FLASDDSSFITGETIRIDGGVMA 254

Length = 272

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  116 bits (291), Expect = 3e-31
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 10/251 (3%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            ALVTG T GIG AI   L + G  V  C R +  +   ++E    G +  G  CD+   
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSV 64

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ--L 137
            + E L+    + + G +++LVNNA         E   E +  V+ TN+   + + +  L
Sbjct: 65  PEIEALVAAAVARY-GPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVL 123

Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
               +   G   I+ ++S  G   +   + Y+ASK  +   TK L  E A   I VNAV 
Sbjct: 124 KAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 183

Query: 198 PWAVNTQISP------PDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           P  V T ++        D+ ++  +E + ++ A+ PL R   P E++ +VA+L    A+ 
Sbjct: 184 PGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDGAAA 243

Query: 251 ITGQVISIDGG 261
           +T Q +++ GG
Sbjct: 244 VTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 3e-31
 Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 3/189 (1%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+G  AL+TGG++GIG+AI E L   G  V    RDQ  + E   E  +KG  V G   
Sbjct: 3   SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAA 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+      ++ ++ + + F G L++L+ NA +       E T EE+  V+ TN+  +++ 
Sbjct: 62  DVRDEADVQRAVDAIVAAF-GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYT 120

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            + A P LK  G   I+ +SS+AG       +AY ASK  +   ++    +     I+V+
Sbjct: 121 IKAAVPALKRGGGY-IINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVS 179

Query: 195 AVSPWAVNT 203
            + P +V T
Sbjct: 180 TIMPGSVAT 188

Length = 237

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  116 bits (292), Expect = 4e-31
 Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 32/275 (11%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+G  A++TGG   +G A+ +ELAR GA V    R+Q      + E ++ G +      
Sbjct: 7   SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKA 66

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNA-------------ALVVMKRATEYTLEE-- 119
           D+   +  E+  + +   F G  +IL+N A               ++    T + L+E  
Sbjct: 67  DVLDKESLEQARQQILEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG 125

Query: 120 YSSVMSTNVESSYHLCQL-AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL 178
           +  V   N+  +    Q+ A  ++   G  +I+ +SS+     + ++ AY+A+K AI+  
Sbjct: 126 FEFVFDLNLLGTLLPTQVFAKDMVGRKG-GNIINISSMNAFTPLTKVPAYSAAKAAISNF 184

Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-DLLVQE---YV----KLIAKTPLARS 230
           T+ LA  +A   IRVNA++P    T     + N  LL  E         K++A TP+ R 
Sbjct: 185 TQWLAVHFAKVGIRVNAIAPGFFLT-----EQNRALLFNEDGSLTERANKILAHTPMGRF 239

Query: 231 AEPNEISPLVAFLCLP-AASYITGQVISIDGGYTA 264
            +P E+   + +L    A+S++TG V+ +DGG++A
Sbjct: 240 GKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSA 274

Length = 278

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score =  115 bits (290), Expect = 8e-31
 Identities = 84/253 (33%), Positives = 119/253 (47%), Gaps = 16/253 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV-----HTCGRDQNMINERIQEWESKGFKVT 70
           L+G  AL+TG   GIG A     AR GA +         +D   + + IQ    K   + 
Sbjct: 53  LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVE 129
           G + D +F  Q   L+E       G L+ILVN A     +K   + T E++ +   TNV 
Sbjct: 113 GDLKDEAFCRQ---LVERAVKELGG-LDILVNIAGKQTAVKDIADITTEQFDATFKTNVY 168

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           + + LC+ A P L     ASI+   S+      P L  YA++K AI   TK LA + A  
Sbjct: 169 AMFWLCKAAIPHLPPG--ASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEK 226

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAA 248
            IRVNAV+P  V T + P         E +      TP+ R  +P E++PL   L    +
Sbjct: 227 GIRVNAVAPGPVWTPLQPSGGQP---PEKIPDFGSETPMKRPGQPVEMAPLYVLLASQES 283

Query: 249 SYITGQVISIDGG 261
           SY+TG+V  + GG
Sbjct: 284 SYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 1e-30
 Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 10/259 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L G TA+VTG   GIG  I  ELAR GA+V     +Q+  N    E    G K  G   
Sbjct: 4   NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAM 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  D     I+ V+  F G ++ILV+NA + ++     Y+  ++  + + +V+ ++  
Sbjct: 64  DVTNEDAVNAGIDKVAERF-GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLT 122

Query: 135 CQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A   + K      +++M SV    + P  SAY  +K  +  L + LA E A  ++R 
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182

Query: 194 NAVSPWAVNT-----QISPPDLNDLLVQEYVK---LIAKTPLARSAEPNEISPLVAFLCL 245
           + V P  V T     QI        + +E V    ++ KT         +++  V FL  
Sbjct: 183 HVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS 242

Query: 246 PAASYITGQVISIDGGYTA 264
             ++ +TGQ   +  G+  
Sbjct: 243 FPSAALTGQSFVVSHGWFM 261

Length = 262

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  113 bits (286), Expect = 2e-30
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 24/263 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           L G  ALVTGGT+G+G AI    A  GA  +  CGR+      +  E E+ G K      
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNVESSY 132
           DLS  +   +++      F G+L+ LVN A L    R T  + + E +    + NV + +
Sbjct: 64  DLSDVEDCRRVVAAADEAF-GRLDALVNAAGLT--DRGTILDTSPELFDRHFAVNVRAPF 120

Query: 133 HLCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
            L Q A  L++      +IV + S++     P L+AY ASKGA+  LT+N A     + I
Sbjct: 121 FLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRI 180

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYV--------KLIAKTPLARSAEPNEISPLVAFL 243
           RVN ++   + T     +  D + +E+         K  A  P  R  +P+E++  VAFL
Sbjct: 181 RVNGLNIGWMAT-----EGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFL 235

Query: 244 CLPAASYITGQVI----SIDGGY 262
               +  +TG VI    S+ G Y
Sbjct: 236 LSDESGLMTGSVIDFDQSVWGAY 258

Length = 260

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score =  114 bits (285), Expect = 2e-30
 Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 24/259 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L+G  ALVTG +RGIG AI + LA  GA  ++H   R +    E + E +S G    GS 
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA-EETVYEIQSNG----GSA 56

Query: 74  CDLSFGDQREKL--IETVSSVFDGKL---------NILVNNAALVVMKRATEYTLEEYSS 122
              S G   E L  +E + S  D +L         +IL+NNA +       E T + +  
Sbjct: 57  --FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDR 114

Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
           ++S N ++ + + Q A   L+   N+ I+ +SS A  IS+P   AY+ +KGAIN +T  L
Sbjct: 115 MVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTL 172

Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A +     I VNA+ P  + T ++   L+D ++++Y   I  +   R  E  +I+   AF
Sbjct: 173 AKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTI--SAFNRLGEVEDIADTAAF 230

Query: 243 LCLPAASYITGQVISIDGG 261
           L  P + ++TGQ+I + GG
Sbjct: 231 LASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  113 bits (284), Expect = 2e-30
 Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 15/225 (6%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            ALVTG +RGIG  I   LAR G  V    R+     E +    + G  V     D    
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNP----EDLAALSASGGDVEAVPYDARDP 57

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           +    L++ +   F G++++LV+NA +       E +  E  +  S NV +   L +   
Sbjct: 58  EDARALVDALRDRF-GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P L+ +G+  +VF++S++G   +   + Y+ASK A+  L   L  E     +RV+AV P 
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPG 176

Query: 200 AVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
            V+T ++          + + L+   P     +P +I+ LV  + 
Sbjct: 177 FVDTPMA----------QGLTLVGAFPPEEMIQPKDIANLVRMVI 211

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  111 bits (280), Expect = 2e-30
 Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 8/171 (4%)

Query: 20  TALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQN--MINERIQEWESKGFKVTGSVCDL 76
           T L+TGGT G+G A+   LA  GA  +    R        E + E E+ G +VT + CD+
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61

Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           +  D    L+  + +   G L+ +V+NA ++      E T E +  V++  V  +++L +
Sbjct: 62  ADRDALAALLAALPAAL-GPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120

Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           L   L       + V  SSVAG +  P  + YAA+  A++ L ++   E  
Sbjct: 121 LTRDL----DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 4e-30
 Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 32/272 (11%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L+G   +VTGG+ GIG AIV+EL   GA+V         +N  I   + +         
Sbjct: 6   NLQGKIIIVTGGSSGIGLAIVKELLANGANV---------VNADIHGGDGQHENYQFVPT 56

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA-----LVVMKRAT--EYTLEE--YSSVMS 125
           D+S  ++    +  +   F G+++ LVNNA      L+V ++    +Y L E  +  + +
Sbjct: 57  DVSSAEEVNHTVAEIIEKF-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFN 115

Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            N +  + + Q     +    +  IV MSS AG       S YAA+K A+N  T++ A E
Sbjct: 116 INQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKE 175

Query: 186 WATDSIRVNAVSPWAVN-TQISPPDLNDLL-------VQE----YVKLIAKTPLARSAEP 233
               +IRV  V+P  +  T +  P+  + L       V++    Y K     PL RS + 
Sbjct: 176 LGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTST-IPLGRSGKL 234

Query: 234 NEISPLVAFLCLPAASYITGQVISIDGGYTAG 265
           +E++ LV +L    ASYITG   +I GG T G
Sbjct: 235 SEVADLVCYLLSDRASYITGVTTNIAGGKTRG 266

Length = 266

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  113 bits (284), Expect = 4e-30
 Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 2/199 (1%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVC 74
           ++G TAL+TG + GIG  + ++LAR G ++    R ++ +    +E E K G +V     
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DLS  +  E+L + +     G +++LVNNA         E +L+E   ++  N+ +   L
Sbjct: 64  DLSDPEALERLEDELKERG-GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRL 122

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +   P +   G   I+ + S AG I  P ++ Y+A+K  +   ++ L  E     ++V 
Sbjct: 123 TKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVT 182

Query: 195 AVSPWAVNTQISPPDLNDL 213
           AV P    T+      +D+
Sbjct: 183 AVCPGPTRTEFFDAKGSDV 201

Length = 265

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  112 bits (282), Expect = 6e-30
 Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 18/258 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G   +VTG  +GIG  + E LA  GA V    R + +++E + E  + G        D
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSE-LVHEVLAEILAAGDAAHVHTAD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           L      + ++      F G++++L+NN    +  K    Y  E+  + +  ++  +   
Sbjct: 61  LETYAGAQGVVRAAVERF-GRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWC 119

Query: 135 CQLAHPLLKASGNASIVFMSSVA--GAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           C+   P +       IV +SS+A  G   IP    Y+A+KG +N LT +LA E A D IR
Sbjct: 120 CRAVLPHMLERQQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTASLAFEHARDGIR 175

Query: 193 VNAVSPWAVNTQI--------SPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFL 243
           VNAV+P                  +   +  Q  V + +  + + R    +E    + FL
Sbjct: 176 VNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAILFL 235

Query: 244 CLPAASYITGQVISIDGG 261
               ASYITG V+ + GG
Sbjct: 236 ASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  111 bits (281), Expect = 1e-29
 Identities = 60/205 (29%), Positives = 85/205 (41%), Gaps = 21/205 (10%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW---ESKGFKVTGSVC 74
           G   ++TG   GIG     ELA+ GA V    R++    E        E+   KV     
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKG-EEAAAEIKKETGNAKVEVIQL 59

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DLS      +  E   + F  +L+IL+NNA   +M      T + +    + N    + L
Sbjct: 60  DLSSLASVRQFAEEFLARFP-RLDILINNAG--IMAPPRRLTKDGFELQFAVNYLGHFLL 116

Query: 135 CQLAHPLLKASGNASIVFMSSVA---GAISIPRLS-----------AYAASKGAINQLTK 180
             L  P+LKAS  + IV +SS+A   G I    L            AY  SK A    T+
Sbjct: 117 TNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTR 176

Query: 181 NLACEWATDSIRVNAVSPWAVNTQI 205
            LA       + VNA+ P  V T++
Sbjct: 177 ELARRLEGTGVTVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 1e-29
 Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 24/261 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+G   +V+G   G+G  +    AR GA V    R    ++E   E +  G +      D
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHL 134
           ++  DQ   L+      F G+++ LVNNA  V  MK   +     + +V+  NV  +  L
Sbjct: 63  ITDEDQCANLVALALERF-GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRL 121

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q   P L  SG  SIV ++S+    S P+  AY  +KGA+   +++LA E     IRVN
Sbjct: 122 TQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVN 180

Query: 195 AVSP---WAVNTQ-----------ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           +V+P   W    +           ++   +       Y +  A + L R    +E++  V
Sbjct: 181 SVAPGYIWGDPLKGYFRHQAGKYGVTVEQI-------YAETAANSDLKRLPTDDEVASAV 233

Query: 241 AFLCLPAASYITGQVISIDGG 261
            FL    A  ITGQ + ++ G
Sbjct: 234 LFLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score =  111 bits (278), Expect = 2e-29
 Identities = 83/255 (32%), Positives = 130/255 (50%), Gaps = 12/255 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGS 72
           +L G  ALVTG +RGIG AI   LA  GA  ++H  GR++   +E I+E ES G K    
Sbjct: 3   NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHY-GRNKQAADETIREIESNGGKAFLI 61

Query: 73  VCDLSFGDQREKLIETVSS-----VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
             DL+  D  +KL+E + +     V   +++ILVNNA +         T E +  +M+ N
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVN 121

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           +++ + L Q   PLL+A G   ++ +SS    +      AY  SKGA+N +T  LA    
Sbjct: 122 IKAPFFLIQQTLPLLRAEGR--VINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLG 179

Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
              I VN + P    T I+   L+D  ++ +      +   R  +  +I+  VAFL    
Sbjct: 180 ERGITVNTIMPGYTKTDINAKLLDDPEIRNFAT--NSSVFGRIGQVEDIADAVAFLASSD 237

Query: 248 ASYITGQVISIDGGY 262
           + ++TGQ+I + GG+
Sbjct: 238 SRWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  111 bits (278), Expect = 2e-29
 Identities = 77/251 (30%), Positives = 126/251 (50%), Gaps = 13/251 (5%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERI-QEWESKGFKVTGSV 73
            L G  A+VTGG +GIG AI   LA+ GA V           E +  E   +G  V    
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+S  +   +L+E   + F GK++ILVNNA +   +   +   E++  V+  N+ S ++
Sbjct: 63  ADVSKVEDANRLVEEAVNHF-GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFN 121

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
                 P +  +    I+ +SS+ G       + Y+A+K  +   TK+LA E A  ++ V
Sbjct: 122 TTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTV 181

Query: 194 NAVSPWAVNTQIS---PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           NA+ P  ++T++    P ++         K++AK P  R  + +EI+  V +LC   A Y
Sbjct: 182 NAICPGFIDTEMVAEVPEEVRQ-------KIVAKIPKKRFGQADEIAKGVVYLCRDGA-Y 233

Query: 251 ITGQVISIDGG 261
           ITGQ ++I+GG
Sbjct: 234 ITGQQLNINGG 244

Length = 247

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  110 bits (278), Expect = 3e-29
 Identities = 77/252 (30%), Positives = 117/252 (46%), Gaps = 15/252 (5%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG  +GIG+AI + L   G  V     ++        +    G K      D+S  D
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64

Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           Q    +  V   F G LN++VNNA +         T E++  V + NV       Q A  
Sbjct: 65  QVFAAVRQVVDTF-GDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123

Query: 141 LLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
             K  G+   I+  +S AG +  P L+ Y+++K A+  LT+  A + A++ I VNA +P 
Sbjct: 124 AFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPG 183

Query: 200 AVNT--------QISPPDLNDLL--VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            V T        Q+           ++++ K I    L R +EP +++  V+FL  P + 
Sbjct: 184 IVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDIT---LGRLSEPEDVANCVSFLAGPDSD 240

Query: 250 YITGQVISIDGG 261
           YITGQ I +DGG
Sbjct: 241 YITGQTIIVDGG 252

Length = 256

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  110 bits (277), Expect = 3e-29
 Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 13/259 (5%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESKGFK-- 68
           + + L G  A VTG   GIG  I   LA+ GA V     R  + + E  +  E+ G +  
Sbjct: 2   QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAI 61

Query: 69  -VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
            +   V   +  D R  +  T + +  G L + VN A +     A E   E++ +VM  N
Sbjct: 62  QIAADVTSKA--DLRAAVARTEAEL--GALTLAVNAAGIANANPAEEMEEEQWQTVMDIN 117

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL--SAYAASKGAINQLTKNLACE 185
           +   +  CQ     +  +G  SIV ++S++G I    L  + Y ASK  +  L+K+LA E
Sbjct: 118 LTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAME 177

Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
           W    IRVN++SP    T   P +    +V +      +TP+ R A+ +E+     FL  
Sbjct: 178 WVGRGIRVNSISPGYTAT---PMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLS 234

Query: 246 PAASYITGQVISIDGGYTA 264
            AAS+ TG  + +DGG+  
Sbjct: 235 DAASFCTGVDLLVDGGFVC 253

Length = 254

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 6e-29
 Identities = 75/260 (28%), Positives = 121/260 (46%), Gaps = 17/260 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE--WESKGFKVTGSV 73
           L G  A+VTGG+ GIG A VE L   GASV  CGRD+  +         +  G ++  + 
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CD+            V + F G +++LVNNA    +    + T + +   +     S  +
Sbjct: 66  CDVLDEADVAAFAAAVEARF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVIN 124

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
             +   PLL+AS  ASIV ++S+      P + A +A++  +  L K+LA E A   +RV
Sbjct: 125 PTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRV 184

Query: 194 NAVSPWAVNT--------QISPPDLNDLLVQEYVKLIAKT---PLARSAEPNEISPLVAF 242
           N++    V +          + P  +    + +   +A+    PL R   P+E +  + F
Sbjct: 185 NSILLGLVESGQWRRRYEARADPGQS---WEAWTAALARKKGIPLGRLGRPDEAARALFF 241

Query: 243 LCLPAASYITGQVISIDGGY 262
           L  P +SY TG  I + GG+
Sbjct: 242 LASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  109 bits (273), Expect = 7e-29
 Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 6/191 (3%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG +RGIG A    L   G  V  C RD+  +     +   +   V G   D+    
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQ---ELEGVLGLAGDVRDEA 59

Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
              + ++ +   F G L+ LVNNA + VMK   E T EE+  V+ TN+  +++    A P
Sbjct: 60  DVRRAVDAMEEAFGG-LDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118

Query: 141 LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA 200
            L   G  +IV + S+AG  +    +AY ASK  +  L++    +    +IRV  V P +
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGS 178

Query: 201 VNTQI--SPPD 209
           V+T    SP  
Sbjct: 179 VDTGFAGSPEG 189

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  109 bits (275), Expect = 8e-29
 Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 8/199 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   ++TG + GIG  +   LAR GA +    R     + + +E ++        V  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
            + DL      E+++E    +F G L+IL+NNA + +     + +++    +M  N    
Sbjct: 61  DMSDLED---AEQVVEEALKLF-GGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGP 116

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L + A P L      SIV +SS+AG I +P  +AYAASK A+     +L  E +  +I
Sbjct: 117 VALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNI 176

Query: 192 RVNAVSPWAVNTQISPPDL 210
            V  V P  ++T I+   L
Sbjct: 177 SVTVVCPGLIDTNIAMNAL 195

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  109 bits (274), Expect = 1e-28
 Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 17/254 (6%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSF 78
            A+VTG +RGIG AI  ELA  G  +      D +   E + E  + G +      D+  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNVESSYHLCQ 136
               E L++     F G+L+ LVNNA + V  R    + T + +  +++ N+   + L Q
Sbjct: 63  LSDHEALLDQAWEDF-GRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQ 121

Query: 137 ------LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
                 +  P      + SI+F++S+   +  P    Y  SK  ++  T+ LA   A + 
Sbjct: 122 AVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEG 181

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK--TPLARSAEPNEISPLVAFLCLPAA 248
           I V+ + P  ++T ++ P     + ++Y +LIA    P+ R  +P +I+  V  L     
Sbjct: 182 IAVHEIRPGLIHTDMTAP-----VKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLASGLL 236

Query: 249 SYITGQVISIDGGY 262
            Y TGQ I+IDGG 
Sbjct: 237 PYSTGQPINIDGGL 250

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score =  109 bits (274), Expect = 1e-28
 Identities = 78/263 (29%), Positives = 116/263 (44%), Gaps = 24/263 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVC 74
           L G   L+TG ++GIG A  E  A  G  +H   RD + +     +  +  G  V     
Sbjct: 5   LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DLS  + RE+L         G ++ILVNNA  +      +     + +     V     L
Sbjct: 65  DLSSPEAREQLAAEA-----GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDL 119

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG--AINQLTKNLACEWATDSIR 192
            +LA+P +KA G+  IV +   AG    P       S G  A+   T+ L  +   D +R
Sbjct: 120 TRLAYPRMKARGSGVIVNVIGAAG--ENPDADYICGSAGNAALMAFTRALGGKSLDDGVR 177

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQE----------YVKLIAKTPLARSAEPNEISPLVAF 242
           V  V+P  V T      +  LL             + +L+A  PL R A P E++ LVAF
Sbjct: 178 VVGVNPGPVATD----RMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAF 233

Query: 243 LCLPAASYITGQVISIDGGYTAG 265
           L  P + Y +G V+++DGG +A 
Sbjct: 234 LASPRSGYTSGTVVTVDGGISAR 256

Length = 259

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  108 bits (273), Expect = 2e-28
 Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 41/268 (15%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  ALVTGGT+GIG A V  L   GA V T  R +    + + E       V     D
Sbjct: 7   LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR---PDDLPE------GVEFVAAD 57

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNN-----------AALVVMKRATEYTLEEYSSVM 124
           L+  +    +   V     G ++ILV+            AAL         T EE+   +
Sbjct: 58  LTTAEGCAAVARAVLERL-GGVDILVHVLGGSSAPAGGFAAL---------TDEEWQDEL 107

Query: 125 STNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR-LSAYAASKGAINQLTKNLA 183
           + N+ ++  L +   P + A G+  I+ ++S+   + +P   +AYAA+K A++  +K+L+
Sbjct: 108 NLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLS 167

Query: 184 CEWATDSIRVNAVSPWAVNTQISP------PDLNDLLVQEYVKLIAKT----PLARSAEP 233
            E A   +RVN VSP  + T+ +        +      +   ++I  +    PL R AEP
Sbjct: 168 KEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEP 227

Query: 234 NEISPLVAFLCLPAASYITGQVISIDGG 261
            E++ L+AFL    A+ ITG    IDGG
Sbjct: 228 EEVAELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  108 bits (271), Expect = 2e-28
 Identities = 83/253 (32%), Positives = 122/253 (48%), Gaps = 13/253 (5%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVH----TCGRDQNMINERIQEWESKG--FKVTGSVC 74
           A +TG   G+G AI   +A  GA V           +     I     +G  F     V 
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D     Q + L+   +    G L++LVNNA +       +  L+E+  VM+ NVES +  
Sbjct: 62  D---EAQWQALLAQAADAMGG-LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLG 117

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD--SIR 192
           C+ A P L+AS  ASIV +SSVA   + P  +AY ASK A+  LTK++A + A     +R
Sbjct: 118 CKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVR 177

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
            N++ P  + T I  P    L  +E   KL    PL R  EP++++  V +L    + ++
Sbjct: 178 CNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFV 237

Query: 252 TGQVISIDGGYTA 264
           TG  + IDGG  A
Sbjct: 238 TGAELVIDGGICA 250

Length = 251

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  107 bits (269), Expect = 4e-28
 Identities = 79/245 (32%), Positives = 124/245 (50%), Gaps = 12/245 (4%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           ALVTGG  GIG AI + LA+ G  V   CG ++      +QE  + GF       D+S  
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF 62

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           +  +  +  V +   G +++LVNNA +       + T E++S+V+ TN+ S +++ Q   
Sbjct: 63  ESCKAAVAKVEAEL-GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVI 121

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
             ++  G   I+ +SSV G       + Y+A+K  +   TK LA E AT  + VN +SP 
Sbjct: 122 DGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPG 181

Query: 200 AVNTQIS---PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI 256
            + T +      D+ +        ++A+ P+ R   P EI+  VAFL    A YITG  +
Sbjct: 182 YIATDMVMAMREDVLN-------SIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATL 234

Query: 257 SIDGG 261
           SI+GG
Sbjct: 235 SINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  107 bits (268), Expect = 4e-28
 Identities = 78/246 (31%), Positives = 110/246 (44%), Gaps = 9/246 (3%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G  A+VTGG  GIG  I  +    G  V     D+    +  +      F V G V D +
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADET 60

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
                + ++  +     G++++LVNNAA       +   LEE+  ++S N+   Y L + 
Sbjct: 61  ---LVKFVVYAMLEKL-GRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRY 116

Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
               L       I+ ++S     S P   AYAASKG +  LT  LA     D IRVN +S
Sbjct: 117 CRDELIK-NKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCIS 174

Query: 198 PWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
           P  +NT          L QE     A+ P  R   P +I+ LV FLC   A +ITG+   
Sbjct: 175 PGWINTTEQQEFTAAPLTQEDH---AQHPAGRVGTPKDIANLVLFLCQQDAGFITGETFI 231

Query: 258 IDGGYT 263
           +DGG T
Sbjct: 232 VDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  107 bits (269), Expect = 5e-28
 Identities = 78/253 (30%), Positives = 111/253 (43%), Gaps = 26/253 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM------------INERIQEWE 63
           L G  A VTG +RGIG AI   LA+ GA+V    +  +             I E  +E E
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 64  SKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV 123
           + G +    V D+   DQ   L+E     F G+L+ILVNNA  + +    +   + +  +
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQF-GRLDILVNNAGAIWLSLVEDTPAKRFDLM 119

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
              N+  +Y L Q A P +  +G   I+ +S            AYAA K  +++LT  LA
Sbjct: 120 QRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLA 179

Query: 184 CEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV-AF 242
            E     I VN++ P   +T I  P   +L         +    ARS  P  +S  V A 
Sbjct: 180 AELRRHGIAVNSLWP---STAIETPAATELSGG------SDPARARS--PEILSDAVLAI 228

Query: 243 LCLPAASYITGQV 255
           L  PAA   TG V
Sbjct: 229 LSRPAAER-TGLV 240

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  107 bits (269), Expect = 5e-28
 Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 18/258 (6%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           +SL G  A+VTG   G+G  +   LA  G  +   G +     E I++  + G +     
Sbjct: 6   FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDI--VGINIVEPTETIEQVTALGRRFLSLT 63

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DL   D    L+E   + F G ++ILVNNA L+  + A E++ +++  VM+ N++S + 
Sbjct: 64  ADLRKIDGIPALLERAVAEF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFF 122

Query: 134 LCQLAHPLLKASGNA----SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           + Q A     A GN     +I  M S  G I +P   +Y ASK  +  +T+ +A EWA  
Sbjct: 123 MSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVP---SYTASKSGVMGVTRLMANEWAKH 179

Query: 190 SIRVNAVSPWAV---NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
           +I VNA++P  +   NTQ    D      Q   +++ + P  R   P+++   V FL   
Sbjct: 180 NINVNAIAPGYMATNNTQQLRAD-----EQRSAEILDRIPAGRWGLPSDLMGPVVFLASS 234

Query: 247 AASYITGQVISIDGGYTA 264
           A+ YI G  I++DGG+ A
Sbjct: 235 ASDYINGYTIAVDGGWLA 252

Length = 253

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  106 bits (268), Expect = 5e-28
 Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 5/185 (2%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK----GFKVTGSV 73
           G   L+TGG+ GIG A+ +EL + GA+V    R ++ + E ++E E++    G KV+   
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DLS  ++ E+          G  +++VN A + +     + T EE+   M  N   S +
Sbjct: 61  ADLSDYEEVEQAFAQAVEKG-GPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLN 119

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           +     PL+K      IVF+SS A  + I   SAY  SK A+  L ++L  E    +IRV
Sbjct: 120 VAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRV 179

Query: 194 NAVSP 198
           + V P
Sbjct: 180 SVVYP 184

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 7e-28
 Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 13/257 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSV 73
           L G  ALVTG  +GIG AI    AR GA+V     D  +             G +V    
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D++        +      F G L++LVNNA + V       T E++    + +++ +++
Sbjct: 65  ADVTDAASVAAAVAAAEEAF-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWN 123

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            C+   P +   G  SIV ++S      IP    Y  +K  +  LT+ L  E+A  ++RV
Sbjct: 124 GCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRV 183

Query: 194 NAVSPWAVNTQI------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
           NA++P  + TQ+      + PD       E + L    P+ R   P E++    FL    
Sbjct: 184 NAIAPGYIETQLTEDWWNAQPD-PAAARAETLAL---QPMKRIGRPEEVAMTAVFLASDE 239

Query: 248 ASYITGQVISIDGGYTA 264
           A +I    I+IDGG + 
Sbjct: 240 APFINATCITIDGGRSV 256

Length = 260

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  105 bits (265), Expect = 2e-27
 Identities = 78/255 (30%), Positives = 127/255 (49%), Gaps = 19/255 (7%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGAS--VHTCGRDQNMINERIQEWESKGFKVTG 71
           +SL+    +VTG  RGIG AI   LA+ G+   V+   R + M NE ++  +  G +  G
Sbjct: 2   YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEM-NETLKMVKENGGEGIG 60

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK---RATEYTLEEYSSVMSTNV 128
            + D+S  +  E L +     +    +ILVNNA L +        +  ++++   +ST+ 
Sbjct: 61  VLADVSTREGCETLAKATIDRYGV-ADILVNNAGLGLFSPFLNVDDKLIDKH---ISTDF 116

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           +S  +  Q     ++  G  +IV ++SVAG      LS Y A K A+  LTK LA E A 
Sbjct: 117 KSVIYCSQELAKEMREGG--AIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP 174

Query: 189 DSIRVNAVSPWAVNTQI--SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
             IRVNA++P  V T++  S   +  +  +E+ +    T + +  +P E++  VA +   
Sbjct: 175 -KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE--KFTLMGKILDPEEVAEFVAAIL-- 229

Query: 247 AASYITGQVISIDGG 261
               ITGQV  +D G
Sbjct: 230 KIESITGQVFVLDSG 244

Length = 252

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  106 bits (266), Expect = 2e-27
 Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 24/260 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+G  AL+TG   GIG A+ E     GA V               E       V+  V  
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR 63

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
               D  ++++      F G ++IL NNAAL  M    + + + Y  + + NV+  + L 
Sbjct: 64  Q---DSIDRIVAAAVERF-GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLM 119

Query: 136 Q-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           Q +A  +++      I+ M+S AG      +S Y A+K A+   T++ A       I VN
Sbjct: 120 QAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVN 179

Query: 195 AVSPWAVNTQI-------------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA 241
           A++P  V+T +              PP     LV E V      PL R   P++++ +  
Sbjct: 180 AIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAV------PLGRMGVPDDLTGMAL 233

Query: 242 FLCLPAASYITGQVISIDGG 261
           FL    A YI  Q  ++DGG
Sbjct: 234 FLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  105 bits (264), Expect = 2e-27
 Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 16/254 (6%)

Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE--WESKGFKVTGSVCDLSFG 79
           L+TGG  G+G A    LA+ GA +     ++  +          +   +V     D+S  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATE-YTLEEYSSVMSTNVESSYHLCQLA 138
            Q E  ++     F G+++   NNA +   +  TE +  +E+  V+S N+   ++  +  
Sbjct: 67  AQVEAYVDATVEQF-GRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKV 125

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
             +++  G+  IV  +SV G   +   S YAA+K  +  LT+N A E+    IR+NA++P
Sbjct: 126 LKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAP 185

Query: 199 WAVNT--------QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
            A+ T        Q+ P +  +   +     ++  P+ R  EP E++ +VAFL    A Y
Sbjct: 186 GAILTPMVEGSLKQLGPENPEEAGEE----FVSVNPMKRFGEPEEVAAVVAFLLSDDAGY 241

Query: 251 ITGQVISIDGGYTA 264
           +   V+ IDGG + 
Sbjct: 242 VNAAVVPIDGGQSY 255

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  105 bits (263), Expect = 3e-27
 Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 22/255 (8%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
            +VTG  +GIG A+   L + GA+V     D              G  +  +  D++   
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATV--IALDLPF-----VLLLEYGDPLRLTPLDVADAA 53

Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
              ++   + +   G ++ LVN A ++        + E++    + NV   ++L Q   P
Sbjct: 54  AVREVCSRLLAE-HGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAP 112

Query: 141 LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA 200
            +K     +IV ++S A  +    ++AY ASK A+  L+K L  E A   +R N VSP +
Sbjct: 113 HMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGS 172

Query: 201 VNTQISPPDLNDLLVQEY--VKLIAKT--------PLARSAEPNEISPLVAFLCLPAASY 250
            +T         L   E    ++IA          PL + A+P +I+  V FL    A +
Sbjct: 173 TDT----AMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGH 228

Query: 251 ITGQVISIDGGYTAG 265
           IT   + +DGG T G
Sbjct: 229 ITMHDLVVDGGATLG 243

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 3e-27
 Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 27/248 (10%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           T LVTG T+GIG A+   LA  G  V    R                F      CDL+  
Sbjct: 5   TVLVTGATKGIGLALSLRLANLGHQVIGIARSA-----------IDDFPGELFACDLADI 53

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           +Q    +  ++      ++ +VNN  + + +   +  L     V   NV ++  + Q   
Sbjct: 54  EQTAATLAQINE--IHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFL 111

Query: 140 PLLKASGNASIVFMSSVA--GAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
             +K      IV + S A  GA      ++Y+A+K A+   T+  A E A   I VNAV+
Sbjct: 112 EGMKLREQGRIVNICSRAIFGA---LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVA 168

Query: 198 PWAVNT----QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           P  + T    Q  P        +E  +++A  P+ R   P E++  +AFL    A +ITG
Sbjct: 169 PGPIETELFRQTRPVG-----SEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITG 223

Query: 254 QVISIDGG 261
           QV+ +DGG
Sbjct: 224 QVLGVDGG 231

Length = 234

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  104 bits (262), Expect = 4e-27
 Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 1/192 (0%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+G  AL+TG  RGIG A+   LA+ G +V    R +  +    +E E+ G KV  +  
Sbjct: 4   SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATA 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+S  ++    IE + +   G ++IL+NNA +    +  E    E+  ++  N+   Y+ 
Sbjct: 64  DVSDYEEVTAAIEQLKNEL-GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYA 122

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +   P +    +  I+ +SS AG       SAY+ASK  +  LT++L  E    +IRV 
Sbjct: 123 TRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVT 182

Query: 195 AVSPWAVNTQIS 206
           A++P  V T ++
Sbjct: 183 ALTPSTVATDMA 194

Length = 239

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 6e-27
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 5/249 (2%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           +SL G   L+TG  +GIG+ +   LA +GA +             + +   +G K   + 
Sbjct: 5   FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAP 64

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            +++   + E  IE +     G +++L+NNA +      TE+  +E++ V++ N  + + 
Sbjct: 65  FNVTHKQEVEAAIEHIEKDI-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFL 123

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           + Q     +       I+ + S+   +    ++ YAASKGA+  LT+ +  E A  +I+V
Sbjct: 124 VSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQV 183

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           N ++P    T+++   + D   + +   L  +TP AR  +P E+     FL   A+ ++ 
Sbjct: 184 NGIAPGYFKTEMTKALVED---EAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVN 240

Query: 253 GQVISIDGG 261
           G ++ +DGG
Sbjct: 241 GHLLFVDGG 249

Length = 254

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score =  104 bits (261), Expect = 6e-27
 Identities = 82/248 (33%), Positives = 117/248 (47%), Gaps = 10/248 (4%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
            ALVTGG+RGIG A    LA+ G +V     ++ +   E +      G K      D+S 
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD 62

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATE-YTLEEYSSVMSTNVESSYHLCQL 137
            +Q   +   +    D  L  LVNNA ++  +   E  T E  + V+STNV   +  C+ 
Sbjct: 63  ENQVVAMFTAIDQH-DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCRE 121

Query: 138 A--HPLLKASGNA-SIVFMSSVAGAISIP-RLSAYAASKGAINQLTKNLACEWATDSIRV 193
           A     LK  G+  +IV +SS A  +  P     YAASKGAI+ LT  L+ E A   IRV
Sbjct: 122 AVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRV 181

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N V P  + T++         V      I   P+ R  +P E++  + +L    ASY+TG
Sbjct: 182 NCVRPGFIYTEMHASGGEPGRVDRVKSNI---PMQRGGQPEEVAQAIVWLLSDKASYVTG 238

Query: 254 QVISIDGG 261
             I + GG
Sbjct: 239 SFIDLAGG 246

Length = 247

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score =  103 bits (259), Expect = 8e-27
 Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 27/255 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGSVC 74
             G   LV GG+RGIG AIV      GA+V  T    ++      QE        TG+  
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE--------TGATA 55

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
             +    R+ +I+ V     G L+ILV NA + V   A E   ++   +   N+ + YH 
Sbjct: 56  VQTDSADRDAVIDVVRK--SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHA 113

Query: 135 CQLAHPLLKASGNASIVFMSSVAG-AISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
              A   +   G   I+ + SV G  + +  ++AYAASK A+  + + LA ++    I +
Sbjct: 114 SVEAARQMPEGGR--IIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITI 171

Query: 194 NAVSPWAVNTQISPPD--LNDLLVQEYVKLIAKTPLA--RSAEPNEISPLVAFLCLPAAS 249
           N V P  ++T  +P +  + D++          + +A  R   P E++ +VA+L  P AS
Sbjct: 172 NVVQPGPIDTDANPANGPMKDMM---------HSFMAIKRHGRPEEVAGMVAWLAGPEAS 222

Query: 250 YITGQVISIDGGYTA 264
           ++TG + +IDG + A
Sbjct: 223 FVTGAMHTIDGAFGA 237

Length = 237

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  102 bits (257), Expect = 2e-26
 Identities = 66/255 (25%), Positives = 103/255 (40%), Gaps = 22/255 (8%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
             LVTG +RG+G AI    AR GA V     R          E   +   +   V D   
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRD--- 58

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAAL------VVMKRATEYTLEEYSSVMSTNVESSY 132
            DQ + +IE   + F G ++ +VNNA +         K       E+Y   +   V+ + 
Sbjct: 59  RDQVQAMIEEAKNHF-GPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           +L Q   P  K  G+  ++ + +      +     Y  +K A+   T+N+A E     I 
Sbjct: 118 NLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGIT 177

Query: 193 VNAVSPWAVNT----QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           VN VS   +        +P ++ D +          TPL +   P +I+  V F   P A
Sbjct: 178 VNMVSGGLLKVTDASAATPKEVFDAI-------AQTTPLGKVTTPQDIADAVLFFASPWA 230

Query: 249 SYITGQVISIDGGYT 263
             +TGQ + +DGG  
Sbjct: 231 RAVTGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  102 bits (257), Expect = 2e-26
 Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 14/214 (6%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER-IQEWESKGFKVTGSVCDLSFG 79
           A++TGG  GIG A  + L + GA V    R++N      +Q    K  K T   CD++  
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKV-KATFVQCDVTSW 61

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS--VMSTNVESSYHLCQL 137
           +Q     +     F G+++IL+NNA ++  K               +  N+    +   L
Sbjct: 62  EQLAAAFKKAIEKF-GRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 138 AHPLLKAS---GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD-SIRV 193
           A   +  +       IV + SVAG    P+   Y+ASK  +   T++LA        +RV
Sbjct: 121 ALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRV 180

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL 227
           NA+ P   NT + P      LV +  +++   P 
Sbjct: 181 NAICPGFTNTPLLPD-----LVAKEAEMLPSAPT 209

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  102 bits (257), Expect = 3e-26
 Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 28/261 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+    ++TGG +G+G A+ E LA+ GA +     +Q  + E + E  + G +V G   +
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKR---ATEYTLEEYSSVMST 126
           ++  +  E     ++  F G+LN L+NNA       LV  K     ++ +LE++ SV+  
Sbjct: 63  VTDEEDVEATFAQIAEDF-GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDV 121

Query: 127 NVESSYHLC--QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLAC 184
           N+   + LC  + A  ++++     I+ +SS+A A ++ + + Y+ASK  +  +T   A 
Sbjct: 122 NLTGVF-LCGREAAAKMIESGSKGVIINISSIARAGNMGQ-TNYSASKAGVAAMTVTWAK 179

Query: 185 EWATDSIRVNAVSPWAVNT----QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           E A   IRV A++P  + T     + P  L         +L    P+ R  EP EI+  V
Sbjct: 180 ELARYGIRVAAIAPGVIETEMTAAMKPEALE--------RLEKMIPVGRLGEPEEIAHTV 231

Query: 241 AFLCLPAASYITGQVISIDGG 261
            F+      Y+TG+V+ IDGG
Sbjct: 232 RFII--ENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 3e-26
 Identities = 81/255 (31%), Positives = 118/255 (46%), Gaps = 16/255 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A++TGG  GIG A    LA  GA+V   G       +   + E  G  V   V D
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATV-VVGDIDPEAGKAAAD-EVGGLFVPTDVTD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNVESSYH 133
               D    L +T +  + G ++I  NNA +   +  +     L+ +  V   N+ S Y 
Sbjct: 63  ---EDAVNALFDTAAETY-GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYL 118

Query: 134 LCQLAHPLLKASGNASIVFMSS-VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
            C+ A P +   G  SI+  +S VA   S     +Y ASKG +  +++ L  ++A   IR
Sbjct: 119 CCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIR 178

Query: 193 VNAVSPWAVNTQISPPDLNDLLV---QEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           VNA+ P  VNT    P L +L     +   + +   P+ R AEP EI+  VAFL    AS
Sbjct: 179 VNALCPGPVNT----PLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDAS 234

Query: 250 YITGQVISIDGGYTA 264
           +IT     +DGG + 
Sbjct: 235 FITASTFLVDGGISG 249

Length = 255

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 4e-26
 Identities = 67/189 (35%), Positives = 94/189 (49%), Gaps = 3/189 (1%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G   ++TG + GIG A+   LAR GA +    R++  +    QE    G +      D+S
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYT-LEEYSSVMSTNVESSYHLCQ 136
             +  E+LIE   + F G ++ILVNNA + +  R  E T L  +  VM  N   + +   
Sbjct: 61  DAEACERLIEAAVARF-GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTH 119

Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
            A P LKAS    IV +SS+AG   +P  S YAASK A++    +L  E A D + V  V
Sbjct: 120 AALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVV 178

Query: 197 SPWAVNTQI 205
            P  V T I
Sbjct: 179 CPGFVATDI 187

Length = 263

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score =  101 bits (254), Expect = 5e-26
 Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 9/189 (4%)

Query: 21  ALVTGGTRGIGYAIVEEL-ARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            L+TG +RGIG  +V +L AR   +V    RD +   E +    +   ++   + +L   
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATE-LAALGASHSRLH--ILELDVT 57

Query: 80  DQREKLIETVSSVF-DGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQL 137
           D+  +  E V+    D  L++L+NNA ++     A+E   E+   V   NV     L Q 
Sbjct: 58  DEIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQA 117

Query: 138 AHPLLKASGNASIVFMSSVAGAIS-IPRLS--AYAASKGAINQLTKNLACEWATDSIRVN 194
             PLL     A I+ +SS  G+I         +Y ASK A+N LTK+LA E   D I V 
Sbjct: 118 FLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGITVV 177

Query: 195 AVSPWAVNT 203
           ++ P  V T
Sbjct: 178 SLHPGWVRT 186

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  101 bits (254), Expect = 6e-26
 Identities = 69/259 (26%), Positives = 117/259 (45%), Gaps = 28/259 (10%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G+ A+VTGG  G+G A VE L   GA V       N   E + +       V   V    
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDL-PNSPGETVAKLGDNCRFVPVDVTS-- 58

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVV------MKRATEYTLEEYSSVMSTNVESS 131
                +  +    + F G+L+I+VN A + V       K    ++LE +  V++ N+  +
Sbjct: 59  -EKDVKAALALAKAKF-GRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGT 116

Query: 132 YHLCQLAHPLL-KASGNAS-----IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
           +++ +LA   + K   +       I+  +SVA        +AY+ASKG I  +T  +A +
Sbjct: 117 FNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARD 176

Query: 186 WATDSIRVNAVSPWAVNTQI--SPPDLNDLLVQEYVKLIAKTP-LARSAEPNEISPLVAF 242
            A   IRV  ++P   +T +    P+     V+++  L  + P  +R  +P E + LV  
Sbjct: 177 LAPQGIRVVTIAPGLFDTPLLAGLPE----KVRDF--LAKQVPFPSRLGDPAEYAHLVQH 230

Query: 243 LCLPAASYITGQVISIDGG 261
           +      Y+ G+VI +DG 
Sbjct: 231 IIE--NPYLNGEVIRLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  102 bits (255), Expect = 7e-26
 Identities = 82/263 (31%), Positives = 117/263 (44%), Gaps = 17/263 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  ALVTGG  GIG +IV    + GA V       ++          +   V    CD
Sbjct: 16  LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEP-NVCFFHCD 74

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK----RATEYTLEEYSSVMSTNVESS 131
           ++  D   + ++     F G L+I+VNNA L        R  E  L E+  V   NV+  
Sbjct: 75  VTVEDDVSRAVDFTVDKF-GTLDIMVNNAGLTGPPCPDIRNVE--LSEFEKVFDVNVKGV 131

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           +   + A  ++      SIV + SVA AI      AY  SK A+  LT+++A E     I
Sbjct: 132 FLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGI 191

Query: 192 RVNAVSPWAVNTQISPPDL------NDLLVQEYVKLIAKTPLARSAE--PNEISPLVAFL 243
           RVN VSP+AV T ++   L       D L   +     K    +  E   ++++  V FL
Sbjct: 192 RVNCVSPYAVPTALALAHLPEDERTEDALA-GFRAFAGKNANLKGVELTVDDVANAVLFL 250

Query: 244 CLPAASYITGQVISIDGGYTAGN 266
               A YI+G  + IDGG+T  N
Sbjct: 251 ASDEARYISGLNLMIDGGFTCTN 273

Length = 280

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score =  100 bits (250), Expect = 2e-25
 Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 16/218 (7%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G T L+TGGT GIG A+  +    G +V   GR +    ER+ E + +   +   V 
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRRE----ERLAEAKKELPNIHTIVL 57

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK----RATEYTLEEYSSVMSTNVES 130
           D+   +  E L E + S +   L+IL+NNA   + +    R     L++  + + TN+  
Sbjct: 58  DVGDAESVEALAEALLSEYP-NLDILINNAG--IQRPIDLRDPASDLDKADTEIDTNLIG 114

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
              L +   P LK    A+IV +SS    + +     Y A+K A++  T  L  +     
Sbjct: 115 PIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTG 174

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA 228
           + V  + P AV+T     +L++           K PL 
Sbjct: 175 VEVVEIVPPAVDT-----ELHEERRNPDGGTPRKMPLD 207

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 2e-25
 Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 22/260 (8%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS--V 73
           L G  ALVTG + G+G    + LA+ GA V    R    + E   E E++G    G+  V
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG----GAAHV 62

Query: 74  CDLSFGDQ---REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
             L   D    +  +    +    G ++ILVNN+ +   ++  + T  ++  V  TN   
Sbjct: 63  VSLDVTDYQSIKAAVAHAETEA--GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRG 120

Query: 131 SYHLCQLAHPLLKASGNAS--------IVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
           ++ + Q     + A    +        I+ ++SVAG   +P++  Y  SK A+  +T+ +
Sbjct: 121 AFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAM 180

Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A EW    I VNA+ P  ++T+I   + +    ++  KL++  P  R  +P ++  L+  
Sbjct: 181 ALEWGRHGINVNAICPGYIDTEI---NHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLL 237

Query: 243 LCLPAASYITGQVISIDGGY 262
           L    + +I G +IS D G+
Sbjct: 238 LAADESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score =  100 bits (250), Expect = 3e-25
 Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 9/197 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKGFKVTGSVC 74
           L G  ALVTG +RGIG  I  +L   GA+V+  GR     +    +E E++G K     C
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNA----ALVVMKRAT---EYTLEEYSSVMSTN 127
           D S  D+ E L E V+    G+L+ILVNNA     L+++  A    E     +  + +  
Sbjct: 61  DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           + + Y     A PL+  +G   IV +SS  G +      AY   K AI+++  ++A E  
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGLIVIISST-GGLEYLFNVAYGVGKAAIDRMAADMAHELK 179

Query: 188 TDSIRVNAVSPWAVNTQ 204
              + V ++ P  V T+
Sbjct: 180 PHGVAVVSLWPGFVRTE 196

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 99.5 bits (248), Expect = 5e-25
 Identities = 75/255 (29%), Positives = 112/255 (43%), Gaps = 26/255 (10%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
            ++TG +RGIG A     A  G +V             + + I+    +   V   V D 
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE 64

Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVVMK-RATEYTLEEYSSVMSTNVESSYHLC 135
           +      +L E V     G+L+ LVNNA ++  + R  +      + + +TNV  S+   
Sbjct: 65  A---DVLRLFEAVDREL-GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCA 120

Query: 136 QLA----HPLLKASGNASIVFMSSVAGAISIP-RLSAYAASKGAINQLTKNLACEWATDS 190
           + A           G A IV +SS+A  +  P     YAASKGAI+ +T  LA E A + 
Sbjct: 121 REAVKRMSTRHGGRGGA-IVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEG 179

Query: 191 IRVNAVSPWAVNTQI----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
           IRVNAV P  + T+I      P   D       ++ A  P+ R     E++  + +L   
Sbjct: 180 IRVNAVRPGVIYTEIHASGGEPGRVD-------RVKAGIPMGRGGTAEEVARAILWLLSD 232

Query: 247 AASYITGQVISIDGG 261
            ASY TG  I + GG
Sbjct: 233 EASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 98.5 bits (246), Expect = 9e-25
 Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 4/187 (2%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
             L+TGG  GIG  +  E A+ GA V     ++    E        G KV    CD+S  
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           ++  +  + +     G + IL+NNA +V  K+  E   EE       N  + +   +   
Sbjct: 61  EEVYEAAKKIKKEV-GDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT---DSIRVNAV 196
           P +    +  IV ++SVAG IS   L+ Y ASK A     ++L  E        I+   V
Sbjct: 120 PDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLV 179

Query: 197 SPWAVNT 203
            P+ +NT
Sbjct: 180 CPYFINT 186

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 98.1 bits (245), Expect = 1e-24
 Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 8/206 (3%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFG 79
           A+VTG T GIG A  EELA+ G +V    R Q  ++   +E E K G +      D S G
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAG 63

Query: 80  DQREKLIETVSSVFDGKLNILVNNA--ALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
           D   + IE      D  + ILVNN   +  + +   E   +E   +++ NV ++  + +L
Sbjct: 64  DDIYERIEKELEGLD--IGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRL 121

Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
             P +      +IV +SS AG I  P L+ Y+ASK  ++  ++ L  E+ +  I V ++ 
Sbjct: 122 ILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSLL 181

Query: 198 PWAVNTQ---ISPPDLNDLLVQEYVK 220
           P+ V T+   I    L     +++V+
Sbjct: 182 PYLVATKMSKIRKSSLFVPSPEQFVR 207

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 98.5 bits (245), Expect = 1e-24
 Identities = 68/256 (26%), Positives = 107/256 (41%), Gaps = 16/256 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G TAL+TG  RGIG A  +   R GA V     +         E       ++  V D
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60

Query: 76  LSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
                 +  +   V+++ D  G ++ILVNNAAL  +    + T E Y  + + NV  +  
Sbjct: 61  ------QASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLF 114

Query: 134 LCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           + Q     + A G    I+ M+S AG      +  Y A+K A+  LT++         I 
Sbjct: 115 MMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGIN 174

Query: 193 VNAVSPWAVNTQISP------PDLNDLLVQEYVKLI-AKTPLARSAEPNEISPLVAFLCL 245
           VNA++P  V+ +             +    E  +L+    P  R     +++ +  FL  
Sbjct: 175 VNAIAPGVVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLAS 234

Query: 246 PAASYITGQVISIDGG 261
             A YI  Q  ++DGG
Sbjct: 235 TDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 98.1 bits (245), Expect = 2e-24
 Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 5/191 (2%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
            T L+TG + GIG A     A+ GA +   GR    + E   E  +K F V      L  
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAK-FPVKVLPLQLDV 59

Query: 79  GDQREKLIETVSSVFDG--KLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLC 135
            D RE +   + ++ +    ++ILVNNA L + +  A E  LE++ +++ TNV+   ++ 
Sbjct: 60  SD-RESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVT 118

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +L  P++ A     I+ + S+AG       + Y A+K A+ Q + NL  +     IRV  
Sbjct: 119 RLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTN 178

Query: 196 VSPWAVNTQIS 206
           + P  V T+ S
Sbjct: 179 IEPGLVETEFS 189

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 98.1 bits (244), Expect = 2e-24
 Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 12/257 (4%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           + + L G  A++TG   G+G  +   LA+ GA +   G       E   + E+ G K   
Sbjct: 2   QLFDLNGKVAIITGCNTGLGQGMAIGLAKAGADI--VGVGVAEAPETQAQVEALGRKFHF 59

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
              DL      + ++     V  G ++IL+NNA ++  +   E+  +++  V++ N ++ 
Sbjct: 60  ITADLIQQKDIDSIVSQAVEVM-GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTV 118

Query: 132 YHLCQLAHPLLKASGNA----SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           + L Q         GN     +I  M S  G I +P   +Y ASK A+  LT+ LA E +
Sbjct: 119 FFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVP---SYTASKSAVMGLTRALATELS 175

Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
             +I VNA++P  + T  +     D        ++ + P +R   P++++    FL   A
Sbjct: 176 QYNINVNAIAPGYMATDNTAALRAD--TARNEAILERIPASRWGTPDDLAGPAIFLSSSA 233

Query: 248 ASYITGQVISIDGGYTA 264
           + Y+TG  +++DGG+ A
Sbjct: 234 SDYVTGYTLAVDGGWLA 250

Length = 251

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 97.6 bits (243), Expect = 2e-24
 Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 6/213 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+G  ALVTG + GIG A    LA  GA+V    R  + +     E E++G K      D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++   Q +  +E       G+L+ILVNNA ++++    +    +++ ++ TN+    +  
Sbjct: 61  VTDEQQVDAAVERTVEAL-GRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTT 119

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
             A P        +IV +SSVAG +++   + Y A+K  +N  ++ L  E     +RV  
Sbjct: 120 HAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVV 179

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA 228
           + P  V+T+     L D +     K   +  ++
Sbjct: 180 IEPGTVDTE-----LRDHITHTITKEAYEERIS 207

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 97.5 bits (243), Expect = 3e-24
 Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 19/260 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESK-GFKVTGSV 73
           ++G T +++GGTRGIG AIV E A+ G ++  T   +    N+  ++ E K G K     
Sbjct: 6   MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYP 65

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAAL----VV------MKRATEYTLEEYSSV 123
            ++   +  ++L + +   FD +++  ++NA +    VV      M+   +     Y++ 
Sbjct: 66  LNILEPETYKELFKKIDEDFD-RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTAT 124

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
           ++  V  +    Q A   ++  G  SI+ +SS    + I   + +  SK A+  + K  A
Sbjct: 125 VNAFVVGA----QEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAA 180

Query: 184 CEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL 243
            E    +IRVNAVS   ++T       N   V+   K    +PL R  +P +++    FL
Sbjct: 181 TELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKA--KTEELSPLNRMGQPEDLAGACLFL 238

Query: 244 CLPAASYITGQVISIDGGYT 263
           C   AS++TGQ I +DGG T
Sbjct: 239 CSEKASWLTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 96.8 bits (241), Expect = 4e-24
 Identities = 80/273 (29%), Positives = 112/273 (41%), Gaps = 54/273 (19%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           T ++TG   GIG A  E L   G +V         I   ++E +           DLS  
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTV---------IGIDLREADVI--------ADLSTP 43

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           + R   I  V +   G L+ LVN A +     A          V+  N      L +   
Sbjct: 44  EGRAAAIADVLARCSGVLDGLVNCAGVGGTTVA--------GLVLKVNYFGLRALMEALL 95

Query: 140 PLLKASGNASIVFMSSVAG---------------------AISI------PRLSAYAASK 172
           P L+     + V +SS+AG                     A+++      P   AYA SK
Sbjct: 96  PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSK 155

Query: 173 GAINQLTKNLACEWATDS-IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSA 231
            A+   T+  A  W   + +RVN V+P  V T I    L D    E V     TP+ R A
Sbjct: 156 EALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFV-TPMGRRA 214

Query: 232 EPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
           EP+EI+P++AFL   AAS+I G  + +DGG  A
Sbjct: 215 EPDEIAPVIAFLASDAASWINGANLFVDGGLDA 247

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 97.8 bits (243), Expect = 4e-24
 Identities = 85/271 (31%), Positives = 124/271 (45%), Gaps = 30/271 (11%)

Query: 7   PVFGDKKW----SLRGMTALVTGGTRGIGYAIVEELARFGASVHTC-----GRDQNMINE 57
           P  G+K +     L+   ALVTGG  GIG A     AR GA V          D   + +
Sbjct: 34  PDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKK 93

Query: 58  RIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRA----- 112
            I+E   K   + G + D  F      L+        G L+I+    ALV  K+      
Sbjct: 94  IIEECGRKAVLLPGDLSDEKFA---RSLVHEAHKALGG-LDIM----ALVAGKQVAIPDI 145

Query: 113 TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK 172
            + T E++    + NV + + L Q A PLL     ASI+  SS+      P L  YAA+K
Sbjct: 146 ADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAATK 203

Query: 173 GAINQLTKNLACEWATDSIRVNAVSPWAVNT--QISPPDLNDLLVQEYVKLIAKTPLARS 230
            AI   ++ LA + A   IRVN V+P  + T  QIS     D + Q       +TP+ R+
Sbjct: 204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ----FGQQTPMKRA 259

Query: 231 AEPNEISPLVAFLCLPAASYITGQVISIDGG 261
            +P E++P+  +L    +SY+T +V  + GG
Sbjct: 260 GQPAELAPVYVYLASQESSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 96.6 bits (241), Expect = 7e-24
 Identities = 77/261 (29%), Positives = 112/261 (42%), Gaps = 23/261 (8%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  AL+TGG  GIG A+VE     GA V    R    +    Q +      V G V  
Sbjct: 4   LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDV-- 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEE-----YSSVMSTNVES 130
            S+ D +  + +TV +   GKL+  V NA +     +      E     +  + + NV+ 
Sbjct: 62  TSYADNQRAVDQTVDAF--GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKG 119

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
                + A P LKASG  S++F  S +          Y ASK A+  L + LA E A   
Sbjct: 120 YLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK- 177

Query: 191 IRVNAVSPWAVNTQISPPD--------LNDLL-VQEYVKLIAKTPLARSAEPNEISPLVA 241
           IRVN V+P    T +  P         ++D   + + +   A TPL  + +P + +    
Sbjct: 178 IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIA--AITPLQFAPQPEDHTGPYV 235

Query: 242 FLCLPAAS-YITGQVISIDGG 261
            L     S  +TG VI+ DGG
Sbjct: 236 LLASRRNSRALTGVVINADGG 256

Length = 263

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 96.1 bits (239), Expect = 8e-24
 Identities = 75/251 (29%), Positives = 128/251 (50%), Gaps = 18/251 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK----GFKVTG 71
           L G  ALVTG + GIG  I   L   GA V   G        R+++ E+     G +V  
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHG-------TRVEKLEALAAELGERVKI 56

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
              +LS  D+ + L +   +  +G ++ILVNNA +         + E++ SV+  N+ ++
Sbjct: 57  FPANLSDRDEVKALGQKAEADLEG-VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTAT 115

Query: 132 YHLC-QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           + L  +L HP+++      I+ ++SV G    P  + Y ASK  +   +K+LA E AT +
Sbjct: 116 FRLTRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRN 174

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           + VN V+P  + + ++   LND   ++   ++   P+ R     E++  VA+L    A+Y
Sbjct: 175 VTVNCVAPGFIESAMT-GKLND---KQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAY 230

Query: 251 ITGQVISIDGG 261
           +TGQ I ++GG
Sbjct: 231 VTGQTIHVNGG 241

Length = 245

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 95.7 bits (239), Expect = 9e-24
 Identities = 61/248 (24%), Positives = 100/248 (40%), Gaps = 20/248 (8%)

Query: 25  GGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS---VCDLSFGDQ 81
                I +AI +  A  GA V        +    + E      K   +     D++  + 
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDEL----AKELPADVIPLDVTSDED 58

Query: 82  REKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
            ++L E V     GK++ LV++ A+       K   + + E +   +  +  S   L + 
Sbjct: 59  IDELFEKVKEDG-GKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKA 117

Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
           A PL+      SIV +S +A     P       +K A+  L + LA E     IRVN +S
Sbjct: 118 AKPLMNE--GGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNTIS 175

Query: 198 PWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
                T         + ++  EY       PL R+A   E++   AFL    A  ITGQ+
Sbjct: 176 AGPTKTTAGSGIGGFDKMV--EY--AEEMAPLGRNASAEEVANAAAFLLSDLARGITGQI 231

Query: 256 ISIDGGYT 263
           + +DGG++
Sbjct: 232 LYVDGGFS 239

Length = 239

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 95.4 bits (237), Expect = 1e-23
 Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 16/246 (6%)

Query: 22  LVTGGTRGIGYAIVEELAR--FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           LVTG +RGIG AI   LA   F   VH     ++     +   +++G      +      
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVH-YHSGRSDAESVVSAIQAQG--GNARLLQFDVA 58

Query: 80  DQ---REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           D+   R  L   ++    G    +V NA +         + E++  V+ TN++  Y++  
Sbjct: 59  DRVACRTLLEADIAE--HGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIH 116

Query: 137 -LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
               P+++A     I+ ++SV+G +       Y+A+K  +   TK LA E A   I VN 
Sbjct: 117 PCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNC 176

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           ++P  ++T++     +DL      + +   P+ R  +P E++ L  FL    ASY+T QV
Sbjct: 177 IAPGLIDTEMLAEVEHDL-----DEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQV 231

Query: 256 ISIDGG 261
           IS++GG
Sbjct: 232 ISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 30/262 (11%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G   +VTG  +GIG  +    A  GA V    R + +++E   E  + G +      DL 
Sbjct: 8   GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLE 66

Query: 78  FGDQREKLIETVSSVFDGKLNILVNN-AALVVMKRATEYTLEEYS-----SVMSTNVESS 131
                +  +      F G++++L+NN    +  K   EY  E+       S+  T     
Sbjct: 67  TYAGAQAAMAAAVEAF-GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPT----- 120

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
              C+   P + A G  +IV +SS+A    I R+  Y+A+KG +N LT +LA E+A   I
Sbjct: 121 LWCCRAVLPHMLAQGGGAIVNVSSIATR-GINRVP-YSAAKGGVNALTASLAFEYAEHGI 178

Query: 192 RVNAVSPWAVNTQISPP-----------DLNDLLVQEYV-KLIAKTPLARSAEPNEISPL 239
           RVNAV+P       +PP           +      Q+ V + +  + + R    +E    
Sbjct: 179 RVNAVAPGGTE---APPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAA 235

Query: 240 VAFLCLPAASYITGQVISIDGG 261
           + FL    ASYITG V+ + GG
Sbjct: 236 ILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 94.9 bits (236), Expect = 3e-23
 Identities = 80/253 (31%), Positives = 116/253 (45%), Gaps = 20/253 (7%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
             L+TG +RGIG A     A  G SV     RD     E      + G +      D++ 
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN 63

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRA-TEYTLEEYSSVMSTNVESSYHLC-- 135
                 + + V S F G+L+ LVNNA +V       +        +  TNV  +Y LC  
Sbjct: 64  EADVIAMFDAVQSAF-GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAY-LCAR 121

Query: 136 QLAHPLLKASGNA--SIVFMSSVAGAISIP-RLSAYAASKGAINQLTKNLACEWATDSIR 192
           + A  L    G    +IV +SS+A  +  P     YA SKGA++ LT  LA E     +R
Sbjct: 122 EAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVR 181

Query: 193 VNAVSPWAVNTQI----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           VNAV P  + T+I      P           +L A+TPL R+ E +E++  + +L   AA
Sbjct: 182 VNAVRPGLIETEIHASGGQPG-------RAARLGAQTPLGRAGEADEVAETIVWLLSDAA 234

Query: 249 SYITGQVISIDGG 261
           SY+TG ++ + GG
Sbjct: 235 SYVTGALLDVGGG 247

Length = 248

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 94.9 bits (236), Expect = 4e-23
 Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 8/252 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE--SKGFKVTGS 72
           S +  T LVTGG  GIG  +   L   GA+V   GR+ + +    +E E       V   
Sbjct: 4   SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYE 63

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVESS 131
             D++  DQ  + ++  ++   G+L+ +V+ A     +   T+   + +   +  NV  +
Sbjct: 64  PADVTDEDQVARAVDAATAW-HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGT 122

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
            ++ + A   L   G  S V +SS+A + +     AY  +K A++ L K  A E     +
Sbjct: 123 MYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWV 182

Query: 192 RVNAVSPWAVNTQISPPDLND-LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           RVN++ P  + T +  P      L  +Y    A TPL R  E  +++ L  FL   AAS+
Sbjct: 183 RVNSIRPGLIRTDLVAPITESPELSADYR---ACTPLPRVGEVEDVANLAMFLLSDAASW 239

Query: 251 ITGQVISIDGGY 262
           ITGQVI++DGG+
Sbjct: 240 ITGQVINVDGGH 251

Length = 276

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 93.9 bits (234), Expect = 6e-23
 Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 18/252 (7%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVTG 71
           L G   LVT   GT GIG A        GA V      +  + E   E   E    +V  
Sbjct: 15  LAGKVVLVTAAAGT-GIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEA 73

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
            VCD++   Q + LI+       G+L++LVNNA L       + T +E+S V+   +  +
Sbjct: 74  VVCDVTSEAQVDALIDAAVERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGT 132

Query: 132 YHLCQLAHPLLKASGNAS-IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           +   + A   ++A G+   IV  +SV G  +    + YAA+K  +  LT+  A E A   
Sbjct: 133 FRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYG 192

Query: 191 IRVNAVSP-WAVN---TQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
           +R+NAV+P  A++    +++  +L D       +L A+    R+AEP E++ ++AFL   
Sbjct: 193 VRINAVAPSIAMHPFLAKVTSAELLD-------ELAAREAFGRAAEPWEVANVIAFLASD 245

Query: 247 AASYITGQVISI 258
            +SY+TG+V+S+
Sbjct: 246 YSSYLTGEVVSV 257

Length = 262

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 93.8 bits (233), Expect = 6e-23
 Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 9/253 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+  TA+VTGG  GIG A     A  GA V     ++    +   +  +KG       CD
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  D  +  +        G +++LVNNA        T+     +  +++ N+  + H+ 
Sbjct: 61  ITDRDSVDTAVAAAEQAL-GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMH 119

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
               P +   G   IV ++S A  +     + YAA KG +   +K +A E A   I VN 
Sbjct: 120 HAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNV 179

Query: 196 VSPWAVNTQI-----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           V P   +T +        +  + L + + + I   PL R  +P+++   + F     AS+
Sbjct: 180 VCPGPTDTALLDDICGGAENPEKLREAFTRAI---PLGRLGQPDDLPGAILFFSSDDASF 236

Query: 251 ITGQVISIDGGYT 263
           ITGQV+S+ GG T
Sbjct: 237 ITGQVLSVSGGLT 249

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 93.6 bits (233), Expect = 7e-23
 Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 14/251 (5%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
               ++TGG+ G+G A+ +  A  GA+V   GR +  + E   E E    +V     D+ 
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ- 136
             +  +K++E +   F G+++ L+NNAA   +  A + ++  ++SV+   +  +++  Q 
Sbjct: 61  NPEDVQKMVEQIDEKF-GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQA 119

Query: 137 LAHPLLKASGNASIVFMSSV----AGAISIPRLSAYAASKGAINQLTKNLACEWATD-SI 191
           +    ++     +I+ M +     AG   I      AA+K  +  +T+ LA EW     I
Sbjct: 120 VGKYWIEKGIKGNIINMVATYAWDAGPGVIHS----AAAKAGVLAMTRTLAVEWGRKYGI 175

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-PLARSAEPNEISPLVAFLCLPAASY 250
           RVNA++P  +        L     +E  K   ++ PL R   P EI+ L  FL    A+Y
Sbjct: 176 RVNAIAPGPIERTGGADKL--WESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAY 233

Query: 251 ITGQVISIDGG 261
           I G  I++DGG
Sbjct: 234 INGTCITMDGG 244

Length = 252

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 92.6 bits (230), Expect = 2e-22
 Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 9/185 (4%)

Query: 83  EKLIETVSSVFDGKLNILVNNAALVVMKRATE-YTLEEYSSVMSTNVESSYHLCQLAHPL 141
           E+L++ V     G +++LV+N  +       +  +  +            + L Q A   
Sbjct: 60  EELVDAVLQAG-GAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQ 118

Query: 142 LKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAV 201
           +K +G  SI+F++S      +   S Y  ++ A   L ++LA E + D+I V A+ P   
Sbjct: 119 MKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGPNFF 178

Query: 202 NTQ----ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
           N+      S  + N  L +   ++    PL R   P+E+  LVAFL    A  ITGQ  +
Sbjct: 179 NSPTYFPTSDWENNPELRE---RVKRDVPLGRLGRPDEMGALVAFLASRRADPITGQFFA 235

Query: 258 IDGGY 262
             GGY
Sbjct: 236 FAGGY 240

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 92.5 bits (230), Expect = 2e-22
 Identities = 73/255 (28%), Positives = 110/255 (43%), Gaps = 21/255 (8%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           TALVTG   GIG A+       G  V     D   +           F      CDL+  
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARF--VPVACDLTDA 61

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
                 +   ++   G +++LV NA         + T   + +  + N+E++Y   +   
Sbjct: 62  ASLAAALANAAAER-GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVL 120

Query: 140 PLLKASGNASIVFMSSVAG--AISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
             +      ++V + SV G  A+  P   AY+A+K  +   TK LA E+    IR NAV+
Sbjct: 121 EGMLKRSRGAVVNIGSVNGMAALGHP---AYSAAKAGLIHYTKLLAVEYGRFGIRANAVA 177

Query: 198 PWAVNTQI------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           P  V TQ       + P + + L + Y       PL   A P++++  V FL  PAA  I
Sbjct: 178 PGTVKTQAWEARVAANPQVFEELKKWY-------PLQDFATPDDVANAVLFLASPAARAI 230

Query: 252 TGQVISIDGGYTAGN 266
           TG  + +DGG TAGN
Sbjct: 231 TGVCLPVDGGLTAGN 245

Length = 257

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 91.6 bits (227), Expect = 4e-22
 Identities = 72/249 (28%), Positives = 126/249 (50%), Gaps = 12/249 (4%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           A VTGG  GIG +I + L + G  V   CG +     + +++ ++ GF    S  ++   
Sbjct: 6   AYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW 65

Query: 80  DQREKLIETVSSVFDGKLNILVNNAAL---VVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           D  +   + V +   G++++LVNNA +   VV ++ T    E++++V+ TN+ S +++ +
Sbjct: 66  DSTKAAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTR---EDWTAVIDTNLTSLFNVTK 121

Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
                +   G   I+ +SSV G       + Y+ +K  I+  T +LA E AT  + VN V
Sbjct: 122 QVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTV 181

Query: 197 SPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI 256
           SP  + T +      D+L     K++A  P+ R   P+EI  +VA+L    + + TG   
Sbjct: 182 SPGYIGTDMVKAIRPDVLE----KIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF 237

Query: 257 SIDGGYTAG 265
           S++GG   G
Sbjct: 238 SLNGGLHMG 246

Length = 246

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 90.9 bits (226), Expect = 6e-22
 Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 3/183 (1%)

Query: 23  VTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQR 82
           +TG + GIG A     A  GA V    R    ++E  +E    G +    V D++   Q 
Sbjct: 5   ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQV 64

Query: 83  EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLL 142
           E+  +T    F G+++  VNNA + V  R  + T EE+  V   N     +    A P L
Sbjct: 65  ERAADTAVERF-GRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHL 123

Query: 143 KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD--SIRVNAVSPWA 200
           +  G  +++ + S+ G  S P  +AY+ASK A+   T++L  E A D   I V  V P A
Sbjct: 124 RRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQPTA 183

Query: 201 VNT 203
           +NT
Sbjct: 184 MNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 90.8 bits (226), Expect = 8e-22
 Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 1/186 (0%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            AL+TG + GIG A     A+ G  +    R Q+ +     E  S G K      DLS  
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP 67

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           +     I  +   F G  ++L+NNA +       E  L ++  V+  N+ S +  C    
Sbjct: 68  EAIAPGIAELLEQF-GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVL 126

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P ++A G   I+ +SS+A   + P+  AY  SK A+   TK LA E  +  IRV  ++  
Sbjct: 127 PGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLG 186

Query: 200 AVNTQI 205
           AVNT +
Sbjct: 187 AVNTPL 192

Length = 241

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 90.9 bits (226), Expect = 9e-22
 Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 24/259 (9%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTC---GRDQNMINERIQEWESKGFKVTGSVCDL 76
            A+V GG + +G  +   LA  G  V            + + I     +G    G   D 
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEG-MAYGFGADA 62

Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC- 135
           +       L   V  +F G++++LV NA +      T++ L ++   +  N+   Y LC 
Sbjct: 63  TSEQSVLALSRGVDEIF-GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNL-VGYFLCA 120

Query: 136 -QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK-GAINQLTKNLACEWATDSIRV 193
            + +  +++      I+ ++S +G +     S Y+A+K G +  LT++LA + A   I V
Sbjct: 121 REFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVG-LTQSLALDLAEYGITV 179

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKL-----------IAKTPLARSAEPNEISPLVAF 242
           +++        +  P    LL Q   KL           I K PL R  +  ++  ++ F
Sbjct: 180 HSLML---GNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLF 236

Query: 243 LCLPAASYITGQVISIDGG 261
              P ASY TGQ I++ GG
Sbjct: 237 YASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 90.9 bits (226), Expect = 1e-21
 Identities = 79/267 (29%), Positives = 108/267 (40%), Gaps = 36/267 (13%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVC 74
           L+G  AL+TGG  G+G A+VE     GA V    R      E++ E  +  G  V G   
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSA----EKVAELRADFGDAVVGVEG 57

Query: 75  DL-SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEE-----YSSVMSTNV 128
           D+ S  D    +   V     GKL+  + NA +     +     EE     +  +   NV
Sbjct: 58  DVRSLADNERAVARCVERF--GKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINV 115

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           +      + A P L A+   S++F  S AG         Y ASK A+  L K LA E A 
Sbjct: 116 KGYILGAKAALPALYAT-EGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAP 174

Query: 189 DSIRVNAVSPWAVNT-------------QISPPDLNDLLVQEYVKLIAKTPLARSAEPNE 235
             IRVN V+P  + T              IS P L+D+L           PL  + EP +
Sbjct: 175 -HIRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKS-------ILPLGFAPEPED 226

Query: 236 IS-PLVAFLCLPAASYITGQVISIDGG 261
            +   V           TG VI+ DGG
Sbjct: 227 YTGAYVFLASRGDNRPATGTVINYDGG 253

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 90.4 bits (225), Expect = 1e-21
 Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 3/198 (1%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+    L+TG + GIG A+ E LA  GA +   GR+   + E +        +    V D
Sbjct: 3   LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKL-EALAARLPYPGRHRWVVAD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           L+    RE ++     +  G +N+L+NNA +       +   E    +++ N+ +   L 
Sbjct: 62  LTSEAGREAVLARAREM--GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLT 119

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   PLL+A  +A +V + S  G+I  P  ++Y ASK A+   ++ L  E A   +RV  
Sbjct: 120 RALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLY 179

Query: 196 VSPWAVNTQISPPDLNDL 213
           ++P A  T ++   +  L
Sbjct: 180 LAPRATRTAMNSEAVQAL 197

Length = 263

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 89.7 bits (223), Expect = 2e-21
 Identities = 46/185 (24%), Positives = 94/185 (50%), Gaps = 1/185 (0%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
            L+TG + GIG A+  E A+ G +V    R  + ++E   E  +    V   + D++  +
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           + + +I  + +   G L++++ NA +       + + + +   + TN+  +  + + A P
Sbjct: 61  RNQLVIAELEAEL-GGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119

Query: 141 LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA 200
             +A G   +V +SSVA    +P  +AY+ASK A++ L ++L  +     IRV  ++P  
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179

Query: 201 VNTQI 205
           ++T +
Sbjct: 180 IDTPL 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 89.9 bits (223), Expect = 2e-21
 Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 29/259 (11%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV-CDL 76
               +VTGG+RGIG  IV      GA V  C R +        E    G      V CD+
Sbjct: 9   DKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDV 68

Query: 77  SFGDQREKLI-ETVSSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHL 134
           +  +  + LI  TV     G+++ LVNNA      +   E + +E+  +++ N+ S +  
Sbjct: 69  TKEEDIKTLISVTVERF--GRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLA 126

Query: 135 CQLAHPLL-KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A P L K+ GN  I+ +SS+ G+I   + + Y A+KGAI  +TK LA + +   +RV
Sbjct: 127 SKYALPHLRKSQGN--IINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRV 184

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-----------PLARSAEPNEISPLVAF 242
           N +SP  + T          L +E       T            L R     E      F
Sbjct: 185 NCISPGNIWTP---------LWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALF 235

Query: 243 LCLPAASYITGQVISIDGG 261
           L    A++ TG  + + GG
Sbjct: 236 LA-AEATFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 89.5 bits (223), Expect = 2e-21
 Identities = 72/248 (29%), Positives = 107/248 (43%), Gaps = 23/248 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV-C 74
           L+    LVTG   GIG       AR GA+V   GR +  +     E E+ G      +  
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPL 69

Query: 75  DLSFGDQRE--KLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESS 131
           DL     +   +L +T+   F G+L+ +++NA L+  +    +   E +  VM  NV ++
Sbjct: 70  DLLTATPQNYQQLADTIEEQF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNAT 128

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           + L Q   PLL  S  AS+VF SS  G        AYA SK A   + + LA E+   ++
Sbjct: 129 FMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNL 188

Query: 192 RVNAVSPWAVNTQISP---PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           RVN ++P    T +     P  +        KL  KTP        +I PL  +L    +
Sbjct: 189 RVNCINPGGTRTAMRASAFPGEDPQ------KL--KTPE-------DIMPLYLYLMGDDS 233

Query: 249 SYITGQVI 256
               GQ  
Sbjct: 234 RRKNGQSF 241

Length = 247

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 88.4 bits (219), Expect = 4e-21
 Identities = 61/247 (24%), Positives = 99/247 (40%), Gaps = 25/247 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L     LVTG + GIG       AR+GA+V   GR++  + +       +G         
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEG-GRQPQWFI 60

Query: 76  LSFGDQREKLIETVSSVFD---GKLNILVNNAALV--VMKRATEYTLEEYSSVMSTNVES 130
           L       +  + ++        +L+ +++NA L+  V   + E   + +  V   NV +
Sbjct: 61  LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLS-EQNPQVWQDVXQVNVNA 119

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           ++ L Q   PLL  S   S+VF SS  G        AYA SK A   L + LA E+   +
Sbjct: 120 TFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRN 179

Query: 191 IRVNAVSPWAVNTQISP---PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
           +RVN ++P    T +     P  +   ++                P +I PL  +L    
Sbjct: 180 LRVNCINPGGTRTAMRASAFPTEDPQKLK---------------TPADIMPLYLWLMGDD 224

Query: 248 ASYITGQ 254
           +   TG 
Sbjct: 225 SRRKTGM 231

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 88.1 bits (219), Expect = 8e-21
 Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 40/263 (15%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV---------HTCGRDQNMINERIQEWESK 65
              G   LVTG   G+G A     A  GA V            G+  +  ++ + E ++ 
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 66  GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAAL---VVMKRATEYTLEEYSS 122
           G K   +   +  G+   K+++T    F G+++ILVNNA +       + +E   E++  
Sbjct: 62  GGKAVANYDSVEDGE---KIVKTAIDAF-GRVDILVNNAGILRDRSFAKMSE---EDWDL 114

Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
           VM  +++ S+ + + A P ++      I+  SS AG       + Y+A+K  +  L+  L
Sbjct: 115 VMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTL 174

Query: 183 ACEWATDSIRVNAVSPWA---VNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL 239
           A E A  +I  N ++P A   +   + P DL D L  EYV                 +PL
Sbjct: 175 AIEGAKYNITCNTIAPAAGSRMTETVMPEDLFDALKPEYV-----------------APL 217

Query: 240 VAFLCLPAASYITGQVISIDGGY 262
           V +LC   +  +TG +  +  G+
Sbjct: 218 VLYLC-HESCEVTGGLFEVGAGW 239

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 88.1 bits (219), Expect = 1e-20
 Identities = 76/256 (29%), Positives = 113/256 (44%), Gaps = 35/256 (13%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASV--HTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
             ALVTG  R IG AI  +LA  G  V  H   R ++       E  + G +      DL
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVH-YNRSRDEAEALAAEIRALGRRAVALQADL 68

Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           +   +   L+   S+   G + +LVNNA+L     A  +T   +   M+TN+ + + L Q
Sbjct: 69  ADEAEVRALVARASAAL-GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQ 127

Query: 137 LAHPLLKASGNASIVFMSSVAGAISI--------PRLSAYAASKGAINQLTKNLACEWAT 188
                L A     +V M        I        P   +Y  SK A+   T+ LA   A 
Sbjct: 128 AFARALPADARGLVVNM--------IDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAP 179

Query: 189 DSIRVNAVSPWA--VNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL-CL 245
             IRVNA+ P     + + SP        +++ +  A TPL R + P EI+  V +L   
Sbjct: 180 R-IRVNAIGPGPTLPSGRQSP--------EDFARQHAATPLGRGSTPEEIAAAVRYLLDA 230

Query: 246 PAASYITGQVISIDGG 261
           P+   +TGQ+I++DGG
Sbjct: 231 PS---VTGQMIAVDGG 243

Length = 258

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 87.3 bits (217), Expect = 1e-20
 Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 16/247 (6%)

Query: 20  TALVTGGTRGIGYAIVEELARFGAS--VHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
             ++TG +RGIG A+ EEL + G+   V    R +  + E ++E    G +VT    DLS
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQE-LKEELRPGLRVTTVKADLS 59

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQ 136
                E+L+E +  + DG+ ++L+NNA  +  + +     L+E       N+ S   L  
Sbjct: 60  DAAGVEQLLEAIRKL-DGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTS 118

Query: 137 LAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
                 K  G   ++V +SS A          Y +SK A +   + LA E     +RV +
Sbjct: 119 TLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAE--EPDVRVLS 176

Query: 196 VSPWAVNTQISPPDLN----DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
            +P  V+T +                +  L  K  L    +P + +  +A L L    + 
Sbjct: 177 YAPGVVDTDMQREIRETSADPETRSRFRSLKEKGEL---LDPEQSAEKLANL-LEKDKFE 232

Query: 252 TGQVISI 258
           +G  +  
Sbjct: 233 SGAHVDY 239

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 88.8 bits (221), Expect = 1e-20
 Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 3/186 (1%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
             ++TG + G+G A     AR GA V    R +  +     E  + G +    V D++  
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADA 69

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           +  +   +       G ++  VNNA + V     + T EE+  V         H    A 
Sbjct: 70  EAVQAAADRAEEEL-GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAAL 128

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD--SIRVNAVS 197
             ++     +I+ + S     SIP  SAY A+K AI   T +L CE   D   + V  V 
Sbjct: 129 RHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQ 188

Query: 198 PWAVNT 203
           P AVNT
Sbjct: 189 PPAVNT 194

Length = 334

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 87.1 bits (216), Expect = 2e-20
 Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 39/264 (14%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           T LVTGG+RG+G AI    AR GA V    H   + ++       E   +   +   V D
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVVNYH---QSEDAAEALADELGDRAIALQADVTD 63

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAAL------VVMKRATEYTLEEYSSVMSTNVE 129
               +Q + +  T +  F   +  +VNNA           K+A + T E++   +  +V+
Sbjct: 64  ---REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVK 120

Query: 130 SSYHLCQLAHPLLKASGNASIV------FMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
            + +  Q A P ++  G   I+      F + V     +P    Y  +K A+  LT+NLA
Sbjct: 121 GALNTIQAALPGMREQGFGRIINIGTNLFQNPV-----VP-YHDYTTAKAALLGLTRNLA 174

Query: 184 CEWATDSIRVNAVSPWAVNT----QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL 239
            E     I VN VS   + T      +P ++ DL+          TPL +   P E +  
Sbjct: 175 AELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAA-------TTPLRKVTTPQEFADA 227

Query: 240 VAFLCLPAASYITGQVISIDGGYT 263
           V F   P A  +TGQ + +DGG  
Sbjct: 228 VLFFASPWARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 89.2 bits (222), Expect = 4e-20
 Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 5/184 (2%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           D +  L G   L+TG + GIG A   ++A  GA+V    R+   ++E + E  +KG    
Sbjct: 364 DLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAH 423

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYT---LEEYSSVMSTN 127
              CDL+     +  ++ + +     ++ LVNNA   + +R+ E +     +Y   M+ N
Sbjct: 424 AYTCDLTDSAAVDHTVKDILAEHGH-VDYLVNNAGRSI-RRSVENSTDRFHDYERTMAVN 481

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
              +  L     P ++      +V +SS+    + PR SAY ASK A++  +   A E  
Sbjct: 482 YFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETL 541

Query: 188 TDSI 191
           +D I
Sbjct: 542 SDGI 545

Length = 657

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 88.4 bits (219), Expect = 7e-20
 Identities = 73/269 (27%), Positives = 113/269 (42%), Gaps = 20/269 (7%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKV 69
           K+ +L    A VTGG  GIG      LA  GA V     +         E   +    + 
Sbjct: 408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRA 467

Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
                D++     +     V+  + G ++I+VNNA +       E TL+E+   +     
Sbjct: 468 VALKMDVTDEQAVKAAFADVALAYGG-VDIVVNNAGIATSSPFEETTLQEWQLNLDILAT 526

Query: 130 SSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
             + + + A   ++  G   +IVF++S     +    SAY+A+K A   L + LA E  T
Sbjct: 527 GYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGT 586

Query: 189 DSIRVNAVSPWAV--NTQISPPDLN-----------DLLVQEYVKLIAKTPLARSAEPNE 235
             IRVN V+P AV   + I   +             D L + Y K   +T L R   P +
Sbjct: 587 YGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAK---RTLLKRHIFPAD 643

Query: 236 ISPLVAFLCLPAASYITGQVISIDGGYTA 264
           I+  V FL    +   TG +I++DGG  A
Sbjct: 644 IAEAVFFLASSKSEKTTGCIITVDGGVPA 672

Length = 676

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 84.6 bits (210), Expect = 2e-19
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
            +TG   GIG A     A  G  V     ++  +     E  + G   TG++ D++    
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGA-GNAWTGAL-DVTDRAA 62

Query: 82  REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPL 141
            +  +   ++   G+L++L NNA ++      +  LE +  V+  NV+   +    A P 
Sbjct: 63  WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPY 122

Query: 142 LKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAV 201
           LKA+  A ++  SS +     P L+ Y+A+K A+  LT+ L  EW    IRV  V P  V
Sbjct: 123 LKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFV 182

Query: 202 NTQI 205
           +T +
Sbjct: 183 DTAM 186

Length = 260

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 84.0 bits (208), Expect = 2e-19
 Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 11/193 (5%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
              G T L+TGG  GIG A+ +     G +V  CGR++  + E   E       +   VC
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE----IHTEVC 57

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKR----ATEYTLEEYSSVMSTNVES 130
           D++  D R +L+E +   +   LN+L+NNA   + +       E  L++    ++TN+ +
Sbjct: 58  DVADRDSRRELVEWLKKEYP-NLNVLINNAG--IQRNEDLTGAEDLLDDAEQEIATNLLA 114

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
              L  L  P L     A+I+ +SS    + +     Y A+K AI+  T  L  +    S
Sbjct: 115 PIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTS 174

Query: 191 IRVNAVSPWAVNT 203
           + V  ++P  V+T
Sbjct: 175 VEVIELAPPLVDT 187

Length = 245

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 83.8 bits (208), Expect = 3e-19
 Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 19/255 (7%)

Query: 18  GMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGSVC 74
           G   L+TG    R I + I + L   GA +    + +  + +R+++  E  G       C
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPE-ALRKRVEKLAERLGESALVLPC 59

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVN---NAALVVMKRAT-EYTLEEYSSVMSTNVES 130
           D+S  ++ ++L   V   + GKL+ LV+    A  V +K    + + + +   +     S
Sbjct: 60  DVSNDEEIKELFAEVKKDW-GKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDI---S 115

Query: 131 SYHLCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           +Y L  LA   L       SIV +S +     +P  +    +K A+    + LA E    
Sbjct: 116 AYSLVSLAKAALPIMNPGGSIVTLSYLGSERVVPGYNVMGVAKAALESSVRYLAYELGRK 175

Query: 190 SIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
            IRVNA+S   + T  +      + +L  EY +  A  PL R+    E+    AFL    
Sbjct: 176 GIRVNAISAGPIKTLAASGITGFDKML--EYSEQRA--PLGRNVTAEEVGNTAAFLLSDL 231

Query: 248 ASYITGQVISIDGGY 262
           +S ITG++I +DGGY
Sbjct: 232 SSGITGEIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 82.8 bits (205), Expect = 5e-19
 Identities = 58/190 (30%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           ++  T LVTG  RGIG A VE L   GA  V+   RD       + ++  K   V     
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDK---VVPLRL 57

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRA-TEYTLEEYSSVMSTNVESSYH 133
           D++  +  +        V     ++++NNA ++       E  LE     M  NV     
Sbjct: 58  DVTDPESIKAAAAQAKDV-----DVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLR 112

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L Q   P+LKA+G  +IV ++SVA   + P +  Y+ASK A   LT+ L  E A     V
Sbjct: 113 LAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLV 172

Query: 194 NAVSPWAVNT 203
            +V P  ++T
Sbjct: 173 LSVHPGPIDT 182

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 82.7 bits (205), Expect = 6e-19
 Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 12/185 (6%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
            TAL+TG +RGIG AI  ELA    ++   GR    ++E   E        T    DL+ 
Sbjct: 4   PTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAELPG----ATPFPVDLT- 57

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
               E +   V  +  G+L++LV+NA +  +    E T++E+ + +  NV +   L +L 
Sbjct: 58  --DPEAIAAAVEQL--GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
            P L+A+    +VF++S AG  + P   +YAASK A+  L   L  E    ++RV +V P
Sbjct: 114 LPALRAAH-GHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPG-NVRVTSVHP 171

Query: 199 WAVNT 203
              +T
Sbjct: 172 GRTDT 176

Length = 227

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 24/225 (10%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            LRG    +TGG RGIG A    LA  GA V     D+ +  E   E       V G   
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPL 57

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++        ++ V +   G +++LVNNA ++ +    +        ++  NV      
Sbjct: 58  DVTDPASFAAFLDAVEADL-GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILG 116

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +LA P +   G   +V ++S+AG I +P ++ Y ASK A+   T     E     + V+
Sbjct: 117 SKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVS 176

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA---RSAEPNEI 236
            V P  VNT+                LIA T  A   ++ EP ++
Sbjct: 177 VVLPSFVNTE----------------LIAGTGGAKGFKNVEPEDV 205

Length = 273

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 81.3 bits (201), Expect = 2e-18
 Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 26/252 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+G    + G + G+GYA+     + GA V    R++N + +R+++  SK   +   V D
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL-KRMKKTLSKYGNIHYVVGD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRA-TEYTLEEYS---SVMSTNVESS 131
           +S  +    +IE  + V +           LVV      E T+EE+S    +++ +++  
Sbjct: 62  VSSTESARNVIEKAAKVLNAI-------DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIP 114

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAASKGAINQLTKNLACEWATDS 190
            +    +   LK    +SIV +SS++G   + P   +YA +K  + +  + LA E     
Sbjct: 115 LYAVNASLRFLKEG--SSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRG 172

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLVAFLCLPAAS 249
           IRVN ++P  ++    P        + + KL     L    A P + + ++ +L    A 
Sbjct: 173 IRVNGIAPTTISGDFEPE-------RNWKKL---RKLGDDMAPPEDFAKVIIWLLTDEAD 222

Query: 250 YITGQVISIDGG 261
           ++ G VI +DGG
Sbjct: 223 WVDGVVIPVDGG 234

Length = 238

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 81.4 bits (201), Expect = 5e-18
 Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 24/261 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVT 70
            L G  A+VTG   G+G A    LAR GA+V         D + + + I+   +K   V 
Sbjct: 9   DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVA 68

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
           G +   +  D+   L+ T   +  G L+I+VNNA +   +     + EE+ +V++ ++  
Sbjct: 69  GDISQRATADE---LVATAVGL--GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRG 123

Query: 131 SYHLCQLAHPLLKASGNAS-------IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
            + L + A    +A   A+       IV  SS AG +     + Y A+K  I  LT + A
Sbjct: 124 HFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAA 183

Query: 184 CEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL 243
                  +R NA+ P A  T ++     D      V+     PL+    P  + PLV FL
Sbjct: 184 RALGRYGVRANAICPRA-RTAMTADVFGDA---PDVEAGGIDPLS----PEHVVPLVQFL 235

Query: 244 CLPAASYITGQVISIDGGYTA 264
             PAA+ + GQV  + G    
Sbjct: 236 ASPAAAEVNGQVFIVYGPMVT 256

Length = 306

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 79.8 bits (197), Expect = 6e-18
 Identities = 37/114 (32%), Positives = 57/114 (50%)

Query: 95  GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMS 154
           G+L+ L NNA +       +  L  +  ++  NV+   +    A P LKA+  A ++  +
Sbjct: 75  GRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALPYLKATPGARVINTA 134

Query: 155 SVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPP 208
           S +     P L+ Y+A+K A+  LT+ L  EWA   IRV  V PW V+T I   
Sbjct: 135 SSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVDTPILTK 188

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 80.4 bits (198), Expect = 8e-18
 Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 31/267 (11%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASV-----HTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           A+VTG  + IG +I   L + G  V      +      +  E      +        + +
Sbjct: 4   AVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSN 63

Query: 76  LS-FGDQREKLIETVSSVFDGKLNILVNNAAL-----VVMKRATEYTLE------EYSSV 123
            +    + E +I+     F G+ ++LVNNA+      ++   A E   +      + + +
Sbjct: 64  SATLFSRCEAIIDACFRAF-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122

Query: 124 MSTNVESSYHLCQLAHPLLKASG------NASIVFMSSVAGAISIPRLSAYAASKGAINQ 177
             +N  + Y L +        +       N SIV +        +   + Y  +K A+  
Sbjct: 123 FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEG 182

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARS-AEPNEI 236
           LT++ A E A   IRVN V+P      + P  +   + ++Y +   K PL +  A   +I
Sbjct: 183 LTRSAALELAPLQIRVNGVAP---GLSLLPDAMPFEVQEDYRR---KVPLGQREASAEQI 236

Query: 237 SPLVAFLCLPAASYITGQVISIDGGYT 263
           + +V FL  P A YITG  I +DGG +
Sbjct: 237 ADVVIFLVSPKAKYITGTCIKVDGGLS 263

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 79.6 bits (196), Expect = 1e-17
 Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G  A++TGG  GIG A   E AR GA V     D+  + + +    ++GF V G +CD+ 
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
             ++   L +    +  G ++++ +NA +VV     E T +++  V+  ++  S H  + 
Sbjct: 66  HREEVTHLADEAFRLL-GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEA 124

Query: 138 AHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
             P LL+      +VF +S AG +    L AY  +K  +  L + LA E   D I V+ +
Sbjct: 125 FLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVL 184

Query: 197 SPWAVNTQI 205
            P  V T +
Sbjct: 185 CPMVVETNL 193

Length = 275

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 79.1 bits (195), Expect = 2e-17
 Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 18/261 (6%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTG 71
           K  L G  A  T  ++GIG+ +   LAR GA V    R ++N+   R +        V+ 
Sbjct: 3   KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSY 62

Query: 72  SVCDLSFGDQREKLIETVSSVFD-GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
            V DL+   +RE L  TV  + + G+ +I   +          E ++E++   +   +  
Sbjct: 63  IVADLT---KREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYP 119

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           + +L +   P ++  G   I++ +SVA    IP ++     + ++  L + LA E     
Sbjct: 120 AVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKG 179

Query: 191 IRVNAVSPWAVNT----QISPPDLN------DLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           I VN + P  + T    Q++           +  +QEY K I   PL R  EP EI  LV
Sbjct: 180 ITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPI---PLGRLGEPEEIGYLV 236

Query: 241 AFLCLPAASYITGQVISIDGG 261
           AFL     SYI G +I +DGG
Sbjct: 237 AFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 78.4 bits (193), Expect = 3e-17
 Identities = 77/256 (30%), Positives = 113/256 (44%), Gaps = 27/256 (10%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G  ALVTG  RGIG  I   L   G  V     D+            +G KV  ++ + +
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDR-----------ERGSKVAKALGENA 58

Query: 78  FG-----DQREKLIETVSSVFD--GKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNV 128
           +          ++   V+ V    G+L+ LV NAA+      T    +L  ++ V++ N+
Sbjct: 59  WFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNL 118

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
                L +   P L+A   A IV ++S     S P   AYAASKG +  LT  LA     
Sbjct: 119 TGPMLLAKHCAPYLRAHNGA-IVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP 177

Query: 189 DSIRVNAVSP-WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
           + IRVNAVSP W      S      L   ++    A+ P  R     +++ +VA+L    
Sbjct: 178 E-IRVNAVSPGWIDARDPSQRRAEPLSEADH----AQHPAGRVGTVEDVAAMVAWLLSRQ 232

Query: 248 ASYITGQVISIDGGYT 263
           A ++TGQ   +DGG T
Sbjct: 233 AGFVTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 78.6 bits (194), Expect = 4e-17
 Identities = 67/267 (25%), Positives = 107/267 (40%), Gaps = 33/267 (12%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV---------HTCGRDQNMINERIQEWESKG 66
           L G   +VTG   GIG A     A  GA V                +     + E  + G
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 67  FKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMST 126
            +   +  D++  D    L++     F G L++LVNNA ++  +     + EE+ +V+  
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVI-- 120

Query: 127 NVESSYHLCQLAHP------LLKA--SGNASIVFMSSVAGAISIPRLSAYAASKGAINQL 178
            V    H   L H         KA  + +A I+  SS AG         Y+A+K  I  L
Sbjct: 121 AVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAAL 180

Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAE---PNE 235
           T   A E     + VNA++P A  T+++     ++            P     +   P  
Sbjct: 181 TLVAAAELGRYGVTVNAIAP-AARTRMTETVFAEM---------MAKPEEGEFDAMAPEN 230

Query: 236 ISPLVAFLCLPAASYITGQVISIDGGY 262
           +SPLV +L    +  +TG+V  ++GG 
Sbjct: 231 VSPLVVWLGSAESRDVTGKVFEVEGGK 257

Length = 286

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 78.2 bits (193), Expect = 4e-17
 Identities = 77/260 (29%), Positives = 117/260 (45%), Gaps = 21/260 (8%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASVHTC------GRDQNMINERIQEWESKGF 67
           L G  ALVTG    R I + I ++L   GA +         GR +  + E  +      F
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLF 63

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSV 123
                 CD+    Q E+  ET+   + GKL+ILV+  A      ++   +  + E ++  
Sbjct: 64  ----LPCDVQDDAQIEETFETIKQKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARA 118

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
           +  +  S   LC+ A PL+   G  SIV ++ + G  +IP  +    +K A+    + LA
Sbjct: 119 LEISAYSLAPLCKAAKPLMSEGG--SIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLA 176

Query: 184 CEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL 243
            E    +IRVNA+S   + T  S      L +  +V+  A  PL R+    E+    AFL
Sbjct: 177 AELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKA--PLRRTVTQTEVGNTAAFL 234

Query: 244 CLPAASYITGQVISIDGGYT 263
               AS ITGQ I +D GY 
Sbjct: 235 LSDLASGITGQTIYVDAGYC 254

Length = 258

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 77.3 bits (191), Expect = 8e-17
 Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 28/262 (10%)

Query: 15  SLRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNM---INERIQEWESKGFKV 69
            L G   L+ G    R I + I + LA  GA +    + + +   + E  +E  S     
Sbjct: 3   LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLV-- 60

Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVM----KRATEYTLEEYSSVMS 125
               CD++  +  + L  T+   + GKL+ LV++ A            + + E +   M 
Sbjct: 61  --LPCDVTNDESIDALFATIKKKW-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMD 117

Query: 126 TNVESSYHLCQLAH---PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
               S+Y    LA    PL+      SI+ ++ +     +P  +    +K A+    + L
Sbjct: 118 I---SAYSFTALAKAARPLMN--NGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYL 172

Query: 183 ACEWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           A +   + IRVNA+S   + T  +    D   +L  +  +  A  PL R+    E+    
Sbjct: 173 AADLGKEGIRVNAISAGPIRTLAASGIGDFRKML--KENE--ANAPLRRNVTIEEVGNTA 228

Query: 241 AFLCLPAASYITGQVISIDGGY 262
           AFL    +S ITG++I +D GY
Sbjct: 229 AFLLSDLSSGITGEIIYVDSGY 250

Length = 259

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 77.1 bits (190), Expect = 9e-17
 Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 19/255 (7%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFG 79
           A+V GG + +G  +   LA  G  V     +     +   E  ++ G K  G   D +  
Sbjct: 5   AVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADATNE 64

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC--QL 137
                L + V  +F  ++++LV +A +    + T++ L ++   +  N+   Y LC  + 
Sbjct: 65  QSVIALSKGVDEIFK-RVDLLVYSAGIAKSAKITDFELGDFDRSLQVNL-VGYFLCAREF 122

Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
           +  +++      I+ ++S +G +     S Y+A+K     LT++LA + A   I VN++ 
Sbjct: 123 SKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITVNSLM 182

Query: 198 PWAVNTQISPPDLNDLLVQEYVKL-----------IAKTPLARSAEPNEISPLVAFLCLP 246
                  +  P    LL Q   KL           I K PL R  +  ++  ++ F   P
Sbjct: 183 L---GNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP 239

Query: 247 AASYITGQVISIDGG 261
            ASY TGQ I+I GG
Sbjct: 240 KASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 13/195 (6%)

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK----RATEYTLEEYSSVMSTNVE 129
            D+    Q E +   ++  + G+L+ L+++ A    +    R  + + E ++  M  +  
Sbjct: 67  LDVREPGQLEAVFARIAEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCH 125

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S   + +LA PL+   G  S++ MS       +   +     K A+    + LA E    
Sbjct: 126 SFIRMARLAEPLMTNGG--SLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGPK 183

Query: 190 SIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
            IRV+A+SP  + T+ +    D + LL         + PL R  + +++  + AFL   A
Sbjct: 184 GIRVHAISPGPLKTRAASGIDDFDALLE----DAAERAPLRRLVDIDDVGAVAAFLASDA 239

Query: 248 ASYITGQVISIDGGY 262
           A  +TG  + IDGGY
Sbjct: 240 ARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 76.5 bits (189), Expect = 1e-16
 Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 18/193 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSV 73
            ++G   LVTG  RGIG A VE+L   GA+ V+   RD        +     G +V    
Sbjct: 3   DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD-------PESVTDLGPRVVPLQ 55

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT---EYTLEEYSSVMSTNVES 130
            D++         E  S V      ILVNNA   + +  +   E   +   + M TN   
Sbjct: 56  LDVTDPASVAAAAEAASDV-----TILVNNAG--IFRTGSLLLEGDEDALRAEMETNYFG 108

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
              + +   P+L A+G  +IV + SV   ++ P L  Y+ASK A   LT+ L  E A   
Sbjct: 109 PLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQG 168

Query: 191 IRVNAVSPWAVNT 203
            RV  V P  ++T
Sbjct: 169 TRVLGVHPGPIDT 181

Length = 238

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 76.8 bits (189), Expect = 1e-16
 Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 26/262 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFKVTGSVC 74
           L+G   LVTGG  G+G AIV+     GA V    +        +QE E+  G  V G   
Sbjct: 3   LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA----AGLQELEAAHGDAVVGVEG 58

Query: 75  DL-SFGDQREKLIETVSSVFDGKLNILVNNA-------ALVVMKRATEYTLEEYSSVMST 126
           D+ S  D +E +   V++   GK++ L+ NA       ALV +    +   E +  V   
Sbjct: 59  DVRSLDDHKEAVARCVAAF--GKIDCLIPNAGIWDYSTALVDI--PDDRIDEAFDEVFHI 114

Query: 127 NVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           NV+      + A P L AS   S++F  S AG         Y A+K A+  L K LA E 
Sbjct: 115 NVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFEL 173

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK------LIAKTPLARSAEPNEIS-PL 239
           A   +RVN V+P  +++ +  P    +  +          L +  P+ R  +  E +   
Sbjct: 174 AP-YVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAY 232

Query: 240 VAFLCLPAASYITGQVISIDGG 261
           V F         TG V++ DGG
Sbjct: 233 VFFATRGDTVPATGAVLNYDGG 254

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 76.6 bits (189), Expect = 2e-16
 Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 8/179 (4%)

Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
            +TG +RG G A  E     G  V    RD   + +  +++  +   +   V D      
Sbjct: 7   FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD------ 60

Query: 82  REKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           R  +   V +  +  G+L+I+VNNA   +     E T  E  + + TN   +  + Q   
Sbjct: 61  RAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVL 120

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
           P L+   +  I+ +SS+ G  + P    Y ASK A+  +++ LA E A   I+V  V P
Sbjct: 121 PYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEP 179

Length = 275

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 8/196 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV-C 74
            RG  ALVTG + GIG A+   L + G  V  C R  + I     E +S G+       C
Sbjct: 4   WRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQC 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DLS  +Q   +   + +   G +++ +NNA L   +       E +  +   NV +    
Sbjct: 64  DLSNEEQILSMFSAIRTQHQG-VDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSIC 122

Query: 135 CQLAHPLLKASG--NASIVFMSSVAG--AISIPRLSAYAASKGAINQLTKNLACE--WAT 188
            + A+  +K     +  I+ ++S++G     +     YAA+K A+  LT+ L  E   A 
Sbjct: 123 TREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREAK 182

Query: 189 DSIRVNAVSPWAVNTQ 204
             IR  ++SP  V T+
Sbjct: 183 THIRATSISPGLVETE 198

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 74.2 bits (182), Expect = 9e-16
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 5/194 (2%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV- 73
           +L   T LVTG ++G+G  + +  A  GA+V    R Q  + +        G     ++ 
Sbjct: 3   TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIR 62

Query: 74  CDL-SFGD-QREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVES 130
            DL S  + + E+   T++    GKL+ +V+ A     +      T+ E+ +    N  +
Sbjct: 63  FDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVA 122

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT-D 189
              L +   PLLK S +AS++F+    G         + ASK A+N L K  A EW    
Sbjct: 123 PMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFG 182

Query: 190 SIRVNAVSPWAVNT 203
           ++R N + P  +N+
Sbjct: 183 NLRANVLVPGPINS 196

Length = 239

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 1e-15
 Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 24/242 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G   L+TG + GIG A  E+ AR GA+V    R +++++         G       CD
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCD 97

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV---MSTNVESSY 132
           LS  D  + L+  V     G ++IL+NNA   + +R    +L+ +  V   M  N  +  
Sbjct: 98  LSDLDAVDALVADVEKRI-GGVDILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPL 155

Query: 133 HLCQLAHPLLKASGNASIVFMSS---VAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
            L +   P +   G+  I+ +++   ++ A   P  S Y ASK A++ +++ +  EW   
Sbjct: 156 RLIRGLAPGMLERGDGHIINVATWGVLSEA--SPLFSVYNASKAALSAVSRVIETEWGDR 213

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP--------LARSAEPNEISPLVA 241
            +    +    V T +  P       + Y  L A T          A    P  I+P VA
Sbjct: 214 GVHSTTLYYPLVATPMIAP------TKAYDGLPALTADEAAEWMVTAARTRPVRIAPRVA 267

Query: 242 FL 243
             
Sbjct: 268 VA 269

Length = 293

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 73.6 bits (181), Expect = 2e-15
 Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 26/263 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGAS---VH-TCGRDQNMINERIQEWESKGFKVT 70
           SL+G   L+ GG + +G  I  +LA  GA    +H      +    E +   ++ G K  
Sbjct: 5   SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV 64

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
               DL+     EKL +   + F G+ +I +N    V+ K   E +  EY  + + N +S
Sbjct: 65  AFQADLTTAAAVEKLFDDAKAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKS 123

Query: 131 SYHLCQLAHPLLKASGNASIV-FMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           ++   + A   L  + N  IV  ++S+ GA + P  SAYA SK  +   T+  + E+   
Sbjct: 124 AFFFIKEAGRHL--NDNGKIVTLVTSLLGAFT-PFYSAYAGSKAPVEHFTRAASKEFGAR 180

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA--KTPLARSA-------EPNEISPLV 240
            I V AV P  ++T    P       QE  + +A  KT  A S        +  +I P +
Sbjct: 181 GISVTAVGPGPMDTPFFYP-------QEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFI 233

Query: 241 AFLCLPAASYITGQVISIDGGYT 263
            FL +    +ITGQ I I+GGYT
Sbjct: 234 RFL-VTDGWWITGQTILINGGYT 255

Length = 257

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 72.7 bits (179), Expect = 3e-15
 Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 25/250 (10%)

Query: 19  MTA--LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER--IQEWESKGFKVTGSVC 74
           M A  L+TG  + IG A+   L   G  V    R          I      G        
Sbjct: 1   MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYR-----THYPAIDGLRQAG--AQCIQA 53

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D S        I+ +    DG L  +++NA+  + ++      +  + +M  +V + Y L
Sbjct: 54  DFSTNAGIMAFIDELKQHTDG-LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLL 112

Query: 135 CQLAHPLLKASGN--ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
                 LL+  G+  + I+ ++         +  AYAASK A++ +T + A + A   ++
Sbjct: 113 NLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAP-EVK 171

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEY-VKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           VN+++P  +         N+     Y  K +AK+ L       EI  LV +L    + Y+
Sbjct: 172 VNSIAPALIL-------FNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYLL--TSCYV 222

Query: 252 TGQVISIDGG 261
           TG+ + +DGG
Sbjct: 223 TGRSLPVDGG 232

Length = 236

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 72.7 bits (179), Expect = 4e-15
 Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 28/266 (10%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVTGS 72
            L+G T L+TG    IG A+V+ +   G  V     D+  +NE ++    E K  K++  
Sbjct: 1   MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLV 60

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNA---ALVVMKRATEYTLEEYSSVMSTNVE 129
             D++  +  E+ +   +  + GK++  VN A        K+  + +L++++  +S ++ 
Sbjct: 61  ELDITDQESLEEFLSKSAEKY-GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLG 119

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS-----------AYAASKGAINQL 178
           SS+   Q      K  G  ++V +SS+ G +  P+              YAA K  I  L
Sbjct: 120 SSFLFSQQFAKYFKKQGGGNLVNISSIYG-VVAPKFEIYEGTSMTSPVEYAAIKAGIIHL 178

Query: 179 TKNLACEWATDSIRVNAVSPWAV-NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEIS 237
           TK LA  +   +IRVN VSP  + + Q       +  +  Y K           +P++I 
Sbjct: 179 TKYLAKYFKDSNIRVNCVSPGGILDNQ------PEAFLNAYKK---CCNGKGMLDPDDIC 229

Query: 238 PLVAFLCLPAASYITGQVISIDGGYT 263
             + FL    + YITGQ I +D G++
Sbjct: 230 GTLVFLLSDQSKYITGQNIIVDDGFS 255

Length = 256

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 72.6 bits (179), Expect = 5e-15
 Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 9/185 (4%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            ALVTG + GIG A  E+LAR G  V    R+                 V     D++  
Sbjct: 6   VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPG--------VELLELDVTDD 57

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
              +  ++ V +   G++++LVNNA + +   A E ++ +  ++  TNV     + +   
Sbjct: 58  ASVQAAVDEVIARA-GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVL 116

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P ++A G+  I+ +SSV G +  P ++ YAASK A+   +++L  E     IRV+ V P 
Sbjct: 117 PHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPA 176

Query: 200 AVNTQ 204
              T 
Sbjct: 177 YTKTN 181

Length = 270

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.7 bits (182), Expect = 5e-15
 Identities = 83/282 (29%), Positives = 123/282 (43%), Gaps = 64/282 (22%)

Query: 2   AEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTC------GRDQNMI 55
           A+AA P   D+   L G  ALVTG  RGIG AI E LAR GA V  C      G     +
Sbjct: 196 ADAAPPADWDR--PLAGKVALVTGAARGIGAAIAEVLARDGAHV-VCLDVPAAGEALAAV 252

Query: 56  NERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVM 109
             R+          T    D++  D   ++ E ++    G L+I+V+NA       L  M
Sbjct: 253 ANRV--------GGTALALDITAPDAPARIAEHLAERH-GGLDIVVHNAGITRDKTLANM 303

Query: 110 KRATEYTLEEYSSVMSTNVESSYHLCQ--LAHPLLKASGNASIVFMSSVAGAISIPR-LS 166
             A       + SV++ N+ +   + +  LA   L       IV +SS++G I+  R  +
Sbjct: 304 DEA------RWDSVLAVNLLAPLRITEALLAAGALGD--GGRIVGVSSISG-IAGNRGQT 354

Query: 167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP 226
            YAASK  +  L + LA   A   I +NAV+P  + TQ++                A  P
Sbjct: 355 NYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMT----------------AAIP 398

Query: 227 LA-RSA-----------EPNEISPLVAFLCLPAASYITGQVI 256
            A R A            P +++  +A+L  PA+  +TG V+
Sbjct: 399 FATREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNVV 440

Length = 450

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 72.0 bits (177), Expect = 6e-15
 Identities = 57/187 (30%), Positives = 84/187 (44%), Gaps = 6/187 (3%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           + L+TG + GIG     EL R G  V    R      + +    S GF  TG + DL   
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRVLAACRKP----DDVARMNSLGF--TGILLDLDDP 57

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           +  E+  + V ++ D +L  L NNA   V    +  + ++     STN   ++ L  L  
Sbjct: 58  ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLL 117

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P +   G   IV  SSV G IS P   AYAASK A+   +  L  E     I+V+ + P 
Sbjct: 118 PAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPG 177

Query: 200 AVNTQIS 206
            + T+ +
Sbjct: 178 PIRTRFT 184

Length = 256

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 72.0 bits (177), Expect = 9e-15
 Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 14/193 (7%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRD---QNMINERIQEWESKGFKVTGS--VC 74
            A+VTG + G G     ELA+ G  V    R+   Q  +  +  +       +  +  V 
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQ-----LNLQQNIKVQ 59

Query: 75  DLSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
            L   DQ    I     V    G++++LVNNA         E  +EEY     TNV  + 
Sbjct: 60  QLDVTDQNS--IHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAI 117

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
            + Q   P ++   +  I+ +SS++G +  P LS Y +SK A+   +++L  E     I 
Sbjct: 118 SVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGID 177

Query: 193 VNAVSPWAVNTQI 205
           V  + P + NT I
Sbjct: 178 VALIEPGSYNTNI 190

Length = 280

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 2e-14
 Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 26/201 (12%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-------QNMINERIQEWESKGF 67
           SL G T  +TG +RGIG AI    AR GA++    +           I+   +E E+ G 
Sbjct: 3   SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG 62

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
           +    V D+   DQ    +      F G ++I VNNA+ + +    +  ++ +  +   N
Sbjct: 63  QALPLVGDVRDEDQVAAAVAKAVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQIN 121

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS----------AYAASKGAINQ 177
           V  ++ + Q   P LK S N  I+ +S        P L+          AY  +K  ++ 
Sbjct: 122 VRGTFLVSQACLPHLKKSENPHILTLS--------PPLNLDPKWFAPHTAYTMAKYGMSL 173

Query: 178 LTKNLACEWATDSIRVNAVSP 198
            T  LA E+  D I VNA+ P
Sbjct: 174 CTLGLAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 71.2 bits (175), Expect = 2e-14
 Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 11/182 (6%)

Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQN-----MINERIQEWESKGFKVTGSVCDL 76
           ++TG   G+G AI    AR G  +     D N        + ++E    GF      CD+
Sbjct: 4   MITGAASGLGRAIALRWAREGWRL--ALADVNEEGGEETLKLLREAGGDGFYQR---CDV 58

Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
               Q   L +     + G ++++VNNA +       E +LE++   ++ N+      C+
Sbjct: 59  RDYSQLTALAQACEEKWGG-IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCK 117

Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
              PL K   +  IV ++S+AG +  P +S+Y  +K  +  L++ L  E A D I V+ V
Sbjct: 118 AFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVV 177

Query: 197 SP 198
            P
Sbjct: 178 CP 179

Length = 270

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 2e-14
 Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 168 YAASKGAINQLTKNLACEWATD-SIRVNAVSPWAVNTQISPPDLNDL---LVQEYVKLIA 223
           Y  SK A+   T   A  W     IRVN V+P  V T I    L D    L QE V   A
Sbjct: 137 YQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPI----LGDFRSMLGQERVDSDA 192

Query: 224 KTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG 265
           K  + R A  +E + ++ FLC  AA +I G  + +DGG  A 
Sbjct: 193 K-RMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGLAAT 233

Length = 241

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 70.1 bits (172), Expect = 3e-14
 Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 9/214 (4%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC-DLS 77
               VTG   GIG A    LA  GA +    RD + + + + +  + G  V      D+S
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ- 136
             D        + +   G +++++N A +         T E++  ++  N+    H+ + 
Sbjct: 61  DYDAVAAFAADIHAAH-GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIET 119

Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
              P++ A     +V +SS AG +++P  +AY+ASK  +  L++ L  + A   I V+ V
Sbjct: 120 FVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVV 179

Query: 197 SPWAVNT------QISPPDLNDLLVQEYVKLIAK 224
            P AV T      +I+  D  D  VQ++V     
Sbjct: 180 VPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRG 213

Length = 272

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 70.2 bits (172), Expect = 4e-14
 Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
             L+TG + GIG A+ +     G  V    R      E ++   + GF  T    D++ G
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKA----EDVEALAAAGF--TAVQLDVNDG 56

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
               +L E + +   G L++L+NNA    M    +  +E       TNV +   + +   
Sbjct: 57  AALARLAEELEAEH-GGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALF 115

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           PLL+      +V + SV+G +  P   AY ASK A++ L+  L  E A   ++V  V P 
Sbjct: 116 PLLR-RSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPG 174

Query: 200 AVNTQ 204
           A+ +Q
Sbjct: 175 AIASQ 179

Length = 274

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 55/243 (22%), Positives = 91/243 (37%), Gaps = 20/243 (8%)

Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
           LV GG+ GIG A+    A  GA V    R ++ +    +        V  +  D++    
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGA-PVRTAALDITDEAA 59

Query: 82  REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPL 141
            +           G  + +V  AA           L    + M +    +Y + + A   
Sbjct: 60  VDAFFAEA-----GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR-- 112

Query: 142 LKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAV 201
           +   G  S+ F+S  A            A   A+  L + LA E A   +RVN VSP  V
Sbjct: 113 IAPGG--SLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA--PVRVNTVSPGLV 168

Query: 202 NTQI---SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISI 258
           +T +      D  +     +     + P  R  +P +++  + FL   A  + TG  + +
Sbjct: 169 DTPLWSKLAGDARE---AMFAAAAERLPARRVGQPEDVANAILFLA--ANGFTTGSTVLV 223

Query: 259 DGG 261
           DGG
Sbjct: 224 DGG 226

Length = 230

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 56/199 (28%), Positives = 82/199 (41%), Gaps = 3/199 (1%)

Query: 8   VFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF 67
           V   +     G   +VTG   GIG       AR GA V     D+       +   + G 
Sbjct: 306 VGRPRG-PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGA 364

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
                  D+S  D  E   E V +   G  +I+VNNA + +     + + E++  V+  N
Sbjct: 365 VAHAYRVDVSDADAMEAFAEWVRAEH-GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVN 423

Query: 128 VESSYHLCQLAHPLLKASGNAS-IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           +    H C+L    +   G    IV ++S A       L AYA SK A+  L++ L  E 
Sbjct: 424 LWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAEL 483

Query: 187 ATDSIRVNAVSPWAVNTQI 205
           A   I V A+ P  V+T I
Sbjct: 484 AAAGIGVTAICPGFVDTNI 502

Length = 582

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 68.5 bits (168), Expect = 1e-13
 Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 9/199 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G  A++TG   G G A     A  G  +      Q+ ++  + E  ++G +V G   D
Sbjct: 4   FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S   Q E L +     F G +++L NNA +       E +L ++  V+  N+    H  
Sbjct: 64  VSDAAQVEALADAALERF-GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGV 122

Query: 136 QLAHPLLKASGNAS------IVFMSSVAGAISIPRLSAYAASKGAINQLTKNL--ACEWA 187
           +   PL+ A+          IV  +S+AG ++ P +  Y  SK A+  LT+ L       
Sbjct: 123 RAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLV 182

Query: 188 TDSIRVNAVSPWAVNTQIS 206
           TD +  + + P+ V T I 
Sbjct: 183 TDQVGASVLCPYFVPTGIW 201

Length = 287

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 11/155 (7%)

Query: 22  LVTGGTRGIGYAIVEELAR-FGASVHTCGR-----DQNMINERIQEWESKGFKVTGSVCD 75
           LVTGG  GIG A+   LAR +GA +   GR     ++    + +   E+ G +V     D
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISAD 268

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++      +L+E V   + G ++ +++ A ++      + T E++ +V++  V+   +L 
Sbjct: 269 VTDAAAVRRLLEKVRERY-GAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPKVDGLLNLA 327

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA 170
           Q     L        V  SSV+        + YAA
Sbjct: 328 Q----ALADEPLDFFVLFSSVSAFFGGAGQADYAA 358

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 26/200 (13%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-------MINERIQEWESKGFK 68
           L G T  +TG +RGIG AI  + AR GA+V    +           I    +E E+ G K
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
               + D+   DQ    +E     F G ++ILVNNA+ + +    +  ++ Y  +M  N 
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGG-IDILVNNASAISLTGTLDTPMKRYDLMMGVNT 119

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS----------AYAASKGAINQL 178
             +Y   +   P LK S N  I+ +S        P L+          AY  +K  ++  
Sbjct: 120 RGTYLCSKACLPYLKKSKNPHILNLS--------PPLNLNPKWFKNHTAYTMAKYGMSMC 171

Query: 179 TKNLACEWATDSIRVNAVSP 198
              +A E+    I VNA+ P
Sbjct: 172 VLGMAEEFKPGGIAVNALWP 191

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 66.0 bits (162), Expect = 3e-13
 Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 11/156 (7%)

Query: 20  TALVTGGTRGIGYAIVEELARFGA-SVHTCGR---DQNMINERIQEWESKGFKVTGSVCD 75
           T L+TGG  G+G A+   LA  GA  +    R   D       + E E+ G +VT   CD
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  D    ++  + +V  G L  +++ A ++        T E +++V++     +++L 
Sbjct: 62  VADRDALAAVLAAIPAVE-GPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNLH 120

Query: 136 QLAHPL-LKASGNASIVFMSSVAGAISIPRLSAYAA 170
           +L   L L        V  SS+AG +  P  + YAA
Sbjct: 121 ELTADLPLDF-----FVLFSSIAGVLGSPGQANYAA 151

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 67.1 bits (164), Expect = 3e-13
 Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 19/261 (7%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           M  LVT  +RGIG+ +  EL + GA V    R++  + + ++E +  G +V     DLS 
Sbjct: 1   MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSD 59

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEE--YSSVMSTN----VESSY 132
            D  + L++    +  G ++ LV NA  V   R     L E  YS  +       V   Y
Sbjct: 60  KDDLKNLVKEAWELL-GGIDALVWNAGNV---RCEPCMLHEAGYSDWLEAALLHLVAPGY 115

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
               L    L+      +V++SSV+    +P L     ++  + QL K ++  +    IR
Sbjct: 116 LTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIR 175

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYV--------KLIAKTPLARSAEPNEISPLVAFLC 244
              V   + +T  +  +L  +  +  V        +++ +TPL R+    E+  L+AFL 
Sbjct: 176 AYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLL 235

Query: 245 LPAASYITGQVISIDGGYTAG 265
              A Y+ G  I  DG  T G
Sbjct: 236 SENAEYMLGSTIVFDGAMTRG 256

Length = 259

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 25/198 (12%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
            ++TG ++G+G AI  +L   G  V +  R +N   E  +  E     +T    DL    
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTEN--KELTKLAEQYNSNLTFHSLDLQDVH 61

Query: 81  QREKLIETV-SSVF-DGKLNI-LVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           + E     + SS+  D   +I L+NNA +V  +K   +   EE        + ++ HL  
Sbjct: 62  ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEE--------LITNVHLNL 113

Query: 137 LAHPLLKA---------SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           LA  +L +           +  ++ +SS A        SAY +SK  ++  T+ +A E  
Sbjct: 114 LAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQE 173

Query: 188 --TDSIRVNAVSPWAVNT 203
                +++ A SP  ++T
Sbjct: 174 EEEYPVKIVAFSPGVMDT 191

Length = 251

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 47/207 (22%), Positives = 79/207 (38%), Gaps = 43/207 (20%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
             L+TG + GIG  +   LA           D            SK FKV  ++ DL   
Sbjct: 2   VVLITGCSSGIGLHLAVRLAS----------D-----------PSKRFKVYATMRDLKKK 40

Query: 80  DQ-----REKLIET-----------------VSSVFDGKLNILVNNAALVVMKRATEYTL 117
            +           T                 V  V +  +++LV NA + ++      + 
Sbjct: 41  GRLWEAAGALAGGTLETLQLDVCDSKSVAAAVERVTERHVDVLVCNAGVGLLGPLEALSE 100

Query: 118 EEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ 177
           +  +SV   NV  +  + Q   P +K  G+  I+  SSV G   +P    Y ASK A+  
Sbjct: 101 DAMASVFDVNVFGTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEG 160

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQ 204
           L ++LA +    ++ ++ +    V+T 
Sbjct: 161 LCESLAVQLLPFNVHLSLIECGPVHTA 187

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 8e-12
 Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 2/190 (1%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G   ++TG + GIG A  E  AR GA +    RD+  +    +E  + G +V     
Sbjct: 4   PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPT 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  DQ + L    +S F G++++ VNN  +  + R  E  +E +  V+ TN+      
Sbjct: 64  DVTDADQVKALATQAAS-FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRD 122

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD-SIRV 193
              A P+ K  G+   + M S+ G  + P  +AY+ASK  +   ++ L  E A    I V
Sbjct: 123 AHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHV 182

Query: 194 NAVSPWAVNT 203
             V P  ++T
Sbjct: 183 CDVYPAFMDT 192

Length = 330

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 45/184 (24%), Positives = 68/184 (36%), Gaps = 27/184 (14%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV-CDLSFG 79
            +V G T  IG A+ + L+  G  V T GR                    G    D++  
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRSS------------------GDYQVDITDE 42

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
              + L E V     G  + +V+ A         E T  ++   +++ +    +L +   
Sbjct: 43  ASIKALFEKV-----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGL 97

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P L   G  SI   S +     IP  +A A   GA+    +  A E     IR+NAVSP 
Sbjct: 98  PYLNDGG--SITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIE-LPRGIRINAVSPG 154

Query: 200 AVNT 203
            V  
Sbjct: 155 VVEE 158

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 72/286 (25%), Positives = 110/286 (38%), Gaps = 66/286 (23%)

Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
           +V  G  GIG AI   +   G  V     ++  +    +     GF V+    D+S  + 
Sbjct: 5   VVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES 63

Query: 82  REKLIETVSSVFDGKLNILVNNAA-----------LVVMKRATEYTLEEYSSVMSTNVES 130
            + L  T  ++  G +  LV+ A            L V    T   LEE+  V+      
Sbjct: 64  VKALAATAQTL--GPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVI------ 115

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGA---------------------ISIP------ 163
                        A G A +V ++S +G                      +S+P      
Sbjct: 116 -------------APGGAGVV-IASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDA 161

Query: 164 ---RLSAYAASKGAINQL-TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV 219
               L AY  +K A N L     A +W     R+N++SP  ++T ++  +LN      Y 
Sbjct: 162 IEDSLHAYQIAKRA-NALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYR 220

Query: 220 KLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG 265
            + AK+P  R   P+EI+ L  FL  P  S+ITG    +DGG TA 
Sbjct: 221 NMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS 266

Length = 275

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 54/242 (22%), Positives = 96/242 (39%), Gaps = 28/242 (11%)

Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
           LV GG   +G A+V+     G  V     D    NE           V  S    SF +Q
Sbjct: 5   LVYGGRGALGSAVVQAFKSRGWWV--ASIDLA-ENEE----ADASIIVLDSD---SFTEQ 54

Query: 82  REKLIETVSSVFDGKLNILVNNAALVVMKRATEYT-LEEYSSVMSTNVESSYHLCQLAHP 140
            ++++ +V+ +  GK++ L+  A       A   + ++ +  +   N+ +S+    LA  
Sbjct: 55  AKQVVASVARLS-GKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLATK 113

Query: 141 LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW--ATDSIRVNAVSP 198
            L + G   +V   + A     P +  Y A+K A++QLT++LA E          NA+ P
Sbjct: 114 HLLSGG--LLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAILP 171

Query: 199 WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISI 258
             ++T  +   + D     +                 I+ L+ F    AA   +G +I +
Sbjct: 172 VTLDTPANRKAMPDADFSSWTP------------LEFIAELILFWASGAARPKSGSLIPV 219

Query: 259 DG 260
             
Sbjct: 220 VT 221

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 60.7 bits (148), Expect = 8e-11
 Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 7/184 (3%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            ALVTG + GIG A    LA  G +V+   R      +++++  S G        D++  
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTVYGAARRV----DKMEDLASLGVHPLS--LDVTDE 58

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
              +  ++T+ +  +G++++LVNNA         +  ++E       N+  +  L QL  
Sbjct: 59  ASIKAAVDTIIAE-EGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVL 117

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P ++A  +  I+ +SS+ G I  P  + Y A+K A+   +  L  E A   I V  + P 
Sbjct: 118 PHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPG 177

Query: 200 AVNT 203
            + T
Sbjct: 178 GIKT 181

Length = 273

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 59/202 (29%), Positives = 82/202 (40%), Gaps = 17/202 (8%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVTGSVCD 75
           G T ++TG   GIG     ELAR GA V    RD     E   E   ++   +V     D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           L+             +  D +L++L+NNA   VM+     T + +      N    + L 
Sbjct: 61  LASLKSIRAFAAEFLAEED-RLDVLINNAG--VMRCPYSKTEDGFEMQFGVNHLGHFLLT 117

Query: 136 QLAHPLLKASGNASIVFMSSVA---GAI---------SIPRLSAYAASKGAINQLTKNLA 183
            L   LLK S  + IV +SS+A   G I         S     AY  SK A    T+ LA
Sbjct: 118 NLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKLANVLFTRELA 177

Query: 184 CEWATDSIRVNAVSPWAVNTQI 205
                  + VNA+ P  V T++
Sbjct: 178 RRLQGTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 59.1 bits (143), Expect = 3e-10
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 7/195 (3%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT--GSVCD 75
           G  ALVTG T GIG     +LAR G ++    R+ + + +     +SK  K      V D
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALV--VMKRATEYTLEEYSSVMSTNVESSYH 133
            S GD  E +     ++    + +L+NN  +     +   E   E   +++  NVE +  
Sbjct: 113 FS-GDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTK 171

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAI--SIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           + Q   P +      +I+ + S A  +  S P  + YAA+K  I+Q ++ L  E+    I
Sbjct: 172 VTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGI 231

Query: 192 RVNAVSPWAVNTQIS 206
            V    P  V T+++
Sbjct: 232 DVQCQVPLYVATKMA 246

Length = 320

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 56.4 bits (136), Expect = 9e-10
 Identities = 50/227 (22%), Positives = 78/227 (34%), Gaps = 49/227 (21%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
            LVTGG+ GIG AI   LA  G+                        KV           
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGS-----------------------PKV----------- 26

Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
                      +   + +++V+NAA++   R  + T       +  NV  +  L + A  
Sbjct: 27  -----------LVVSRRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARE 75

Query: 141 LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA 200
           L+KA      + +SSVAG    P L  YAASK A++ L +  A E   + +   AV+   
Sbjct: 76  LMKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGT 135

Query: 201 VNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
                               L  +    R+  P E++  +       
Sbjct: 136 WAGSGMAKGPVAPE----EILGNRRHGVRTMPPEEVARALLNALDRP 178

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 100 LVNNAALVVMKRATEY-TLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG 158
           LVNNA ++      E   +++Y   M  N+  +  + +   PLL+ +    +V +SS+ G
Sbjct: 82  LVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTKAFLPLLRRA-KGRVVNVSSMGG 140

Query: 159 AISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEY 218
            +  P   AY ASK A+   + +L  E     ++V+ + P    T I+    ++L  ++ 
Sbjct: 141 RVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVKVSIIEPGNFKTGIT--GNSELWEKQA 198

Query: 219 VKLIAKTP 226
            KL  + P
Sbjct: 199 KKLWERLP 206

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 7/184 (3%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           T L+TG   G G  +   LAR G +V    +    +     E   +G  +     DL+  
Sbjct: 4   TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA 63

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
             R +  E     +D  +++L+NNA +       +  +E    +  TNV     L Q   
Sbjct: 64  IDRAQAAE-----WD--VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFV 116

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
             + A G   +VF SS+AG I+ P   AY ASK A+  + + +  E     I+V  V+P 
Sbjct: 117 RKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPG 176

Query: 200 AVNT 203
              T
Sbjct: 177 PYLT 180

Length = 257

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 20/192 (10%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKGFKVTGSVCDLSF 78
           TAL+ G +RG+G  +V+ L   G  V    R  Q   +  +Q        V     D+  
Sbjct: 3   TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ--DTALQALP----GVHIEKLDM-- 54

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHL 134
            +    L + +  +   + ++L  NA   +     + A + T  E   +  TN  +   L
Sbjct: 55  -NDPASLDQLLQRLQGQRFDLLFVNAG--ISGPAHQSAADATAAEIGQLFLTNAIAPIRL 111

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIP---RLSAYAASKGAINQLTKNLACEWATDSI 191
            +     ++  G   + FMSS  G++ +P    +  Y ASK A+N +T++   E    ++
Sbjct: 112 ARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTL 170

Query: 192 RVNAVSPWAVNT 203
            V ++ P  V T
Sbjct: 171 TVLSMHPGWVKT 182

Length = 225

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 18/191 (9%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW---ESKGFKVTGSVCDL 76
             L+TG T GIG  +  + A+ G  V  CGR+Q++++E   +     +  F VT      
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVT------ 56

Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRA-TEYTLEEYSSVMSTNVESSYHLC 135
                       +S +       + N      M     + TL   + V + NV    +  
Sbjct: 57  ----DHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATL--MARVFNVNVLGVANCI 110

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P L       IV   S+A  +++PR  AY ASK A+    + L  +     I V  
Sbjct: 111 EGIQPHLSCGHRVVIV--GSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVT 168

Query: 196 VSPWAVNTQIS 206
           V P  V T ++
Sbjct: 169 VFPGFVATPLT 179

Length = 240

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 2/123 (1%)

Query: 87  ETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA 144
             V   F   G+++++V+NA   +   A E +  +    + TN+  S  + + A P L+ 
Sbjct: 65  AVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRR 124

Query: 145 SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQ 204
            G   IV +SS  G I+ P  S Y A+K  I    + +A E A   I    V P    T 
Sbjct: 125 QGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTN 184

Query: 205 ISP 207
              
Sbjct: 185 FGA 187

Length = 276

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 55.7 bits (134), Expect = 3e-09
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 5/140 (3%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVTGSVCD 75
           G + L+TG   GIG A    +A+ G +VH   R+Q    E  +E   ES    +   + D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S   Q  + +E        KL++L+NNA  +V KR  E T +      +TN   +Y L 
Sbjct: 61  MSDPKQVWEFVEEFKEEGK-KLHVLINNAGCMVNKR--ELTEDGLEKNFATNTLGTYILT 117

Query: 136 QLAHPLLKASGNASIVFMSS 155
               P+L+   +  ++ +SS
Sbjct: 118 THLIPVLEKEEDPRVITVSS 137

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score = 55.5 bits (134), Expect = 4e-09
 Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)

Query: 19  MTALVTGGTRGIGYAIVEEL-ARF-GASVHTCGRDQ--NMINERIQEWESKGFKVTGSVC 74
           M  L+ GG+ GIG A+V++L  R+  A+VH   R    +  ++ +Q W +        V 
Sbjct: 1   MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQHDNVQ-WHAL------DVT 53

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK-RATEYTLEEYSS-----VMSTNV 128
           D       E  I+ +S  F  +L+ L+N   ++  + +  E +L+   +      ++ N 
Sbjct: 54  D-------EAEIKQLSEQFT-QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNT 105

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS---AYAASKGAINQLTKNLACE 185
             S  L +   P LK S +A    +S+  G+IS  RL    +Y ASK A+N   K L+ E
Sbjct: 106 LPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIE 165

Query: 186 WATDSIR---VNAVSPWAVNTQISPP 208
           W   S++   V A+ P   +T +S P
Sbjct: 166 WQR-SLKHGVVLALHPGTTDTALSKP 190

Length = 235

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 55.7 bits (134), Expect = 4e-09
 Identities = 42/173 (24%), Positives = 66/173 (38%), Gaps = 34/173 (19%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           M  LVTGG   IG  +VE L   G  V    R ++ ++  +         V   V DL+ 
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSG-------VEFVVLDLTD 53

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
            D  ++L + V           ++ AA        +    + +  +  NV+ + +L + A
Sbjct: 54  RDLVDELAKGVPDAV-------IHLAAQS---SVPDSNASDPAEFLDVNVDGTLNLLEAA 103

Query: 139 HPLLKASGNASIVFMSSVAGAISIPR-------------LSAYAASKGAINQL 178
               +A+G    VF SSV+     P              L+ Y  SK A  QL
Sbjct: 104 ----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQL 152

Length = 314

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 7/181 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE--WESKGFKVTGS 72
           SL G   +VTG  RGIG  +   L   GA +     ++  +     E   + +   V   
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD 65

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           V DL      +   E     F G ++++V NA +       +   + +  V+  N+   +
Sbjct: 66  VTDL---AAMQAAAEEAVERF-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVF 121

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           H  +   P L       ++ +SS+A   + P ++AY ASK  +      L  E A   + 
Sbjct: 122 HTVRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVT 180

Query: 193 V 193
           V
Sbjct: 181 V 181

Length = 296

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 53.7 bits (130), Expect = 8e-09
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 9/155 (5%)

Query: 20  TALVTGGTRGIGYAIVEELARFGAS----VHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           T LVTGG  G+G  +   LA  GA     +   G         + E E++G +VT   CD
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S  D    L+  + +     L  +++ A ++        T E+++ V++  V  +++L 
Sbjct: 62  VSDRDAVRALLAEIRADG-PPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWNL- 119

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA 170
              H   +       V  SS+AG +  P  + YAA
Sbjct: 120 ---HEATRDRPLDFFVLFSSIAGVLGSPGQANYAA 151

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 14/183 (7%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           AL+ G T GIG A+   LA  G  +   GRD   +     E  +          D++   
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALA-----RPADVAAEL 55

Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           +   L +       G L++LV  A  ++ K         +  ++  N+  +  +  L H 
Sbjct: 56  EVWALAQE-----LGPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALV--LKHA 108

Query: 141 LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA 200
           L   +  A +VF+ +    + +P LSAYAA+K A+    +    E     +R+  V P A
Sbjct: 109 LALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEV--RGLRLTLVRPPA 166

Query: 201 VNT 203
           V+T
Sbjct: 167 VDT 169

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 17/141 (12%)

Query: 130 SSYHLCQLAH---PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           S+Y L  +A     L+   G  SIV ++ + G   +   +    +K ++    K LA + 
Sbjct: 122 SAYSLTAVAREAKKLMTEGG--SIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDL 179

Query: 187 ATDSIRVNAVSPWAVNT----QISPPDLNDLLVQEYVKLI-AKTPLARSAEPNEISPLVA 241
             D IRVNA+S   + T     +     N +L     K I  + PL R+    E+    A
Sbjct: 180 GKDGIRVNAISAGPIRTLSAKGVG--GFNSIL-----KEIEERAPLRRTTTQEEVGDTAA 232

Query: 242 FLCLPAASYITGQVISIDGGY 262
           FL    +  +TG+ I +D GY
Sbjct: 233 FLFSDLSRGVTGENIHVDSGY 253

Length = 257

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 16/205 (7%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFKVTGSVCDLSF 78
           T L+TG + G G A+ +     G  V    R +        ++E+    +    + D++ 
Sbjct: 6   TWLITGVSSGFGRALAQAALAAGHRVVGTVRSE----AARADFEALHPDRALARLLDVTD 61

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
            D  + ++    + F G +++LVNNA         E  L E       NV  +  + +  
Sbjct: 62  FDAIDAVVADAEATF-GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAV 120

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
            P ++A     IV ++S+ G I++P +  Y  SK A+  ++++LA E A   I V AV P
Sbjct: 121 LPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEP 180

Query: 199 ------WA----VNTQISPPDLNDL 213
                 WA    V T  S  D + L
Sbjct: 181 GSFRTDWAGRSMVRTPRSIADYDAL 205

Length = 277

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 7e-08
 Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 16/191 (8%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           + L+TG + GIG      L   G  V  TC ++++     +   E++G  +     D + 
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVFATCRKEED-----VAALEAEG--LEAFQLDYAE 58

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAAL----VVMKRATEYTLEEYSSVMSTNVESSYHL 134
            +    L+  V  +  G+L+ L NN A      V    TE    ++      N    + L
Sbjct: 59  PESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFE----ANFFGWHDL 114

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +   P+++  G   IV  SS+ G + +    AY ASK AI  L+  L  E     I V+
Sbjct: 115 TRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVS 174

Query: 195 AVSPWAVNTQI 205
            + P  + T+ 
Sbjct: 175 LIEPGPIETRF 185

Length = 277

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 15/139 (10%)

Query: 130 SSYHL---CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           S+Y L    + A PLL     ASIV ++      +IP  +    +K A+    + LA + 
Sbjct: 118 SAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDL 175

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLI----AKTPLARSAEPNEISPLVAF 242
               IRVNA+S  AV T      L    ++ +  L+    ++T         E+    AF
Sbjct: 176 GKKGIRVNAISAGAVKT------LAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAF 229

Query: 243 LCLPAASYITGQVISIDGG 261
           L    ++ +TG +I +D G
Sbjct: 230 LLSDLSTGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 41/175 (23%), Positives = 63/175 (36%), Gaps = 2/175 (1%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE-RIQEWESKGFKVTGSVCDLSF 78
            A V G   G+G AI    A  G SV    R +  +    +      G        D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
            D+   L + +     G L +LV NA   V     E T   +  V        +   + A
Sbjct: 61  EDEVIALFDLIEEEI-GPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREA 119

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
              + A G  +I+F  + A        +A+A +K A+  L +++A E     I V
Sbjct: 120 AKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 36/252 (14%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           +  LVTGG   +G  I E     G  V   G  ++ +     E  +K   V   VCD + 
Sbjct: 1   VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL-----EVAAKELDVDAIVCDNTD 55

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTL----EEYSSVMSTNVESSYH 133
                  +E    +F   L+ +VN  A          Y+L      + + +   V S+  
Sbjct: 56  PAS----LEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVL 111

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
             Q     L++ G  SI+   SV    + P  SA AA K A++  T   A  + T  I +
Sbjct: 112 TVQSVGDHLRSGG--SII---SVV-PENPPAGSAEAAIKAALSNWTAGQAAVFGTRGITI 165

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NAV+                 VQ     +++TP   +AE   I+ L  FL  PAA +ITG
Sbjct: 166 NAVACGRS-------------VQPGYDGLSRTPPPVAAE---IARLALFLTTPAARHITG 209

Query: 254 QVISIDGGYTAG 265
           Q + +  G  A 
Sbjct: 210 QTLHVSHGALAH 221

Length = 223

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.6 bits (118), Expect = 4e-07
 Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 24/261 (9%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGS 72
           L+G   L+TG    R I Y I +     GA +  T   D+  + ER+++  ++       
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK--LEERVRKMAAELDSELVF 61

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE--- 129
            CD++  D+  ++   +   +DG L+ LV++      K A      +  S  + N     
Sbjct: 62  RCDVASDDEINQVFADLGKHWDG-LDGLVHSIGFAP-KEALSGDFLDSISREAFNTAHEI 119

Query: 130 SSYH---LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           S+Y    L + A P+++   N++IV +S +    +IP  +    +K ++    +  A   
Sbjct: 120 SAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACL 178

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLI----AKTPLARSAEPNEISPLVAF 242
             + IR N +S   + T      L    + ++ KL+    A  PL R+    E+    AF
Sbjct: 179 GKEGIRCNGISAGPIKT------LAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAF 232

Query: 243 LCLPAASYITGQVISIDGGYT 263
           L    +S ITG++  +DGGY+
Sbjct: 233 LLSDLSSGITGEITYVDGGYS 253

Length = 261

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 31/174 (17%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER---------IQEWESK 65
            L G TALVTG +RGIG    + LA  GA V        ++N R         + E E+ 
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHV--------VVNYRQKAPRANKVVAEIEAA 54

Query: 66  GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMS 125
           G + +    DL+  +    L++T    F G L+ LV NA+   M+   +   E+Y+  M 
Sbjct: 55  GGRASAVGADLTDEESVAALMDTAREEF-GGLDALVLNAS-GGMESGMD---EDYA--MR 107

Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSS-----VAGAISIPRLSAYAASKGA 174
            N ++  +L + A PL+ A     +VF++S     +    ++P     A SK A
Sbjct: 108 LNRDAQRNLARAALPLMPAGSR--VVFVTSHQAHFIPTVKTMPEYEPVARSKRA 159

Length = 248

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.4 bits (118), Expect = 5e-07
 Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 19/198 (9%)

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSVMSTNVE 129
            D+S  +  + L E++     GK++ +V++ A      +     E + E ++  M  +V 
Sbjct: 62  LDVSKPEHFKSLAESLKKDL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVY 120

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S   L +   PLL  +  AS++ +S + G   +P  +    +K A+    + LA +    
Sbjct: 121 SLIELTRALLPLL--NDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKK 178

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK-----TPLARSAEPNEISPLVAFLC 244
            IRVNA+S   + T ++   + D       ++I K      PL ++    E+     +L 
Sbjct: 179 GIRVNAISAGPIKT-LAASGIGDF------RMILKWNEINAPLKKNVSIEEVGNSGMYLL 231

Query: 245 LPAASYITGQVISIDGGY 262
              +S +TG++  +D GY
Sbjct: 232 SDLSSGVTGEIHYVDAGY 249

Length = 274

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 9/183 (4%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           M  LVTG T G G  I     + G  V   GR Q  + E   E     +     V +   
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRN--- 57

Query: 79  GDQREKLIETVSSVFDG--KLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLC 135
              R  + E ++S+      +++LVNNA L + ++ A + ++E++ +++ TN +   ++ 
Sbjct: 58  ---RAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMT 114

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P +    +  I+ + S AG+      + Y A+K  + Q + NL  +    ++RV  
Sbjct: 115 RAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTD 174

Query: 196 VSP 198
           + P
Sbjct: 175 IEP 177

Length = 248

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 18/188 (9%)

Query: 87  ETVSSVFD------GKLNILVNNAALV----VMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           +++S++FD      G  + L++  A      +  R  + +LE + + +  +  S   L +
Sbjct: 71  KSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSR 130

Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
            A  L+   G  SIV ++       IP  +    +K A+    K LA +   ++IRVNA+
Sbjct: 131 SAEALMHDGG--SIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAI 188

Query: 197 SPWAVNTQISPP--DLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           S   + T  S    D + +L        A  PL R+    ++     +L    +  +TG+
Sbjct: 189 SAGPIKTLASSAIGDFSTMLKSH----AATAPLKRNTTQEDVGGAAVYLFSELSKGVTGE 244

Query: 255 VISIDGGY 262
           +  +D GY
Sbjct: 245 IHYVDCGY 252

Length = 260

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 27/121 (22%), Positives = 62/121 (51%), Gaps = 10/121 (8%)

Query: 147 NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQIS 206
            ++++ +S +    +IP  +    +K ++    + +A     + +RVNA+S   + T   
Sbjct: 138 GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRT--- 194

Query: 207 PPDLNDLLVQEYVKLIAK----TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY 262
              L    ++++ K++A     TP+ R+    ++    AFLC   ++ I+G+V+ +DGG+
Sbjct: 195 ---LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251

Query: 263 T 263
           +
Sbjct: 252 S 252

Length = 262

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 32/208 (15%)

Query: 21  ALVTGGTRGIGYAIVEELARF----GASVHTCGRDQNMINERIQEWESK--GFKVTGSVC 74
            LVTG +RG G  I +ELA+     G+ +    R+   + +   E  ++  G +V     
Sbjct: 3   CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62

Query: 75  DLSFGDQREKLIETVSSVFDGKLN-----ILVNNAALV--VMKRATEYTLEEYSSVMSTN 127
           DL      E+L++ +      +       +L+NNA  +  V K   + +        ST 
Sbjct: 63  DLGAEAGLEQLLKALRE--LPRPKGLQRLLLINNAGTLGDVSKGFVDLS-------DSTQ 113

Query: 128 VESSYHL-----CQLAHPLLKA-----SGNASIVFMSSVAGAISIPRLSAYAASKGAINQ 177
           V++ + L       L   +LKA       N ++V +SS+         + Y A K A + 
Sbjct: 114 VQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDM 173

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQI 205
           L + LA E    ++RV   +P  ++T +
Sbjct: 174 LFQVLALEEKNPNVRVLNYAPGVLDTDM 201

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 9/152 (5%)

Query: 22  LVTGGTRGIGYAIVEELARFGAS--VHTCGRDQN-MINERIQEWESKGFKVTGSVCDLSF 78
           L+TGG  G+G  +   LA  GA   V    R        R     + G +V+   CD++ 
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
                 L+  +++   G L  +++ A ++      E T   +++V++  V  + +L +L 
Sbjct: 214 PAALAALLAELAA--GGPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGALNLHELT 271

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAA 170
             L         V  SSVA  +     +AYAA
Sbjct: 272 PDL----PLDFFVLFSSVAALLGGAGQAAYAA 299

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 9/201 (4%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            ALV G + GIG A   ELA  G  V    R      E + +  + G +      D++  
Sbjct: 12  PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP 71

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           D  +  +        G++ +LV+ A      +  E + E++ S +  ++  +  L     
Sbjct: 72  DSVKSFVAQAEEAL-GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVL 130

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP- 198
           P +       ++F+ S       P + AY A+K  +  +  NL  E     +R + V P 
Sbjct: 131 PGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPG 190

Query: 199 -------WAVNTQISPPDLND 212
                  W++  ++  P L D
Sbjct: 191 PTLTGMGWSLPAEVIGPMLED 211

Length = 274

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 46/207 (22%), Positives = 78/207 (37%), Gaps = 33/207 (15%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ----EWESKGFKVTGSV 73
           G   ++TG   GIG+      A  GA V    R+ +  +  +     EW     +V    
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKA--RVEAMT 58

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEE--YSSVMSTNVESS 131
            DL+     ++  E   +  +  L++LV NAA+     A  +TL E    +    N    
Sbjct: 59  LDLASLRSVQRFAEAFKAK-NSPLHVLVCNAAVF----ALPWTLTEDGLETTFQVNHLGH 113

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVA----------GAISIPRLS----------AYAAS 171
           ++L QL   +L+ S  A ++ +SS +          G +    LS          AY  +
Sbjct: 114 FYLVQLLEDVLRRSAPARVIVVSSESHRFTDLPDSCGNLDFSLLSPPKKKYWSMLAYNRA 173

Query: 172 KGAINQLTKNLACEWATDSIRVNAVSP 198
           K      +  L    +   I  N++ P
Sbjct: 174 KLCNILFSNELHRRLSPRGITSNSLHP 200

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 51/200 (25%), Positives = 76/200 (38%), Gaps = 19/200 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G TA+VTGG  G+G      LA+ GA V    R  ++  E +   +     V   + D
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLD 79

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           L+  +      E        +++IL+NNA   VM        + + +  +TN    + L 
Sbjct: 80  LADLESVRAFAERFLDSGR-RIDILINNAG--VMACPETRVGDGWEAQFATNHLGHFALV 136

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLS------------AYAASKGAINQLTKNLA 183
            L  P L A   A +V +SS     S  R              AY  SK A      +L 
Sbjct: 137 NLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLD 196

Query: 184 CEWATDSIRVNAVSPWAVNT 203
                  +R  +V P  + T
Sbjct: 197 KLGKDQGVRAFSVHPGGILT 216

Length = 315

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 38/203 (18%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-----MINERIQEWESKGFKVTGSV 73
           + A+VTG +RG+G A+ E+L + G +V    R ++        ER+ E E          
Sbjct: 2   VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVE---------- 51

Query: 74  CDLSFGDQREKLIETV---SSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVE 129
            DLS        +      + V      +L+NNA  V  +           +  +  NV 
Sbjct: 52  LDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNV- 110

Query: 130 SSYHLCQLAHPLLKASGNAS---------IVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
                   A PL+  +  A          I+ +SS A   +    S Y A+K A++   +
Sbjct: 111 --------AAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHAR 162

Query: 181 NLACEWATDSIRVNAVSPWAVNT 203
            +A + A  ++R+ +++P  V+T
Sbjct: 163 AVALD-ANRALRIVSLAPGVVDT 184

Length = 243

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 34/175 (19%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV-CDLSFG 79
            LVTGGT  IG  +V  L + G  V   GR +          ES           DL+  
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRR--------SESLNTGRIRFHEGDLTDP 52

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           D  E+L+       + + + +++ AA   +  + E   +     +  NV  +  L + A 
Sbjct: 53  DALERLLA------EVQPDAVIHLAAQSGVGASFEDPAD----FIRANVLGTLRLLEAAR 102

Query: 140 PLLKASGNASIVFMSSVA--GAISIPR---------LSAYAASKGAINQLTKNLA 183
                +G    VF SS    G ++ P          LS YAA+K A  +L +  A
Sbjct: 103 ----RAGVKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYA 153

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 38/152 (25%)

Query: 23  VTGGTRGIGYAIVEELARFGASVH-TC---GRDQNMINERI-QEWESKG-FK-------- 68
           +TG T  +G  ++E+L R    V   C    +D     ER+ QE    G F         
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 69  --VTGSVCDLSFG---DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV 123
             V G + + + G   +  ++L E V        +++++NAA V         +E YS +
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEV--------DVIIHNAATVNF-------VEPYSDL 105

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSS 155
            +TNV  +  + +LA    K         +S+
Sbjct: 106 RATNVLGTREVLRLA----KQMKKLPFHHVST 133

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 37/173 (21%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ---NMINERIQEWESKGFKVTGS 72
           L G  A+VTG + G+G  +   LA  GA V    R++         I+       K++  
Sbjct: 12  LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRT-AVPDAKLSLR 70

Query: 73  VCDLSFGDQREKLIETVSSVFDGK-LNILVNNAALVVM---KRATEYTLEEYSSVMSTNV 128
             DLS       L E + +  +G+ +++L+NNA   VM   +R T  T + +     TN 
Sbjct: 71  ALDLSSLASVAALGEQLRA--EGRPIHLLINNAG--VMTPPERQT--TADGFELQFGTN- 123

Query: 129 ESSYHLCQLA---H--PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN 176
               HL   A   H  PLL+A G A +   SS+            AA +GAIN
Sbjct: 124 ----HLGHFALTAHLLPLLRA-GRARVTSQSSI------------AARRGAIN 159

Length = 313

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 33/142 (23%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTC-----GRDQNMINERIQE------------ 61
            + L+TG T  +G  ++E+L R    +        G+      ER++E            
Sbjct: 1   KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60

Query: 62  ----WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTL 117
               +ESK   + G + + + G   E L   +  V     NI+++ AA V          
Sbjct: 61  LNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEV-----NIIIHCAATVTFD------- 108

Query: 118 EEYSSVMSTNVESSYHLCQLAH 139
           E     +S NV  +  L +LA 
Sbjct: 109 ERLDEALSINVLGTLRLLELAK 130

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-------DQN---MINERIQEWES 64
            LRG  ALV G TRG G  I  EL   GA+V+  GR       + +    I E  +   +
Sbjct: 5   PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA 64

Query: 65  KGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNN 103
            G +      D    +Q   L+E +     G+L+ILVN+
Sbjct: 65  AGGRGIAVQVDHLVPEQVRALVERIDREQ-GRLDILVND 102

Length = 305

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 13/188 (6%)

Query: 83  EKLIETVSSVFDGKLNILVNNAA--LVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           +++ E+V + F G ++ILV++ A    V K   E + + Y + +S +  S   L Q   P
Sbjct: 108 QEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGP 166

Query: 141 LLKASGNASIVFMSSVAGAISIPRLSAYAAS-KGAINQLTKNLACEWATD-SIRVNAVS- 197
           ++   G +  + ++ +A    IP      +S K A+   T+ LA E      IRVN +S 
Sbjct: 167 IMNPGGAS--ISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISA 224

Query: 198 -PWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI 256
            P       +   ++D++  EY    A  PL +    +E+    AFL  P AS ITG  I
Sbjct: 225 GPLGSRAAKAIGFIDDMI--EYSY--ANAPLQKELTADEVGNAAAFLASPLASAITGATI 280

Query: 257 SIDGGYTA 264
            +D G  A
Sbjct: 281 YVDNGLNA 288

Length = 303

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 18/179 (10%)

Query: 95  GKLNILVNNAALV--VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVF 152
           G ++ILV++ A    + K   E + + Y + +ST+  S   L     P++   G  S + 
Sbjct: 118 GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGG--STIS 175

Query: 153 MSSVAGAISIPRLSA-YAASKGAINQLTKNLACE----WATDSIRVNAVS--PWAVNTQI 205
           ++ +A   ++P      +++K A+   TK LA E    W    IRVN +S  P A     
Sbjct: 176 LTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWG---IRVNTISAGPLASRAG- 231

Query: 206 SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
                 + +V  Y       PL    E  ++    AFL  P AS ITG+ + +D G   
Sbjct: 232 KAIGFIERMVDYYQ---DWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV 287

Length = 299

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 30/201 (14%)

Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFG 79
           L+TG + G+G  +  E A  G  +  C R  + + E   E  ++  G KV  +  D++  
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 80  DQREKLIETVSSVFD------GKLNILVNNAALVVMKR-------ATEYTLEEYSSVMST 126
           DQ       V  VF       G L+ ++ NA +    R       A + T E       T
Sbjct: 66  DQ-------VFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAE-------T 111

Query: 127 NVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR-LSAYAASKGAINQLTKNLACE 185
           N  ++   C+ A  + +  G+  +V +SSV+    +P   +AYAASK  +  L + L  E
Sbjct: 112 NFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAE 171

Query: 186 WATDSIRVNAVSPWAVNTQIS 206
            A   I+V+ + P  + ++++
Sbjct: 172 LAKTPIKVSTIEPGYIRSEMN 192

Length = 248

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 17/197 (8%)

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSVMSTNVE 129
           CD++     + + ET+   + GKL+ +V+         +  R  + + + ++  M  +V 
Sbjct: 67  CDVTDEASIDAVFETLEKKW-GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVY 125

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S   + Q A  L+   G  SI+ ++       +P  +    +K A+    K LA +    
Sbjct: 126 SFTAVAQRAEKLMTDGG--SILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPK 183

Query: 190 SIRVNAVSPWAVNTQISPPDLND----LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
           +IRVNA+S   + T ++   + D    L   EY       PL R+    E+     +L  
Sbjct: 184 NIRVNAISAGPIKT-LAASGIGDFRYILKWNEY-----NAPLRRTVTIEEVGDSALYLLS 237

Query: 246 PAASYITGQVISIDGGY 262
             +  +TG+V  +D GY
Sbjct: 238 DLSRGVTGEVHHVDSGY 254

Length = 272

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 8/133 (6%)

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L + A P+L  S +AS++ +S +     +P  +    +K ++    + LA       IR 
Sbjct: 127 LAKAALPML--SDDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRA 184

Query: 194 NAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           N +S   + T  +    D   +L  ++V+  A  PL R+    E+  + AFL    AS +
Sbjct: 185 NGISAGPIKTLAASGIKDFGKIL--DFVESNA--PLRRNVTIEEVGNVAAFLLSDLASGV 240

Query: 252 TGQVISIDGGYTA 264
           TG++  +D G+ A
Sbjct: 241 TGEITHVDSGFNA 253

Length = 260

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 27/178 (15%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           T L+ G +RGIG   V +    G  V    RD   +   +Q   ++   +     D++  
Sbjct: 3   TVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL-AALQALGAEALAL-----DVADP 56

Query: 80  DQREKLIETVSSVFDG-KLNILVNNAALVVMKRATE----YTLEEYSSVMSTNVESSYHL 134
                 +  ++   DG  L+  V  A   V    TE     T E++ +VM TNV     L
Sbjct: 57  AS----VAGLAWKLDGEALDAAVYVAG--VYGPRTEGVEPITREDFDAVMHTNVLGPMQL 110

Query: 135 CQLAHPLLKASGNASIVF---MSSVAGAISIPRLSA---YAASKGAINQLTKNLACEW 186
             +  PL++A+G    V    M S+  A      +    Y ASK A+N   +  + + 
Sbjct: 111 LPILLPLVEAAGGVLAVLSSRMGSIGDATG----TTGWLYRASKAALNDALRAASLQA 164

Length = 222

>gnl|CDD|187655 cd08952, KR_1_SDR_x, ketoreductase (KR), subgroup 1, complex (x) SDRs

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 17/174 (9%)

Query: 4   AAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGAS--VHTCGR--DQNMINERI 59
           A  P    + W  RG T LVTGGT  +G  +   LAR GA   V T  R  D     E +
Sbjct: 217 APAPAPAARPWRPRG-TVLVTGGTGALGAHVARWLARRGAEHLVLTSRRGPDAPGAAELV 275

Query: 60  QEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK-LNILVNNAALVVMKRATEYTLE 118
            E  + G +VT + CD++    R+ L   ++++  G  L  +V+ A ++      + T E
Sbjct: 276 AELTALGARVTVAACDVA---DRDALAALLAALPAGHPLTAVVHAAGVLDDGPLDDLTPE 332

Query: 119 EYSSVMSTNVESSYHLCQL--AHPLLKASGNASIVFMSSVAGAISIPRLSAYAA 170
             + V+   V  + HL +L     L       + V  SS+AG        AYAA
Sbjct: 333 RLAEVLRAKVAGARHLDELTRDRDL------DAFVLFSSIAGVWGSGGQGAYAA 380

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes KR domains found in many multidomain PKSs, including six of seven Sorangium cellulosum PKSs (encoded by spiDEFGHIJ) which participate in the synthesis of the polyketide scaffold of the cytotoxic spiroketal polyketide spirangien. These seven PKSs have either a single PKS module (SpiF), two PKR modules (SpiD,-E,-I,-J), or three PKS modules (SpiG,-H). This subfamily includes the single KR domain of SpiF, the first KR domains of SpiE,-G,H,-I,and #J, the third KR domain of SpiG, and the second KR domain of SpiH. The second KR domains of SpiE,-G, I, and #J, and the KR domains of SpiD, belong to a different KR_FAS_SDR subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 480

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 21/159 (13%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC----D 75
           T ++TG + G+G    + LA+ G  V    R+     ++ +    +      S      D
Sbjct: 8   TVIITGASSGVGLYAAKALAKRGWHVIMACRN----LKKAEAAAQELGIPPDSYTIIHID 63

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATE--YTLEEYSSVMSTNVESSYH 133
           L   D   + ++   +     L+ LV NAA V M    E   + + Y   M+TN    + 
Sbjct: 64  LGDLDSVRRFVDDFRA-LGKPLDALVCNAA-VYMPLLKEPLRSPQGYELSMATNHLGHFL 121

Query: 134 LCQLAHPLLKASGNAS--IVFMSSV-------AGAISIP 163
           LC L    LK S      +V + +V        G I IP
Sbjct: 122 LCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP 160

Length = 322

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 15/95 (15%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKV-----TG 71
           G T LVTGG   IG  +V ++ +FG   +    RD+N ++E ++E  S+          G
Sbjct: 2   GKTILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFIIG 61

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAAL 106
            V D      +E+L     +  +   +I+ + AAL
Sbjct: 62  DVRD------KERLRR---AFKERGPDIVFHAAAL 87

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	266
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08643	256	acetoin reductase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK09291	257	short chain dehydrogenase; Provisional	100.0
PRK08264	238	short chain dehydrogenase; Validated	100.0
PRK08017	256	oxidoreductase; Provisional	100.0
PRK08177	225	short chain dehydrogenase; Provisional	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.98
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.95
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.94
PLN03209	576	translocon at the inner envelope of chloroplast su	99.93
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.91
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.9
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.9
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.9
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.9
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.89
PRK06720	169	hypothetical protein; Provisional	99.88
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PLN02653	340	GDP-mannose 4,6-dehydratase	99.85
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.85
PLN02650	351	dihydroflavonol-4-reductase	99.85
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.85
PLN02583	297	cinnamoyl-CoA reductase	99.84
PLN02214	342	cinnamoyl-CoA reductase	99.84
PLN02572	442	UDP-sulfoquinovose synthase	99.84
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.83
PLN00198	338	anthocyanidin reductase; Provisional	99.83
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.82
PLN02240	352	UDP-glucose 4-epimerase	99.81
PLN02686	367	cinnamoyl-CoA reductase	99.8
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.8
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.79
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.79
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.78
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.78
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.78
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.76
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.75
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.74
PLN02427	386	UDP-apiose/xylose synthase	99.73
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.72
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.71
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.71
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.7
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.69
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.68
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.68
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.67
PLN02260	668	probable rhamnose biosynthetic enzyme	99.65
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.64
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.64
CHL00194	317	ycf39 Ycf39; Provisional	99.62
PLN02206	442	UDP-glucuronate decarboxylase	99.62
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.62
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.61
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.58
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.57
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.57
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.56
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.54
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.54
PRK07201	657	short chain dehydrogenase; Provisional	99.52
PRK05865	854	hypothetical protein; Provisional	99.5
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.46
PLN02996	491	fatty acyl-CoA reductase	99.46
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.45
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.41
PRK08309	177	short chain dehydrogenase; Provisional	99.38
PLN02778	298	3,5-epimerase/4-reductase	99.38
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.35
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.34
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.33
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.3
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.29
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.29
PLN00016	378	RNA-binding protein; Provisional	99.24
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.22
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.21
PRK12320	699	hypothetical protein; Provisional	99.2
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.19
PLN02503	605	fatty acyl-CoA reductase 2	99.14
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.13
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.11
PLN02260	668	probable rhamnose biosynthetic enzyme	99.05
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.95
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.95
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.94
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.89
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.86
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.84
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.79
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.75
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.72
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.58
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.54
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.5
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.46
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.45
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.44
COG2910	211	Putative NADH-flavin reductase [General function p	98.38
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.36
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.3
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.24
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.17
PLN00106	323	malate dehydrogenase	98.09
PRK09620	229	hypothetical protein; Provisional	98.03
PRK14982	340	acyl-ACP reductase; Provisional	98.03
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.01
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.98
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.97
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.96
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.96
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.89
PTZ00325	321	malate dehydrogenase; Provisional	97.85
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.83
KOG2774	366	consensus NAD dependent epimerase [General functio	97.81
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.76
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.73
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.71
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.62
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.58
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.58
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.54
COG3268	382	Uncharacterized conserved protein [Function unknow	97.52
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.52
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.49
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.49
PRK14968	188	putative methyltransferase; Provisional	97.49
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.45
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.44
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.44
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.36
PRK06849	389	hypothetical protein; Provisional	97.34
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.31
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.26
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.24
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.21
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.16
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.13
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	97.12
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.12
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.1
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.08
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.07
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.07
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.06
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.05
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.04
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.04
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.03
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.02
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.01
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.99
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.98
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.98
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.97
PRK05086	312	malate dehydrogenase; Provisional	96.97
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.94
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.94
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.93
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.91
PRK04148	134	hypothetical protein; Provisional	96.88
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.86
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.85
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	96.8
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.76
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.76
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.75
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.7
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.7
PLN00203	519	glutamyl-tRNA reductase	96.66
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.66
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.65
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.63
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.6
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.57
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.55
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.55
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.48
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.47
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.46
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.45
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.43
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.43
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.41
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.39
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.38
PRK09496	453	trkA potassium transporter peripheral membrane com	96.38
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	96.36
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.3
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.3
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.3
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.29
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.28
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.19
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.18
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	96.18
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.15
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.11
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.1
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.1
PLN02602	350	lactate dehydrogenase	96.09
PRK14967	223	putative methyltransferase; Provisional	96.08
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.06
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.06
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.05
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.03
PRK09496	453	trkA potassium transporter peripheral membrane com	96.03
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.02
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.02
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.01
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.0
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.99
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.94
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.93
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.91
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.9
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.85
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.84
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.81
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.8
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.8
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.78
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.77
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.75
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.75
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.74
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.73
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	95.73
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.72
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.72
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.72
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.7
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.69
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.69
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.65
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.64
PRK15128	396	23S rRNA m(5)C1962 methyltransferase; Provisional	95.64
PLN02740	381	Alcohol dehydrogenase-like	95.63
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.6
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.6
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.57
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.56
PRK08223	287	hypothetical protein; Validated	95.56
PTZ00117	319	malate dehydrogenase; Provisional	95.56
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.53
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.53
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.53
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.51
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.49
PTZ00354	334	alcohol dehydrogenase; Provisional	95.48
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.47
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.47
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.43
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	95.43
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.41
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.4
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.38
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.35
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.35
PRK12480	330	D-lactate dehydrogenase; Provisional	95.34
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.34
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.33
PRK08655	437	prephenate dehydrogenase; Provisional	95.29
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.23
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.22
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.21
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.19
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.18
PF05175	170	MTS: Methyltransferase small domain; InterPro: IPR	95.18
PF13649	101	Methyltransf_25: Methyltransferase domain; PDB: 3B	95.16
PRK11207	197	tellurite resistance protein TehB; Provisional	95.14
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.13
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.12
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.11
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.11
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.1
KOG3191	209	consensus Predicted N6-DNA-methyltransferase [Tran	95.07
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.06
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	95.06
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.03
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	94.96
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.96
PRK07877	722	hypothetical protein; Provisional	94.95
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	94.94
PLN02827	378	Alcohol dehydrogenase-like	94.93
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.91
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.91
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	94.91
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.88
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.87

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.3e-52  Score=323.19  Aligned_cols=245  Identities=30%  Similarity=0.401  Sum_probs=224.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ..++.|+++||||++|||++++..|+++|++|+..+++....++++..|...+ ....+.||++++.+++..+++..+.+
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhc
Confidence            34678999999999999999999999999999999999999999998886654 44567999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHH--hcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLK--ASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~--~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                       +++++||||||+.....+.....++|++.+.+|+.|.|+++|++.+.|-  +++.++||||||+.+..+.-+...|+++
T Consensus        89 -g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAs  167 (256)
T KOG1200|consen   89 -GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAAS  167 (256)
T ss_pred             -CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhh
Confidence             7999999999999988899999999999999999999999999999854  3445699999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+++.+|+|++++|+++++||||.|+||||.|||+....+.    -..++...+|++|++++||+|+.++||+||.++|+
T Consensus       168 K~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~----v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYi  243 (256)
T KOG1200|consen  168 KGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPK----VLDKILGMIPMGRLGEAEEVANLVLFLASDASSYI  243 (256)
T ss_pred             cCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHH----HHHHHHccCCccccCCHHHHHHHHHHHhccccccc
Confidence            99999999999999999999999999999999998875432    22567778999999999999999999999999999


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      ||+.+.|+||..+
T Consensus       244 TG~t~evtGGl~m  256 (256)
T KOG1200|consen  244 TGTTLEVTGGLAM  256 (256)
T ss_pred             cceeEEEeccccC
Confidence            9999999999754

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-51  Score=345.26  Aligned_cols=251  Identities=25%  Similarity=0.363  Sum_probs=223.0

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +++++||+++||||++|||+++|++|+++|++|++++|+.+.++++.+++.+. +.++.++++|++|+++++++++++. 
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-   81 (263)
T PRK08339          3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-   81 (263)
T ss_pred             ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-
Confidence            34588999999999999999999999999999999999999998888887654 5578899999999999999999986 


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ +++|++|||+|.....++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.+.+..|+++
T Consensus        82 ~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~as  160 (263)
T PRK08339         82 NI-GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVV  160 (263)
T ss_pred             hh-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHH
Confidence            46 78999999999877778888999999999999999999999999999998878999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-------hhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-------LLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      |+|+++|+|+++.|++++|||||+|+||+++|++.......       .............|++|+.+|+|+|++++||+
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~  240 (263)
T PRK08339        161 RISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLA  240 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999975421100       01122233455679999999999999999999


Q ss_pred             cCCCCCccccEEEeCCCccCC
Q 024551          245 LPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ++.++++||+++.+|||+..+
T Consensus       241 s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        241 SDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             cchhcCccCceEEECCCcccc
Confidence            999999999999999999764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-49  Score=333.89  Aligned_cols=246  Identities=26%  Similarity=0.420  Sum_probs=218.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||+++||||++|||++++++|+++|++|++++|+..  ++..+++...+.++.++++|++|+++++++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999988653  34455565566789999999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|++|||||+...+++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.+....|++||
T Consensus        82 -g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  160 (251)
T PRK12481         82 -GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK  160 (251)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence             7899999999988777888899999999999999999999999999998765 58999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +|+++|+|+++.|++++|||||+|+||+++|++.......  ...........|.+|+.+|||+|++++||+++.+.++|
T Consensus       161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~  238 (251)
T PRK12481        161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRAD--TARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVT  238 (251)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccC--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcC
Confidence            9999999999999999999999999999999986643221  11223445678999999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.|.+|||++.
T Consensus       239 G~~i~vdgg~~~  250 (251)
T PRK12481        239 GYTLAVDGGWLA  250 (251)
T ss_pred             CceEEECCCEec
Confidence            999999999753

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-49  Score=336.99  Aligned_cols=243  Identities=21%  Similarity=0.280  Sum_probs=207.8

Q ss_pred             CCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++||++|||||++  |||+++|++|+++|++|++++|+....+...+...+.+ ...++++|++|+++++++++++.+.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            6899999999996  99999999999999999999998654333322222323 23578999999999999999999998


Q ss_pred             CCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           94 DGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                       +++|+||||||+...    .++.+.+.++|++.+++|+.++++++++++|+|++  .|+||+++|.++..+.|.+..|+
T Consensus        84 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  160 (271)
T PRK06505         84 -GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMG  160 (271)
T ss_pred             -CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhh
Confidence             799999999997643    46778899999999999999999999999999974  48999999999988899999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+|+.+|+|+++.|++++|||||+|+||+++|++.....+..  ..........|++|+.+|||+|++++||+++.++
T Consensus       161 asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~  238 (271)
T PRK06505        161 VAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDAR--AIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSS  238 (271)
T ss_pred             hhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchH--HHHHHHhhcCCccccCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999754321111  1112233457899999999999999999999999


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      ++||+.|.+|||+++
T Consensus       239 ~itG~~i~vdgG~~~  253 (271)
T PRK06505        239 GVTGEIHFVDSGYNI  253 (271)
T ss_pred             ccCceEEeecCCccc
Confidence            999999999999875

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-49  Score=333.62  Aligned_cols=241  Identities=22%  Similarity=0.273  Sum_probs=211.1

Q ss_pred             CCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.  +.+++++++|++|+++++++++++.+.+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            689999999999  8999999999999999999999984 4444444443  2468889999999999999999999998


Q ss_pred             CCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           94 DGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                       +++|++|||||...+    +++.+.+.++|++.+++|+.+++++++.++|+|++  .|+||+++|.++..+.+.+..|+
T Consensus        82 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~  158 (252)
T PRK06079         82 -GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMG  158 (252)
T ss_pred             -CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhH
Confidence             799999999998643    57788899999999999999999999999999964  48999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+|+++|+|+++.|++++|||||+|+||+++|++........  ..........|++|+.+|||+|++++||+++.++
T Consensus       159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~  236 (252)
T PRK06079        159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHK--DLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLST  236 (252)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChH--HHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999865432211  1123344567899999999999999999999999


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      ++||+++.+|||+++
T Consensus       237 ~itG~~i~vdgg~~~  251 (252)
T PRK06079        237 GVTGDIIYVDKGVHL  251 (252)
T ss_pred             cccccEEEeCCceec
Confidence            999999999999875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.6e-49  Score=333.96  Aligned_cols=252  Identities=21%  Similarity=0.278  Sum_probs=215.0

Q ss_pred             cCCccccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      +|.+.++++||+++||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.+....+.+++||++|++++++++
T Consensus         1 ~~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   79 (258)
T PRK07533          1 PMQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVF   79 (258)
T ss_pred             CCCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHH
Confidence            3667788999999999998  59999999999999999999999864422 22222222124568899999999999999


Q ss_pred             HHHHhhcCCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC
Q 024551           87 ETVSSVFDGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI  162 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~  162 (266)
                      +++.+.+ +++|++|||||....    +++.+.+.++|++++++|+.+++++++.++|+|++  .|+||++||..+..+.
T Consensus        80 ~~~~~~~-g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~  156 (258)
T PRK07533         80 ARIAEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVV  156 (258)
T ss_pred             HHHHHHc-CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCC
Confidence            9999998 789999999997642    46778899999999999999999999999999964  4899999999988888


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHH
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      +.+..|++||+|+.+|+|+++.|++++|||||+|+||+++|++........  ..........|++|..+|+|+++.++|
T Consensus       157 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~p~dva~~~~~  234 (258)
T PRK07533        157 ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFD--ALLEDAAERAPLRRLVDIDDVGAVAAF  234 (258)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcH--HHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999865432111  112334456799999999999999999


Q ss_pred             HhcCCCCCccccEEEeCCCccCCC
Q 024551          243 LCLPAASYITGQVISIDGGYTAGN  266 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~~~~  266 (266)
                      |++++.+++||+.+.+|||+++.+
T Consensus       235 L~s~~~~~itG~~i~vdgg~~~~~  258 (258)
T PRK07533        235 LASDAARRLTGNTLYIDGGYHIVG  258 (258)
T ss_pred             HhChhhccccCcEEeeCCcccccC
Confidence            999999999999999999998764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=2e-49  Score=334.68  Aligned_cols=248  Identities=29%  Similarity=0.368  Sum_probs=214.2

Q ss_pred             ccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChh--HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQN--MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        14 ~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++++||+++||||+  +|||+++|++|+++|++|+++.|+.+  +.++..+++.+.+..+.++++|++|+++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            45789999999986  89999999999999999998876543  445556666555556778999999999999999999


Q ss_pred             HhhcCCcccEEEecccccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc
Q 024551           90 SSVFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL  165 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~  165 (266)
                      .+.+ +++|++|||||+..    ..++.+.+.++|++.+++|+.+++++++.++|.|++  .|+||++||..+..+.|.+
T Consensus        82 ~~~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~  158 (258)
T PRK07370         82 KQKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNY  158 (258)
T ss_pred             HHHc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCccc
Confidence            9998 78999999999764    256788899999999999999999999999999975  4899999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ..|++||+|+.+|+++++.|++++|||||+|+||+++|++.......  ...........|++|+.+|+|++++++||++
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s  236 (258)
T PRK07370        159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI--LDMIHHVEEKAPLRRTVTQTEVGNTAAFLLS  236 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc--hhhhhhhhhcCCcCcCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999976432111  1112333446789999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccCCC
Q 024551          246 PAASYITGQVISIDGGYTAGN  266 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~~~  266 (266)
                      +.++++||+++.+|||+++.+
T Consensus       237 ~~~~~~tG~~i~vdgg~~~~~  257 (258)
T PRK07370        237 DLASGITGQTIYVDAGYCIMG  257 (258)
T ss_pred             hhhccccCcEEEECCcccccC
Confidence            999999999999999998754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-49  Score=337.81  Aligned_cols=245  Identities=22%  Similarity=0.279  Sum_probs=207.7

Q ss_pred             ccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHH-hcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE-SKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        14 ~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      |.++||+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++. +.+.. .++++|++|+++++++++++.
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence            35689999999997  89999999999999999999999853 222333332 22334 678999999999999999999


Q ss_pred             hhcCCcccEEEecccccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCch
Q 024551           91 SVFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  166 (266)
                      +.+ +++|+||||||+..    .+++.+.+.++|++++++|+.+++++++.++|+|.+  .|+||++||.++..+.|.+.
T Consensus        79 ~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~  155 (274)
T PRK08415         79 KDL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYN  155 (274)
T ss_pred             HHc-CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcch
Confidence            998 79999999999864    256788899999999999999999999999999975  37999999999998899999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .|++||+|+.+|+|+++.|++++|||||+|+||+++|++.....+..  ..........|++|+.+|||+|++++||+++
T Consensus       156 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~pl~r~~~pedva~~v~fL~s~  233 (274)
T PRK08415        156 VMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFR--MILKWNEINAPLKKNVSIEEVGNSGMYLLSD  233 (274)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhh--HHhhhhhhhCchhccCCHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999998654321111  1011122356899999999999999999999


Q ss_pred             CCCCccccEEEeCCCccCC
Q 024551          247 AASYITGQVISIDGGYTAG  265 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~~  265 (266)
                      .++++||+.|.+|||+.+.
T Consensus       234 ~~~~itG~~i~vdGG~~~~  252 (274)
T PRK08415        234 LSSGVTGEIHYVDAGYNIM  252 (274)
T ss_pred             hhhcccccEEEEcCccccc
Confidence            9999999999999998753

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-49  Score=331.76  Aligned_cols=245  Identities=33%  Similarity=0.495  Sum_probs=219.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.+.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999999999999888777788999999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCC-C-Cchhhhh
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISI-P-RLSAYAA  170 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~-~-~~~~y~~  170 (266)
                       +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+.... + ....|++
T Consensus        85 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~a  163 (253)
T PRK05867         85 -GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCA  163 (253)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHH
Confidence             7899999999988777888889999999999999999999999999997764 5799999998876533 3 4579999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||+|+++|+|+++.|++++|||||+|+||+++|++.....  ...   .......|++|+.+|+|+|++++||+++.+++
T Consensus       164 sKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~--~~~---~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~  238 (253)
T PRK05867        164 SKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT--EYQ---PLWEPKIPLGRLGRPEELAGLYLYLASEASSY  238 (253)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch--HHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCcccCC
Confidence            9999999999999999999999999999999999865431  111   22344678999999999999999999999999


Q ss_pred             ccccEEEeCCCccC
Q 024551          251 ITGQVISIDGGYTA  264 (266)
Q Consensus       251 ~~G~~l~vdgG~~~  264 (266)
                      +||+.|.+|||+++
T Consensus       239 ~tG~~i~vdgG~~~  252 (253)
T PRK05867        239 MTGSDIVIDGGYTC  252 (253)
T ss_pred             cCCCeEEECCCccC
Confidence            99999999999875

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-49  Score=332.93  Aligned_cols=250  Identities=28%  Similarity=0.419  Sum_probs=223.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh--cCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES--KGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++..  .+.++.++++|++|+++++++++++.+.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999988876  4567889999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||||....++..+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||
T Consensus        84 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (260)
T PRK07063         84 F-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAK  162 (260)
T ss_pred             h-CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHH
Confidence            8 789999999998766667778999999999999999999999999999887779999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      +|+++|+++++.|++++|||||+|+||+++|++.......  .............|++|+.+|+|+|++++||+++.+.|
T Consensus       163 aa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~  242 (260)
T PRK07063        163 HGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPF  242 (260)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccc
Confidence            9999999999999999999999999999999986532211  11111223445679999999999999999999999999


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      +||+.|.+|||+++.
T Consensus       243 itG~~i~vdgg~~~~  257 (260)
T PRK07063        243 INATCITIDGGRSVL  257 (260)
T ss_pred             cCCcEEEECCCeeee
Confidence            999999999998753

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.4e-49  Score=332.40  Aligned_cols=245  Identities=21%  Similarity=0.288  Sum_probs=209.8

Q ss_pred             cCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++||+++||||++  |||+++|++|+++|++|++.+|+. ..++..+++.+..+...++++|++|+++++++++++.+.
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999997  999999999999999999998874 344445555433122346789999999999999999999


Q ss_pred             cCCcccEEEecccccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           93 FDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      + +++|+||||+|...    ..++.+.+.++|++.+++|+.+++++++.+.|+|++  .|+||+++|..+..+.+.+..|
T Consensus        84 ~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y  160 (260)
T PRK06603         84 W-GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVM  160 (260)
T ss_pred             c-CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccch
Confidence            8 78999999999754    246778899999999999999999999999999964  4899999999998888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+|+++|+|+++.|++++|||||+|+||+++|++.......  ...........|++|+.+|+|+|++++||+++.+
T Consensus       161 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~  238 (260)
T PRK06603        161 GVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDF--STMLKSHAATAPLKRNTTQEDVGGAAVYLFSELS  238 (260)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCc--HHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999975432111  1112334456799999999999999999999999


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      +|+||+.|.+|||+++.
T Consensus       239 ~~itG~~i~vdgG~~~~  255 (260)
T PRK06603        239 KGVTGEIHYVDCGYNIM  255 (260)
T ss_pred             ccCcceEEEeCCccccc
Confidence            99999999999999875

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.3e-49  Score=331.43  Aligned_cols=244  Identities=22%  Similarity=0.298  Sum_probs=208.8

Q ss_pred             CCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGG--TRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGa--s~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++||+++||||  ++|||+++|++|+++|++|++++|+. +.++..+++.+..+....++||++|+++++++++++.+.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            78999999997  67999999999999999999988763 3444455554433345678999999999999999999998


Q ss_pred             CCcccEEEecccccccc----C-CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           94 DGKLNILVNNAALVVMK----R-ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                       +++|++|||||+....    + +++.+.++|++.+++|+.+++++++.++|.|+++ .|+||++||.++..+.|++..|
T Consensus        83 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y  160 (261)
T PRK08690         83 -DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVM  160 (261)
T ss_pred             -CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccc
Confidence             7899999999986432    2 3567889999999999999999999999999765 4899999999998889999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +++|+|+.+|+|+++.|++++|||||+|+||+++|++........  ..........|++|+.+|||+|++++||+++.+
T Consensus       161 ~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~  238 (261)
T PRK08690        161 GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFG--KLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLS  238 (261)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchH--HHHHHHhhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999999765332111  111233456799999999999999999999999


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      .++||++|.+|||+.+
T Consensus       239 ~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        239 SGITGEITYVDGGYSI  254 (261)
T ss_pred             CCcceeEEEEcCCccc
Confidence            9999999999999875

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-48  Score=327.11  Aligned_cols=249  Identities=29%  Similarity=0.415  Sum_probs=221.3

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh-HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +.+++++|+++||||++|||+++|++|+++|++|++++|+.+ .++++.+++...+.++.++++|++|+++++++++++.
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999754 4677777787767788899999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC--chhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR--LSAY  168 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~--~~~y  168 (266)
                      +.+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.+.  ...|
T Consensus        82 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  160 (254)
T PRK06114         82 AEL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHY  160 (254)
T ss_pred             HHc-CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchH
Confidence            998 7899999999988777788889999999999999999999999999998887899999999988876654  6899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +++|+|+++++++++.|+.++|||||+|+||+++|++.... ..  ...........|++|..+|||++++++||+++.+
T Consensus       161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~--~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~  237 (254)
T PRK06114        161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EM--VHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAA  237 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cc--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999986531 11  1112344567899999999999999999999999


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      +|+||++|.+|||+++
T Consensus       238 ~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        238 SFCTGVDLLVDGGFVC  253 (254)
T ss_pred             cCcCCceEEECcCEec
Confidence            9999999999999864

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.9e-48  Score=328.27  Aligned_cols=254  Identities=43%  Similarity=0.551  Sum_probs=221.3

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      +.+.++||+++|||+++|||+++|++|++.|++|++++|+++.+++.++++...+   .++..+.||++++++++++++.
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999999999999887654   4699999999999999999999


Q ss_pred             HHhhcCCcccEEEecccccccc-CCCCCCHHHHHHHhccchh-hHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc-
Q 024551           89 VSSVFDGKLNILVNNAALVVMK-RATEYTLEEYSSVMSTNVE-SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL-  165 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~-  165 (266)
                      ..+.+.|++|++|||||..... ++.+.+.++|++.+++|+. +.+++.+.+.|.+++++.|.|+++||..+..+.+.. 
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~  161 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG  161 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence            9999448999999999987654 7999999999999999999 577777888888888788999999999998876666 


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHH---HHhcCCCCCCCCccchHHHHHH
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK---LIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      ..|+++|+|+++|+|++|.|++++|||||+|+||++.|++...........+..+   .....|++|.+.|+|+++.+.|
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~f  241 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAF  241 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHh
Confidence            7999999999999999999999999999999999999998222222111111111   2345689999999999999999


Q ss_pred             HhcCCCCCccccEEEeCCCccCC
Q 024551          243 LCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |+++.++|+||+.|.+|||+++.
T Consensus       242 la~~~asyitG~~i~vdgG~~~~  264 (270)
T KOG0725|consen  242 LASDDASYITGQTIIVDGGFTVV  264 (270)
T ss_pred             hcCcccccccCCEEEEeCCEEee
Confidence            99998889999999999999864

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-48  Score=324.87  Aligned_cols=250  Identities=25%  Similarity=0.438  Sum_probs=227.0

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            46689999999999999999999999999999999999999999888888776778889999999999999999999998


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.++...|+++|
T Consensus        84 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         84 I-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence            8 789999999998777788889999999999999999999999999999877779999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++++++++.|++++||+||+|+||+++|++...........  .......|++|+.+|||++++++||+++.++++|
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~  240 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFT--AWLCKRTPAARWGDPQELIGAAVFLSSKASDFVN  240 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHH--HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCc
Confidence            99999999999999999999999999999999876543322211  3344567999999999999999999999999999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      |+.+.+|||++.+
T Consensus       241 G~~i~~dgg~~~~  253 (254)
T PRK08085        241 GHLLFVDGGMLVA  253 (254)
T ss_pred             CCEEEECCCeeec
Confidence            9999999998764

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-48  Score=325.08  Aligned_cols=249  Identities=31%  Similarity=0.433  Sum_probs=222.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999999999988888777789999999999999999999999998


Q ss_pred             CCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhhhhh
Q 024551           94 DGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAAS  171 (266)
Q Consensus        94 ~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y~~s  171 (266)
                       +++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+. .+.+.+..|++|
T Consensus        82 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s  160 (254)
T PRK07478         82 -GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAAS  160 (254)
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHH
Confidence             78999999999864 457778899999999999999999999999999988878999999998876 577889999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+++++|+++++.|+.++||+|++|+||+++|++.+.........  .......|.++..+|+|+|+.++||+++...++
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  238 (254)
T PRK07478        161 KAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEAL--AFVAGLHALKRMAQPEEIAQAALFLASDAASFV  238 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHH--HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCC
Confidence            999999999999999999999999999999999866432221111  223445688899999999999999999999999


Q ss_pred             cccEEEeCCCccCC
Q 024551          252 TGQVISIDGGYTAG  265 (266)
Q Consensus       252 ~G~~l~vdgG~~~~  265 (266)
                      ||+.|.+|||+++-
T Consensus       239 ~G~~~~~dgg~~~~  252 (254)
T PRK07478        239 TGTALLVDGGVSIT  252 (254)
T ss_pred             CCCeEEeCCchhcc
Confidence            99999999998763

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-48  Score=326.78  Aligned_cols=251  Identities=29%  Similarity=0.410  Sum_probs=223.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .+++||+++||||++|||++++++|+++|++|++++|+++++++..+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999988888887654  34788999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ +++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.+....|+++
T Consensus        84 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~as  162 (265)
T PRK07062         84 RF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAA  162 (265)
T ss_pred             hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHH
Confidence            98 78999999999877778888999999999999999999999999999998878999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-----hhHHHHHH---HHhcCCCCCCCCccchHHHHHHH
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-----LLVQEYVK---LIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      |+++.+|+++++.|+.++||+||+|+||+++|++....+..     ....++..   .....|++|+.+|+|+|++++||
T Consensus       163 Kaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L  242 (265)
T PRK07062        163 RAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFL  242 (265)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999986542210     01111111   12457899999999999999999


Q ss_pred             hcCCCCCccccEEEeCCCccCC
Q 024551          244 CLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +++.+.++||+.+.+|||+..+
T Consensus       243 ~s~~~~~~tG~~i~vdgg~~~~  264 (265)
T PRK07062        243 ASPLSSYTTGSHIDVSGGFARH  264 (265)
T ss_pred             hCchhcccccceEEEcCceEee
Confidence            9999999999999999998764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.9e-48  Score=324.81  Aligned_cols=243  Identities=20%  Similarity=0.336  Sum_probs=208.3

Q ss_pred             CCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++||+++||||++  |||+++|++|+++|++|++++|+ +++++..+++......+.++++|++|+++++++++++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6899999999986  99999999999999999999987 44555666665544556788999999999999999999988


Q ss_pred             CCcccEEEeccccccccC-----CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           94 DGKLNILVNNAALVVMKR-----ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                       +++|++|||||+....+     +.+.+.++|++.+++|+.+++++++.+.|.|++  .|+||++||.++..+.+.+..|
T Consensus        83 -g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y  159 (262)
T PRK07984         83 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM  159 (262)
T ss_pred             -CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchh
Confidence             78999999999764322     556789999999999999999999999987643  4899999999988888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+|+++|+|+++.|++++|||||+|+||+++|++.... +. ............|++|+.+|+|++++++||+++.+
T Consensus       160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~-~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~  237 (262)
T PRK07984        160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KD-FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLS  237 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC-Cc-hHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999864322 11 11112233456789999999999999999999999


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      ++++|+.|.+|||+++
T Consensus       238 ~~itG~~i~vdgg~~~  253 (262)
T PRK07984        238 AGISGEVVHVDGGFSI  253 (262)
T ss_pred             ccccCcEEEECCCccc
Confidence            9999999999999764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.7e-48  Score=324.49  Aligned_cols=245  Identities=22%  Similarity=0.264  Sum_probs=211.2

Q ss_pred             ccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCCh---hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQ---NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        14 ~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++.  +.++.++++|++|++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence            45789999999997  8999999999999999999987753   44555554442  45788999999999999999999


Q ss_pred             HHhhcCCcccEEEecccccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC
Q 024551           89 VSSVFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR  164 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~  164 (266)
                      +.+.+ +++|++|||||+..    ..++.+.+.++|++.+++|+.+++++++.++|+|++  .|+||++||..+..+.+.
T Consensus        81 ~~~~~-g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~  157 (257)
T PRK08594         81 IKEEV-GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQN  157 (257)
T ss_pred             HHHhC-CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCC
Confidence            99998 89999999999764    246678899999999999999999999999999965  489999999999999899


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      +..|++||+|+++|+|+++.|++++|||||+|+||+++|++.......  ...........|++|..+|+|++++++||+
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~~va~~~~~l~  235 (257)
T PRK08594        158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF--NSILKEIEERAPLRRTTTQEEVGDTAAFLF  235 (257)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc--cHHHHHHhhcCCccccCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999999999864322111  111223445678899999999999999999


Q ss_pred             cCCCCCccccEEEeCCCccCC
Q 024551          245 LPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ++.++++||+.+.+|||+++-
T Consensus       236 s~~~~~~tG~~~~~dgg~~~~  256 (257)
T PRK08594        236 SDLSRGVTGENIHVDSGYHII  256 (257)
T ss_pred             CcccccccceEEEECCchhcc
Confidence            999999999999999998764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-47  Score=326.51  Aligned_cols=245  Identities=20%  Similarity=0.279  Sum_probs=206.6

Q ss_pred             ccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      -.++||+++||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.+.-+...++++|++|+++++++++++.+
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH
Confidence            34689999999997  89999999999999999999988742 2223333322212356789999999999999999999


Q ss_pred             hcCCcccEEEecccccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh
Q 024551           92 VFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      .+ +++|++|||||+..    ..++.+.+.++|++.+++|+.+++++++.++|+|++  .|+||+++|.++..+.|++..
T Consensus        85 ~~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~  161 (272)
T PRK08159         85 KW-GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNV  161 (272)
T ss_pred             hc-CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchh
Confidence            98 78999999999764    256778899999999999999999999999999964  489999999988888999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++||+|+.+|+|+++.|++++|||||+|+||+++|++...........  .......|++|..+|||+|++++||+++.
T Consensus       162 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~p~~r~~~peevA~~~~~L~s~~  239 (272)
T PRK08159        162 MGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYIL--KWNEYNAPLRRTVTIEEVGDSALYLLSDL  239 (272)
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHH--HHHHhCCcccccCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999998754321111111  12223578999999999999999999999


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      +.++||+.|.+|||+++
T Consensus       240 ~~~itG~~i~vdgG~~~  256 (272)
T PRK08159        240 SRGVTGEVHHVDSGYHV  256 (272)
T ss_pred             ccCccceEEEECCCcee
Confidence            99999999999999864

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=9e-48  Score=309.47  Aligned_cols=227  Identities=26%  Similarity=0.327  Sum_probs=204.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|+++|||||||||.++|++|+++|++|++++|+.++++++++++.+  ..+..+..|++|.++++++++.+.+.| 
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~-   79 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF-   79 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh-
Confidence            46789999999999999999999999999999999999999999999976  689999999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||....+++.+.+.++|++++++|+.|.++.+++++|.|.+++.|.|||+||.++..++|+...|+++|++
T Consensus        80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~a  159 (246)
T COG4221          80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAA  159 (246)
T ss_pred             CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHH
Confidence            89999999999988899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +.+|++.++.|+..++|||..|+||.+.|..+.....+...+.....   +--....+|+|||+++.|.++..
T Consensus       160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~---y~~~~~l~p~dIA~~V~~~~~~P  229 (246)
T COG4221         160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKV---YKGGTALTPEDIAEAVLFAATQP  229 (246)
T ss_pred             HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHH---hccCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999977655554444332222221   12223568999999999999743

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=2.3e-47  Score=325.32  Aligned_cols=255  Identities=28%  Similarity=0.377  Sum_probs=226.5

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ||+..+++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|++++++++++
T Consensus         1 ~~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   80 (278)
T PRK08277          1 MMPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQ   80 (278)
T ss_pred             CCCceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            35666789999999999999999999999999999999999999988888888877777899999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccc---------------cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEE
Q 024551           89 VSSVFDGKLNILVNNAALVVM---------------KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFM  153 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~v  153 (266)
                      +.+.+ +++|++|||||...+               .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++
T Consensus        81 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~i  159 (278)
T PRK08277         81 ILEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINI  159 (278)
T ss_pred             HHHHc-CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            99998 789999999996532               24567889999999999999999999999999988878999999


Q ss_pred             ecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc---hhHHHHHHHHhcCCCCCC
Q 024551          154 SSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND---LLVQEYVKLIAKTPLARS  230 (266)
Q Consensus       154 ss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~  230 (266)
                      ||..+..+.++...|++||+|+++|+|+++.|+.++|||||+|+||+++|++.+.....   .............|++|+
T Consensus       160 sS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  239 (278)
T PRK08277        160 SSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRF  239 (278)
T ss_pred             ccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCC
Confidence            99999999999999999999999999999999999999999999999999975543211   111222344566899999


Q ss_pred             CCccchHHHHHHHhcC-CCCCccccEEEeCCCccC
Q 024551          231 AEPNEISPLVAFLCLP-AASYITGQVISIDGGYTA  264 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~-~~~~~~G~~l~vdgG~~~  264 (266)
                      .+|+|+|++++||+++ .+.++||+.|.+|||++.
T Consensus       240 ~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        240 GKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             CCHHHHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence            9999999999999999 899999999999999875

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.4e-47  Score=328.21  Aligned_cols=247  Identities=26%  Similarity=0.291  Sum_probs=210.4

Q ss_pred             ccccCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc---------CC----eeEEEeccC
Q 024551           12 KKWSLRGMTALVTGG--TRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK---------GF----KVTGSVCDL   76 (266)
Q Consensus        12 ~~~~~~~k~vlItGa--s~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~---------~~----~~~~~~~D~   76 (266)
                      ..++++||++|||||  |+|||+++|++|+++|++|++ +|+.+++++++..+.+.         .+    ....+++|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            345689999999999  899999999999999999999 88988888888776531         11    146788999


Q ss_pred             --CC------------------HHHHHHHHHHHHhhcCCcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHH
Q 024551           77 --SF------------------GDQREKLIETVSSVFDGKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHL  134 (266)
Q Consensus        77 --~~------------------~~~i~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l  134 (266)
                        ++                  +++++++++++.+.+ +++|+||||||...  .+++.+.+.++|++++++|+.+++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l  160 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL  160 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence              43                  348999999999998 78999999998543  36788999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCeEEEEecCCCCCCCCCc-hhhhhhHHHHHHHHHHHHHHhcc-CCcEEEEEecCcccCCCCCCCccc
Q 024551          135 CQLAHPLLKASGNASIVFMSSVAGAISIPRL-SAYAASKGAINQLTKNLACEWAT-DSIRVNAVSPWAVNTQISPPDLND  212 (266)
Q Consensus       135 ~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~-~~y~~sK~al~~~~~~~a~el~~-~gi~v~~i~PG~v~t~~~~~~~~~  212 (266)
                      +|.++|.|+++  |+||++||..+..+.|++ ..|++||+|+++|+|+++.|+++ +|||||+|+||+++|++... ...
T Consensus       161 ~~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~-~~~  237 (303)
T PLN02730        161 LQHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA-IGF  237 (303)
T ss_pred             HHHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc-ccc
Confidence            99999999763  899999999998888866 58999999999999999999986 79999999999999998764 211


Q ss_pred             hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          213 LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      . ...........|++|+.+|+|+++.++||+++.++++||+.+.+|||++.
T Consensus       238 ~-~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        238 I-DDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             c-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence            1 11112233456888999999999999999999999999999999999875

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-47  Score=322.29  Aligned_cols=240  Identities=23%  Similarity=0.309  Sum_probs=202.0

Q ss_pred             CCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEecCC---hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           16 LRGMTALVTGG--TRGIGYAIVEELARFGASVHTCGRD---QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        16 ~~~k~vlItGa--s~giG~aia~~la~~G~~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +++|+++||||  ++|||+++|++|+++|++|++++|.   .+.++++.+++   + ...++++|++|+++++++++++.
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF---G-SDLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc---C-CcceeeccCCCHHHHHHHHHHHH
Confidence            68999999996  6899999999999999999998654   33333332222   2 33578999999999999999999


Q ss_pred             hhcCCcccEEEecccccccc----C-CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc
Q 024551           91 SVFDGKLNILVNNAALVVMK----R-ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL  165 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~  165 (266)
                      +.+ +++|++|||||.....    + +++.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..+.+.+
T Consensus        80 ~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~  156 (260)
T PRK06997         80 QHW-DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNY  156 (260)
T ss_pred             HHh-CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCc
Confidence            998 7999999999986432    2 346788999999999999999999999999953  4899999999998888999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ..|++||+|+.+|+|+++.|++++|||||+|+||+++|++.......  ...........|++|..+|||++++++||++
T Consensus       157 ~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~pedva~~~~~l~s  234 (260)
T PRK06997        157 NTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDF--GKILDFVESNAPLRRNVTIEEVGNVAAFLLS  234 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccch--hhHHHHHHhcCcccccCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999875432111  1111233445789999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccC
Q 024551          246 PAASYITGQVISIDGGYTA  264 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~  264 (266)
                      +.+.++||+.|.+|||++.
T Consensus       235 ~~~~~itG~~i~vdgg~~~  253 (260)
T PRK06997        235 DLASGVTGEITHVDSGFNA  253 (260)
T ss_pred             ccccCcceeEEEEcCChhh
Confidence            9999999999999999764

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.6e-47  Score=322.66  Aligned_cols=247  Identities=30%  Similarity=0.467  Sum_probs=218.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|++|||||++|||++++++|+++|++|++++|+ +.+++..+++.+.+.++.++++|++++++++++++++.+.+ 
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-   80 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-
Confidence            3789999999999999999999999999999999999 77888888887767789999999999999999999999998 


Q ss_pred             CcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|+||||||... ..++.+.+.+.|++++++|+.+++++++.++|+|++++ |+||++||..+..+.+....|++||+
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa  159 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKG  159 (272)
T ss_pred             CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHH
Confidence            78999999999864 35677889999999999999999999999999998765 89999999999998889999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh---HHHH-HHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL---VQEY-VKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      |+++|+++++.|++++||+||+|+||+++|++.........   .... .......|++|+.+|+|+++.++||+++..+
T Consensus       160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  239 (272)
T PRK08589        160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSS  239 (272)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            99999999999999999999999999999998754322111   0101 1122346889999999999999999999999


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      +++|+.|.+|||+..
T Consensus       240 ~~~G~~i~vdgg~~~  254 (272)
T PRK08589        240 FITGETIRIDGGVMA  254 (272)
T ss_pred             CcCCCEEEECCCccc
Confidence            999999999999764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-47  Score=321.24  Aligned_cols=248  Identities=27%  Similarity=0.371  Sum_probs=218.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .+++||+++||||++|||+++|++|+++|++|++++| +.+.++.+.+++... +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998864 667777777777643 56889999999999999999999999


Q ss_pred             hcCCcccEEEecccccc------ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc
Q 024551           92 VFDGKLNILVNNAALVV------MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL  165 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~  165 (266)
                      .+ +++|++|||||...      ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+.+
T Consensus        84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (260)
T PRK08416         84 DF-DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY  162 (260)
T ss_pred             hc-CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc
Confidence            88 78999999998652      245667789999999999999999999999999988777899999999988888999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ..|++||+|+++|+++++.|+.++|||||+|+||+++|++........  ..........|++|+.+|+|++++++||++
T Consensus       163 ~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~--~~~~~~~~~~~~~r~~~p~~va~~~~~l~~  240 (260)
T PRK08416        163 AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYE--EVKAKTEELSPLNRMGQPEDLAGACLFLCS  240 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCH--HHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999865432211  112334456789999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccC
Q 024551          246 PAASYITGQVISIDGGYTA  264 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~  264 (266)
                      +...+++|+.+.+|||+++
T Consensus       241 ~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        241 EKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             hhhhcccCcEEEEcCCeec
Confidence            9999999999999999875

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=7.4e-47  Score=318.10  Aligned_cols=247  Identities=30%  Similarity=0.449  Sum_probs=217.9

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++||+++|||+++|||++++++|+++|++|++++++..  ++..+++.+.+.++..+++|++|+++++++++++.+.
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999998887543  4455566655668889999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      + +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.+++ .|+||++||..+..+.+....|+++
T Consensus        83 ~-~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (253)
T PRK08993         83 F-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS  161 (253)
T ss_pred             h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHH
Confidence            8 7899999999987777788889999999999999999999999999998764 5899999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+|+++++++++.|+.++||+||+|+||+++|++........  ..........|.+|+.+|+|+|+.++||+++.+.++
T Consensus       162 Kaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~  239 (253)
T PRK08993        162 KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADE--QRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYI  239 (253)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccch--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999999999999999999865432221  112344567889999999999999999999999999


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      +|+.+.+|||+.+
T Consensus       240 ~G~~~~~dgg~~~  252 (253)
T PRK08993        240 NGYTIAVDGGWLA  252 (253)
T ss_pred             cCcEEEECCCEec
Confidence            9999999999864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7e-47  Score=319.28  Aligned_cols=245  Identities=25%  Similarity=0.350  Sum_probs=215.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++||||++|||++++++|+++|++|++++|+++.+++..+++.+.+ +++++++|++|+++++++++++.+.+ +++|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id   78 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELL-GGID   78 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            379999999999999999999999999999999999988888887654 78899999999999999999999988 7899


Q ss_pred             EEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh-cCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           99 ILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        99 ~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|||||...  ..++.+.+.++|.+.+++|+.+++++++.++|.|.+ ++.|+||++||..+..+.+....|+++|+|+
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~  158 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGL  158 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHH
Confidence            9999999753  345777889999999999999999999999998864 4578999999999998899999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-------hhHHH-HHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-------LLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ++|+|+++.|++++|||||+|+||+++|++.+.....       ..... ........|++|+.+|+|+|++++||+++.
T Consensus       159 ~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        159 VQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             HHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999986532110       01111 123445679999999999999999999999


Q ss_pred             CCCccccEEEeCCCccCC
Q 024551          248 ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~~  265 (266)
                      ++++||++|.+|||+.++
T Consensus       239 ~~~itG~~i~vdgg~~~~  256 (259)
T PRK08340        239 AEYMLGSTIVFDGAMTRG  256 (259)
T ss_pred             cccccCceEeecCCcCCC
Confidence            999999999999998764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-46  Score=317.54  Aligned_cols=248  Identities=31%  Similarity=0.469  Sum_probs=222.5

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++||++|||||++|||++++++|+++|++|++++|+ +..+++.+.+.+.+.++.++++|+++.++++++++++.+.
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345889999999999999999999999999999999998 5666777777666678899999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+.+..|+++|
T Consensus        89 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (258)
T PRK06935         89 F-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASK  167 (258)
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHH
Confidence            8 789999999998777788888999999999999999999999999999988789999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++++++++.|+.++|||||.|+||+++|++........  ..........|.+|+.+|+|++++++||+++.+++++
T Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  245 (258)
T PRK06935        168 HGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADK--NRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVN  245 (258)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCC
Confidence            99999999999999999999999999999999865433222  1223445567899999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+++.+|||++.
T Consensus       246 G~~i~~dgg~~~  257 (258)
T PRK06935        246 GHILAVDGGWLV  257 (258)
T ss_pred             CCEEEECCCeec
Confidence            999999999864

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-46  Score=317.88  Aligned_cols=244  Identities=32%  Similarity=0.410  Sum_probs=213.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++++|++|+++++++++++.+.+ 
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   78 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF-   78 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            478999999999999999999999999999999999988777776665   4578899999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||||......+ +.+.++|++.+++|+.+++++++.++|.|+ ++.|+||++||..+..+.+++..|+++|++
T Consensus        79 g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa  156 (261)
T PRK08265         79 GRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAA  156 (261)
T ss_pred             CCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence            789999999997654433 568899999999999999999999999997 557899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHH-HhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKL-IAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      +++++++++.|+.++|||||+|+||+++|++......... ...... ....|++|..+|+|+|++++||+++...++||
T Consensus       157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~-~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG  235 (261)
T PRK08265        157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDR-AKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTG  235 (261)
T ss_pred             HHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccch-hHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccC
Confidence            9999999999999999999999999999998654322111 111122 22468899999999999999999999999999


Q ss_pred             cEEEeCCCccCC
Q 024551          254 QVISIDGGYTAG  265 (266)
Q Consensus       254 ~~l~vdgG~~~~  265 (266)
                      +.|.+|||++..
T Consensus       236 ~~i~vdgg~~~~  247 (261)
T PRK08265        236 ADYAVDGGYSAL  247 (261)
T ss_pred             cEEEECCCeecc
Confidence            999999998764

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=8.3e-48  Score=321.64  Aligned_cols=234  Identities=38%  Similarity=0.523  Sum_probs=208.7

Q ss_pred             cCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEe
Q 024551           25 GGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVN  102 (266)
Q Consensus        25 Gas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~  102 (266)
                      |++  +|||+++|++|+++|++|++++|+.+.+++..+++.+..+ ..++++|++++++++++++++.+.+++++|++||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  9999999999999999999999999987777777665432 2259999999999999999999998578999999


Q ss_pred             ccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551          103 NAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus       103 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      |+|....    .++.+.+.++|++.+++|+.+++.++|++.|+|+++  |+||++||..+..+.+++..|+++|+|+++|
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l  157 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGL  157 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHH
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHH
Confidence            9998765    678888999999999999999999999999988875  7999999999999999999999999999999


Q ss_pred             HHHHHHHhcc-CCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEE
Q 024551          179 TKNLACEWAT-DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS  257 (266)
Q Consensus       179 ~~~~a~el~~-~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~  257 (266)
                      +|+++.||++ +|||||+|+||+++|++......  ............|++|..+|+|||++++||+|+.++|+|||+|.
T Consensus       158 ~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~--~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~  235 (241)
T PF13561_consen  158 TRSLAKELAPKKGIRVNAVSPGPIETPMTERIPG--NEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIP  235 (241)
T ss_dssp             HHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHT--HHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEE
T ss_pred             HHHHHHHhccccCeeeeeecccceeccchhcccc--ccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEE
Confidence            9999999999 99999999999999987433211  22334566778999999999999999999999999999999999


Q ss_pred             eCCCcc
Q 024551          258 IDGGYT  263 (266)
Q Consensus       258 vdgG~~  263 (266)
                      ||||++
T Consensus       236 vDGG~s  241 (241)
T PF13561_consen  236 VDGGFS  241 (241)
T ss_dssp             ESTTGG
T ss_pred             ECCCcC
Confidence            999986

...

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-46  Score=317.24  Aligned_cols=242  Identities=20%  Similarity=0.207  Sum_probs=205.3

Q ss_pred             cCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEecCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           15 SLRGMTALVTGG--TRGIGYAIVEELARFGASVHTCGRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        15 ~~~~k~vlItGa--s~giG~aia~~la~~G~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|+.  +.++++.+++   +.++.++++|++|+++++++++++.
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            378999999999  89999999999999999999998764  4445555544   3367789999999999999999999


Q ss_pred             hhcCCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCch
Q 024551           91 SVFDGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  166 (266)
                      +.+ +++|++|||||+...    .++.+.++++|++.+++|+.+++++++.++|+|++  .|+||++++.. ..+.+.+.
T Consensus        81 ~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~  156 (256)
T PRK07889         81 EHV-DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYD  156 (256)
T ss_pred             HHc-CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccc
Confidence            988 789999999998643    35677889999999999999999999999999974  47999998753 45667888


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCC-CCCCccchHHHHHHHhc
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA-RSAEPNEISPLVAFLCL  245 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~eia~~~~~l~s  245 (266)
                      .|++||+|+.+|+|+++.|++++|||||+|+||+++|++.........  .........|++ |+.+|+|+|+.++||++
T Consensus       157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~p~~~~~~~p~evA~~v~~l~s  234 (256)
T PRK07889        157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFEL--LEEGWDERAPLGWDVKDPTPVARAVVALLS  234 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHH--HHHHHHhcCccccccCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999998654321111  112334456887 68999999999999999


Q ss_pred             CCCCCccccEEEeCCCccCC
Q 024551          246 PAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +...++||+++.+|||++..
T Consensus       235 ~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        235 DWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             cccccccceEEEEcCceecc
Confidence            99999999999999998764

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=4.8e-46  Score=319.68  Aligned_cols=246  Identities=30%  Similarity=0.378  Sum_probs=215.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC--hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD--QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++|+++||||++|||++++++|+++|++|++.+|+  .+..+++.+.+.+.+.++.++++|++|+++++++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999998765  34556666666666778889999999999999999999998


Q ss_pred             cCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      + +++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..+.+....|+++
T Consensus       126 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~as  202 (294)
T PRK07985        126 L-GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAAT  202 (294)
T ss_pred             h-CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHH
Confidence            8 78999999999753 456778899999999999999999999999999965  3799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+|+++|+++++.|++++|||||+|+||+++|++........  ..........|++|..+|+|+|++++||+++++.++
T Consensus       203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~i  280 (294)
T PRK07985        203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ--DKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYV  280 (294)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCH--HHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCc
Confidence            999999999999999999999999999999999854321111  112334556799999999999999999999999999


Q ss_pred             cccEEEeCCCccCC
Q 024551          252 TGQVISIDGGYTAG  265 (266)
Q Consensus       252 ~G~~l~vdgG~~~~  265 (266)
                      ||+.|.+|||++++
T Consensus       281 tG~~i~vdgG~~~~  294 (294)
T PRK07985        281 TAEVHGVCGGEHLG  294 (294)
T ss_pred             cccEEeeCCCeeCc
Confidence            99999999998764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-46  Score=313.04  Aligned_cols=249  Identities=30%  Similarity=0.504  Sum_probs=226.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||+++||||+++||++++++|+++|++|++++|+++.+++..+.+.+.+.++.++++|++|+++++++++++.+.+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            46889999999999999999999999999999999999998888888887767789999999999999999999999988


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||+|.....++.+.+.++|++.+++|+.+++++++.+.+.|.+++.|+||++||..+..+.+++..|+++|+
T Consensus        86 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~  164 (255)
T PRK07523         86 -GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKG  164 (255)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHH
Confidence             7899999999988777888899999999999999999999999999998877899999999998888999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      ++++++++++.|++++||+|++|+||+++|++..........  ........|++|+..|+|+|++++||+++++.++||
T Consensus       165 a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  242 (255)
T PRK07523        165 AVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEF--SAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNG  242 (255)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHH--HHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccC
Confidence            999999999999999999999999999999986654332222  134455678999999999999999999999999999


Q ss_pred             cEEEeCCCccCC
Q 024551          254 QVISIDGGYTAG  265 (266)
Q Consensus       254 ~~l~vdgG~~~~  265 (266)
                      +.|.+|||.+.+
T Consensus       243 ~~i~~~gg~~~~  254 (255)
T PRK07523        243 HVLYVDGGITAS  254 (255)
T ss_pred             cEEEECCCeecc
Confidence            999999998765

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-46  Score=320.13  Aligned_cols=240  Identities=26%  Similarity=0.366  Sum_probs=212.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh---------hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ---------NMINERIQEWESKGFKVTGSVCDLSFGDQREKL   85 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~   85 (266)
                      .++||+++||||++|||+++|++|+++|++|++++|+.         +.++++.+++...+.++.++.+|++|+++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            36899999999999999999999999999999998876         777888888877777889999999999999999


Q ss_pred             HHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC------CCeEEEEecCCCC
Q 024551           86 IETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG------NASIVFMSSVAGA  159 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~------~g~iv~vss~~~~  159 (266)
                      ++++.+.+ +++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|+++.      .|+||++||.++.
T Consensus        83 ~~~~~~~~-g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         83 VDAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            99999998 7899999999988777888899999999999999999999999999997542      3799999999999


Q ss_pred             CCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCC--CCCCccchH
Q 024551          160 ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA--RSAEPNEIS  237 (266)
Q Consensus       160 ~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~eia  237 (266)
                      .+.+++..|++||+|+++|+++++.|++++|||||+|+|| ++|++.....        .......+.+  +..+|||+|
T Consensus       162 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~--------~~~~~~~~~~~~~~~~pedva  232 (286)
T PRK07791        162 QGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF--------AEMMAKPEEGEFDAMAPENVS  232 (286)
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH--------HHHHhcCcccccCCCCHHHHH
Confidence            9999999999999999999999999999999999999999 7888753321        1111223433  467899999


Q ss_pred             HHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          238 PLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ++++||+++.+.++||++|.+|||+..
T Consensus       233 ~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        233 PLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             HHHHHHhCchhcCCCCcEEEEcCCceE
Confidence            999999999999999999999999864

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-46  Score=312.52  Aligned_cols=245  Identities=31%  Similarity=0.410  Sum_probs=213.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEec-CChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh--
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV--   92 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~--   92 (266)
                      +++|+++||||++|||++++++|+++|++|++.. |+.+.+++..+++...+..+..+++|+++.++++++++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999998874 6777788888888777777889999999999999999988763  


Q ss_pred             --cC-CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           93 --FD-GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        93 --~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                        ++ +++|++|||||.....++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+..+.+....|+
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  159 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYS  159 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchhHH
Confidence              21 37999999999876667888899999999999999999999999999976  37999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+++++++++++.|++++|||||+|+||+++|++...........  .......|++|+.+|+|+|++++||+++...
T Consensus       160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  237 (252)
T PRK12747        160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMK--QYATTISAFNRLGEVEDIADTAAFLASPDSR  237 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHH--HHHHhcCcccCCCCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999999999999865433222111  1112234788999999999999999999999


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      ++||+.+.+|||+.+
T Consensus       238 ~~~G~~i~vdgg~~~  252 (252)
T PRK12747        238 WVTGQLIDVSGGSCL  252 (252)
T ss_pred             CcCCcEEEecCCccC
Confidence            999999999999864

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-45  Score=310.60  Aligned_cols=247  Identities=32%  Similarity=0.440  Sum_probs=223.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++++|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999999999998888887777788899999999999999999999998


Q ss_pred             CCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|++|||+|... ..++.+.+.++|++.+++|+.+++++++.++|+|++++.++|+++||..+..+.+++..|++||
T Consensus        84 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK07035         84 -GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITK  162 (252)
T ss_pred             -CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHH
Confidence             78999999999653 4567778999999999999999999999999999887789999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++|+++++.|+.++||+|++|+||+++|++.........  .........|.+|..+|+|+|+.++||+++...+++
T Consensus       163 ~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  240 (252)
T PRK07035        163 AAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDA--ILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTT  240 (252)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHH--HHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCcc
Confidence            999999999999999999999999999999998765443321  123445567889999999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 024551          253 GQVISIDGGYT  263 (266)
Q Consensus       253 G~~l~vdgG~~  263 (266)
                      |+.+.+|||++
T Consensus       241 g~~~~~dgg~~  251 (252)
T PRK07035        241 GECLNVDGGYL  251 (252)
T ss_pred             CCEEEeCCCcC
Confidence            99999999975

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-46  Score=311.11  Aligned_cols=249  Identities=33%  Similarity=0.464  Sum_probs=224.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +.+++|+++||||+++||++++++|+++|++|++++|+++.+++..+++.+.+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            44789999999999999999999999999999999999999888888887777789999999999999999999999998


Q ss_pred             CCcccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|++|||+|.... .++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.+++..|+++|
T Consensus        83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         83 -GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence             789999999998654 347788999999999999999999999999999887778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++|+++++.|+.++||+|++|+||+++|++..+.... ............|+.|..+|+|+++.++||+++...+++
T Consensus       162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~  240 (253)
T PRK06172        162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA-DPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTT  240 (253)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc-ChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcC
Confidence            9999999999999999999999999999999987664321 122223445567889999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.|.+|||+++
T Consensus       241 G~~i~~dgg~~~  252 (253)
T PRK06172        241 GHALMVDGGATA  252 (253)
T ss_pred             CcEEEECCCccC
Confidence            999999999864

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-46  Score=313.89  Aligned_cols=246  Identities=29%  Similarity=0.333  Sum_probs=212.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +.+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++++|++|+++++++++++.+.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            3478999999999999999999999999999999999998887776655   4468889999999999999999999998


Q ss_pred             CCcccEEEecccccc-ccCCCCCCHHH----HHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           94 DGKLNILVNNAALVV-MKRATEYTLEE----YSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        94 ~~~id~lv~~ag~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                       +++|++|||||+.. ..++.+.+.++    |++++++|+.+++.+++.++|.|+++ .|+||+++|..+..+.++...|
T Consensus        79 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y  156 (263)
T PRK06200         79 -GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLY  156 (263)
T ss_pred             -CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchh
Confidence             78999999999864 34555666665    89999999999999999999999766 4899999999999888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-------chhHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-------DLLVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      ++||+++++|+++++.|++++ ||||+|+||+++|++......       ..............|++|..+|+|++++++
T Consensus       157 ~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~  235 (263)
T PRK06200        157 TASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYV  235 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhh
Confidence            999999999999999999985 999999999999998643210       001111234455679999999999999999


Q ss_pred             HHhcCC-CCCccccEEEeCCCccCC
Q 024551          242 FLCLPA-ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       242 ~l~s~~-~~~~~G~~l~vdgG~~~~  265 (266)
                      ||+++. +.|+||+.|.+|||+++.
T Consensus       236 fl~s~~~~~~itG~~i~vdgG~~~~  260 (263)
T PRK06200        236 LLASRRNSRALTGVVINADGGLGIR  260 (263)
T ss_pred             heecccccCcccceEEEEcCceeec
Confidence            999998 999999999999998865

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=2e-45  Score=309.72  Aligned_cols=247  Identities=30%  Similarity=0.389  Sum_probs=221.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++++++++++++++.+.+ +++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence            7899999999999999999999999999999999999888888887767788899999999999999999999998 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      |++|||||.....++.+.+.++|++.+++|+.+++++++.+++.|++.+ .++||++||..+..+.++...|+++|++++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR  160 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence            9999999987777788889999999999999999999999999998764 579999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-------hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-------LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      .|++.++.|+.++||+|++|+||+++|+++......       .............|.+|+.+|||+++.++||+++...
T Consensus       161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~  240 (256)
T PRK08643        161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSD  240 (256)
T ss_pred             HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999999999999999999999986542110       0111123344567889999999999999999999999


Q ss_pred             CccccEEEeCCCccCC
Q 024551          250 YITGQVISIDGGYTAG  265 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~~  265 (266)
                      ++||+.|.+|||++++
T Consensus       241 ~~~G~~i~vdgg~~~~  256 (256)
T PRK08643        241 YITGQTIIVDGGMVFH  256 (256)
T ss_pred             CccCcEEEeCCCeecC
Confidence            9999999999999875

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=2.5e-45  Score=307.57  Aligned_cols=245  Identities=32%  Similarity=0.479  Sum_probs=216.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++||+++||||++|||++++++|+++|++|++++|+..  ++..+.+.+.+.++.++++|+++++++.++++++.+.+ 
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF-   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            578999999999999999999999999999999999753  45556666656788999999999999999999999888 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .|+||++||..+..+.+....|+++|+
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  158 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKH  158 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence            7899999999998777788889999999999999999999999999998765 689999999998888888999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      ++++++++++.|+.++||+||+|+||+++|++.........  .........|.+|+.+|+|+|++++||+++...+++|
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (248)
T TIGR01832       159 GVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADED--RNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNG  236 (248)
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChH--HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCC
Confidence            99999999999999999999999999999998654322211  1123445678899999999999999999999999999


Q ss_pred             cEEEeCCCccC
Q 024551          254 QVISIDGGYTA  264 (266)
Q Consensus       254 ~~l~vdgG~~~  264 (266)
                      +++.+|||+..
T Consensus       237 ~~i~~dgg~~~  247 (248)
T TIGR01832       237 YTLAVDGGWLA  247 (248)
T ss_pred             cEEEeCCCEec
Confidence            99999999763

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=9.9e-46  Score=312.16  Aligned_cols=237  Identities=29%  Similarity=0.414  Sum_probs=209.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++||+++||||++|||++++++|+++|++|++++|+.+..           .++.++++|++|+++++++++++.+.+ 
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~-   70 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY-   70 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            57899999999999999999999999999999999986532           257889999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+.+..|+++|++
T Consensus        71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa  150 (258)
T PRK06398         71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHA  150 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHH
Confidence            78999999999887778888999999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc------ch-hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN------DL-LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +++|+++++.|+.++ |+||+|+||+++|++......      .. ............|++|..+|+|+|++++||+++.
T Consensus       151 l~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        151 VLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             HHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999986 999999999999998654211      11 1111122334578899999999999999999999


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      ..+++|+.+.+|||++.
T Consensus       230 ~~~~~G~~i~~dgg~~~  246 (258)
T PRK06398        230 ASFITGECVTVDGGLRA  246 (258)
T ss_pred             cCCCCCcEEEECCcccc
Confidence            99999999999999864

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-45  Score=309.38  Aligned_cols=247  Identities=30%  Similarity=0.414  Sum_probs=217.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++++|+++|||+++|||++++++|+++|++|++++|+++.+++..+++... +.++.++++|++|++++++++++    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            4578999999999999999999999999999999999999888888887654 45788999999999999988764    


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||+|....+++.+.+.++|++++++|+.+++++++.++|.|++++.|+||+++|..+..+.+.+..|+++|
T Consensus        79 ~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask  157 (259)
T PRK06125         79 A-GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGN  157 (259)
T ss_pred             h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHH
Confidence            3 689999999998777788899999999999999999999999999999987778999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc------hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND------LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      +|+++|+++++.|+.++|||||+|+||+++|++....+..      .....+.......|.+|+.+|+|+|++++||+++
T Consensus       158 ~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (259)
T PRK06125        158 AALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASP  237 (259)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999864432110      0112233445567889999999999999999999


Q ss_pred             CCCCccccEEEeCCCccCC
Q 024551          247 AASYITGQVISIDGGYTAG  265 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~~  265 (266)
                      .+.++||+.|.+|||++.-
T Consensus       238 ~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        238 RSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             hhccccCceEEecCCeeec
Confidence            9999999999999997653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-45  Score=305.81  Aligned_cols=250  Identities=30%  Similarity=0.465  Sum_probs=227.6

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++++||+++||||+++||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|++++.++++++.+.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            67789999999999999999999999999999999999999888888888877778999999999999999999999998


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++|
T Consensus        86 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  164 (256)
T PRK06124         86 H-GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAK  164 (256)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHH
Confidence            8 789999999998777788888999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++++++.++.|+.++||+|++|+||+++|++...........  .......|.+++.+|+|++++++||+++.++++|
T Consensus       165 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  242 (256)
T PRK06124        165 QGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVG--PWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVN  242 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHH--HHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcC
Confidence            99999999999999999999999999999999865443222222  3344567889999999999999999999999999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      |+.+.+|||+..+
T Consensus       243 G~~i~~dgg~~~~  255 (256)
T PRK06124        243 GHVLAVDGGYSVH  255 (256)
T ss_pred             CCEEEECCCcccc
Confidence            9999999998865

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.6e-45  Score=305.78  Aligned_cols=240  Identities=33%  Similarity=0.390  Sum_probs=214.2

Q ss_pred             cCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCC-----------hhHHHHHHHHHHhcCCeeEEEeccCCCHHH
Q 024551           15 SLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRD-----------QNMINERIQEWESKGFKVTGSVCDLSFGDQ   81 (266)
Q Consensus        15 ~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~   81 (266)
                      .++||+++||||+  +|||+++|++|+++|++|++++|+           .+..+++.+++.+.+.++.++++|++|+++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            5889999999999  499999999999999999987532           334455666777777889999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC
Q 024551           82 REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS  161 (266)
Q Consensus        82 i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~  161 (266)
                      ++++++++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+
T Consensus        83 i~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  161 (256)
T PRK12859         83 PKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP  161 (256)
T ss_pred             HHHHHHHHHHHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence            999999999988 7899999999987777888999999999999999999999999999998877899999999999999


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      .+++..|+++|+++++|+++++.++.++||+|++|+||+++|++....       .........|.++..+|+|+|+.++
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~-------~~~~~~~~~~~~~~~~~~d~a~~~~  234 (256)
T PRK12859        162 MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE-------IKQGLLPMFPFGRIGEPKDAARLIK  234 (256)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH-------HHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999999999874421       1123345668889999999999999


Q ss_pred             HHhcCCCCCccccEEEeCCCc
Q 024551          242 FLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      ||+++...+++|++|.+|||+
T Consensus       235 ~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        235 FLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHhCccccCccCcEEEeCCCc
Confidence            999999999999999999995

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-44  Score=305.34  Aligned_cols=246  Identities=30%  Similarity=0.390  Sum_probs=219.6

Q ss_pred             cccCCCCEEEEecCCC-chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-C-CeeEEEeccCCCHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTR-GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-G-FKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        13 ~~~~~~k~vlItGas~-giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ...+++|+++||||++ |||++++++|+++|++|++++|+.+.+++..+++++. + .++.++++|++++++++++++++
T Consensus        12 ~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   91 (262)
T PRK07831         12 HGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA   91 (262)
T ss_pred             ccccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3456899999999985 9999999999999999999999999888888887652 3 47889999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      .+.+ +++|++|||+|....+++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||+++|..+..+.++...|
T Consensus        92 ~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  170 (262)
T PRK07831         92 VERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHY  170 (262)
T ss_pred             HHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcch
Confidence            9988 7899999999987777888899999999999999999999999999998776 7899999999999888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +++|+|+++|+++++.|++++|||||+|+||+++|++.........   ........|++|..+|+|+|+.++||+++.+
T Consensus       171 ~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~---~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~  247 (262)
T PRK07831        171 AAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAEL---LDELAAREAFGRAAEPWEVANVIAFLASDYS  247 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9999999999999999999999999999999999998654322221   1233446789999999999999999999999


Q ss_pred             CCccccEEEeCCCc
Q 024551          249 SYITGQVISIDGGY  262 (266)
Q Consensus       249 ~~~~G~~l~vdgG~  262 (266)
                      .++||++|.+|+++
T Consensus       248 ~~itG~~i~v~~~~  261 (262)
T PRK07831        248 SYLTGEVVSVSSQH  261 (262)
T ss_pred             cCcCCceEEeCCCC
Confidence            99999999999975

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.3e-44  Score=305.05  Aligned_cols=250  Identities=41%  Similarity=0.693  Sum_probs=226.0

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .+++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++++|++++++++++++++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999999998888888765  568999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      .+.+ +++|++|||+|.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.+....|+
T Consensus        83 ~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~  161 (257)
T PRK09242         83 EDHW-DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYG  161 (257)
T ss_pred             HHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchH
Confidence            9998 789999999998766677788999999999999999999999999999887779999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      ++|++++.|+++++.|+.++||+|++|+||+++|++..........  ........|.++..+|+|++++++||+++...
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  239 (257)
T PRK09242        162 MTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDY--YEQVIERTPMRRVGEPEEVAAAVAFLCMPAAS  239 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHH--HHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999987765433222  23345567889999999999999999998888


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      +++|+.+.+|||.+.
T Consensus       240 ~~~g~~i~~~gg~~~  254 (257)
T PRK09242        240 YITGQCIAVDGGFLR  254 (257)
T ss_pred             cccCCEEEECCCeEe
Confidence            999999999999764

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3.2e-45  Score=302.76  Aligned_cols=223  Identities=25%  Similarity=0.353  Sum_probs=204.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++|+++|||||+|||+++|++|+++|++|++++|++++++++++++.+. +..++++++|+++++++..+.+++.+..
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            357899999999999999999999999999999999999999999999876 5789999999999999999999999986


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       .+||+||||||+...+++.+.++++.++++++|+.+...++++++|.|.+++.|.||||+|.++..+.|....|++||+
T Consensus        83 -~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa  161 (265)
T COG0300          83 -GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKA  161 (265)
T ss_pred             -CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHH
Confidence             6899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      ++.+|+++|+.|+.++||+|.+++||++.|++.......        .....+...+.+|+++|+..++.+..
T Consensus       162 ~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~--------~~~~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         162 FVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSD--------VYLLSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccc--------cccccchhhccCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999998621111        11123455678999999999988853

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=8.9e-45  Score=312.79  Aligned_cols=246  Identities=33%  Similarity=0.442  Sum_probs=216.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++||++|||||++|||++++++|+++|++|+++.++.  ...+++.+.+...+.++.++++|++|+++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999887754  3456677777776778999999999999999999999999


Q ss_pred             cCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.+++++++.++|+|++  .++||++||..++.+.+.+..|++|
T Consensus       132 ~-g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~as  208 (300)
T PRK06128        132 L-GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYAST  208 (300)
T ss_pred             h-CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHH
Confidence            8 78999999999764 456888899999999999999999999999999965  4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+++++|+++++.++.++||+||+|+||+++|++.......  ......+....|++|..+|+|++.+++||+++...++
T Consensus       209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~  286 (300)
T PRK06128        209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQP--PEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYV  286 (300)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCC--HHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            99999999999999999999999999999999986542111  1112334456799999999999999999999999999


Q ss_pred             cccEEEeCCCccCC
Q 024551          252 TGQVISIDGGYTAG  265 (266)
Q Consensus       252 ~G~~l~vdgG~~~~  265 (266)
                      +|+.|.+|||+.++
T Consensus       287 ~G~~~~v~gg~~~~  300 (300)
T PRK06128        287 TGEVFGVTGGLLLS  300 (300)
T ss_pred             cCcEEeeCCCEeCc
Confidence            99999999998753

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.9e-44  Score=303.66  Aligned_cols=246  Identities=30%  Similarity=0.469  Sum_probs=220.8

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++.+|++|.++++++++.+.+.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999988888888776778889999999999999999999998


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||+|.....++ +.+.++|++.+++|+.+++++++++.|+|.+.+.++||++||..+..+.+++..|+++|
T Consensus        86 ~-~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  163 (255)
T PRK06113         86 L-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_pred             c-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHH
Confidence            8 789999999998655544 67899999999999999999999999999877778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++|+++++.++..+|||||.|+||+++|++..........   .......|++++.+|+|++++++||+++...+++
T Consensus       164 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~  240 (255)
T PRK06113        164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIE---QKMLQHTPIRRLGQPQDIANAALFLCSPAASWVS  240 (255)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence            9999999999999999999999999999999987654322221   2334567888999999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 024551          253 GQVISIDGGYT  263 (266)
Q Consensus       253 G~~l~vdgG~~  263 (266)
                      |+.|.+|||..
T Consensus       241 G~~i~~~gg~~  251 (255)
T PRK06113        241 GQILTVSGGGV  251 (255)
T ss_pred             CCEEEECCCcc
Confidence            99999999964

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.6e-47  Score=288.20  Aligned_cols=241  Identities=32%  Similarity=0.383  Sum_probs=220.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++.|+++++||+..|||++++++|++.|++|+.++|+++.++.+.++.   ...+..++.|+++.+.+.+.+..+    
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v----   75 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPV----   75 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhccc----
Confidence            4579999999999999999999999999999999999999988887765   456888999999988877776654    


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHH-HhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLL-KASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m-~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|.+|||||+....++.+.+.+.+++.|++|+.+.+.++|...+-+ .++..|.||++||.++.++..+...|+++|
T Consensus        76 -~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatK  154 (245)
T KOG1207|consen   76 -FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATK  154 (245)
T ss_pred             -CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecH
Confidence             689999999999999999999999999999999999999999976644 455578999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +|+++++|+++.|+++++||||++.|-.+.|+|.+..+.++...  ..+..+.|++|+.+.+|+.++++||+|+.++..|
T Consensus       155 aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~--k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmtt  232 (245)
T KOG1207|consen  155 AALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKK--KKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTT  232 (245)
T ss_pred             HHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhc--cchhhhCchhhhhHHHHHHhhheeeeecCcCccc
Confidence            99999999999999999999999999999999999887766544  6677889999999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |.+|+++||++.
T Consensus       233 GstlpveGGfs~  244 (245)
T KOG1207|consen  233 GSTLPVEGGFSN  244 (245)
T ss_pred             CceeeecCCccC
Confidence            999999999974

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=8.4e-45  Score=309.87  Aligned_cols=253  Identities=30%  Similarity=0.383  Sum_probs=215.5

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      -+..++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.. +.++.++++|++|+++++++++++.
T Consensus        11 ~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~   89 (280)
T PLN02253         11 LPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTV   89 (280)
T ss_pred             ccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHH
Confidence            334567899999999999999999999999999999999998887777776633 4578899999999999999999999


Q ss_pred             hhcCCcccEEEeccccccc--cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           91 SVFDGKLNILVNNAALVVM--KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      +.+ +++|+||||||....  .++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||+++|..+..+.++...|
T Consensus        90 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y  168 (280)
T PLN02253         90 DKF-GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAY  168 (280)
T ss_pred             HHh-CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCccc
Confidence            998 789999999997642  45778899999999999999999999999999987777999999999998888888899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh--HHHH---HHH-HhcCCC-CCCCCccchHHHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL--VQEY---VKL-IAKTPL-ARSAEPNEISPLVA  241 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~--~~~~---~~~-~~~~~~-~~~~~~~eia~~~~  241 (266)
                      ++||+++++++++++.|++.+||+|++++||+++|++.....+...  ....   ... ....++ ++..+|+|++++++
T Consensus       169 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~  248 (280)
T PLN02253        169 TGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVL  248 (280)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999987644322211  0100   111 112333 56689999999999


Q ss_pred             HHhcCCCCCccccEEEeCCCccCC
Q 024551          242 FLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ||+++...|++|+.|.+|||++..
T Consensus       249 ~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
T PLN02253        249 FLASDEARYISGLNLMIDGGFTCT  272 (280)
T ss_pred             hhcCcccccccCcEEEECCchhhc
Confidence            999999999999999999998753

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-44  Score=305.89  Aligned_cols=252  Identities=28%  Similarity=0.500  Sum_probs=225.5

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ..+++++|+++||||+++||++++++|+++|++|++++|+++.+++..+.+...+.++.++++|++|+++++++++++.+
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999888888877777899999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ +++|++|||+|.....++.+.+.++|++++++|+.+++.+++.++|+|++++.++||++||..+..+.+++..|+++
T Consensus        84 ~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (265)
T PRK07097         84 EV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAA  162 (265)
T ss_pred             hC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHH
Confidence            98 78999999999987778888999999999999999999999999999988878999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc----chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN----DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |+++++|+++++.++.++||+|++|+||+++|++..+...    ..............|.+++.+|+|+|+.++||+++.
T Consensus       163 Kaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  242 (265)
T PRK07097        163 KGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDA  242 (265)
T ss_pred             HHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999997654321    011111123344668889999999999999999998


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      ..+++|+++.+|||+..
T Consensus       243 ~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        243 SNFVNGHILYVDGGILA  259 (265)
T ss_pred             cCCCCCCEEEECCCcee
Confidence            99999999999999764

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-44  Score=305.52  Aligned_cols=250  Identities=32%  Similarity=0.436  Sum_probs=217.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+ .++..+++.+.+.++.++++|++++++++++++++.+.+ 
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   80 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE-   80 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            478999999999999999999999999999999999875 445556665556688899999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC-CCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG-AISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~-~~~~~~~~~y~~sK~  173 (266)
                      +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++|+|.+++.++||++||..+ ..+.+.+..|+.+|+
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~  160 (263)
T PRK08226         81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA  160 (263)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHH
Confidence            7899999999988777888889999999999999999999999999998777789999999887 456678899999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc----chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN----DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      ++++++++++.++.++||+|++|+||+++|++......    ..............|++|+.+|+|+|+.++||+++.+.
T Consensus       161 a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~  240 (263)
T PRK08226        161 AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESS  240 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhc
Confidence            99999999999999999999999999999997643211    11112223444567899999999999999999999999


Q ss_pred             CccccEEEeCCCccCCC
Q 024551          250 YITGQVISIDGGYTAGN  266 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~~~  266 (266)
                      ++||++|.+|||.++.+
T Consensus       241 ~~~g~~i~~dgg~~~~~  257 (263)
T PRK08226        241 YLTGTQNVIDGGSTLPE  257 (263)
T ss_pred             CCcCceEeECCCcccCc
Confidence            99999999999998753

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3e-44  Score=303.45  Aligned_cols=247  Identities=30%  Similarity=0.456  Sum_probs=220.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC-hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++||||++|||++++++|+++|++|+++.|+ .+..++..+++...+.++.++++|++|.++++++++++.+.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999998884 556677777777667788899999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|++|||+|...+.++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .|+||++||..+..+.+.+..|+++|
T Consensus        84 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  162 (261)
T PRK08936         84 -GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASK  162 (261)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHH
Confidence             7899999999988777788889999999999999999999999999998764 68999999999888999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +|+++|+++++.++.++||+|++|+||+++|++....+....  .........|.+++.+|+|+++.++||+++.+.+++
T Consensus       163 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  240 (261)
T PRK08936        163 GGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPK--QRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVT  240 (261)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHH--HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence            999999999999999999999999999999998664432221  123344567889999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.+.+|||+++
T Consensus       241 G~~i~~d~g~~~  252 (261)
T PRK08936        241 GITLFADGGMTL  252 (261)
T ss_pred             CcEEEECCCccc
Confidence            999999999875

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=5e-45  Score=308.46  Aligned_cols=246  Identities=28%  Similarity=0.365  Sum_probs=207.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.   .+.++.++++|++|.++++++++++.+.+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999998877665543   24578899999999999999999999988


Q ss_pred             CCcccEEEeccccccc-cCCCCCCH----HHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           94 DGKLNILVNNAALVVM-KRATEYTL----EEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                       +++|++|||||.... .++.+.+.    ++|++.+++|+.++++++++++|.|.+++ |+||+++|..+..+.+....|
T Consensus        78 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y  155 (262)
T TIGR03325        78 -GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLY  155 (262)
T ss_pred             -CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchh
Confidence             789999999997532 33444333    57999999999999999999999997764 899999999999888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc---cch---hHHHHHHHHhcCCCCCCCCccchHHHHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL---NDL---LVQEYVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      ++||+|+++|+++++.|++++ ||||+|+||+++|++..+..   ...   ............|++|+.+|+|+|++++|
T Consensus       156 ~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~  234 (262)
T TIGR03325       156 TAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVF  234 (262)
T ss_pred             HHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheee
Confidence            999999999999999999987 99999999999999865321   110   00011223345789999999999999999


Q ss_pred             HhcCC-CCCccccEEEeCCCccCC
Q 024551          243 LCLPA-ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       243 l~s~~-~~~~~G~~l~vdgG~~~~  265 (266)
                      |+++. +.++||+.|.+|||+.+.
T Consensus       235 l~s~~~~~~~tG~~i~vdgg~~~~  258 (262)
T TIGR03325       235 FATRGDTVPATGAVLNYDGGMGVR  258 (262)
T ss_pred             eecCCCcccccceEEEecCCeeec
Confidence            99974 678999999999998764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-45  Score=314.96  Aligned_cols=242  Identities=26%  Similarity=0.296  Sum_probs=202.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh----------hHHHHHHHHHHhcCCeeEEEeccCCCHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ----------NMINERIQEWESKGFKVTGSVCDLSFGDQRE   83 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~   83 (266)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.          +.++++++++...+.++.++++|++|+++++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   83 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR   83 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            347899999999999999999999999999999999973          4667777777776777889999999999999


Q ss_pred             HHHHHHHhhcCCcccEEEecc-cccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC
Q 024551           84 KLIETVSSVFDGKLNILVNNA-ALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG  158 (266)
Q Consensus        84 ~~~~~~~~~~~~~id~lv~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~  158 (266)
                      ++++++.+.+ +++|++|||| |...    ..++.+.+.++|++.+++|+.++++++++++|+|.+++.|+||++||..+
T Consensus        84 ~~~~~~~~~~-g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~  162 (305)
T PRK08303         84 ALVERIDREQ-GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHc-CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence            9999999998 7899999999 7531    25677788999999999999999999999999998776799999999765


Q ss_pred             CC---CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC-CCCCCCcc
Q 024551          159 AI---SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP-LARSAEPN  234 (266)
Q Consensus       159 ~~---~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  234 (266)
                      ..   +.+....|++||+|+.+|+|+++.|++++|||||+|+||+++|++........ ...+.......| .++..+||
T Consensus       163 ~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~pe  241 (305)
T PRK08303        163 EYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVT-EENWRDALAKEPHFAISETPR  241 (305)
T ss_pred             cccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccC-ccchhhhhccccccccCCCHH
Confidence            43   33456789999999999999999999999999999999999999753211100 001111122446 47788999


Q ss_pred             chHHHHHHHhcCCC-CCccccEEE
Q 024551          235 EISPLVAFLCLPAA-SYITGQVIS  257 (266)
Q Consensus       235 eia~~~~~l~s~~~-~~~~G~~l~  257 (266)
                      |+|++++||+++.. .++||++|.
T Consensus       242 evA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        242 YVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHcCcchhhcCCcEEE
Confidence            99999999999874 699999876

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-44  Score=303.84  Aligned_cols=244  Identities=36%  Similarity=0.448  Sum_probs=209.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +.+++|+++||||++|||++++++|+++|++|+++.++.+..   .+++.+.  ++.++++|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999877654322   2233332  47789999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-CCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-~~~~~~~y~~sK  172 (266)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+.. +.++...|++||
T Consensus        78 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  156 (255)
T PRK06463         78 -GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITK  156 (255)
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHH
Confidence             789999999998776778888999999999999999999999999999877789999999988774 456778999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      +|+++|+++++.|+.++||+||+|+||+++|++........ ............|++|..+|+|+++.++||+++.+.++
T Consensus       157 aa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  236 (255)
T PRK06463        157 AGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYI  236 (255)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCC
Confidence            99999999999999999999999999999999875432221 11122334566789999999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 024551          252 TGQVISIDGGYT  263 (266)
Q Consensus       252 ~G~~l~vdgG~~  263 (266)
                      ||+.+.+|||..
T Consensus       237 ~G~~~~~dgg~~  248 (255)
T PRK06463        237 TGQVIVADGGRI  248 (255)
T ss_pred             CCCEEEECCCee
Confidence            999999999974

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-45  Score=308.00  Aligned_cols=245  Identities=30%  Similarity=0.407  Sum_probs=209.9

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+.+++++|+++||||++|||++++++|+++|++|++++|+++..+         ..++.++++|++|+++++++++++.
T Consensus         2 ~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (266)
T PRK06171          2 QDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEII   72 (266)
T ss_pred             cccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            4446789999999999999999999999999999999999876432         2367889999999999999999999


Q ss_pred             hhcCCcccEEEecccccccc---------CCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC
Q 024551           91 SVFDGKLNILVNNAALVVMK---------RATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS  161 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~  161 (266)
                      +.+ +++|++|||||.....         +..+.+.++|++.+++|+.+++++++++.|+|.+++.|+||++||..+..+
T Consensus        73 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  151 (266)
T PRK06171         73 EKF-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG  151 (266)
T ss_pred             HHc-CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC
Confidence            998 7899999999975432         234678999999999999999999999999998877899999999999999


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCccc-CCCCCCCccc-------hhHHH-HHHHHh--cCCCCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVN-TQISPPDLND-------LLVQE-YVKLIA--KTPLARS  230 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~-t~~~~~~~~~-------~~~~~-~~~~~~--~~~~~~~  230 (266)
                      .++...|+++|+++++|+++++.|++++|||||+|+||+++ |++.......       ....+ ......  ..|++|.
T Consensus       152 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  231 (266)
T PRK06171        152 SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRS  231 (266)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCC
Confidence            99999999999999999999999999999999999999997 6654322111       00111 122222  5789999


Q ss_pred             CCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          231 AEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      .+|+|+|+++.||+++.++++||+.|.+|||++.+
T Consensus       232 ~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~~~~  266 (266)
T PRK06171        232 GKLSEVADLVCYLLSDRASYITGVTTNIAGGKTRG  266 (266)
T ss_pred             CCHHHhhhheeeeeccccccceeeEEEecCcccCC
Confidence            99999999999999999999999999999998764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-45  Score=313.56  Aligned_cols=247  Identities=25%  Similarity=0.268  Sum_probs=197.1

Q ss_pred             cccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHH----------hcCC-----eeEEEecc
Q 024551           13 KWSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE----------SKGF-----KVTGSVCD   75 (266)
Q Consensus        13 ~~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~----------~~~~-----~~~~~~~D   75 (266)
                      +.+++||+++|||++  +|||+++|++|+++|++|++.++.+ .++...+...          ..+.     ++..+.+|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            356799999999995  9999999999999999999977542 1111111100          0111     11112334


Q ss_pred             CCCH------------------HHHHHHHHHHHhhcCCcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHH
Q 024551           76 LSFG------------------DQREKLIETVSSVFDGKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLC  135 (266)
Q Consensus        76 ~~~~------------------~~i~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~  135 (266)
                      +++.                  ++++++++++.+.+ +++|+||||||...  ..++.+.+.++|++.+++|+.++++++
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            3333                  36899999999998 78999999999753  467889999999999999999999999


Q ss_pred             HHHHHHHHhcCCCeEEEEecCCCCCCCCCch-hhhhhHHHHHHHHHHHHHHhcc-CCcEEEEEecCcccCCCCCCCccch
Q 024551          136 QLAHPLLKASGNASIVFMSSVAGAISIPRLS-AYAASKGAINQLTKNLACEWAT-DSIRVNAVSPWAVNTQISPPDLNDL  213 (266)
Q Consensus       136 ~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~-~y~~sK~al~~~~~~~a~el~~-~gi~v~~i~PG~v~t~~~~~~~~~~  213 (266)
                      ++++|+|++  .|+||+++|..+..+.|++. .|++||+|+++|+|+++.|+++ +|||||+|+||+++|++........
T Consensus       161 ~a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~  238 (299)
T PRK06300        161 SHFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIE  238 (299)
T ss_pred             HHHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccH
Confidence            999999975  37999999999988888875 8999999999999999999987 5999999999999999864321111


Q ss_pred             hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          214 LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                        ..........|++|..+|+|++++++||+++.++++||+.+.+|||+++-
T Consensus       239 --~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  288 (299)
T PRK06300        239 --RMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVM  288 (299)
T ss_pred             --HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccee
Confidence              11123344578899999999999999999999999999999999998763

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-44  Score=307.16  Aligned_cols=234  Identities=25%  Similarity=0.369  Sum_probs=200.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+.+++..+++...+.++.++++|++|+++++++++++ +.+ +++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~i   77 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GPV   77 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CCC
Confidence            689999998 699999999996 8999999999998888888888766678999999999999999999988 456 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC---------------
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI---------------  162 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~---------------  162 (266)
                      |++|||||+..       ..++|++.+++|+.+++++++.+.|.|+++  |++|+++|..+..+.               
T Consensus        78 d~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  148 (275)
T PRK06940         78 TGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPT  148 (275)
T ss_pred             CEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhcccccccc
Confidence            99999999752       236799999999999999999999999754  688999998876542               


Q ss_pred             ---------------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC
Q 024551          163 ---------------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL  227 (266)
Q Consensus       163 ---------------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (266)
                                     +++..|++||+|+++++|+++.|++++|||||+|+||+++|++....................|+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~  228 (275)
T PRK06940        149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA  228 (275)
T ss_pred             ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc
Confidence                           24678999999999999999999999999999999999999986543222111112334456789


Q ss_pred             CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          228 ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       228 ~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +|+.+|||+|++++||+++.++++||+.|.+|||++.
T Consensus       229 ~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        229 GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence            9999999999999999999999999999999999764

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-44  Score=300.56  Aligned_cols=244  Identities=27%  Similarity=0.381  Sum_probs=214.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ||+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|+++++++++++.+.+ +++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence            6899999999999999999999999999999999998888888887666789999999999999999999999998 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      |++|||+|.....++.+.+.++|++.+++|+.++++++++++|.|.++ ..|+||++||..+..+.+....|+++|++++
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~  159 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL  159 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence            999999998666677888999999999999999999999999998764 3689999999999888888899999999999


Q ss_pred             HHHHHHHHHhcc-CCcEEEEEecCcccCCCCC-CCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          177 QLTKNLACEWAT-DSIRVNAVSPWAVNTQISP-PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       177 ~~~~~~a~el~~-~gi~v~~i~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +|+++++.|+.+ +||+|++|+||+++|+... .....+  ..........|++|+.+|+|+++++.||+++...++||+
T Consensus       160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  237 (252)
T PRK07677        160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESE--EAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGT  237 (252)
T ss_pred             HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCH--HHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCC
Confidence            999999999975 6999999999999964322 211111  112334456788999999999999999999988999999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      .+.+|||+++
T Consensus       238 ~~~~~gg~~~  247 (252)
T PRK07677        238 CITMDGGQWL  247 (252)
T ss_pred             EEEECCCeec
Confidence            9999999875

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-44  Score=300.16  Aligned_cols=239  Identities=33%  Similarity=0.459  Sum_probs=212.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.        ...+.++.++++|++|+++++++++.+.+.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   73 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH   73 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45889999999999999999999999999999999998764        1234578899999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+.|.|.++ +.|+||++||..+..+.+.+..|+++|
T Consensus        74 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  152 (252)
T PRK07856         74 -GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK  152 (252)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence             789999999998777777888999999999999999999999999999875 458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++|++.++.|++++ |+|++|+||+++|++........  ..........|.+|..+|+|+++.++||+++..+++|
T Consensus       153 ~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~  229 (252)
T PRK07856        153 AGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDA--EGIAAVAATVPLGRLATPADIAWACLFLASDLASYVS  229 (252)
T ss_pred             HHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCH--HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence            99999999999999988 99999999999999865432221  2223345567889999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.|.+|||+..
T Consensus       230 G~~i~vdgg~~~  241 (252)
T PRK07856        230 GANLEVHGGGER  241 (252)
T ss_pred             CCEEEECCCcch
Confidence            999999999865

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-43  Score=299.48  Aligned_cols=245  Identities=27%  Similarity=0.375  Sum_probs=210.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|++ ..++..+++...+.++.++++|++|+++++++++++.+.+ 
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF-   82 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc-
Confidence            37899999999999999999999999999999999985 3556667776667788899999999999999999999988 


Q ss_pred             CcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|++|||||.. ...++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +....|++||+
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~  160 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKG  160 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHH
Confidence            7899999999965 34677888999999999999999999999999999887778999999987642  34678999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC------cc--ch-hHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD------LN--DL-LVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~------~~--~~-~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      ++++|+++++.|++++||+|++|+||+++|++....      ..  .. ............|++|..+|+|+|++++||+
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  240 (260)
T PRK12823        161 GVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLA  240 (260)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999863210      00  01 1112233445678999999999999999999


Q ss_pred             cCCCCCccccEEEeCCCcc
Q 024551          245 LPAASYITGQVISIDGGYT  263 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++...+++|+.+.+|||..
T Consensus       241 s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        241 SDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             CcccccccCcEEeecCCCC
Confidence            9989999999999999964

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-43  Score=298.64  Aligned_cols=244  Identities=35%  Similarity=0.506  Sum_probs=216.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||+++||++++++|+++|++|++++|+.+. .+..+++.  +.++.++++|++++++++++++++.+.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999998764 33333332  3467789999999999999999999988


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||+|.....++.+.+.++|++.+++|+.+++++++.+.|.|++++.++||++||..+..+.+....|+++|+
T Consensus        88 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         88 -GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence             7899999999987777777889999999999999999999999999998877899999999999899999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      ++++++++++.|++++||+|++|+||+++|++....+....   ........|.+|+.+|+|+++.++||+++.+.++||
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  243 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEK---GERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITG  243 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhH---HHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence            99999999999999999999999999999998664432211   123345678899999999999999999999999999


Q ss_pred             cEEEeCCCccC
Q 024551          254 QVISIDGGYTA  264 (266)
Q Consensus       254 ~~l~vdgG~~~  264 (266)
                      +.+.+|||+++
T Consensus       244 ~~i~~dgg~~~  254 (255)
T PRK06841        244 ENLVIDGGYTI  254 (255)
T ss_pred             CEEEECCCccC
Confidence            99999999875

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.3e-44  Score=328.76  Aligned_cols=244  Identities=30%  Similarity=0.507  Sum_probs=216.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ....||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.++..+++|++|+++++++++++.+.+
T Consensus       265 ~~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        265 LAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            3568999999999999999999999999999999999998888777655   4567789999999999999999999998


Q ss_pred             CCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||... ..++.+.+.++|++++++|+.+++++++.++|+|+  +.|+||++||.++..+.++...|+++|
T Consensus       342 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asK  418 (520)
T PRK06484        342 -GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLALPPRNAYCASK  418 (520)
T ss_pred             -CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCCCCCchhHHHH
Confidence             78999999999864 35677889999999999999999999999999993  358999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++|+|+++.|+.++|||||+|+||+++|++....... ............|++|..+|+|+|+.++||+++...++|
T Consensus       419 aal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~  497 (520)
T PRK06484        419 AAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-GRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVN  497 (520)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-cHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            9999999999999999999999999999999986543211 111223445567899999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.+.+|||+..
T Consensus       498 G~~i~vdgg~~~  509 (520)
T PRK06484        498 GATLTVDGGWTA  509 (520)
T ss_pred             CcEEEECCCccC
Confidence            999999999864

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.4e-44  Score=299.66  Aligned_cols=199  Identities=31%  Similarity=0.400  Sum_probs=184.9

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-C-eeEEEeccCCCHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-F-KVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~-~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .+..++||+|+|||||+|||+++|++|+++|++++++.|...+++.+++++++.+ . ++++++||++|.++++++++++
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999999989888763 3 4999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      ...| |++|+||||||+...+..++.+.+++.+.|++|++|+++++++++|.|++++.|+||+++|.+|+.+.|....|+
T Consensus        86 ~~~f-g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~  164 (282)
T KOG1205|consen   86 IRHF-GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYS  164 (282)
T ss_pred             HHhc-CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccc
Confidence            9999 899999999999887778888999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCC--cEEEEEecCcccCCCCCCCccc
Q 024551          170 ASKGAINQLTKNLACEWATDS--IRVNAVSPWAVNTQISPPDLND  212 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~g--i~v~~i~PG~v~t~~~~~~~~~  212 (266)
                      +||+|+.+|+.+++.|+.+.+  |++ .|+||+|+|++.......
T Consensus       165 ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~  208 (282)
T KOG1205|consen  165 ASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLG  208 (282)
T ss_pred             hHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhcc
Confidence            999999999999999999987  666 999999999987765443

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=3e-43  Score=296.61  Aligned_cols=243  Identities=30%  Similarity=0.416  Sum_probs=217.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEec-CChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +|+++||||++|||++++++|+++|++|+++. |+.+.++++.+++...+.+++++++|++|+++++++++++.+.+ ++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-GR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            68999999999999999999999999998875 56677778888887778889999999999999999999999998 78


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      +|++|||+|.....++.+.+.++|++.+++|+.+++++++++.++|.+++ .|+||++||..+..+.++...|+++|+++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  160 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL  160 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence            99999999987767778889999999999999999999999999997653 58999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccE
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV  255 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~  255 (266)
                      ++++++++.++..+||+|++|+||+++|++..... ..   .........|..|..+|+|+++.++||+++...+++|+.
T Consensus       161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  236 (256)
T PRK12743        161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD-SD---VKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQS  236 (256)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC-hH---HHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcE
Confidence            99999999999999999999999999999865421 11   112334567888999999999999999999999999999


Q ss_pred             EEeCCCccCC
Q 024551          256 ISIDGGYTAG  265 (266)
Q Consensus       256 l~vdgG~~~~  265 (266)
                      +.+|||+++.
T Consensus       237 ~~~dgg~~~~  246 (256)
T PRK12743        237 LIVDGGFMLA  246 (256)
T ss_pred             EEECCCcccc
Confidence            9999998765

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-43  Score=297.45  Aligned_cols=247  Identities=27%  Similarity=0.353  Sum_probs=217.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |.+++|+++||||+++||++++++|+++|++|++++|+.+.++++.+++   +.++.++++|++|+++++++++++.+.+
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERF   78 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999998887776655   3468889999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.|.+++ .++||++||..+..+.++...|++||
T Consensus        79 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  157 (257)
T PRK07067         79 -GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATK  157 (257)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhH
Confidence             7899999999988777788889999999999999999999999999997653 47999999998888999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc------c-hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN------D-LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ++++.|+++++.|+.++||+|++|+||+++|++......      . .............|++|+.+|+|+|++++||++
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  237 (257)
T PRK07067        158 AAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLAS  237 (257)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999987543210      0 011112234456789999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccC
Q 024551          246 PAASYITGQVISIDGGYTA  264 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~  264 (266)
                      +...+++|+.+.+|||..+
T Consensus       238 ~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        238 ADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             cccccccCcEEeecCCEeC
Confidence            9999999999999999765

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-43  Score=298.86  Aligned_cols=244  Identities=31%  Similarity=0.372  Sum_probs=209.3

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +...+++||+++||||++|||++++++|+++|++|++++|+++..         ...++.++++|++|+++++++++++.
T Consensus         2 ~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (260)
T PRK06523          2 SFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVL   72 (260)
T ss_pred             CcCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHH
Confidence            344568899999999999999999999999999999999986531         23468889999999999999999999


Q ss_pred             hhcCCcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-Cchh
Q 024551           91 SVFDGKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-RLSA  167 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-~~~~  167 (266)
                      +.+ +++|++|||||...  ..++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.+ +...
T Consensus        73 ~~~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~  151 (260)
T PRK06523         73 ERL-GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTA  151 (260)
T ss_pred             HHc-CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcch
Confidence            988 78999999999753  4567778999999999999999999999999999988778999999999888765 7899


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc----------hhHHHHHHHHhcCCCCCCCCccchH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND----------LLVQEYVKLIAKTPLARSAEPNEIS  237 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~eia  237 (266)
                      |+++|+++++|++.++.++.++||+|++|+||+++|++.......          .............|++|..+|+|++
T Consensus       152 Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va  231 (260)
T PRK06523        152 YAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVA  231 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHH
Confidence            999999999999999999999999999999999999976432110          0001111112447889999999999


Q ss_pred             HHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          238 PLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +.++||+++..+++||+.+.+|||+..
T Consensus       232 ~~~~~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        232 ELIAFLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HHHHHHhCcccccccCceEEecCCccC
Confidence            999999999999999999999999765

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-43  Score=297.55  Aligned_cols=250  Identities=27%  Similarity=0.452  Sum_probs=219.1

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .++.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999988888777776666788999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|+++ .|+||++||..+..+.+.+..|+++
T Consensus        83 ~~-~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~as  160 (264)
T PRK07576         83 EF-GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAA  160 (264)
T ss_pred             Hc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHH
Confidence            88 789999999997766778888999999999999999999999999999765 4899999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCccc-CCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVN-TQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      |+++++|+++++.|+..+||+|++|+||+++ |+......+.....  .......|++|..+|+|+|+.++||+++...+
T Consensus       161 K~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  238 (264)
T PRK07576        161 KAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQ--AAVAQSVPLKRNGTKQDIANAALFLASDMASY  238 (264)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHH--HHHHhcCCCCCCCCHHHHHHHHHHHcChhhcC
Confidence            9999999999999999999999999999997 55433322221111  22334468889999999999999999988899


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      ++|+.+.+|||+.++
T Consensus       239 ~~G~~~~~~gg~~~~  253 (264)
T PRK07576        239 ITGVVLPVDGGWSLG  253 (264)
T ss_pred             ccCCEEEECCCcccC
Confidence            999999999998764

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-43  Score=293.85  Aligned_cols=249  Identities=27%  Similarity=0.426  Sum_probs=222.5

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +...++++|+++||||+++||++++++|+++|++|++++|+++.++++.+++...+.++.++.+|++++++++++++++.
T Consensus         2 ~~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          2 GRSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             CcccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34456899999999999999999999999999999999999999988888887666788999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--------CCeEEEEecCCCCCCC
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--------NASIVFMSSVAGAISI  162 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--------~g~iv~vss~~~~~~~  162 (266)
                      +.+ +++|++|||+|.....++.+.+.++|+.++++|+.+++.++++++|.|.++.        .++||+++|..+..+.
T Consensus        82 ~~~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  160 (258)
T PRK06949         82 TEA-GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL  160 (258)
T ss_pred             Hhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC
Confidence            888 7899999999987777777888999999999999999999999999997653        4799999999988888


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHH
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      +....|+++|++++.+++.++.++.++||+|++|+||+++|++........   .........|.++...|+|+++.+.|
T Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~  237 (258)
T PRK06949        161 PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETE---QGQKLVSMLPRKRVGKPEDLDGLLLL  237 (258)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChH---HHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999866433221   12344556788999999999999999


Q ss_pred             HhcCCCCCccccEEEeCCCcc
Q 024551          243 LCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      |+++.+.+++|+.|.+|||+.
T Consensus       238 l~~~~~~~~~G~~i~~dgg~~  258 (258)
T PRK06949        238 LAADESQFINGAIISADDGFG  258 (258)
T ss_pred             HhChhhcCCCCcEEEeCCCCC
Confidence            999999999999999999973

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.1e-42  Score=291.14  Aligned_cols=245  Identities=27%  Similarity=0.383  Sum_probs=217.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++|+++||||++|||++++++|+++|++|++. .++.+..++..+++...+.++..+.+|++|.++++++++++.+.+ 
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV-   79 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            468999999999999999999999999998874 556666667777776667788889999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|+++|++
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a  159 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG  159 (246)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHH
Confidence            78999999999877667888899999999999999999999999999988777899999999988888999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      ++.|+++++.++..+||++++|+||+++|++..... ..   .........|..+..+++|+++.+.||+++...+++|+
T Consensus       160 ~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~  235 (246)
T PRK12938        160 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-PD---VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGA  235 (246)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-hH---HHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCc
Confidence            999999999999999999999999999999865432 11   11233445688889999999999999999989999999


Q ss_pred             EEEeCCCccCC
Q 024551          255 VISIDGGYTAG  265 (266)
Q Consensus       255 ~l~vdgG~~~~  265 (266)
                      .+.+|||++++
T Consensus       236 ~~~~~~g~~~~  246 (246)
T PRK12938        236 DFSLNGGLHMG  246 (246)
T ss_pred             EEEECCcccCc
Confidence            99999998764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-42  Score=292.26  Aligned_cols=245  Identities=28%  Similarity=0.364  Sum_probs=209.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |.+++|+++||||++|||+++++.|+++|++|++..+ +++..+.+.+++   +.++.++++|++|+++++++++++.+.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH   77 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578899999999999999999999999999988654 555555554443   357889999999999999999999988


Q ss_pred             cCCcccEEEecccccc------ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCch
Q 024551           93 FDGKLNILVNNAALVV------MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  166 (266)
                      +++++|++|||||...      ..++.+.+.++|++.+++|+.+++++++.++|+|.+++.|+||+++|..+..+.+++.
T Consensus        78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  157 (253)
T PRK08642         78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYH  157 (253)
T ss_pred             hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCcc
Confidence            8334999999998642      2457788999999999999999999999999999877779999999988777777788


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .|+++|+++++|+++++++++++|||||+|+||+++|+.........   .........|++++.+|+|+++.+.||+++
T Consensus       158 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  234 (253)
T PRK08642        158 DYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDE---VFDLIAATTPLRKVTTPQEFADAVLFFASP  234 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHH---HHHHHHhcCCcCCCCCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999999998654332221   123344567889999999999999999999


Q ss_pred             CCCCccccEEEeCCCccC
Q 024551          247 AASYITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~  264 (266)
                      ...+++|+.|.+|||+..
T Consensus       235 ~~~~~~G~~~~vdgg~~~  252 (253)
T PRK08642        235 WARAVTGQNLVVDGGLVM  252 (253)
T ss_pred             hhcCccCCEEEeCCCeec
Confidence            999999999999999764

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.4e-42  Score=292.33  Aligned_cols=247  Identities=30%  Similarity=0.368  Sum_probs=214.6

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ++.+.++++||+++||||+++||++++++|+++|++|++++|+.+..++..+++   +.++.++++|+++++++++++++
T Consensus         1 ~~~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~   77 (255)
T PRK05717          1 MSEPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAE   77 (255)
T ss_pred             CCCCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHH
Confidence            456778899999999999999999999999999999999999887766655443   45788999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccc--cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCch
Q 024551           89 VSSVFDGKLNILVNNAALVVM--KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  166 (266)
                      +.+.+ +++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++.|+|.++ .|+||++||..+..+.+...
T Consensus        78 ~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~  155 (255)
T PRK05717         78 VLGQF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTE  155 (255)
T ss_pred             HHHHh-CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCc
Confidence            99988 789999999998643  467778999999999999999999999999999765 48999999999999989999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .|+++|+++++++++++.++... |+|++|+||+++|++........ ..  .......|.+|..+|+|+++.+.|++++
T Consensus       156 ~Y~~sKaa~~~~~~~la~~~~~~-i~v~~i~Pg~i~t~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~va~~~~~l~~~  231 (255)
T PRK05717        156 AYAASKGGLLALTHALAISLGPE-IRVNAVSPGWIDARDPSQRRAEP-LS--EADHAQHPAGRVGTVEDVAAMVAWLLSR  231 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCC-CEEEEEecccCcCCccccccchH-HH--HHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999875 99999999999998754322111 11  1223356889999999999999999998


Q ss_pred             CCCCccccEEEeCCCccC
Q 024551          247 AASYITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~  264 (266)
                      ...+++|+.+.+|||+++
T Consensus       232 ~~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        232 QAGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             hhcCccCcEEEECCCceE
Confidence            889999999999999764

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-43  Score=293.65  Aligned_cols=249  Identities=29%  Similarity=0.375  Sum_probs=219.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-   80 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-
Confidence            4678999999999999999999999999999999999998888888887767788999999999999999999999998 


Q ss_pred             CcccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++.+.|.+.+ ++||++||..+..+.+++..|+++|+
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~~~Y~~sK~  159 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKG  159 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCcchhHHHHH
Confidence            789999999997643 5677889999999999999999999999999997764 79999999999989999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-------hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-------LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      +++.++++++.++.++||++++++||++.|++.......       .............+++++.+|+|++++++|++++
T Consensus       160 a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~  239 (258)
T PRK07890        160 ALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASD  239 (258)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCH
Confidence            999999999999999999999999999999875432110       0111122334557888999999999999999998


Q ss_pred             CCCCccccEEEeCCCccCC
Q 024551          247 AASYITGQVISIDGGYTAG  265 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~~  265 (266)
                      ...+++|+.+.+|||++++
T Consensus       240 ~~~~~~G~~i~~~gg~~~~  258 (258)
T PRK07890        240 LARAITGQTLDVNCGEYHH  258 (258)
T ss_pred             hhhCccCcEEEeCCccccC
Confidence            8889999999999998764

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-42  Score=295.48  Aligned_cols=248  Identities=33%  Similarity=0.488  Sum_probs=218.2

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh-HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ..++++|++|||||+++||++++++|+++|++|++++|+.+ ..+...+.+...+.++.++.+|++|.++++++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999853 45566666666667889999999999999999999999


Q ss_pred             hcCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           92 VFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      .+ +++|++|||||... ..++.+.+.++|++.+++|+.+++++++++++.|++  .++||++||..+..+.+....|++
T Consensus       121 ~~-~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  197 (290)
T PRK06701        121 EL-GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSA  197 (290)
T ss_pred             Hc-CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHH
Confidence            88 78999999999764 356778899999999999999999999999999965  379999999999998899999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      +|++++.|+++++.++.++||+|++|+||+++|++.........   ........+++++.+|+|+|++++||+++...+
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~  274 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEK---VSQFGSNTPMQRPGQPEELAPAYVFLASPDSSY  274 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHH---HHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999999999999999999998765433222   123345678899999999999999999999999


Q ss_pred             ccccEEEeCCCccCCC
Q 024551          251 ITGQVISIDGGYTAGN  266 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~~  266 (266)
                      ++|+.+.+|||...++
T Consensus       275 ~~G~~i~idgg~~~~~  290 (290)
T PRK06701        275 ITGQMLHVNGGVIVNG  290 (290)
T ss_pred             ccCcEEEeCCCcccCC
Confidence            9999999999988764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.6e-42  Score=288.66  Aligned_cols=232  Identities=24%  Similarity=0.318  Sum_probs=201.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|++|||||++|||++++++|+++|++|++++|+++..   .+++.+.+  +.++.+|++|+++++++++++.+.+ +++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   75 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---IDGLRQAG--AQCIQADFSTNAGIMAFIDELKQHT-DGL   75 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhC-CCc
Confidence            58999999999999999999999999999999987643   23343333  6788999999999999999999988 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--CCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--NASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      |++|||||........+.+.++|++.+++|+.+++.+++.++|.|++.+  .|+||++||..+..+.+.+..|++||+++
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal  155 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL  155 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence            9999999986555566778999999999999999999999999998765  68999999999888888999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccE
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV  255 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~  255 (266)
                      ++|+++++.|++++ ||||+|+||++.|+...    ..  ..........|+.|...|+|+++.+.||++  ..++||+.
T Consensus       156 ~~l~~~~a~e~~~~-irvn~v~Pg~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~  226 (236)
T PRK06483        156 DNMTLSFAAKLAPE-VKVNSIAPALILFNEGD----DA--AYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRS  226 (236)
T ss_pred             HHHHHHHHHHHCCC-cEEEEEccCceecCCCC----CH--HHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCcE
Confidence            99999999999884 99999999999875421    11  112334456788999999999999999996  68999999


Q ss_pred             EEeCCCccC
Q 024551          256 ISIDGGYTA  264 (266)
Q Consensus       256 l~vdgG~~~  264 (266)
                      |.+|||+++
T Consensus       227 i~vdgg~~~  235 (236)
T PRK06483        227 LPVDGGRHL  235 (236)
T ss_pred             EEeCccccc
Confidence            999999875

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-42  Score=290.30  Aligned_cols=246  Identities=23%  Similarity=0.297  Sum_probs=215.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +|+++||||+++||++++++|+++|++|++++|+.+.+++..+++....  .+++++.+|++|++++.++++++.+.+ +
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-G   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            6899999999999999999999999999999999988888887776532  478999999999999999999999998 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      ++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.+....|++||++
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  160 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG  160 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence            899999999988777888899999999999999999999999999998776 6899999999888888888999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcc-cCCCCCCCccch-------hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAV-NTQISPPDLNDL-------LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v-~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      +++++++++.|++++||+|++|+||++ .|++.....+..       ..+.........|++|+.+|+|++++++||+++
T Consensus       161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~  240 (259)
T PRK12384        161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP  240 (259)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence            999999999999999999999999975 666654322210       111112334567899999999999999999998


Q ss_pred             CCCCccccEEEeCCCccC
Q 024551          247 AASYITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~  264 (266)
                      .+.+++|+++.+|||..+
T Consensus       241 ~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        241 KASYCTGQSINVTGGQVM  258 (259)
T ss_pred             ccccccCceEEEcCCEEe
Confidence            889999999999999864

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-42  Score=289.42  Aligned_cols=249  Identities=28%  Similarity=0.423  Sum_probs=221.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35889999999999999999999999999999999999998888888887667788899999999999999999999988


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh-cCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|++|||||......+.+.+.++|++++++|+.+++.+++++.|.|.+ .+.|+||++||..+..+.++...|+++|
T Consensus        86 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  164 (263)
T PRK07814         86 -GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK  164 (263)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence             78999999999876677888899999999999999999999999999987 4578999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++++++++.|+.+ +|+|++|+||+++|++..........  ........+..+..+|+|+|+.++|++++...+++
T Consensus       165 ~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  241 (263)
T PRK07814        165 AALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDEL--RAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLT  241 (263)
T ss_pred             HHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHH--HHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcC
Confidence            9999999999999987 59999999999999876432111111  12334456788889999999999999999889999


Q ss_pred             ccEEEeCCCccCCC
Q 024551          253 GQVISIDGGYTAGN  266 (266)
Q Consensus       253 G~~l~vdgG~~~~~  266 (266)
                      |+.+.+|||...+|
T Consensus       242 g~~~~~~~~~~~~~  255 (263)
T PRK07814        242 GKTLEVDGGLTFPN  255 (263)
T ss_pred             CCEEEECCCccCCC
Confidence            99999999988765

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-42  Score=287.04  Aligned_cols=247  Identities=32%  Similarity=0.448  Sum_probs=223.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||+++||++++++|+++|++|++++|+++.+++..+++++.+.++.++++|++|+++++++++++.+.+ 
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   82 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL-   82 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            3679999999999999999999999999999999999998888888887767789999999999999999999999988 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||+|......+.+.+.++|++.++.|+.+++++++.+.|+|.+++.|++|++||..+..+.+....|+++|++
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~  162 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGA  162 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHH
Confidence            78999999999887777888899999999999999999999999999988778999999999988888889999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      ++++++.++.++..++|+++.|+||+++|++.........   ........|..++.+|+|+++.+++++++...+++|+
T Consensus       163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (250)
T PRK12939        163 VIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADER---HAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQ  239 (250)
T ss_pred             HHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHH---HHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCc
Confidence            9999999999999999999999999999998765432111   1233445788899999999999999999888899999


Q ss_pred             EEEeCCCccCC
Q 024551          255 VISIDGGYTAG  265 (266)
Q Consensus       255 ~l~vdgG~~~~  265 (266)
                      .|.+|||.+++
T Consensus       240 ~i~~~gg~~~~  250 (250)
T PRK12939        240 LLPVNGGFVMN  250 (250)
T ss_pred             EEEECCCcccC
Confidence            99999999874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=2.7e-42  Score=289.73  Aligned_cols=242  Identities=28%  Similarity=0.362  Sum_probs=214.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||+++||++++++|+++|++|++++|+.         +...+.++.++++|++|+++++++++++.+.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            568999999999999999999999999999999999986         22235678899999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||+|....+++.+.+.++|++.+++|+.+++++++.+.|+|++++.|+||++||..+..+.++...|+.+|+
T Consensus        75 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~  153 (252)
T PRK08220         75 -GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKA  153 (252)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHH
Confidence             7899999999988777888889999999999999999999999999998887899999999998888888999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhH------HHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV------QEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ++++|+++++.|+.++||+|+.+.||+++|++..........      ..........|.+++.+|+|+|++++||+++.
T Consensus       154 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        154 ALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcch
Confidence            999999999999999999999999999999986543221110      01123345578899999999999999999999


Q ss_pred             CCCccccEEEeCCCccCC
Q 024551          248 ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~~  265 (266)
                      ..+++|+.+.+|||.+++
T Consensus       234 ~~~~~g~~i~~~gg~~~~  251 (252)
T PRK08220        234 ASHITLQDIVVDGGATLG  251 (252)
T ss_pred             hcCccCcEEEECCCeecC
Confidence            999999999999999886

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-42  Score=291.19  Aligned_cols=248  Identities=31%  Similarity=0.339  Sum_probs=214.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||++|||||++|||++++++|+++|++|++++|+++.. +..+++.+.+.++.++++|++++++++++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999999999999998876 6777777767789999999999999999999999988


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||+|......++..+ ++|++.+++|+.+++.+++.++|.|++. .++||++||..+..+.+.+..|++||+
T Consensus        82 -~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~  158 (258)
T PRK08628         82 -GRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKG  158 (258)
T ss_pred             -CCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHH
Confidence             7899999999976555555544 9999999999999999999999999765 489999999999988889999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--hhHHHHHHHHhcCCCC-CCCCccchHHHHHHHhcCCCCC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--LLVQEYVKLIAKTPLA-RSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      +++++++.++.|+.++||+|+.|+||.++|++.......  .............|.. +..+|+|+|+.++|++++...+
T Consensus       159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  238 (258)
T PRK08628        159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSH  238 (258)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhcc
Confidence            999999999999999999999999999999875432111  1111112233345653 7899999999999999999999


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      ++|+.+.+|||++..
T Consensus       239 ~~g~~~~~~gg~~~~  253 (258)
T PRK08628        239 TTGQWLFVDGGYVHL  253 (258)
T ss_pred             ccCceEEecCCcccc
Confidence            999999999998764

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.2e-42  Score=286.80  Aligned_cols=249  Identities=33%  Similarity=0.458  Sum_probs=221.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++++|+++||||+++||++++++|+++|++|++++|+++..++..+.+.+ +.++.++++|++|+++++++++++.+.+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999999888888777765 5678999999999999999999998888


Q ss_pred             CCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.++++|.+++.++||++||..+..+.++...|+.+|
T Consensus        80 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (251)
T PRK07231         80 -GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASK  158 (251)
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence             78999999999754 4457788999999999999999999999999999888789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.+++.++.++.++||++++++||+++|++....................|.+++.+|+|+|+++++|+++...+++
T Consensus       159 ~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  238 (251)
T PRK07231        159 GAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWIT  238 (251)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence            99999999999999999999999999999999876544322122223445567888999999999999999998889999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.+.+|||..+
T Consensus       239 g~~~~~~gg~~~  250 (251)
T PRK07231        239 GVTLVVDGGRCV  250 (251)
T ss_pred             CCeEEECCCccC
Confidence            999999999865

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.8e-42  Score=286.04  Aligned_cols=246  Identities=33%  Similarity=0.430  Sum_probs=218.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEE-ecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++|+++||||+++||++++++|+++|++|++ ..|+.+..+++.+++++.+.++.++.+|++|++++.++++++.+.+ 
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-   80 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            46799999999999999999999999999876 5888888888888888777889999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||+|.....++.+.+.++|+..+++|+.+++.+++++.|+|++++.|+||++||..+..+.+....|+++|++
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  160 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAA  160 (250)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHH
Confidence            78999999999877778888999999999999999999999999999988888999999999888888889999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++|+++++.++.+.||++++|+||+++|++........  ..........|.++..+++|+|+.+++++++...+++|+
T Consensus       161 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~  238 (250)
T PRK08063        161 LEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNRE--ELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQ  238 (250)
T ss_pred             HHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCch--HHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCC
Confidence            999999999999999999999999999998765422111  111233445677888999999999999999888899999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      .+.+|||.++
T Consensus       239 ~~~~~gg~~~  248 (250)
T PRK08063        239 TIIVDGGRSL  248 (250)
T ss_pred             EEEECCCeee
Confidence            9999999875

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-42  Score=286.64  Aligned_cols=243  Identities=33%  Similarity=0.440  Sum_probs=211.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|.+++.++++.+.+.+ 
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF-   78 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            467999999999999999999999999999999999987776665554   5578899999999999999999999988 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|++  .+++|+++|..+..+.+....|+.+|++
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a  156 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAA  156 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHH
Confidence            78999999999877677778899999999999999999999999999965  3689999998888888999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc-cchh-HHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL-NDLL-VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++++++.|+.++||++++|+||+++|++..... .... ...........|+++..+|+|++++++||+++...|++
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  236 (249)
T PRK06500        157 LLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIV  236 (249)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence            999999999999999999999999999999754321 1111 11112334456888999999999999999998889999


Q ss_pred             ccEEEeCCCcc
Q 024551          253 GQVISIDGGYT  263 (266)
Q Consensus       253 G~~l~vdgG~~  263 (266)
                      |+.|.+|||.+
T Consensus       237 g~~i~~~gg~~  247 (249)
T PRK06500        237 GSEIIVDGGMS  247 (249)
T ss_pred             CCeEEECCCcc
Confidence            99999999965

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=7.9e-42  Score=287.27  Aligned_cols=245  Identities=33%  Similarity=0.421  Sum_probs=219.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||+++||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|++++.++++++.+.+ +++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999988888888888777789999999999999999999999998 7899


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      ++|||+|....+++.+.+.++|++.+++|+.+++++++.+++.|++++ .++||++||..+..+.+.+..|+.+|+++++
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            999999988777888899999999999999999999999999998765 4799999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-------HHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-------VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      |++.++.++.+.||+|+.++||+++|++.........       ...........+.+++.+|+|++++++||+++...+
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  239 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY  239 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCC
Confidence            9999999999999999999999999998654321110       111233445678899999999999999999999999


Q ss_pred             ccccEEEeCCCccC
Q 024551          251 ITGQVISIDGGYTA  264 (266)
Q Consensus       251 ~~G~~l~vdgG~~~  264 (266)
                      ++|+++.+|||..+
T Consensus       240 ~~g~~~~~d~g~~~  253 (254)
T TIGR02415       240 ITGQSILVDGGMVY  253 (254)
T ss_pred             ccCcEEEecCCccC
Confidence            99999999999764

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=9.5e-42  Score=284.38  Aligned_cols=236  Identities=27%  Similarity=0.378  Sum_probs=210.4

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCC-hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      ++||||++|||+++|++|+++|++|++++|+ .+.+++..+++++.+.++.++++|++|+++++++++++.+.+ +++|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            5899999999999999999999999988764 566777788887777789999999999999999999998888 78999


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHH-HHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH-PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      +|||+|.....++.+.+.++|++++++|+.+++++++.++ |.+++++.++||++||..+..+.++...|+++|++++++
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~  159 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA  159 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            9999998877777788999999999999999999999875 556656678999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEe
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISI  258 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~v  258 (266)
                      +++++.|+.++||+|++++||+++|++..+.. +    .........|++|..+|+|+++.++||+++.+.+++|+.+.+
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~----~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~  234 (239)
T TIGR01831       160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVE-H----DLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISV  234 (239)
T ss_pred             HHHHHHHHhHhCeEEEEEEEccCccccchhhh-H----HHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEe
Confidence            99999999999999999999999999876431 1    123344568999999999999999999999999999999999


Q ss_pred             CCCc
Q 024551          259 DGGY  262 (266)
Q Consensus       259 dgG~  262 (266)
                      |||+
T Consensus       235 ~gg~  238 (239)
T TIGR01831       235 NGGM  238 (239)
T ss_pred             cCCc
Confidence            9996

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-41  Score=286.86  Aligned_cols=242  Identities=33%  Similarity=0.406  Sum_probs=212.5

Q ss_pred             ccCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCC-----------hhHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 024551           14 WSLRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRD-----------QNMINERIQEWESKGFKVTGSVCDLSFGD   80 (266)
Q Consensus        14 ~~~~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~D~~~~~   80 (266)
                      +++++|+++||||++  |||.+++++|+++|++|++++|+           ......+.+++...+.+++++++|+++++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            357899999999994  99999999999999999999987           22222355556555678999999999999


Q ss_pred             HHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC
Q 024551           81 QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI  160 (266)
Q Consensus        81 ~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~  160 (266)
                      +++++++++.+.+ +++|++|||||+....++.+.+.+++++.+++|+.+++.+++++++.|.++..++||++||..+..
T Consensus        81 ~~~~~~~~~~~~~-g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         81 APNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHHhC-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            9999999999998 789999999998777778888999999999999999999999999999877778999999999888


Q ss_pred             CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHH
Q 024551          161 SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV  240 (266)
Q Consensus       161 ~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~  240 (266)
                      +.++...|+++|+++++++++++.++..+||+|++++||+++|++......       .......+..|..+|+|+++.+
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~a~~~  232 (256)
T PRK12748        160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELK-------HHLVPKFPQGRVGEPVDAARLI  232 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHH-------HhhhccCCCCCCcCHHHHHHHH
Confidence            888899999999999999999999999999999999999999987543211       1223456677889999999999


Q ss_pred             HHHhcCCCCCccccEEEeCCCcc
Q 024551          241 AFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       241 ~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +||+++...+++|+++.+|||+.
T Consensus       233 ~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        233 AFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHhCcccccccCCEEEecCCcc
Confidence            99999998999999999999975

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.3e-41  Score=285.15  Aligned_cols=248  Identities=27%  Similarity=0.385  Sum_probs=222.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +++|++|||||+++||++++++|+++|++|++++|+.+..+++.+++.+.+.++.++++|++|+++++++++++.+.+ +
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~   79 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-G   79 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            478999999999999999999999999999999999998888888887777789999999999999999999999988 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|++|||+|.....++.+.+.++|++.+++|+.+++++++.+++.|++++.++||++||..+..+.+....|+.+|+++
T Consensus        80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~  159 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL  159 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHH
Confidence            89999999998777777888999999999999999999999999999888788999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch--hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL--LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      +.++++++.++.+.||+++.++||+++|++........  ............|.++..+|+|+|++++||+++...+++|
T Consensus       160 ~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g  239 (250)
T TIGR03206       160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITG  239 (250)
T ss_pred             HHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcC
Confidence            99999999999989999999999999999765432111  1111234455678889999999999999999999999999


Q ss_pred             cEEEeCCCccC
Q 024551          254 QVISIDGGYTA  264 (266)
Q Consensus       254 ~~l~vdgG~~~  264 (266)
                      +++.+|||.++
T Consensus       240 ~~~~~~~g~~~  250 (250)
T TIGR03206       240 QVLSVSGGLTM  250 (250)
T ss_pred             cEEEeCCCccC
Confidence            99999999764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-41  Score=294.28  Aligned_cols=242  Identities=28%  Similarity=0.352  Sum_probs=208.8

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC-hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ...+++||+++||||++|||++++++|+++|++|++.+++ .+..++..+++...+.++.++++|++|+++++++++++.
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999875 456777888887777889999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-------CCCeEEEEecCCCCCCCC
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-------GNASIVFMSSVAGAISIP  163 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-------~~g~iv~vss~~~~~~~~  163 (266)
                      + + +++|++|||||+.....+.+.+.++|++.+++|+.+++++++.+.|+|+++       ..|+||++||..+..+.+
T Consensus        86 ~-~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  163 (306)
T PRK07792         86 G-L-GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV  163 (306)
T ss_pred             H-h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC
Confidence            8 7 799999999999877778888999999999999999999999999999753       147999999999998888


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHH
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      +...|+++|+++++|++.++.|+.++||+||+|+||. .|++...........  . .    ......+|+|+++.+.||
T Consensus       164 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~--~-~----~~~~~~~pe~va~~v~~L  235 (306)
T PRK07792        164 GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDV--E-A----GGIDPLSPEHVVPLVQFL  235 (306)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchh--h-h----hccCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999994 887754322211000  0 0    011234799999999999


Q ss_pred             hcCCCCCccccEEEeCCCcc
Q 024551          244 CLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +++...++||+++.+|||..
T Consensus       236 ~s~~~~~~tG~~~~v~gg~~  255 (306)
T PRK07792        236 ASPAAAEVNGQVFIVYGPMV  255 (306)
T ss_pred             cCccccCCCCCEEEEcCCeE
Confidence            99988999999999999975

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-41  Score=284.83  Aligned_cols=246  Identities=35%  Similarity=0.498  Sum_probs=218.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|+++||||+++||.+++++|+++|++|++++|+.+.++...+++...+.++.++++|++|+++++++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999998888888887777788899999999999999999999988


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHH-HHhcCCCeEEEEecCCCCCCCCC----chhh
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPL-LKASGNASIVFMSSVAGAISIPR----LSAY  168 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-m~~~~~g~iv~vss~~~~~~~~~----~~~y  168 (266)
                       +++|++|||+|.....+..+.+.+.|++.+++|+.+++++++++.|+ |.+++.++||++||..+..+.+.    ...|
T Consensus        88 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y  166 (259)
T PRK08213         88 -GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY  166 (259)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence             78999999999876667777899999999999999999999999998 77776789999999877765544    4899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +.+|++++.++++++.++.++||+++.++||+++|++.....+. .   ........|..+.++|+|+++.+.||+++.+
T Consensus       167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  242 (259)
T PRK08213        167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLER-L---GEDLLAHTPLGRLGDDEDLKGAALLLASDAS  242 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHH-H---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999876543221 1   1234556788899999999999999999999


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      .+++|+.|.+|||.++
T Consensus       243 ~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        243 KHITGQILAVDGGVSA  258 (259)
T ss_pred             cCccCCEEEECCCeec
Confidence            9999999999999875

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=292.70  Aligned_cols=238  Identities=21%  Similarity=0.266  Sum_probs=210.0

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ++.+++||+++||||++|||++++++|+++|++|++++|+++.++++.+++.. +..+..+++|++|+++++++++++.+
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999999999999999999888888753 45677788999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ +++|++|||||+....++.+.+.++|++.+++|+.+++++++.++|.|.++ .|+||++||..+..+.++...|++|
T Consensus        82 ~~-g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  159 (296)
T PRK05872         82 RF-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCAS  159 (296)
T ss_pred             Hc-CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHH
Confidence            88 789999999999887888899999999999999999999999999999775 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc--CCCCCCCCccchHHHHHHHhcCCCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK--TPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      |+++++|+++++.|+..+||+|++++||+++|++........  .........  .|+.+..+|+|+++.+++++++...
T Consensus       160 Kaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~  237 (296)
T PRK05872        160 KAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADL--PAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRAR  237 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccc--hhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999876543221  111222222  4678899999999999999998888


Q ss_pred             Ccccc
Q 024551          250 YITGQ  254 (266)
Q Consensus       250 ~~~G~  254 (266)
                      +++|.
T Consensus       238 ~i~~~  242 (296)
T PRK05872        238 RVYAP  242 (296)
T ss_pred             EEEch
Confidence            88775

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-41  Score=281.68  Aligned_cols=243  Identities=30%  Similarity=0.468  Sum_probs=216.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC-hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |++++|+++||||+++||++++++|+++|++|+++.|+ +...+++.+++.+.+.++.++++|++++++++++++++.+.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999887765 44566777777777778999999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.+  .++||++||..+..+.+.+..|+.+|
T Consensus        81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (245)
T PRK12937         81 F-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASK  157 (245)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHH
Confidence            8 78999999999877777788899999999999999999999999999865  47999999999988999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.++++++.++...||+++.|+||+++|++........   .........|+++..+|+|+++.++|++++.+.+++
T Consensus       158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~  234 (245)
T PRK12937        158 AAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAE---QIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVN  234 (245)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHH---HHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCcc
Confidence            99999999999999999999999999999999864332221   224455667899999999999999999999889999


Q ss_pred             ccEEEeCCCc
Q 024551          253 GQVISIDGGY  262 (266)
Q Consensus       253 G~~l~vdgG~  262 (266)
                      |+.+.+|||+
T Consensus       235 g~~~~~~~g~  244 (245)
T PRK12937        235 GQVLRVNGGF  244 (245)
T ss_pred             ccEEEeCCCC
Confidence            9999999986

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=2.7e-41  Score=281.23  Aligned_cols=232  Identities=29%  Similarity=0.460  Sum_probs=198.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++|+++||||++|||++++++|+++|++|+++.+ +++..+++.+++     .+.++.+|++|++++.+++++    +
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~   73 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S   73 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h
Confidence            478999999999999999999999999999988765 555555544433     255788999999988877753    3


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y~~sK  172 (266)
                       +++|++|||+|.....+..+.+.++|++.+++|+.+++.+++.+++.|++  .|+||++||..+. .+.++...|+.+|
T Consensus        74 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sK  150 (237)
T PRK12742         74 -GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASK  150 (237)
T ss_pred             -CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhH
Confidence             68999999999877677778899999999999999999999999999964  4799999998874 5778889999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.+++.++.++.++|||||+|+||+++|++.....+  ..   .......|++|+.+|+|+++.+.||+++...++|
T Consensus       151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~--~~---~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~  225 (237)
T PRK12742        151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP--MK---DMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVT  225 (237)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH--HH---HHHHhcCCCCCCCCHHHHHHHHHHHcCcccCccc
Confidence            999999999999999999999999999999998654221  11   2233456889999999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 024551          253 GQVISIDGGYT  263 (266)
Q Consensus       253 G~~l~vdgG~~  263 (266)
                      |+.+.+|||++
T Consensus       226 G~~~~~dgg~~  236 (237)
T PRK12742        226 GAMHTIDGAFG  236 (237)
T ss_pred             CCEEEeCCCcC
Confidence            99999999975

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=286.92  Aligned_cols=247  Identities=28%  Similarity=0.400  Sum_probs=202.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC----ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR----DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      +++++|+++||||++|||+++|++|+++|++|+++.+    +.+..+++.+++...+.++.++++|++|+++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            3468999999999999999999999999999776654    345566666777666678889999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      .+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+.|+|++.  +++++++|.......+.+..|+
T Consensus        84 ~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~~~~~~~~~Y~  160 (257)
T PRK12744         84 KAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGAFTPFYSAYA  160 (257)
T ss_pred             HHhh-CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhcccCCCcccch
Confidence            9988 789999999998777778888999999999999999999999999999753  6888774443334567789999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCC--CCCCccchHHHHHHHhcCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA--RSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~eia~~~~~l~s~~  247 (266)
                      +||+|++.|+++++.|+.++||+|++++||+++|++..+.................++.  |+.+|+|+++.++||+++ 
T Consensus       161 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-  239 (257)
T PRK12744        161 GSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD-  239 (257)
T ss_pred             hhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-
Confidence            99999999999999999999999999999999998764432211111001111123333  789999999999999986 


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      ..+++|+++.+|||+.+
T Consensus       240 ~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        240 GWWITGQTILINGGYTT  256 (257)
T ss_pred             cceeecceEeecCCccC
Confidence            67999999999999865

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=288.95  Aligned_cols=238  Identities=27%  Similarity=0.329  Sum_probs=209.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-------HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-------INERIQEWESKGFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.       +++..+++...+.++.++++|+++++++++++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999999999999997652       55666777766778999999999999999999


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC--CC
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI--PR  164 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~--~~  164 (266)
                      +++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||+++|..+..+.  ++
T Consensus        82 ~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  160 (273)
T PRK08278         82 AKAVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAP  160 (273)
T ss_pred             HHHHHHh-CCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCC
Confidence            9999988 78999999999877777888899999999999999999999999999998877899999998877776  78


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecC-cccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHH
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW-AVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      +..|++||++++.|+++++.|+.++||+||+|+|| +++|++.+.....           ..+..+..+|+++|+.++++
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~-----------~~~~~~~~~p~~va~~~~~l  229 (273)
T PRK08278        161 HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG-----------DEAMRRSRTPEIMADAAYEI  229 (273)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc-----------cccccccCCHHHHHHHHHHH
Confidence            89999999999999999999999999999999999 6888764432111           23456788999999999999


Q ss_pred             hcCCCCCccccEEEeCCCccC
Q 024551          244 CLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +++...++||+.+ +|++...
T Consensus       230 ~~~~~~~~~G~~~-~~~~~~~  249 (273)
T PRK08278        230 LSRPAREFTGNFL-IDEEVLR  249 (273)
T ss_pred             hcCccccceeEEE-eccchhh
Confidence            9998899999988 6877643

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-41  Score=280.92  Aligned_cols=249  Identities=31%  Similarity=0.416  Sum_probs=219.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++++|+++||||+++||++++++|+++|++|++++|+.+..++..+++. .+.++.++++|++|+++++++++++.+.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999988887777776 45678999999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||+|......+.+.+.+++++.+++|+.+++.+++.+++.|++++.++|+++||..+..+.+....|+.+|+
T Consensus        80 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~  158 (252)
T PRK06138         80 -GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG  158 (252)
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence             7899999999988777778889999999999999999999999999999887889999999998888889999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-HHHH-HHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-VQEY-VKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      +++.++++++.++..+||++++++||++.|++......... .... .......+..++.+++|+++.+++++.+...++
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~  238 (252)
T PRK06138        159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFA  238 (252)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            99999999999999999999999999999998665432111 1111 122234567778999999999999999888999


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      +|+.+.+|||++.
T Consensus       239 ~g~~~~~~~g~~~  251 (252)
T PRK06138        239 TGTTLVVDGGWLA  251 (252)
T ss_pred             cCCEEEECCCeec
Confidence            9999999999875

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-41  Score=279.57  Aligned_cols=222  Identities=18%  Similarity=0.251  Sum_probs=194.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |+++||+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++..+++|++|+++++++++++.+.+
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999999998888777788899999999999999999999998


Q ss_pred             CC-cccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhh
Q 024551           94 DG-KLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        94 ~~-~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                       + ++|++|||+|.. ...++.+.+.++|.+.+++|+.+++.+++.++|+|++++ .|+||++||..+   .+++..|++
T Consensus        81 -g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y~a  156 (227)
T PRK08862         81 -NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDLTGVES  156 (227)
T ss_pred             -CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCcchhHH
Confidence             6 899999999854 345788889999999999999999999999999998754 689999999754   356789999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      +|+|+.+|+|+++.|++++|||||+|+||+++|+....   ..   +|....           ||++.+..||++  +.|
T Consensus       157 sKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~---~~---~~~~~~-----------~~~~~~~~~l~~--~~~  217 (227)
T PRK08862        157 SNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD---AV---HWAEIQ-----------DELIRNTEYIVA--NEY  217 (227)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC---HH---HHHHHH-----------HHHHhheeEEEe--ccc
Confidence            99999999999999999999999999999999983211   11   122211           899999999996  679


Q ss_pred             ccccEEEe
Q 024551          251 ITGQVISI  258 (266)
Q Consensus       251 ~~G~~l~v  258 (266)
                      +||+.|..
T Consensus       218 ~tg~~~~~  225 (227)
T PRK08862        218 FSGRVVEA  225 (227)
T ss_pred             ccceEEee
Confidence            99998763

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1e-40  Score=278.87  Aligned_cols=243  Identities=28%  Similarity=0.376  Sum_probs=215.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||+++||++++++|+++|+.|++.+|+.+.++++.+.+   +.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL   78 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999988877666544   4578889999999999999999999988


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||||.....++.+.+.++|++.+++|+.+++++++.+.+.|.+++.++||++||..+..+.+....|+.+|+
T Consensus        79 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~  157 (245)
T PRK12936         79 -EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKA  157 (245)
T ss_pred             -CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHH
Confidence             7899999999987777778889999999999999999999999999887777789999999998888899999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      ++.++++.++.++..+|+++++|+||+++|++..... ...   ........|..|..+|+|+++.+.||+++...+++|
T Consensus       158 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G  233 (245)
T PRK12936        158 GMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN-DKQ---KEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTG  233 (245)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC-hHH---HHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCC
Confidence            9999999999999999999999999999998765432 111   122334578889999999999999999988889999


Q ss_pred             cEEEeCCCccC
Q 024551          254 QVISIDGGYTA  264 (266)
Q Consensus       254 ~~l~vdgG~~~  264 (266)
                      +.+.+|||.++
T Consensus       234 ~~~~~~~g~~~  244 (245)
T PRK12936        234 QTIHVNGGMAM  244 (245)
T ss_pred             CEEEECCCccc
Confidence            99999999764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.1e-41  Score=279.53  Aligned_cols=220  Identities=27%  Similarity=0.343  Sum_probs=199.6

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+..+.+|++||||||++|+|+++|.+|+++|+++++.+.+.+..+++++++++.| +++.+.||+++.+++.+..++++
T Consensus        31 ~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   31 KPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             cchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHH
Confidence            36778999999999999999999999999999999999999999999999998875 99999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.. |++|+||||||+....++.+.+++++++++++|+.|+|..+|+++|.|.++.+|.||+|+|.+|..+.++...|++
T Consensus       110 ~e~-G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~Yca  188 (300)
T KOG1201|consen  110 KEV-GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCA  188 (300)
T ss_pred             Hhc-CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhh
Confidence            998 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhc---cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          171 SKGAINQLTKNLACEWA---TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       171 sK~al~~~~~~~a~el~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      ||+|+.+|.+++..|+.   .+||+...++|++++|.|.....+-            ..+--..+|+++|+.++.-+
T Consensus       189 SK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~------------~~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  189 SKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPF------------PTLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCC------------ccccCCCCHHHHHHHHHHHH
Confidence            99999999999999987   4479999999999999988752111            11122356788888776544

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.1e-41  Score=280.56  Aligned_cols=233  Identities=30%  Similarity=0.389  Sum_probs=200.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++++|+++|||++++||++++++|+++|++|++++|+....         ...++.++++|++++      ++++.+.+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~   65 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWV   65 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhh
Confidence            357899999999999999999999999999999999975421         134688899999987      44444455


Q ss_pred             CCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|++|||+|... ..++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|+.+|
T Consensus        66 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  144 (235)
T PRK06550         66 -PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASK  144 (235)
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHH
Confidence             78999999999763 3567788999999999999999999999999999887789999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++++++++.|+.++||+|++|+||+++|++....+.....  ........|++|+.+|+|+|+.++||+++...+++
T Consensus       145 ~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  222 (235)
T PRK06550        145 HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGL--ADWVARETPIKRWAEPEEVAELTLFLASGKADYMQ  222 (235)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHH--HHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCC
Confidence            9999999999999999999999999999999987554432211  12334567899999999999999999999899999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.+.+|||+++
T Consensus       223 g~~~~~~gg~~~  234 (235)
T PRK06550        223 GTIVPIDGGWTL  234 (235)
T ss_pred             CcEEEECCceec
Confidence            999999999865

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.3e-40  Score=278.19  Aligned_cols=242  Identities=29%  Similarity=0.361  Sum_probs=213.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh-HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |+++|||++++||+++|++|+++|++|++++|+.+ ..++..+.+...+.++.++++|++|+++++++++++.+.+ +++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence            68999999999999999999999999999999854 2333434444445678999999999999999999999988 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |++|||+|.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|+.+|+++++
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            99999999887777888899999999999999999999999999988778999999999999899999999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEE
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS  257 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~  257 (266)
                      |++.++.++.++||+++.++||+++|++...... .   .........|.++..+++|+++.+.||+++...+++|+.+.
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~  237 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGP-E---VLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETIS  237 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH-H---HHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEE
Confidence            9999999999999999999999999998655321 1   12334556788889999999999999999888999999999


Q ss_pred             eCCCccCC
Q 024551          258 IDGGYTAG  265 (266)
Q Consensus       258 vdgG~~~~  265 (266)
                      +|||++++
T Consensus       238 ~~~g~~~~  245 (245)
T PRK12824        238 INGGLYMH  245 (245)
T ss_pred             ECCCeecC
Confidence            99999875

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-40  Score=280.90  Aligned_cols=249  Identities=27%  Similarity=0.369  Sum_probs=219.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|++|||||+++||++++++|+++|++|++++|+++..++..+++.+.+.++.++++|++|.++++++++++.+.+ 
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   82 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF-   82 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4679999999999999999999999999999999999999999998888777788999999999999999999999888 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHH-HhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLL-KASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m-~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|++|||+|......+.+.+.++|++.+++|+.+++.+++.+++.| ++.+.++||++||..+..+.+....|+++|+
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~  162 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKH  162 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence            789999999998877777788999999999999999999999999999 6666789999999988888888899999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-------HHHHH-HHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-------VQEYV-KLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      +++++++.++.++.+.||+++.++||+++|++....+....       ..... ......+.+++.+++|++++++++++
T Consensus       163 a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~  242 (262)
T PRK13394        163 GLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS  242 (262)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999987654322110       01011 12234567889999999999999999


Q ss_pred             CCCCCccccEEEeCCCccC
Q 024551          246 PAASYITGQVISIDGGYTA  264 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~  264 (266)
                      ....+++|+++.+|||+.+
T Consensus       243 ~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        243 FPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             ccccCCcCCEEeeCCceec
Confidence            8778999999999999864

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.5e-41  Score=309.14  Aligned_cols=245  Identities=35%  Similarity=0.511  Sum_probs=215.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ..+||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+ 
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   77 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF-   77 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh-
Confidence            457999999999999999999999999999999999998887776665   4577889999999999999999999998 


Q ss_pred             CcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCC-eEEEEecCCCCCCCCCchhhhhh
Q 024551           95 GKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        95 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      +++|+||||||+..  ..++.+.+.++|++.+++|+.+++.++++++|+|.+++.| +||++||..+..+.+.+..|+++
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~as  157 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSAS  157 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHH
Confidence            78999999999743  3567788999999999999999999999999999876655 99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+++++|+++++.|+.++||+|++|+||+++|++......... ..........|.++..+|+|+++.+.||+++...++
T Consensus       158 Kaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~  236 (520)
T PRK06484        158 KAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGK-LDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYI  236 (520)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccch-hhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            9999999999999999999999999999999998654322111 111233445678889999999999999999999999


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      +|+.+.+|||++.
T Consensus       237 ~G~~~~~~gg~~~  249 (520)
T PRK06484        237 TGSTLVVDGGWTV  249 (520)
T ss_pred             cCceEEecCCeec
Confidence            9999999999864

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.9e-40  Score=279.19  Aligned_cols=240  Identities=27%  Similarity=0.351  Sum_probs=205.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++|+++||||++|||+++|+.|+++|++|++++|+++.+++..+++...  +..+.++++|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999888888887543  2356677999999999999999999988


Q ss_pred             CCcccEEEecccccc---ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-------
Q 024551           94 DGKLNILVNNAALVV---MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-------  163 (266)
Q Consensus        94 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-------  163 (266)
                       +++|++|||||...   ..++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+..       
T Consensus        82 -~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         82 -GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             -CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence             78999999998542   3467788999999999999999999999999999988788999999987654311       


Q ss_pred             ---CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHH
Q 024551          164 ---RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV  240 (266)
Q Consensus       164 ---~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~  240 (266)
                         ....|+++|+++++|+++++.|+.++||+|+.|+||++.++...     ..   ........+..+..+|+|+|+++
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~dva~~~  232 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE-----AF---LNAYKKCCNGKGMLDPDDICGTL  232 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH-----HH---HHHHHhcCCccCCCCHHHhhhhH
Confidence               12469999999999999999999999999999999998875411     11   12223345667889999999999


Q ss_pred             HHHhcCCCCCccccEEEeCCCccC
Q 024551          241 AFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       241 ~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +|++++...+++|+.+.+|||+++
T Consensus       233 ~~l~~~~~~~~~g~~~~~~~g~~~  256 (256)
T PRK09186        233 VFLLSDQSKYITGQNIIVDDGFSL  256 (256)
T ss_pred             hheeccccccccCceEEecCCccC
Confidence            999999899999999999999864

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-40  Score=279.30  Aligned_cols=243  Identities=33%  Similarity=0.444  Sum_probs=212.5

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCC-hhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ++||||++|||++++++|+++|++|++++|+ .+.++++.+++.+..  ..+.++++|++|+++++++++++.+.+ +++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CCc
Confidence            7999999999999999999999999999998 777777777776542  345678999999999999999999998 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |++|||||....+++.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||..+..+.+.+..|+++|+++++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            99999999887778888899999999999999999999999999998777899999999999999999999999999999


Q ss_pred             HHHHHHHHhccCC--cEEEEEecCcccCCCCCCCccc-hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          178 LTKNLACEWATDS--IRVNAVSPWAVNTQISPPDLND-LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       178 ~~~~~a~el~~~g--i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      |+++++.|+..++  |+|++|+||+++|++....... .............|.+++.+|+|+++.++||+++...++||+
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  240 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA  240 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            9999999998765  9999999999999987542211 111112334456788899999999999999999999999999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      .+.+|||.+.
T Consensus       241 ~i~~~~g~~~  250 (251)
T PRK07069        241 ELVIDGGICA  250 (251)
T ss_pred             EEEECCCeec
Confidence            9999999763

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.5e-40  Score=276.26  Aligned_cols=243  Identities=30%  Similarity=0.462  Sum_probs=213.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEec-CChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++|+++||||+++||++++++|+++|++|+++. |+++..++..+++.+.+.++.++++|++|++++.++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            36799999999999999999999999999998764 45677777778887767789999999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||||......+.+.+.+++++.+++|+.+++++++.++|.|.+++.++||++||..+..+.+++..|+++|+
T Consensus        83 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK12935         83 -GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKA  161 (247)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHH
Confidence             7899999999988777777889999999999999999999999999998777789999999998888889999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      ++++++++++.++.+.||+++.++||+++|++..... ...   ........+.+++..|||++++++|++.+ ..+++|
T Consensus       162 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-~~~---~~~~~~~~~~~~~~~~edva~~~~~~~~~-~~~~~g  236 (247)
T PRK12935        162 GMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP-EEV---RQKIVAKIPKKRFGQADEIAKGVVYLCRD-GAYITG  236 (247)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc-HHH---HHHHHHhCCCCCCcCHHHHHHHHHHHcCc-ccCccC
Confidence            9999999999999999999999999999998765432 111   12333456778899999999999999975 468999


Q ss_pred             cEEEeCCCcc
Q 024551          254 QVISIDGGYT  263 (266)
Q Consensus       254 ~~l~vdgG~~  263 (266)
                      +.+++|||..
T Consensus       237 ~~~~i~~g~~  246 (247)
T PRK12935        237 QQLNINGGLY  246 (247)
T ss_pred             CEEEeCCCcc
Confidence            9999999975

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-40  Score=279.24  Aligned_cols=241  Identities=30%  Similarity=0.428  Sum_probs=208.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++.     ..++++|++|+++++++++++.+.+ +
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~-~   78 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY-G   78 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence            689999999999999999999999999999999999887776665542     2578899999999999999999887 7


Q ss_pred             cccEEEeccccccc--cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-CCchhhhhhH
Q 024551           96 KLNILVNNAALVVM--KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-PRLSAYAASK  172 (266)
Q Consensus        96 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-~~~~~y~~sK  172 (266)
                      ++|++|||||...+  ..+.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+. ++...|+.+|
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sK  158 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASK  158 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHH
Confidence            89999999997643  35667789999999999999999999999999988777899999998776665 3678899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++++++.++.++.++||+|++|+||+++|++........ .....+.....|.+++.+|+|+++.+.||+++...+++
T Consensus       159 aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  237 (255)
T PRK06057        159 GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD-PERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFIT  237 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            99999999999999999999999999999999876543221 11112333456788999999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 024551          253 GQVISIDGGYT  263 (266)
Q Consensus       253 G~~l~vdgG~~  263 (266)
                      |+.+.+|||.+
T Consensus       238 g~~~~~~~g~~  248 (255)
T PRK06057        238 ASTFLVDGGIS  248 (255)
T ss_pred             CcEEEECCCee
Confidence            99999999975

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2e-40  Score=281.09  Aligned_cols=240  Identities=26%  Similarity=0.305  Sum_probs=197.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHH----HHHHHHHHhh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESK-GFKVTGSVCDLSFGDQR----EKLIETVSSV   92 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i----~~~~~~~~~~   92 (266)
                      ++++||||++|||++++++|+++|++|+++.| +++.++++.+++... +.++.++++|++|++++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            68999999999999999999999999998765 567777777777543 45677899999999865    5566666666


Q ss_pred             cCCcccEEEeccccccccCCCCCCH-----------HHHHHHhccchhhHHHHHHHHHHHHHhc------CCCeEEEEec
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTL-----------EEYSSVMSTNVESSYHLCQLAHPLLKAS------GNASIVFMSS  155 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~iv~vss  155 (266)
                      + +++|+||||||.....++.+.+.           ++|++++++|+.++++++++++|+|+..      ..++|++++|
T Consensus        82 ~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        82 F-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             c-CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            7 78999999999865555544343           3599999999999999999999999643      2468999999


Q ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCC-CCCCcc
Q 024551          156 VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA-RSAEPN  234 (266)
Q Consensus       156 ~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  234 (266)
                      ..+..+.+++..|++||+++++|+++++.|+.++||+|++|+||+++|+...   .....   .......|+. +..+|+
T Consensus       161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~  234 (267)
T TIGR02685       161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM---PFEVQ---EDYRRKVPLGQREASAE  234 (267)
T ss_pred             hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc---chhHH---HHHHHhCCCCcCCCCHH
Confidence            9998888999999999999999999999999999999999999999876321   11111   1222345664 788999


Q ss_pred             chHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          235 EISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       235 eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |+++.++||+++...+++|+.+.+|||+++.
T Consensus       235 ~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       235 QIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             HHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            9999999999999999999999999998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-40  Score=289.46  Aligned_cols=225  Identities=27%  Similarity=0.316  Sum_probs=201.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999999999999999998878889999999999999999999999987


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||||+...+++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||+++|..+..+.|....|++||+
T Consensus        83 -g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKa  161 (330)
T PRK06139         83 -GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKF  161 (330)
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHH
Confidence             7899999999998888899999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccC-CcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          174 AINQLTKNLACEWATD-SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       174 al~~~~~~~a~el~~~-gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      ++.+|+++++.|+.++ ||+|++|+||+++|++........      . ....+.....+||++|+.+++++..
T Consensus       162 al~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~------~-~~~~~~~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        162 GLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT------G-RRLTPPPPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             HHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc------c-ccccCCCCCCCHHHHHHHHHHHHhC
Confidence            9999999999999875 899999999999999865421110      0 0112233467899999999999853

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-40  Score=279.15  Aligned_cols=247  Identities=29%  Similarity=0.374  Sum_probs=217.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ++++|+++|||++++||++++++|+++|++|++++|+++..+...+++...  +.++.++++|++|+++++++++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888777777654  357889999999999999999999998


Q ss_pred             cCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      + +++|++|||+|... .+++.+.+.++|++++++|+.+++++++.+.+.|.+++.++|+++||..+..+.+....|+++
T Consensus        84 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  162 (276)
T PRK05875         84 H-GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVT  162 (276)
T ss_pred             c-CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHH
Confidence            8 78999999999753 356777889999999999999999999999999987777899999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |++++.+++.++.++...+|+++.|+||+++|++..........  ........|..++.+++|++++++||+++...++
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  240 (276)
T PRK05875        163 KSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPEL--SADYRACTPLPRVGEVEDVANLAMFLLSDAASWI  240 (276)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHH--HHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            99999999999999999999999999999999987653332211  1233446688899999999999999999888899


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      +|+.+.+|||+.+
T Consensus       241 ~g~~~~~~~g~~~  253 (276)
T PRK05875        241 TGQVINVDGGHML  253 (276)
T ss_pred             CCCEEEECCCeec
Confidence            9999999999864

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-40  Score=276.26  Aligned_cols=248  Identities=30%  Similarity=0.421  Sum_probs=220.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +++|+++|||++++||++++++|+++|++|++++|+++..++..+++...+.+++++.+|++|+++++++++++.+.+ +
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   80 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-G   80 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            578999999999999999999999999999999999999888888887777889999999999999999999999988 6


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|++|||+|......+.+.+.+++++.+++|+.+++++++.+++.|++++.++||++||..+..+.++...|+++|+++
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~  160 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL  160 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence            89999999998877778888999999999999999999999999999988889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-------hHHHH-HHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-------LVQEY-VKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +++++.++.++.+.||+|+.++||+++|++........       ..... .......+.+++.+++|+|+.+++|+.+.
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  240 (258)
T PRK12429        161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA  240 (258)
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999998765332210       01111 12223346678999999999999999888


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      ...++|+.+.+|||++.
T Consensus       241 ~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        241 AKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             ccCccCCeEEeCCCEec
Confidence            88899999999999875

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=6.4e-40  Score=273.52  Aligned_cols=241  Identities=32%  Similarity=0.421  Sum_probs=215.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |++|||||+++||++++++|+++|++|+++.| +++..++..+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            78999999999999999999999999999888 6766777666666556789999999999999999999999988 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |++|||+|......+.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+++..|+++|++++.
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~  159 (242)
T TIGR01829        80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG  159 (242)
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence            99999999887777788899999999999999999999999999988877899999999998888999999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEE
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS  257 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~  257 (266)
                      +++.++.++..+||+++.++||+++|++..... ....   .......|..++.+|+|+++.+.||+++...+++|+.|.
T Consensus       160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~  235 (242)
T TIGR01829       160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMR-EDVL---NSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLS  235 (242)
T ss_pred             HHHHHHHHhhhhCeEEEEEeeCCCcCccccccc-hHHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            999999999999999999999999999865432 1111   223345788899999999999999999988999999999


Q ss_pred             eCCCccC
Q 024551          258 IDGGYTA  264 (266)
Q Consensus       258 vdgG~~~  264 (266)
                      +|||+++
T Consensus       236 ~~gg~~~  242 (242)
T TIGR01829       236 INGGLYM  242 (242)
T ss_pred             ecCCccC
Confidence            9999864

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.2e-40  Score=280.71  Aligned_cols=237  Identities=21%  Similarity=0.228  Sum_probs=199.6

Q ss_pred             EEEEecCCCchHHHHHHHHHH----CCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           20 TALVTGGTRGIGYAIVEELAR----FGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~----~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++||||++|||+++|++|++    +|++|++++|+++.++++.+++...  +.++.++++|++|+++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999999998888762  4578899999999999999999998876


Q ss_pred             CCc----ccEEEecccccccc--CCCC-CCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--CCeEEEEecCCCCCCCCC
Q 024551           94 DGK----LNILVNNAALVVMK--RATE-YTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--NASIVFMSSVAGAISIPR  164 (266)
Q Consensus        94 ~~~----id~lv~~ag~~~~~--~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~vss~~~~~~~~~  164 (266)
                       ++    .|++|||||.....  ...+ .+.++|++.+++|+.+++++++.++|.|++++  .++||++||..+..+.++
T Consensus        82 -g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        82 -RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             -ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence             43    36999999975432  2232 35789999999999999999999999998653  479999999999999999


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-hHHHHHHHHhcCCCCCCCCccchHHHHHHH
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-LVQEYVKLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      +..|++||+|+++|+++++.|+.++||+||+|+||+++|++.....+.. ............|++|..+|+|+|+.++||
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l  240 (256)
T TIGR01500       161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSL  240 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999864321110 011112334456889999999999999999


Q ss_pred             hcCCCCCccccEEEe
Q 024551          244 CLPAASYITGQVISI  258 (266)
Q Consensus       244 ~s~~~~~~~G~~l~v  258 (266)
                      ++ ..+++||+++..
T Consensus       241 ~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       241 LE-KDKFKSGAHVDY  254 (256)
T ss_pred             Hh-cCCcCCcceeec
Confidence            96 578999998864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-40  Score=274.75  Aligned_cols=214  Identities=27%  Similarity=0.275  Sum_probs=183.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +++||||++|||++++++|+++|++|++++|+.++++++.+++     ++.++++|++|+++++++++++.    +++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~----~~id~   72 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFP----HHLDT   72 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHh----hcCcE
Confidence            5899999999999999999999999999999998887776654     35678999999999999988764    25899


Q ss_pred             EEeccccccc------cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551          100 LVNNAALVVM------KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus       100 lv~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +|||+|....      .++.+ +.++|++.+++|+.++++++++++|.|++  .|+||+++|..    .+....|++||+
T Consensus        73 lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKa  145 (223)
T PRK05884         73 IVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKA  145 (223)
T ss_pred             EEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHH
Confidence            9999985321      12333 57899999999999999999999999965  48999999975    356789999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      |+.+|+|+++.|++++|||||+|+||+++|++....             ...|.   .+|+|+++.++||+++.++++||
T Consensus       146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-------------~~~p~---~~~~~ia~~~~~l~s~~~~~v~G  209 (223)
T PRK05884        146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL-------------SRTPP---PVAAEIARLALFLTTPAARHITG  209 (223)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc-------------cCCCC---CCHHHHHHHHHHHcCchhhccCC
Confidence            999999999999999999999999999999863210             11233   38999999999999999999999


Q ss_pred             cEEEeCCCccCC
Q 024551          254 QVISIDGGYTAG  265 (266)
Q Consensus       254 ~~l~vdgG~~~~  265 (266)
                      +.+.+|||+..+
T Consensus       210 ~~i~vdgg~~~~  221 (223)
T PRK05884        210 QTLHVSHGALAH  221 (223)
T ss_pred             cEEEeCCCeecc
Confidence            999999999875

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-40  Score=274.44  Aligned_cols=240  Identities=32%  Similarity=0.422  Sum_probs=207.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |+++||||++|||++++++|+++|++|+++ .|+++.+++..+++...+.++.+++||++|+++++++++++.+.+ +++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CCC
Confidence            799999999999999999999999999875 567777888888887767789999999999999999999999888 789


Q ss_pred             cEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC---CCeEEEEecCCCCCCCCC-chhhhhhH
Q 024551           98 NILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG---NASIVFMSSVAGAISIPR-LSAYAASK  172 (266)
Q Consensus        98 d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~-~~~y~~sK  172 (266)
                      |++|||||.... .++.+.+.++|++.+++|+.+++++++.+++.|..++   .++||++||..+..+.+. +..|++||
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            999999998653 4577889999999999999999999999999987653   578999999888777664 57899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++|+++++.++.++||+|+.|+||+++|++........   .........|..+..+|||+++.++|++++...+++
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~  238 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPG---RAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVT  238 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHH---HHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcC
Confidence            99999999999999999999999999999999865321111   112333456788889999999999999999999999


Q ss_pred             ccEEEeCCCc
Q 024551          253 GQVISIDGGY  262 (266)
Q Consensus       253 G~~l~vdgG~  262 (266)
                      |++|.+|||.
T Consensus       239 G~~~~~~gg~  248 (248)
T PRK06947        239 GALLDVGGGR  248 (248)
T ss_pred             CceEeeCCCC
Confidence            9999999983

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=274.51  Aligned_cols=248  Identities=31%  Similarity=0.403  Sum_probs=216.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++|+++||||+++||+.++++|+++|++ |++++|+.+..++..+++...+.++.++++|+++++++.++++.+.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999 9999999888888887886667788899999999999999999999988


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+....|+.+|
T Consensus        83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  161 (260)
T PRK06198         83 -GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASK  161 (260)
T ss_pred             -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHH
Confidence             6899999999988777777889999999999999999999999999997654 58999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC---ccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD---LNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +++++|+++++.|+...||+|++|+||++.|++....   +...............|.+++.+++|+++.+++++++..+
T Consensus       162 ~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  241 (260)
T PRK06198        162 GALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESG  241 (260)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhC
Confidence            9999999999999999999999999999999874321   1111111112333456788899999999999999998889


Q ss_pred             CccccEEEeCCCcc
Q 024551          250 YITGQVISIDGGYT  263 (266)
Q Consensus       250 ~~~G~~l~vdgG~~  263 (266)
                      +++|+.|.+|||..
T Consensus       242 ~~~G~~~~~~~~~~  255 (260)
T PRK06198        242 LMTGSVIDFDQSVW  255 (260)
T ss_pred             CccCceEeECCccc
Confidence            99999999999864

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-39  Score=271.75  Aligned_cols=245  Identities=28%  Similarity=0.363  Sum_probs=213.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||+++||++++++|+++|++|++++|+++..+++.+++...+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999888888888776666678889999999999999999999988


Q ss_pred             CCcccEEEecccccc---ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           94 DGKLNILVNNAALVV---MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        94 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                       +++|+||||||...   ..++.+.+.++|++.+++|+.++++++++++|+|.+.+.++||++||..++.   +...|++
T Consensus        82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~  157 (250)
T PRK07774         82 -GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGL  157 (250)
T ss_pred             -CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHH
Confidence             68999999999763   3456677899999999999999999999999999887788999999987653   4578999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||++++.++++++.++...||+++.++||+++|++.....+..   .........+..+..+|+|+++.+++++++...+
T Consensus       158 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  234 (250)
T PRK07774        158 AKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKE---FVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASW  234 (250)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhC
Confidence            9999999999999999999999999999999999876543322   1233445567778889999999999999887778


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      .+|+.+.+|+|.++.
T Consensus       235 ~~g~~~~v~~g~~~~  249 (250)
T PRK07774        235 ITGQIFNVDGGQIIR  249 (250)
T ss_pred             cCCCEEEECCCeecc
Confidence            899999999998763

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=6.6e-40  Score=274.76  Aligned_cols=224  Identities=18%  Similarity=0.201  Sum_probs=195.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |+++||||++|||+++|++|+ +|++|++++|++++++++.+++.+.+. .+.++++|++|+++++++++++.+.+ +++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCC
Confidence            579999999999999999999 599999999999999999999877654 58899999999999999999999988 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      |++|||||.....+..+.+.+++++.+++|+.+++++++.++|.|.+++ .|+||++||..+..+.++...|++||+|++
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            9999999987655566677788899999999999999999999998764 689999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEE
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI  256 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l  256 (266)
                      +|+++++.|+.++||+||+++||+++|++.....+               .....+|||+|+.++++++....   ++.+
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~---------------~~~~~~pe~~a~~~~~~~~~~~~---~~~~  220 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP---------------APMSVYPRDVAAAVVSAITSSKR---STTL  220 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC---------------CCCCCCHHHHHHHHHHHHhcCCC---CceE
Confidence            99999999999999999999999999998643211               11135899999999999976432   5567


Q ss_pred             EeCCCc
Q 024551          257 SIDGGY  262 (266)
Q Consensus       257 ~vdgG~  262 (266)
                      .+++++
T Consensus       221 ~~~~~~  226 (246)
T PRK05599        221 WIPGRL  226 (246)
T ss_pred             EeCccH
Confidence            777765

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-39  Score=271.33  Aligned_cols=241  Identities=29%  Similarity=0.386  Sum_probs=208.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEec-CChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +|++|||||+++||.+++++|+++|++|++.. |+++..++..+++...+.++.++++|++|.++++++++++.+.+ ++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CC
Confidence            57999999999999999999999999988876 55666777777777666778899999999999999999999998 78


Q ss_pred             ccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC---CCeEEEEecCCCCCCCCC-chhhhhh
Q 024551           97 LNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG---NASIVFMSSVAGAISIPR-LSAYAAS  171 (266)
Q Consensus        97 id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~-~~~y~~s  171 (266)
                      +|++|||||.... .++.+.+.++|++.+++|+.+++.+++.+++.|.++.   .|+||++||..+..+.+. +..|+++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            9999999998653 4677889999999999999999999999999997642   578999999988887776 4679999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+++++|++.++.++.++||+|+.|+||++.|++........   .........|+++..+|+|+++.++|++++...++
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~  237 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPG---RVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYT  237 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999999999999999999754322111   11234456788999999999999999999888899


Q ss_pred             cccEEEeCCCc
Q 024551          252 TGQVISIDGGY  262 (266)
Q Consensus       252 ~G~~l~vdgG~  262 (266)
                      +|+.+.+|||.
T Consensus       238 ~g~~~~~~gg~  248 (248)
T PRK06123        238 TGTFIDVSGGR  248 (248)
T ss_pred             cCCEEeecCCC
Confidence            99999999973

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-39  Score=271.52  Aligned_cols=239  Identities=30%  Similarity=0.373  Sum_probs=207.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ..+|+++||||++|||++++++|+++|++|+++.+ +.+.++++.+++...+.+++++++|++|.+++.++++++.+.+ 
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-   85 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL-   85 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            46899999999999999999999999999987665 5666777777776667789999999999999999999999988 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||||.....++.+.+.++|++.+++|+.+++++++.+.+.|.+...++||+++|..+..+.|.+..|++||++
T Consensus        86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a  165 (258)
T PRK09134         86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAA  165 (258)
T ss_pred             CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHH
Confidence            78999999999887777888899999999999999999999999999988777899999998777788888899999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++++++++.++..+ |+|++|+||++.|+....   .   ..+.......+.++..+++|+|++++++++  ..+++|+
T Consensus       166 ~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~---~---~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~--~~~~~g~  236 (258)
T PRK09134        166 LWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS---P---EDFARQHAATPLGRGSTPEEIAAAVRYLLD--APSVTGQ  236 (258)
T ss_pred             HHHHHHHHHHHhcCC-cEEEEeecccccCCcccC---h---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhc--CCCcCCC
Confidence            999999999999876 999999999998864221   1   112233345677888999999999999996  4679999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      .+.+|||.++
T Consensus       237 ~~~i~gg~~~  246 (258)
T PRK09134        237 MIAVDGGQHL  246 (258)
T ss_pred             EEEECCCeec
Confidence            9999999765

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-39  Score=270.87  Aligned_cols=242  Identities=30%  Similarity=0.411  Sum_probs=209.8

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +..+++++|+++|||++++||+++++.|+++|++|++++|+.+.++++.+..     .+.++.+|++++++++++++.  
T Consensus         2 ~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~--   74 (245)
T PRK07060          2 NMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA--   74 (245)
T ss_pred             CcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH--
Confidence            3446689999999999999999999999999999999999988776655543     356788999999998888775  


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                        + +++|++|||+|....++..+.+.++|++.+++|+.+++.+++++.+.+++++ .++||++||..+..+.+....|+
T Consensus        75 --~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~  151 (245)
T PRK07060         75 --A-GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYC  151 (245)
T ss_pred             --h-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhH
Confidence              3 6799999999988777777789999999999999999999999999997654 48999999999998889999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      .+|++++.+++.++.++.+.||++++++||++.|++....+.....  ........|.+++.+++|+++.+++++++...
T Consensus       152 ~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~  229 (245)
T PRK07060        152 ASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQK--SGPMLAAIPLGRFAEVDDVAAPILFLLSDAAS  229 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHH--HHHHHhcCCCCCCCCHHHHHHHHHHHcCcccC
Confidence            9999999999999999999999999999999999986543332221  23344567888999999999999999998889


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      +++|+.+.+|||+++
T Consensus       230 ~~~G~~~~~~~g~~~  244 (245)
T PRK07060        230 MVSGVSLPVDGGYTA  244 (245)
T ss_pred             CccCcEEeECCCccC
Confidence            999999999999875

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.9e-39  Score=269.46  Aligned_cols=246  Identities=38%  Similarity=0.515  Sum_probs=219.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++++|+++||||+++||++++++|+++|++|+++ +|+.+..++..+.+...+.++.++.+|++|+++++++++++.+.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999998 99998888888887776678999999999999999999999998


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++||++|.....++.+.+.++|++.+++|+.+++++++.+.+.|.+++.+++|++||..+..+.+....|+.+|
T Consensus        81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  159 (247)
T PRK05565         81 F-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK  159 (247)
T ss_pred             h-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence            8 789999999998866677788999999999999999999999999999888788999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.+++.++.++..+|+++++++||+++|++.+..... ..   .......+..+..+++++++.+++++++....++
T Consensus       160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (247)
T PRK05565        160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE-DK---EGLAEEIPLGRLGKPEEIAKVVLFLASDDASYIT  235 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH-HH---HHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCcc
Confidence            9999999999999999999999999999999887654322 11   1222245667788999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.+.+|+|+++
T Consensus       236 g~~~~~~~~~~~  247 (247)
T PRK05565        236 GQIITVDGGWTC  247 (247)
T ss_pred             CcEEEecCCccC
Confidence            999999999874

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.6e-39  Score=269.97  Aligned_cols=242  Identities=29%  Similarity=0.425  Sum_probs=210.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++|||++++||+++++.|+++|++|++++|+++++++..+++...+.++.++++|++++++++++++.+.+.+ 
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF-   80 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999999999998888888887777788999999999999999999998887 


Q ss_pred             CcccEEEeccccccccC--------C-CCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCCCCCCCC
Q 024551           95 GKLNILVNNAALVVMKR--------A-TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAGAISIPR  164 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~--------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~  164 (266)
                      +++|++|||+|......        + .+.+.++|+.++++|+.+++++++.++|.|.++ ..++||++||.. ..+.++
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~  159 (253)
T PRK08217         81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMG  159 (253)
T ss_pred             CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCC
Confidence            78999999999754322        2 567889999999999999999999999999765 457899998875 457778


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      ...|+++|+++++++++++.++.++||++++++||+++|++.....+ ..   ........|.++..+|+|+++.+.||+
T Consensus       160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~a~~~~~l~  235 (253)
T PRK08217        160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKP-EA---LERLEKMIPVGRLGEPEEIAHTVRFII  235 (253)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCH-HH---HHHHHhcCCcCCCcCHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999998754322 11   233344568888999999999999999


Q ss_pred             cCCCCCccccEEEeCCCccC
Q 024551          245 LPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +  ..+++|+.+.+|||+++
T Consensus       236 ~--~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        236 E--NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             c--CCCcCCcEEEeCCCccC
Confidence            5  46899999999999875

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-39  Score=270.72  Aligned_cols=232  Identities=23%  Similarity=0.306  Sum_probs=203.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCC--HHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSF--GDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~--~~~i~~~~~~~~~   91 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.+.+ ..+.++++|+++  .+++.++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            3788999999999999999999999999999999999999888888886543 467788999986  5789999999988


Q ss_pred             hcCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           92 VFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      .+.+++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.+++|+++|..+..+.+.+..|++
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  162 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGA  162 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHH
Confidence            77457999999999753 35678889999999999999999999999999998877789999999999989888999999


Q ss_pred             hHHHHHHHHHHHHHHhccC-CcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          171 SKGAINQLTKNLACEWATD-SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~-gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      ||++++.|++.++.|+.++ +|||+.|+||+++|++.....+...            ..+..+++|+++.++|++++++.
T Consensus       163 sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~  230 (239)
T PRK08703        163 SKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA------------KSERKSYGDVLPAFVWWASAESK  230 (239)
T ss_pred             hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC------------ccccCCHHHHHHHHHHHhCcccc
Confidence            9999999999999999987 6999999999999998665432211            11356899999999999999999


Q ss_pred             CccccEEEe
Q 024551          250 YITGQVISI  258 (266)
Q Consensus       250 ~~~G~~l~v  258 (266)
                      ++||++|.|
T Consensus       231 ~~~g~~~~~  239 (239)
T PRK08703        231 GRSGEIVYL  239 (239)
T ss_pred             CcCCeEeeC
Confidence            999999875

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-39  Score=270.12  Aligned_cols=246  Identities=33%  Similarity=0.455  Sum_probs=214.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEE-ecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++||||+++||++++++|+++|++|++ ..|+.+.+++..+.+...+.++.++++|++|++++.++++++.+.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999977 4788888888777776666678899999999999999999998876


Q ss_pred             C-----CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           94 D-----GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        94 ~-----~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      +     +++|++|||||....+.+.+.+.+.|++.+++|+.+++++++.+++.|.+.  +++|++||..+..+.+++..|
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~~~~~Y  160 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFTGSIAY  160 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCCCCcch
Confidence            2     369999999998777778888999999999999999999999999998653  699999999988888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +.+|+++++++++++.++.++|++|+.++||+++|++...........  .......+.++..+++|+++.+.+++++..
T Consensus       161 ~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  238 (254)
T PRK12746        161 GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIR--NFATNSSVFGRIGQVEDIADAVAFLASSDS  238 (254)
T ss_pred             HhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHH--HHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999999999876543322211  222344567888899999999999999887


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      .+++|+.+.++||.++
T Consensus       239 ~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        239 RWVTGQIIDVSGGFCL  254 (254)
T ss_pred             CCcCCCEEEeCCCccC
Confidence            8899999999999764

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.6e-39  Score=269.41  Aligned_cols=244  Identities=28%  Similarity=0.393  Sum_probs=210.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|+++||||+++||++++++|+++|++|++++|+. +..++..+.++..+.++.++++|+++++++.++++++.+.+ ++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence            48999999999999999999999999999999864 45566666666656789999999999999999999999998 78


Q ss_pred             ccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC------CCeEEEEecCCCCCCCCCchhh
Q 024551           97 LNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG------NASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        97 id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~------~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      +|++|||+|...  .+++.+.+.++|++.+++|+.+++++++.+.+.|.++.      .++||++||..+..+.+....|
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  160 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEY  160 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCccc
Confidence            999999999753  34677889999999999999999999999999998654      3579999999998888889999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +.+|++++++++.++.++.++||+|++++||++.|++...... ......  .....|++++.+|+|+++++.+++++..
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~d~a~~i~~l~~~~~  237 (256)
T PRK12745        161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA-KYDALI--AKGLVPMPRWGEPEDVARAVAALASGDL  237 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch-hHHhhh--hhcCCCcCCCcCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999987654321 111111  1124678889999999999999999888


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      .+++|+.+.+|||.+.+
T Consensus       238 ~~~~G~~~~i~gg~~~~  254 (256)
T PRK12745        238 PYSTGQAIHVDGGLSIP  254 (256)
T ss_pred             cccCCCEEEECCCeecc
Confidence            89999999999998764

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-39  Score=275.23  Aligned_cols=230  Identities=26%  Similarity=0.369  Sum_probs=197.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .++||+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++++|++|+++++++++++.+.+ 
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   81 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL-   81 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999999999999998888887777789999999999999999999999988 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|++|||||+...+++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+..+.++...|++||+
T Consensus        82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  161 (275)
T PRK05876         82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKY  161 (275)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHH
Confidence            7899999999998778888999999999999999999999999999998765 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh---HH-HHHHHHhc-CCCCCCCCccchHHHHHHHhc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL---VQ-EYVKLIAK-TPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~---~~-~~~~~~~~-~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ++.+|+++++.|+.++||+|++|+||+++|++.........   .. ........ .......+|+|+|+.++..+.
T Consensus       162 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        162 GVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999997654211000   00 00000001 112346789999999987774

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=7.3e-39  Score=301.72  Aligned_cols=253  Identities=27%  Similarity=0.322  Sum_probs=218.2

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ++...+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  ...+..+++|++|++++++++++
T Consensus       407 ~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~  486 (676)
T TIGR02632       407 PKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD  486 (676)
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence            4445688999999999999999999999999999999999998888887777643  23678899999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchh
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~  167 (266)
                      +.+.+ +++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+++.|++++ .++||++||..+..+.++...
T Consensus       487 i~~~~-g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~a  565 (676)
T TIGR02632       487 VALAY-GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASA  565 (676)
T ss_pred             HHHhc-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHH
Confidence            99998 7899999999987777788889999999999999999999999999998765 579999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccC--CCCCCCccc--------hhHHHHHHHHhcCCCCCCCCccchH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNT--QISPPDLND--------LLVQEYVKLIAKTPLARSAEPNEIS  237 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t--~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~eia  237 (266)
                      |++||+++++++++++.|++++|||||+|+||++.+  .+....+..        ........+....++++..+|+|+|
T Consensus       566 Y~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA  645 (676)
T TIGR02632       566 YSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIA  645 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHH
Confidence            999999999999999999999999999999999864  232211100        0111112244567899999999999


Q ss_pred             HHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          238 PLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ++++||+++...++||+++.+|||++-
T Consensus       646 ~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       646 EAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHHHHHhCCcccCCcCcEEEECCCchh
Confidence            999999998889999999999999864

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=266.59  Aligned_cols=241  Identities=37%  Similarity=0.502  Sum_probs=212.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC----ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR----DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ++++|+++||||+++||++++++|+++|++|++++|    +++..+++.+++...+.++.++.+|++|+++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            367899999999999999999999999999998654    5566666677776667789999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHH-HHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH-PLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      +.+ +++|++|||+|.....++.+.+.++|++.+++|+.+++++++++. +.|++++.+++|++||..+..+.+++..|+
T Consensus        83 ~~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~  161 (249)
T PRK12827         83 EEF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYA  161 (249)
T ss_pred             HHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhH
Confidence            887 689999999998877788888999999999999999999999999 677766678999999999998889999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      .+|++++.+++.++.++.++|++++.++||+++|++.......      .......|..+..+++|+++.+++++++...
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  235 (249)
T PRK12827        162 ASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT------EHLLNPVPVQRLGEPDEVAALVAFLVSDAAS  235 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH------HHHHhhCCCcCCcCHHHHHHHHHHHcCcccC
Confidence            9999999999999999999999999999999999986654321      2233456677788999999999999998889


Q ss_pred             CccccEEEeCCCc
Q 024551          250 YITGQVISIDGGY  262 (266)
Q Consensus       250 ~~~G~~l~vdgG~  262 (266)
                      +++|+.+.+|||+
T Consensus       236 ~~~g~~~~~~~g~  248 (249)
T PRK12827        236 YVTGQVIPVDGGF  248 (249)
T ss_pred             CccCcEEEeCCCC
Confidence            9999999999986

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=268.38  Aligned_cols=244  Identities=28%  Similarity=0.355  Sum_probs=211.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|+++||||+++||++++++|+++|++|++++|+.+.++++.+.+.  +.++.++++|++|++++.++++++.+++ +++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAER-GPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            5899999999999999999999999999999999988888777763  3468899999999999999999999988 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |++|||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.+++.++||++||..+.. ..+...|+.+|++++.
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~y~~sK~a~~~  157 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-ALGHPAYSAAKAGLIH  157 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-CCCCcccHHHHHHHHH
Confidence            999999998776777788999999999999999999999999999887788999999976654 3456799999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEE
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS  257 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~  257 (266)
                      ++++++.++.++||+|+.++||+++|++........ ...........|..++..++|+++++++|+++...+++|+.+.
T Consensus       158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~  236 (257)
T PRK07074        158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAAN-PQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLP  236 (257)
T ss_pred             HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEE
Confidence            999999999999999999999999998754322111 1111222335678899999999999999999888999999999


Q ss_pred             eCCCccCCC
Q 024551          258 IDGGYTAGN  266 (266)
Q Consensus       258 vdgG~~~~~  266 (266)
                      +|||++.++
T Consensus       237 ~~~g~~~~~  245 (257)
T PRK07074        237 VDGGLTAGN  245 (257)
T ss_pred             eCCCcCcCC
Confidence            999998753

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=3e-38  Score=264.68  Aligned_cols=247  Identities=35%  Similarity=0.449  Sum_probs=220.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   81 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF-   81 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            3678999999999999999999999999999999999988888888887777789999999999999999999999988 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y~~sK~  173 (266)
                      +++|++|||+|.....++.+.+.+++++.++.|+.+++.+++.++|.|.+++.++||++||..+. .+.+....|+.+|+
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~  161 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKA  161 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHH
Confidence            78999999999887777778899999999999999999999999999988778899999999988 78888899999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      +++++++.++.++.+.|++++.+.||++.|+..........   ........|.+++.+++|+++.+.+++.+...+++|
T Consensus       162 a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g  238 (251)
T PRK12826        162 GLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQW---AEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITG  238 (251)
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCC
Confidence            99999999999999999999999999999987655432211   123334568888999999999999999888889999


Q ss_pred             cEEEeCCCccCC
Q 024551          254 QVISIDGGYTAG  265 (266)
Q Consensus       254 ~~l~vdgG~~~~  265 (266)
                      +.+.+|||.++.
T Consensus       239 ~~~~~~~g~~~~  250 (251)
T PRK12826        239 QTLPVDGGATLP  250 (251)
T ss_pred             cEEEECCCccCC
Confidence            999999998864

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-39  Score=283.22  Aligned_cols=225  Identities=23%  Similarity=0.285  Sum_probs=200.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+.+ 
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~-   83 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL-   83 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC-
Confidence            4688999999999999999999999999999999999999999999988878889999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||+|....+++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.+....|+++|++
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a  163 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHA  163 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHH
Confidence            78999999999877778889999999999999999999999999999998878999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcc--CCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          175 INQLTKNLACEWAT--DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       175 l~~~~~~~a~el~~--~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +++|+++++.|+..  .+|+|+.|+||+++|++.....     .  .......|..+..+|||+|+.++++++..
T Consensus       164 ~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~-----~--~~~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        164 IRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWAR-----S--RLPVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhh-----h--hccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999975  4799999999999998754210     0  00011234567789999999999999754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=3.7e-38  Score=263.40  Aligned_cols=247  Identities=34%  Similarity=0.461  Sum_probs=216.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh-HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++++|+++|||++++||++++++|+++|++|+++.|+.+ ..+...+++...+.++.++.+|+++++++.++++++.+.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999987777654 456666767666778899999999999999999999998


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++||++|.....+..+.+.+++++.+++|+.+++.+.+.+.+.+.+.+.+++|++||..+..+.+....|+.+|
T Consensus        81 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk  159 (248)
T PRK05557         81 F-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASK  159 (248)
T ss_pred             c-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHH
Confidence            8 689999999998877777788999999999999999999999999999887778999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.+++.++.++..+|++++.++||+++|++..... ....   .......+.+++.+++|+++.+.+|+.+...+++
T Consensus       160 ~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  235 (248)
T PRK05557        160 AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP-EDVK---EAILAQIPLGRLGQPEEIASAVAFLASDEAAYIT  235 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC-hHHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence            99999999999999999999999999999998865432 1111   2334456778889999999999999988788999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      |+.+.+|||++++
T Consensus       236 g~~~~i~~~~~~~  248 (248)
T PRK05557        236 GQTLHVNGGMVMG  248 (248)
T ss_pred             ccEEEecCCccCC
Confidence            9999999999986

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=5.4e-39  Score=277.74  Aligned_cols=238  Identities=19%  Similarity=0.190  Sum_probs=199.2

Q ss_pred             EEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 024551           22 LVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNIL  100 (266)
Q Consensus        22 lItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~l  100 (266)
                      +||||++|||++++++|+++| ++|++++|+.+.++++.+++...+.++.++++|++|.++++++++++.+.+ +++|+|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence            699999999999999999999 999999999998888888776545678899999999999999999999877 789999


Q ss_pred             Eeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--CCeEEEEecCCCCCC----------------
Q 024551          101 VNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--NASIVFMSSVAGAIS----------------  161 (266)
Q Consensus       101 v~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~vss~~~~~~----------------  161 (266)
                      |||||+... .++.+.+.++|++.+++|+.+++++++.++|.|++++  .|+||++||..+..+                
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            999998643 3566789999999999999999999999999998775  589999999876421                


Q ss_pred             -------------------CCCchhhhhhHHHHHHHHHHHHHHhcc-CCcEEEEEecCcc-cCCCCCCCccchhHHHHHH
Q 024551          162 -------------------IPRLSAYAASKGAINQLTKNLACEWAT-DSIRVNAVSPWAV-NTQISPPDLNDLLVQEYVK  220 (266)
Q Consensus       162 -------------------~~~~~~y~~sK~al~~~~~~~a~el~~-~gi~v~~i~PG~v-~t~~~~~~~~~~~~~~~~~  220 (266)
                                         .+++..|+.||+|+..+++.++.++.+ +||+|++++||+| +|++.+.....  ......
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~--~~~~~~  237 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL--FRLLFP  237 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH--HHHHHH
Confidence                               124567999999999999999999975 6999999999999 78887543221  111111


Q ss_pred             HHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          221 LIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       221 ~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      .....+.++..+||+.|+.+++++++...+.+|+++..||+.
T Consensus       238 ~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        238 PFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            122345567889999999999999988888999999998863

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.5e-38  Score=268.15  Aligned_cols=223  Identities=22%  Similarity=0.272  Sum_probs=193.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++|+++||||++|||++++++|+++|++|++++|+++.++++.+      ..++++++|++|+++++++++++.+.+ ++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~   74 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS------LGVHPLSLDVTDEASIKAAVDTIIAEE-GR   74 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh------CCCeEEEeeCCCHHHHHHHHHHHHHhc-CC
Confidence            57999999999999999999999999999999999887655432      247789999999999999999999988 78


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|++|||||....+++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....|+++|++++
T Consensus        75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  154 (273)
T PRK06182         75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE  154 (273)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence            99999999998888888999999999999999999999999999999887899999999988888888889999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--------chhHH----HHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--------DLLVQ----EYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      +|+++++.|+.++||+|++|+||+++|++......        .....    .........+.++..+|+|+|+.+++++
T Consensus       155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~  234 (273)
T PRK06182        155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAV  234 (273)
T ss_pred             HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999997532110        00000    1122334457788999999999999999


Q ss_pred             cC
Q 024551          245 LP  246 (266)
Q Consensus       245 s~  246 (266)
                      +.
T Consensus       235 ~~  236 (273)
T PRK06182        235 TA  236 (273)
T ss_pred             hC
Confidence            74

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.7e-38  Score=262.27  Aligned_cols=245  Identities=31%  Similarity=0.352  Sum_probs=207.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++++|++|||||+++||++++++|+++|++|++..| +.+...+..+.+...+.++.++++|++++++++++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            5578999999999999999999999999999887665 455556666666666667889999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+.|.|++.  ++||++||..+..+.++...|+++|
T Consensus        82 ~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (252)
T PRK06077         82 Y-GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGLSIYGAMK  158 (252)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCCCCchHHHHHH
Confidence            8 789999999998777777888999999999999999999999999999763  7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ++++++++.++.++.+ +|+++.+.||+++|++.......  .....  ......+.+++.+|+|+|+.+++++..  ..
T Consensus       159 ~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~dva~~~~~~~~~--~~  233 (252)
T PRK06077        159 AAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKE--FAEKFTLMGKILDPEEVAEFVAAILKI--ES  233 (252)
T ss_pred             HHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHH--HHHhcCcCCCCCCHHHHHHHHHHHhCc--cc
Confidence            9999999999999988 89999999999999875332111  00111  111234566889999999999999953  46


Q ss_pred             ccccEEEeCCCccCCC
Q 024551          251 ITGQVISIDGGYTAGN  266 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~~  266 (266)
                      .+|+.+.+|+|+++.+
T Consensus       234 ~~g~~~~i~~g~~~~~  249 (252)
T PRK06077        234 ITGQVFVLDSGESLKG  249 (252)
T ss_pred             cCCCeEEecCCeeccC
Confidence            8999999999998753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.9e-38  Score=285.75  Aligned_cols=241  Identities=27%  Similarity=0.323  Sum_probs=207.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++||+++||||++|||++++++|+++|++|++++|..  +.++++.+++     ...++++|++|+++++++++.+.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999998843  3344443332     2357889999999999999999998


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||||+...+.+.+.+.++|++.+++|+.+++++.+.+.+.+..++.++||++||..+..+.+++..|+++|
T Consensus       282 ~-g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asK  360 (450)
T PRK08261        282 H-GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASK  360 (450)
T ss_pred             C-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHH
Confidence            8 789999999998877788889999999999999999999999999976555578999999999998999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++|+++++.++..+||++|+|+||+++|++...... . ..  .......++.+...|+|+++++.||+++...++|
T Consensus       361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~-~-~~--~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~it  436 (450)
T PRK08261        361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF-A-TR--EAGRRMNSLQQGGLPVDVAETIAWLASPASGGVT  436 (450)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch-h-HH--HHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCC
Confidence            999999999999999999999999999999988654211 1 11  1112235677888999999999999999999999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      |++|.+|||..++
T Consensus       437 G~~i~v~g~~~~~  449 (450)
T PRK08261        437 GNVVRVCGQSLLG  449 (450)
T ss_pred             CCEEEECCCcccC
Confidence            9999999998775

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-38  Score=259.98  Aligned_cols=232  Identities=28%  Similarity=0.348  Sum_probs=200.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++|+++||||+++||++++++|+++|++|++++|+.+..         .  ...++++|++|+++++++++++.+.+  +
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~D~~~~~~~~~~~~~~~~~~--~   68 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------F--PGELFACDLADIEQTAATLAQINEIH--P   68 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------c--CceEEEeeCCCHHHHHHHHHHHHHhC--C
Confidence            579999999999999999999999999999999987530         1  12467899999999999999998875  5


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|++|||+|.....++.+.+.++|++.+++|+.+++++.+.++|.|++++.++||++||.. ..+.+....|+++|++++
T Consensus        69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~  147 (234)
T PRK07577         69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALV  147 (234)
T ss_pred             CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHH
Confidence            8999999999877778888999999999999999999999999999988788999999985 456778899999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEE
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI  256 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l  256 (266)
                      +|+++++.|+.++||++++|+||+++|++.....+.... .........++++..+|+|+|..+++|+++...+++|+.+
T Consensus       148 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~  226 (234)
T PRK07577        148 GCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSE-EEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVL  226 (234)
T ss_pred             HHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchh-HHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEE
Confidence            999999999999999999999999999987543221111 1123344567888889999999999999988889999999


Q ss_pred             EeCCCcc
Q 024551          257 SIDGGYT  263 (266)
Q Consensus       257 ~vdgG~~  263 (266)
                      .+|||.+
T Consensus       227 ~~~g~~~  233 (234)
T PRK07577        227 GVDGGGS  233 (234)
T ss_pred             EecCCcc
Confidence            9999975

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.2e-39  Score=257.61  Aligned_cols=234  Identities=25%  Similarity=0.321  Sum_probs=197.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |+++||.+++||+.+|||++++++|+++|..+.++..+.+..+..++.-... ...+.|++||+++..++++.++++.++
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999888888888876666554333 458999999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC---CCeEEEEecCCCCCCCCCchhhh
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG---NASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      + |.+|++||+||+.        ++.+|++.+++|+.|.+.-+..++|+|.++.   +|-|||+||..+..|.|-.+.|+
T Consensus        81 f-g~iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~  151 (261)
T KOG4169|consen   81 F-GTIDILINGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYA  151 (261)
T ss_pred             h-CceEEEEcccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhh
Confidence            9 8999999999987        4567999999999999999999999998764   67899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHH--hccCCcEEEEEecCcccCCCCCCCcc----chhHHHHHHHHhcCCCCCCCCccchHHHHHHH
Q 024551          170 ASKGAINQLTKNLACE--WATDSIRVNAVSPWAVNTQISPPDLN----DLLVQEYVKLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       170 ~sK~al~~~~~~~a~e--l~~~gi~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      +||+++.+|+|+++..  |.+.|||++++|||+++|.+....-.    .+............|   ..+|++++..++-.
T Consensus       152 AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~---~q~~~~~a~~~v~a  228 (261)
T KOG4169|consen  152 ASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP---KQSPACCAINIVNA  228 (261)
T ss_pred             hcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc---cCCHHHHHHHHHHH
Confidence            9999999999999886  66789999999999999976544311    111111122233333   45789999999988


Q ss_pred             hcCCCCCccccEEEeCCCc
Q 024551          244 CLPAASYITGQVISIDGGY  262 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~  262 (266)
                      +..   ..||+.+.+|.|.
T Consensus       229 iE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  229 IEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             Hhh---ccCCcEEEEecCc
Confidence            854   5899999999986

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=3.1e-37  Score=258.10  Aligned_cols=240  Identities=31%  Similarity=0.397  Sum_probs=208.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEE-ecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |+++||||+++||++++++|+++|++|++ ..|+.+..++..+++...+..+.++++|++|+++++++++++.+.+ +++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence            68999999999999999999999999976 5788888888888877767788899999999999999999999887 789


Q ss_pred             cEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC---CCeEEEEecCCCCCCCCC-chhhhhhH
Q 024551           98 NILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG---NASIVFMSSVAGAISIPR-LSAYAASK  172 (266)
Q Consensus        98 d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~-~~~y~~sK  172 (266)
                      |++|||+|.. ...++.+.+.++|+..+++|+.+++++++.+++.|.++.   .|+||++||..+..+.+. +..|+++|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            9999999976 445677889999999999999999999999999987652   578999999988887775 46899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.+++.++.++.++||++++++||++.|++........   .........|+.+..+|+|+++.++|++++...+++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~  237 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPG---RVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVT  237 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCcc
Confidence            99999999999999999999999999999999754322211   112334456788888999999999999998888999


Q ss_pred             ccEEEeCCCc
Q 024551          253 GQVISIDGGY  262 (266)
Q Consensus       253 G~~l~vdgG~  262 (266)
                      |+++.+|||.
T Consensus       238 g~~~~~~g~~  247 (247)
T PRK09730        238 GSFIDLAGGK  247 (247)
T ss_pred             CcEEecCCCC
Confidence            9999999973

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=4.4e-37  Score=256.60  Aligned_cols=245  Identities=35%  Similarity=0.479  Sum_probs=218.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++.+|+++||||+++||+.++++|+++|++|++++|+++..+...+++...+.++.++.+|++|++++.++++++.+.+ 
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF-   80 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            5678999999999999999999999999999999999998888888887777889999999999999999999998887 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++||++|.....+..+.+.++|++.++.|+.+++++++.+.|+|.+.+.++||++||..+..+.+....|+.+|++
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~  160 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAG  160 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHH
Confidence            78999999999877777778899999999999999999999999999988777899999999888888889999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      ++.++++++.++.+.|++++.++||.+.+++..... ...   ........|.+++.+++|+++.+.+++++...+++|+
T Consensus       161 ~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~  236 (246)
T PRK05653        161 VIGFTKALALELASRGITVNAVAPGFIDTDMTEGLP-EEV---KAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQ  236 (246)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh-HHH---HHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCC
Confidence            999999999999999999999999999998764311 111   1223345677888999999999999999888899999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      ++.+|||.++
T Consensus       237 ~~~~~gg~~~  246 (246)
T PRK05653        237 VIPVNGGMYM  246 (246)
T ss_pred             EEEeCCCeeC
Confidence            9999999864

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-37  Score=269.68  Aligned_cols=239  Identities=22%  Similarity=0.244  Sum_probs=192.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.    .+.++++|++|.++++++++++.+.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999999999988887777663    37789999999999999999999887


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC------------C
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI------------S  161 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~------------~  161 (266)
                       +++|+||||||....  ..+.+.++|+..+++|+.+++++++.++|.|++++.++||++||..+..            +
T Consensus        98 -~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~  174 (315)
T PRK06196         98 -RRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG  174 (315)
T ss_pred             -CCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence             789999999997643  2345678899999999999999999999999887778999999976532            3


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHH-HHHHHHhcCCCC-CCCCccchHHH
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ-EYVKLIAKTPLA-RSAEPNEISPL  239 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~eia~~  239 (266)
                      .+++..|+.||++++.|++.++.++.++||+|++|+||+++|++........... .+.. ....++. +..+|+|+|..
T Consensus       175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~  253 (315)
T PRK06196        175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVD-EHGNPIDPGFKTPAQGAAT  253 (315)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhh-hhhhhhhhhcCCHhHHHHH
Confidence            3456789999999999999999999999999999999999999865432211110 0111 0112332 57899999999


Q ss_pred             HHHHhcCCCCCccccEEEeCC
Q 024551          240 VAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       240 ~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      ++||++......+|..+..|.
T Consensus       254 ~~~l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        254 QVWAATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             HHHHhcCCccCCCCCeEeCCC
Confidence            999997544333444444443

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=257.60  Aligned_cols=229  Identities=23%  Similarity=0.339  Sum_probs=195.8

Q ss_pred             EEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEEE
Q 024551           22 LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILV  101 (266)
Q Consensus        22 lItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv  101 (266)
                      +||||+++||++++++|+++|++|++++|+++.+++..+++++ +.+++++.+|++|+++++++++++     +++|++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~id~li   74 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEA-----GPFDHVV   74 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhc-----CCCCEEE
Confidence            6999999999999999999999999999999888877777753 567889999999999999988763     6899999


Q ss_pred             eccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHHHHH
Q 024551          102 NNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN  181 (266)
Q Consensus       102 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~~~  181 (266)
                      ||+|....+++.+.+.++|++++++|+.+++++++  .+.|.  +.|+||++||..+..+.+....|+.+|+++++++|+
T Consensus        75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            99998777778888999999999999999999999  44453  358999999999999999999999999999999999


Q ss_pred             HHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCC
Q 024551          182 LACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       182 ~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      ++.|+..  |||++++||+++|++....................|.++..+|+|+|++++||+++  .+++|+.+.+|||
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gg  226 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDGG  226 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCCC
Confidence            9999975  99999999999998865432221111122334556788899999999999999974  6899999999999


Q ss_pred             ccC
Q 024551          262 YTA  264 (266)
Q Consensus       262 ~~~  264 (266)
                      ..+
T Consensus       227 ~~~  229 (230)
T PRK07041        227 HAI  229 (230)
T ss_pred             eec
Confidence            865

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-37  Score=257.24  Aligned_cols=229  Identities=27%  Similarity=0.343  Sum_probs=201.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++|+++||||+++||++++++|+++|++|++++|+++..+++.+.+.+.+.++.++++|++|++++.++++++.+.+ ++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            46899999999999999999999999999999999988888888887767789999999999999999999999988 78


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|++|||+|.....++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||..+..+.+++..|+.+|++++
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~  163 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA  163 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence            99999999987777778889999999999999999999999999998877799999999999888899999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEE
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI  256 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l  256 (266)
                      .++++++.++.++||++++|.||+++|++.......          ......+..+|+|+|+++++++++...++.+..-
T Consensus       164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~----------~~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~~  233 (241)
T PRK07454        164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ----------ADFDRSAMLSPEQVAQTILHLAQLPPSAVIEDLT  233 (241)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc----------cccccccCCCHHHHHHHHHHHHcCCccceeeeEE
Confidence            999999999999999999999999999985432110          0011235678999999999999976665555543

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-37  Score=263.77  Aligned_cols=243  Identities=22%  Similarity=0.258  Sum_probs=206.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCe-eEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK-VTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.. ..++++|++|+++++++++++.+.+ +++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence            58999999999999999999999999999999999888888887765543 4567899999999999999999988 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      |++|||+|....+.+.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+..+.+....|+++|++++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  159 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR  159 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence            9999999987777788899999999999999999999999999997643 589999999998888899999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc---hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND---LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      +|+++++.|+..+||+|+.|+||+++|++..+....   ........... ...++..+|+|+|+.+++++. ...++++
T Consensus       160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vA~~~~~~~~-~~~~~~~  237 (272)
T PRK07832        160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-RFRGHAVTPEKAAEKILAGVE-KNRYLVY  237 (272)
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-hcccCCCCHHHHHHHHHHHHh-cCCeEEe
Confidence            999999999999999999999999999986542110   00010111111 234567899999999999995 5688999


Q ss_pred             cEEEeCCCccC
Q 024551          254 QVISIDGGYTA  264 (266)
Q Consensus       254 ~~l~vdgG~~~  264 (266)
                      +.+.+++|+.+
T Consensus       238 ~~~~~~~~~~~  248 (272)
T PRK07832        238 TSPDIRALYWF  248 (272)
T ss_pred             cCcchHHHHHH
Confidence            98888888654

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-37  Score=262.59  Aligned_cols=216  Identities=26%  Similarity=0.351  Sum_probs=194.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.    ++.++++|++|+++++++++++.+.+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL   76 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999998887776653    57788999999999999999999988


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||||....+++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|++||+
T Consensus        77 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  155 (273)
T PRK07825         77 -GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKH  155 (273)
T ss_pred             -CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHH
Confidence             7899999999998878888889999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ++++|+++++.|+.++||+|+.|+||+++|++......             .......+|+|+|+.+++++.+.
T Consensus       156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-------------~~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        156 AVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-------------AKGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-------------ccCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999987654211             01124578999999999998654

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.5e-37  Score=288.39  Aligned_cols=235  Identities=25%  Similarity=0.246  Sum_probs=204.3

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ....+++++++||||++|||++++++|+++|++|++++|+.+.++++.++++..+.++.++++|++|+++++++++++.+
T Consensus       309 ~~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        309 PRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             ccccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34567889999999999999999999999999999999999999999998887777899999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      .+ +++|++|||||+...+++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||.++..+.++...|++
T Consensus       389 ~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  467 (582)
T PRK05855        389 EH-GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYAT  467 (582)
T ss_pred             hc-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHH
Confidence            88 7899999999998878888899999999999999999999999999998875 589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch----hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL----LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      ||+++++|+++++.|+.++||+|++|+||+++|++........    ............+..+..+|||+|+.+++.+..
T Consensus       468 sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~  547 (582)
T PRK05855        468 SKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKR  547 (582)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999876532110    011111112222334556899999999999965


Q ss_pred             C
Q 024551          247 A  247 (266)
Q Consensus       247 ~  247 (266)
                      .
T Consensus       548 ~  548 (582)
T PRK05855        548 N  548 (582)
T ss_pred             C
Confidence            3

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-37  Score=254.96  Aligned_cols=236  Identities=31%  Similarity=0.423  Sum_probs=207.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +.+++|++||||++++||++++++|+++|++|++++|+++...+..+++...  .+..+.+|++|.++++++++++.+.+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQF   80 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999988777766666543  45677899999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++||++|......+.+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..+.+....|+.+|+
T Consensus        81 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~  159 (239)
T PRK12828         81 -GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKA  159 (239)
T ss_pred             -CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHH
Confidence             7899999999987666677779999999999999999999999999998877899999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      +++.+++.++.++..+||+++.+.||++.|++.......            .++.++.+++|+++.+++++++...+++|
T Consensus       160 a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~------------~~~~~~~~~~dva~~~~~~l~~~~~~~~g  227 (239)
T PRK12828        160 GVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD------------ADFSRWVTPEQIAAVIAFLLSDEAQAITG  227 (239)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc------------hhhhcCCCHHHHHHHHHHHhCcccccccc
Confidence            999999999999998999999999999999854332211            12334678999999999999987788999


Q ss_pred             cEEEeCCCccC
Q 024551          254 QVISIDGGYTA  264 (266)
Q Consensus       254 ~~l~vdgG~~~  264 (266)
                      +.+.+|||+++
T Consensus       228 ~~~~~~g~~~~  238 (239)
T PRK12828        228 ASIPVDGGVAL  238 (239)
T ss_pred             eEEEecCCEeC
Confidence            99999999876

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-37  Score=264.28  Aligned_cols=224  Identities=23%  Similarity=0.310  Sum_probs=194.3

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ..++.+.+++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|++++.+++++
T Consensus        31 ~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~  110 (293)
T PRK05866         31 PPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVAD  110 (293)
T ss_pred             CCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            33456778999999999999999999999999999999999999999998888877677888999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCC--CHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-CCCCc
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEY--TLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-SIPRL  165 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-~~~~~  165 (266)
                      +.+.+ +++|++|||||.....++.+.  +++++++.+++|+.+++.+++.++|+|++++.|+||++||.++.. +.+..
T Consensus       111 ~~~~~-g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~  189 (293)
T PRK05866        111 VEKRI-GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLF  189 (293)
T ss_pred             HHHHc-CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCc
Confidence            99988 789999999998766555442  468899999999999999999999999988889999999976654 36778


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ..|+++|+|+++|+++++.|+.++||+|++++||+++|++.......            ... ...+||++|+.++..+.
T Consensus       190 ~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~------------~~~-~~~~pe~vA~~~~~~~~  256 (293)
T PRK05866        190 SVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY------------DGL-PALTADEAAEWMVTAAR  256 (293)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc------------cCC-CCCCHHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999987542110            011 23589999999988885


Q ss_pred             C
Q 024551          246 P  246 (266)
Q Consensus       246 ~  246 (266)
                      .
T Consensus       257 ~  257 (293)
T PRK05866        257 T  257 (293)
T ss_pred             c
Confidence            4

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-37  Score=260.05  Aligned_cols=238  Identities=23%  Similarity=0.253  Sum_probs=201.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+|+++||||+++||++++++|+++|++|++++|+++.++++.+.+   +..+.++++|++|+++++++++++.+.+ ++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   77 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHF-GR   77 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            4789999999999999999999999999999999988877665543   4468889999999999999999999988 78


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|++|||||....+++.+.+.++|++.+++|+.+++++++.++|+|++++.++||++||..+..+.+....|+.+|++++
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~  157 (275)
T PRK08263         78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE  157 (275)
T ss_pred             CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence            99999999998888888999999999999999999999999999998877789999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-----chhHHHHHHHHhcCCCCCC-CCccchHHHHHHHhcCCCCC
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-----DLLVQEYVKLIAKTPLARS-AEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~eia~~~~~l~s~~~~~  250 (266)
                      ++++.++.++.+.||+|+.++||+++|++......     ..............+.++. .+|+|+++.+++++...  .
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~--~  235 (275)
T PRK08263        158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAE--N  235 (275)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCC--C
Confidence            99999999999999999999999999998743211     1111111223334466677 89999999999999753  2


Q ss_pred             ccccEEEeCC
Q 024551          251 ITGQVISIDG  260 (266)
Q Consensus       251 ~~G~~l~vdg  260 (266)
                      .+++++...+
T Consensus       236 ~~~~~~~~~~  245 (275)
T PRK08263        236 PPLRLFLGSG  245 (275)
T ss_pred             CCeEEEeCch
Confidence            3556555443

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-36  Score=251.83  Aligned_cols=244  Identities=36%  Similarity=0.514  Sum_probs=213.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++.|++|||||+++||++++++|+++|++|++..| +....+.+.+.+...+.++.++.+|++|+++++++++++.+.+ 
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   82 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF-   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc-
Confidence            56789999999999999999999999999877555 4555566666666667789999999999999999999998887 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++||++|.....++.+.+.++|++.+++|+.+++++++.+.+++++.+.+++|++||..+..+.+....|+.+|++
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~  162 (249)
T PRK12825         83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAG  162 (249)
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHH
Confidence            78999999999877777888899999999999999999999999999988878899999999999888889999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      ++++++.++.++.+.|++++.++||++.|++...........    .....|..++.+++|+++.+.+++++...+.+|+
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~  238 (249)
T PRK12825        163 LVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREA----KDAETPLGRSGTPEDIARAVAFLCSDASDYITGQ  238 (249)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHh----hhccCCCCCCcCHHHHHHHHHHHhCccccCcCCC
Confidence            999999999999999999999999999999876543322111    1224677889999999999999998888899999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      ++.++||...
T Consensus       239 ~~~i~~g~~~  248 (249)
T PRK12825        239 VIEVTGGVDV  248 (249)
T ss_pred             EEEeCCCEee
Confidence            9999999864

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=1e-36  Score=241.20  Aligned_cols=246  Identities=24%  Similarity=0.315  Sum_probs=214.6

Q ss_pred             ccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ..++||+.||+|-.  +.|+..||+.|.++|+++.++..++ ++++-++++.+.-+...+++||+++.++++++++++.+
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            46899999999954  7999999999999999999999887 55555555544433467899999999999999999999


Q ss_pred             hcCCcccEEEecccccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh
Q 024551           92 VFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      .+ +++|+|||+.++..    .+++.+.+.|.|...+++..+|...+++++.|.|..  +|.||.++=..+....|++..
T Consensus        81 ~~-g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNv  157 (259)
T COG0623          81 KW-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNV  157 (259)
T ss_pred             hh-CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCch
Confidence            99 89999999999875    467888999999999999999999999999999977  579999999988899999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      .+.+|++|++-+|.+|.+++++|||||+|+-||++|--.....  .....+.......|++|..++|||+++.+||+||-
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~--~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdL  235 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIG--DFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDL  235 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccc--cHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcch
Confidence            9999999999999999999999999999999999994333221  12223344566789999999999999999999999


Q ss_pred             CCCccccEEEeCCCccCC
Q 024551          248 ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~~  265 (266)
                      ++.+||+++.||+|+++-
T Consensus       236 ssgiTGei~yVD~G~~i~  253 (259)
T COG0623         236 SSGITGEIIYVDSGYHIM  253 (259)
T ss_pred             hcccccceEEEcCCceee
Confidence            999999999999999863

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-36  Score=254.87  Aligned_cols=232  Identities=29%  Similarity=0.369  Sum_probs=204.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCC--CHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLS--FGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~--~~~~i~~~~~~~~~   91 (266)
                      .+++|+++|||++++||.+++++|+++|++|++++|+.+.++++.+++.+.+ .++.++.+|++  ++++++++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999998888888887653 46777788886  78999999999999


Q ss_pred             hcCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           92 VFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      .+ +++|++|||||... ..++.+.+.+.|++.+++|+.+++++++.++|+|.+++.++||++||..+..+.+.+..|++
T Consensus        89 ~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  167 (247)
T PRK08945         89 QF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAV  167 (247)
T ss_pred             Hh-CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHH
Confidence            88 78999999999764 34667788999999999999999999999999999888899999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||++++.+++.++.++..+||++++++||+++|++....+...            ...++.+|+|+++.++|++++...+
T Consensus       168 sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~  235 (247)
T PRK08945        168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE------------DPQKLKTPEDIMPLYLYLMGDDSRR  235 (247)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc------------cccCCCCHHHHHHHHHHHhCccccc
Confidence            9999999999999999999999999999999998754433221            1246789999999999999999999


Q ss_pred             ccccEEEeC
Q 024551          251 ITGQVISID  259 (266)
Q Consensus       251 ~~G~~l~vd  259 (266)
                      ++|+.+...
T Consensus       236 ~~g~~~~~~  244 (247)
T PRK08945        236 KNGQSFDAQ  244 (247)
T ss_pred             cCCeEEeCC
Confidence            999987643

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-36  Score=255.83  Aligned_cols=247  Identities=38%  Similarity=0.526  Sum_probs=212.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ..+++|+++||||+++||++++++|+++|++|++++|+++..+++.++..+.  ++.++.+|++|+++++++++++.+.+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERF   84 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3478999999999999999999999999999999999988877776665432  67889999999999999999999988


Q ss_pred             CCcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC-CeEEEEecCCCCCCCCCchhhhhh
Q 024551           94 DGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        94 ~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                       +++|++||++|.. ......+.+.++|++.+++|+.+++++++.+++.|...+. ++|+++||..+..+.+.+..|+.+
T Consensus        85 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~  163 (264)
T PRK12829         85 -GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAAS  163 (264)
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHH
Confidence             7899999999987 5556778899999999999999999999999999887665 789999998888888889999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-------hhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-------LLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      |++++.+++.++.++...+++++++.||+++|++.......       .............|.+++.+++|+++++++++
T Consensus       164 K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  243 (264)
T PRK12829        164 KWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLA  243 (264)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            99999999999999998899999999999999875433211       11111223344567778999999999999999


Q ss_pred             cCCCCCccccEEEeCCCcc
Q 024551          245 LPAASYITGQVISIDGGYT  263 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++...+++|+.+.+|||..
T Consensus       244 ~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        244 SPAARYITGQAISVDGNVE  262 (264)
T ss_pred             CccccCccCcEEEeCCCcc
Confidence            8777789999999999975

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-36  Score=286.36  Aligned_cols=250  Identities=30%  Similarity=0.403  Sum_probs=219.9

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ...++||+++||||+++||++++++|+++|++|++++|+.+.++...+++... .++.++.+|++|+++++++++++.+.
T Consensus       417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            33468999999999999999999999999999999999999888888777654 57889999999999999999999998


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC-CeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      + +++|++|||||....+++.+.+.++|++.+++|+.+++.+++.+++.|++++. |+||++||..+..+.++...|+++
T Consensus       496 ~-g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~as  574 (681)
T PRK08324        496 F-GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAA  574 (681)
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHH
Confidence            8 78999999999988888888999999999999999999999999999988764 899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcc--cCCCCCCCccch-------hHHH-HHHHHhcCCCCCCCCccchHHHHH
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAV--NTQISPPDLNDL-------LVQE-YVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v--~t~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      |++++++++.++.+++++||+||.|+||++  .|++..+.+...       ...+ ........++++...++|+|++++
T Consensus       575 Kaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~  654 (681)
T PRK08324        575 KAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVV  654 (681)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHH
Confidence            999999999999999999999999999999  887654432110       0111 123445678889999999999999


Q ss_pred             HHhcCCCCCccccEEEeCCCccC
Q 024551          242 FLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +++++...+.+|+.+++|||...
T Consensus       655 ~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        655 FLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHhCccccCCcCCEEEECCCchh
Confidence            99987788999999999999764

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-36  Score=257.26  Aligned_cols=227  Identities=21%  Similarity=0.219  Sum_probs=193.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+|+++||||++|||++++++|+++|++|++++|+++.++.+.+.   .+.++.++++|++|++++.++++.+.+.+ ++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-~~   78 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATF-GP   78 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            478999999999999999999999999999999998877655443   24578889999999999999999999988 78


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|++|||||....++..+.+.++|++.+++|+.+++++++.++|+|++++.++||++||.++..+.+++..|+++|++++
T Consensus        79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~  158 (277)
T PRK06180         79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE  158 (277)
T ss_pred             CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence            99999999988777888899999999999999999999999999999887789999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc------hhHH---HHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND------LLVQ---EYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +++++++.++.+.|++|++|+||+++|++....+..      ....   .........+..++.+|+|+|+.+++++...
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999875432211      1111   1111122345567789999999999998654

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-36  Score=254.22  Aligned_cols=234  Identities=18%  Similarity=0.240  Sum_probs=199.3

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++..+|+++||||+++||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|++++.++++++.+.
T Consensus         5 ~~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          5 EPHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            34567899999999999999999999999999999999988888777777766778899999999999999999999888


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||||........+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.+....|+.+|
T Consensus        85 ~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (274)
T PRK07775         85 L-GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAK  163 (274)
T ss_pred             c-CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHH
Confidence            8 789999999998777777788999999999999999999999999999877778999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHH--HHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ++++++++.++.++...||++++++||+++|++...............  ........++..++|+|++++++++..
T Consensus       164 ~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        164 AGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999986543222111111111  111223467889999999999999743

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-36  Score=261.66  Aligned_cols=241  Identities=20%  Similarity=0.189  Sum_probs=191.3

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++++|++|.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999998888888654  3468899999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC---------
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS---------  161 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~---------  161 (266)
                      +.+ +++|+||||||+... +..+.+.++|+..+++|+.+++++++.++|.|++. .++||++||..+..+         
T Consensus        89 ~~~-~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~  165 (313)
T PRK05854         89 AEG-RPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNW  165 (313)
T ss_pred             HhC-CCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccc
Confidence            988 789999999998653 33456788999999999999999999999999865 589999999876543         


Q ss_pred             ---CCCchhhhhhHHHHHHHHHHHHHHh--ccCCcEEEEEecCcccCCCCCCCcc--c---hhHHHHHHHHhcCCCCCCC
Q 024551          162 ---IPRLSAYAASKGAINQLTKNLACEW--ATDSIRVNAVSPWAVNTQISPPDLN--D---LLVQEYVKLIAKTPLARSA  231 (266)
Q Consensus       162 ---~~~~~~y~~sK~al~~~~~~~a~el--~~~gi~v~~i~PG~v~t~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~  231 (266)
                         ++++..|+.||+|+.+|++.++.++  ..+||+||+++||+++|++......  .   .............. ....
T Consensus       166 ~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  244 (313)
T PRK05854        166 ERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARG-FLVG  244 (313)
T ss_pred             cccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcc-cccC
Confidence               3456789999999999999999864  4678999999999999998754211  0   00101111111011 0235


Q ss_pred             CccchHHHHHHHhcCCCCCccccEEEe
Q 024551          232 EPNEISPLVAFLCLPAASYITGQVISI  258 (266)
Q Consensus       232 ~~~eia~~~~~l~s~~~~~~~G~~l~v  258 (266)
                      ++++.+...++++.+.. ..+|.++.-
T Consensus       245 ~~~~ga~~~l~~a~~~~-~~~g~~~~~  270 (313)
T PRK05854        245 TVESAILPALYAATSPD-AEGGAFYGP  270 (313)
T ss_pred             CHHHHHHHhhheeeCCC-CCCCcEECC
Confidence            78999999999886432 235766543

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-36  Score=256.65  Aligned_cols=226  Identities=22%  Similarity=0.259  Sum_probs=197.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++.+++.+.+.+ +++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            579999999999999999999999999999999999999888888777789999999999999999999999988 7899


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      ++|||+|....+.+.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|+++++|
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL  159 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence            99999999887888889999999999999999999999999999888778999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +++++.|+.++||+++.|+||+++|++...........  .............+++|+|+.++..+.+.
T Consensus       160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAM--KAQVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHhcccCcEEEEEecCccccCcccccccCchhH--HHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999876532211110  11111111223468999999999888653

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=7e-37  Score=265.42  Aligned_cols=214  Identities=22%  Similarity=0.264  Sum_probs=178.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ..||+++|||||+|||+++|++|+++|++|++++|+++.++++.+++.+.  +.++..+.+|+++  ++.+.++++.+.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            46999999999999999999999999999999999999999999988764  3478889999985  2333344444443


Q ss_pred             C-CcccEEEeccccccc--cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-C-CCCchhh
Q 024551           94 D-GKLNILVNNAALVVM--KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-S-IPRLSAY  168 (266)
Q Consensus        94 ~-~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-~-~~~~~~y  168 (266)
                      + .++|++|||||....  ..+.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||.++.. + .|....|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence            1 257799999998643  457788999999999999999999999999999988889999999998864 3 5788999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      ++||+++++|+++++.|+.++||+|++|+||+++|++......              .. ...+||++|+.++..+..
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~--------------~~-~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRS--------------SF-LVPSSDGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCC--------------CC-CCCCHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999998652100              00 135789999999888743

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-37  Score=255.95  Aligned_cols=238  Identities=21%  Similarity=0.223  Sum_probs=196.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC-c
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG-K   96 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~-~   96 (266)
                      |+++||||++|||++++++|+++|++|++++|++ +.++++.+   +.+.+++++++|++|+++++++++++.+.++. .
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            6899999999999999999999999999999987 44433322   23567889999999999999999998876521 1


Q ss_pred             c--cEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           97 L--NILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        97 i--d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      +  +++|+|+|... ..++.+.+.++|++.+++|+.+++++++.++|+|++. ..++||++||..+..+.+++..|+++|
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK  158 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence            2  28999999764 3567888999999999999999999999999999875 357999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhc--cCCcEEEEEecCcccCCCCCCCc--cchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          173 GAINQLTKNLACEWA--TDSIRVNAVSPWAVNTQISPPDL--NDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       173 ~al~~~~~~~a~el~--~~gi~v~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +++++|++.++.|++  +.||+|++|.||+++|++.....  ...............+.+++.+|+|+|+.+++++++. 
T Consensus       159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-  237 (251)
T PRK06924        159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-  237 (251)
T ss_pred             HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-
Confidence            999999999999976  46899999999999998754211  1111111223334457788999999999999999874 


Q ss_pred             CCccccEEEeCC
Q 024551          249 SYITGQVISIDG  260 (266)
Q Consensus       249 ~~~~G~~l~vdg  260 (266)
                      .+++|+.+.+|+
T Consensus       238 ~~~~G~~~~v~~  249 (251)
T PRK06924        238 DFPNGEVIDIDE  249 (251)
T ss_pred             cCCCCCEeehhh
Confidence            899999999986

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=3.3e-36  Score=253.00  Aligned_cols=246  Identities=33%  Similarity=0.428  Sum_probs=212.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+++.+++...+.++.++++|++|+++++++++++.+.+ +++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence            5799999999999999999999999999999999988888888877666789999999999999999999999887 679


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |++||++|........+.+.++++++++.|+.+++.+++.+++.|++.+.+++|++||..+..+.+.+..|+.+|+++++
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~  159 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG  159 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence            99999999877666777789999999999999999999999999988878899999999888888899999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-------HHHH-HHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-------VQEY-VKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +++.++.++...+|+++.++||++.|++.........       .... .......+.+.+.+++|+|+++++++++...
T Consensus       160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  239 (255)
T TIGR01963       160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAA  239 (255)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcccc
Confidence            9999999999889999999999999986432211100       0000 1122234556789999999999999987667


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      .++|+++.+|||++.
T Consensus       240 ~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       240 GITGQAIVLDGGWTA  254 (255)
T ss_pred             CccceEEEEcCcccc
Confidence            789999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=7.9e-37  Score=254.15  Aligned_cols=220  Identities=25%  Similarity=0.325  Sum_probs=184.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      |+++||||++|||++++++|+++|  +.|++..|+....      .  ...+++++++|++|+++++++.+    .+ ++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~~~~~~~~~Dls~~~~~~~~~~----~~-~~   67 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QHDNVQWHALDVTDEAEIKQLSE----QF-TQ   67 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--ccCceEEEEecCCCHHHHHHHHH----hc-CC
Confidence            579999999999999999999985  5666666655321      1  13578899999999999888543    34 68


Q ss_pred             ccEEEecccccc------ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC---CCCCchh
Q 024551           97 LNILVNNAALVV------MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI---SIPRLSA  167 (266)
Q Consensus        97 id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~---~~~~~~~  167 (266)
                      +|++|||+|...      ..++.+.+.+.|++.+++|+.+++.+++.++|.|++++.++|+++||..+..   +.+++..
T Consensus        68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~  147 (235)
T PRK09009         68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYS  147 (235)
T ss_pred             CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcch
Confidence            999999999864      2356678889999999999999999999999999887778999999865533   3466789


Q ss_pred             hhhhHHHHHHHHHHHHHHhcc--CCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          168 YAASKGAINQLTKNLACEWAT--DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~--~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      |+++|+++++|+++++.|+.+  ++|+|++|+||+++|++..+..            ...|.++..+|||+|+.++++++
T Consensus       148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~------------~~~~~~~~~~~~~~a~~~~~l~~  215 (235)
T PRK09009        148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ------------QNVPKGKLFTPEYVAQCLLGIIA  215 (235)
T ss_pred             hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh------------hccccCCCCCHHHHHHHHHHHHH
Confidence            999999999999999999987  6899999999999999865321            23466778899999999999999


Q ss_pred             CCCCCccccEEEeCCCcc
Q 024551          246 PAASYITGQVISIDGGYT  263 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~  263 (266)
                      +..++++|+++.+|||+.
T Consensus       216 ~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        216 NATPAQSGSFLAYDGETL  233 (235)
T ss_pred             cCChhhCCcEEeeCCcCC
Confidence            988899999999999985

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=258.43  Aligned_cols=225  Identities=21%  Similarity=0.235  Sum_probs=189.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+|+++||||++|||++++++|+++|++|++++|+++.++++.+    .  .+.++.+|++|+++++++++++.+.++++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E--GLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999999887665433    2  46788999999999999999998876568


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|++|||||....+++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+....|++||++++
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  156 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIE  156 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHH
Confidence            99999999988888888899999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc---------h-----hHHHHHHHHh-cCCCCCCCCccchHHHHH
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND---------L-----LVQEYVKLIA-KTPLARSAEPNEISPLVA  241 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~---------~-----~~~~~~~~~~-~~~~~~~~~~~eia~~~~  241 (266)
                      +|+++++.|+.++||+|++|+||+++|++.......         .     .......... ..+.....+||++|+.++
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  236 (277)
T PRK05993        157 GLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLL  236 (277)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence            999999999999999999999999999986542211         0     0000011111 112223468999999999


Q ss_pred             HHhcCC
Q 024551          242 FLCLPA  247 (266)
Q Consensus       242 ~l~s~~  247 (266)
                      ..+...
T Consensus       237 ~a~~~~  242 (277)
T PRK05993        237 HALTAP  242 (277)
T ss_pred             HHHcCC
Confidence            988643

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=5e-36  Score=259.82  Aligned_cols=241  Identities=19%  Similarity=0.178  Sum_probs=193.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .+|+++||||++|||++++++|+++| ++|++++|+.+.++++.+++...+.++.++.+|++|.++++++++++.+.+ +
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG-R   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence            47899999999999999999999999 999999999998888888876555678889999999999999999998887 7


Q ss_pred             cccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--CCeEEEEecCCCCCC-----------
Q 024551           96 KLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--NASIVFMSSVAGAIS-----------  161 (266)
Q Consensus        96 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~vss~~~~~~-----------  161 (266)
                      ++|++|||||+..+ .+..+.+.++|++++++|+.+++++++.++|+|++++  .|+||++||..+...           
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            89999999997543 2344668899999999999999999999999998764  489999999876421           


Q ss_pred             ----------------------CCCchhhhhhHHHHHHHHHHHHHHhc-cCCcEEEEEecCcc-cCCCCCCCccchhHHH
Q 024551          162 ----------------------IPRLSAYAASKGAINQLTKNLACEWA-TDSIRVNAVSPWAV-NTQISPPDLNDLLVQE  217 (266)
Q Consensus       162 ----------------------~~~~~~y~~sK~al~~~~~~~a~el~-~~gi~v~~i~PG~v-~t~~~~~~~~~~~~~~  217 (266)
                                            ..++..|++||+|+..+++.+++++. ++||+|++|+||++ +|++.......  ...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~--~~~  238 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPL--FRT  238 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHH--HHH
Confidence                                  12456799999999999999999985 46899999999999 69887543211  111


Q ss_pred             HHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCC
Q 024551          218 YVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       218 ~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      ..............+|++.++.+++++.+.....+|.++..++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       239 LFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             HHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            1111111122345789999999999887654445788776543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-36  Score=252.56  Aligned_cols=214  Identities=21%  Similarity=0.280  Sum_probs=187.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+ ++.++++|++|+++++++++++.+.+ +++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence            4799999999999999999999999999999999998888877775444 88999999999999999999999988 789


Q ss_pred             cEEEeccccccccCCC-CCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           98 NILVNNAALVVMKRAT-EYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      |++|||+|........ +.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.+....|++||++++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~  159 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAI  159 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHH
Confidence            9999999986543333 368899999999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      .|+++++.|+.++||+|++++||+++|++.....              .+.....+|+++++.++..+.+.
T Consensus       160 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------------~~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        160 KYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP--------------YPMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC--------------CCCCCccCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999998754311              11112457999999999888654

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-36  Score=261.04  Aligned_cols=242  Identities=22%  Similarity=0.210  Sum_probs=192.8

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ..++++||+++||||++|||+++|++|+++|++|++++|+.+..++..+++...  +.++.++++|++|.++++++++++
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            346689999999999999999999999999999999999998888777777543  357889999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC---------
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI---------  160 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~---------  160 (266)
                      .+.+ +++|++|||||.....  ...+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+..         
T Consensus        90 ~~~~-~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         90 RAAY-PRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             HhhC-CCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence            9988 7899999999976432  345678899999999999999999999999887778999999986443         


Q ss_pred             ----CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEE--ecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCcc
Q 024551          161 ----SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV--SPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPN  234 (266)
Q Consensus       161 ----~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i--~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (266)
                          +.++...|+.||+++++|++.++.+++.+|++|+++  +||+++|++.+... .. ........  .+. ...+++
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~-~~-~~~~~~~~--~~~-~~~~~~  241 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLP-RA-LRPVATVL--APL-LAQSPE  241 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCc-HH-HHHHHHHH--Hhh-hcCCHH
Confidence                234567899999999999999999999888877655  69999999876532 11 11111111  111 124567


Q ss_pred             chHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          235 EISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       235 eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      +.+...++++. ...+.+|.++..||+.
T Consensus       242 ~g~~~~~~~~~-~~~~~~g~~~~~~~~~  268 (306)
T PRK06197        242 MGALPTLRAAT-DPAVRGGQYYGPDGFG  268 (306)
T ss_pred             HHHHHHHHHhc-CCCcCCCeEEccCccc
Confidence            77777777665 4456789988877643

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-36  Score=252.81  Aligned_cols=222  Identities=25%  Similarity=0.346  Sum_probs=195.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++++|+++||||+++||++++++|+++|++|++++|+++.++++.+++ ..+.++.++++|++|+++++++++.+.+ +
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~   78 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M   78 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c
Confidence            4578999999999999999999999999999999999999888888777 4456889999999999999999999877 5


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||||.....++.+.+.+++++.+++|+.+++++++.++|+|.+++.++||+++|..+..+.++...|+.+|+
T Consensus        79 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  157 (263)
T PRK09072         79 -GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKF  157 (263)
T ss_pred             -CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHH
Confidence             7899999999987777788889999999999999999999999999998887789999999999889999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ++.+++++++.++.++||+|+.++||+++|++.......        . ......+..+|+|+|+.+++++...
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~--------~-~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        158 ALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA--------L-NRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc--------c-cccccCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999875432110        0 0111235678999999999999654

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-36  Score=252.46  Aligned_cols=237  Identities=27%  Similarity=0.275  Sum_probs=193.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+. +..+.+.++++..+.++.++++|++|+++++++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            36789999999999999999999999999999999975 45666777776666678899999999999999999999888


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-----CCCCCchhh
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-----ISIPRLSAY  168 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-----~~~~~~~~y  168 (266)
                       +++|++|||||......      .+++..+++|+.+++++++.+.|+|.+  .++||++||..+.     .+.+.+..|
T Consensus        83 -~~~d~vi~~ag~~~~~~------~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y  153 (248)
T PRK07806         83 -GGLDALVLNASGGMESG------MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPV  153 (248)
T ss_pred             -CCCcEEEECCCCCCCCC------CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHH
Confidence             68999999998643211      125578999999999999999999854  4799999996543     234556789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +.||++++.+++.++.+++.+||+|++|+||++.|++..............  ....|.+++.+|+|+|+.++|+++  .
T Consensus       154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~--~  229 (248)
T PRK07806        154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE--ARREAAGKLYTVSEFAAEVARAVT--A  229 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHH--HHHhhhcccCCHHHHHHHHHHHhh--c
Confidence            999999999999999999999999999999999987654322111111111  123577899999999999999996  4


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      .+++|+.+.++||..+
T Consensus       230 ~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        230 PVPSGHIEYVGGADYF  245 (248)
T ss_pred             cccCccEEEecCccce
Confidence            6889999999999764

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=253.51  Aligned_cols=242  Identities=22%  Similarity=0.260  Sum_probs=203.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++|+++||||+++||++++++|+++|++|++++|+.+.++++.+++...+  .++.++.+|++|++++++ ++++.+.+ 
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~-   79 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI-   79 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc-
Confidence            57999999999999999999999999999999999988888877766543  478899999999999999 99988888 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||+|....+...+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++...|+.+|++
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~  159 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYA  159 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHH
Confidence            78999999999887777888899999999999999999999999999988877899999999989999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--------hh-HHHHHHH--HhcCCCCCCCCccchHHHHHHH
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--------LL-VQEYVKL--IAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--------~~-~~~~~~~--~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      +++|+++++.++.++||+++.++||+++|++.......        .. .......  ....+.+++.+|+|+|++++++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  239 (280)
T PRK06914        160 LEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEI  239 (280)
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHH
Confidence            99999999999999999999999999999976532110        00 0101111  1123456789999999999999


Q ss_pred             hcCCCCCccccEEEeCCCcc
Q 024551          244 CLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +++...   +.+++++.|+.
T Consensus       240 ~~~~~~---~~~~~~~~~~~  256 (280)
T PRK06914        240 AESKRP---KLRYPIGKGVK  256 (280)
T ss_pred             HcCCCC---CcccccCCchH
Confidence            976543   24566666554

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=3.5e-35  Score=245.83  Aligned_cols=242  Identities=29%  Similarity=0.411  Sum_probs=206.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC-hhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++|+++||||+++||++++++|+++|++|++++|+ ++..+.+.+.+.+. +..+.++++|++|.++++++++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            567999999999999999999999999999999985 45566666666543 3468889999999999999999999988


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||||.....++.+.+.+++++.+++|+.+++.+++++.|+|.+. .+.+++++|..+..+.++...|+.||+
T Consensus        84 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~  161 (249)
T PRK09135         84 -GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKA  161 (249)
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHHH
Confidence             789999999998777777778889999999999999999999999999765 478999988877788888999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      +++.+++.++.++.+ +++++++.||++.|++....+....   ........+..+..+++|+++++.+++.+ ..+.+|
T Consensus       162 ~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g  236 (249)
T PRK09135        162 ALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEA---RQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITG  236 (249)
T ss_pred             HHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHH---HHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccC
Confidence            999999999999965 6999999999999998654333222   12334456777888999999999999875 467899


Q ss_pred             cEEEeCCCccC
Q 024551          254 QVISIDGGYTA  264 (266)
Q Consensus       254 ~~l~vdgG~~~  264 (266)
                      +.+.+++|...
T Consensus       237 ~~~~i~~g~~~  247 (249)
T PRK09135        237 QILAVDGGRSL  247 (249)
T ss_pred             cEEEECCCeec
Confidence            99999999754

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=1.5e-35  Score=248.70  Aligned_cols=242  Identities=39%  Similarity=0.522  Sum_probs=203.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH--HHHHHHHHHhcC-CeeEEEeccCCC-HHHHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM--INERIQEWESKG-FKVTGSVCDLSF-GDQREKLIETVS   90 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~--~~~~~~~l~~~~-~~~~~~~~D~~~-~~~i~~~~~~~~   90 (266)
                      .+++|+++||||++|||+++|++|+++|++|+++.|+.+.  .+...+.....+ ..+.+..+|+++ +++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999888887664  344444443222 368888899998 999999999999


Q ss_pred             hhcCCcccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC-chhh
Q 024551           91 SVFDGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR-LSAY  168 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~-~~~y  168 (266)
                      +.+ |++|++|||||.... .++.+.+.++|++.+++|+.+++++++.+.|.|+++   +||++||..+. +.+. +..|
T Consensus        82 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y  156 (251)
T COG1028          82 EEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAY  156 (251)
T ss_pred             HHc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchH
Confidence            998 789999999999877 488899999999999999999999999888888843   99999999998 7777 4999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC-
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA-  247 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~-  247 (266)
                      ++||+|+++|++.++.|+.++||+|++|+||+++|++........... ........+..|...|++++..+.|+.+.. 
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEA-LKRLAARIPLGRLGTPEEVAAAVAFLASDEA  235 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhH-HHHHHhcCCCCCCcCHHHHHHHHHHHcCcch
Confidence            999999999999999999999999999999999999877543322000 111112226668899999999999998764 


Q ss_pred             CCCccccEEEeCCCc
Q 024551          248 ASYITGQVISIDGGY  262 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~  262 (266)
                      ..+++|+.+.+|||+
T Consensus       236 ~~~~~g~~~~~~~~~  250 (251)
T COG1028         236 ASYITGQTLPVDGGL  250 (251)
T ss_pred             hccccCCEEEeCCCC
Confidence            779999999999986

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-35  Score=253.66  Aligned_cols=232  Identities=24%  Similarity=0.304  Sum_probs=195.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++.+.+.+ 
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-   81 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF-   81 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4678999999999999999999999999999999999988888888887666788999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC------CeEEEEecCCCCCCCCCchhh
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN------ASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~------g~iv~vss~~~~~~~~~~~~y  168 (266)
                      +++|+||||||....+++.+.+.++|++.+++|+.+++++++.++|.|.++..      |+||++||.++..+.+....|
T Consensus        82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  161 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIY  161 (287)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcch
Confidence            78999999999987777888899999999999999999999999999987654      799999999999998999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcc--CCcEEEEEecCcccCCCCCCCccchh-----------HHHHHHHHhcCCCCCCCCccc
Q 024551          169 AASKGAINQLTKNLACEWAT--DSIRVNAVSPWAVNTQISPPDLNDLL-----------VQEYVKLIAKTPLARSAEPNE  235 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~--~gi~v~~i~PG~v~t~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~e  235 (266)
                      +++|++++.|+++++.++..  .+||+++++||+++|++.........           .................+++|
T Consensus       162 ~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d  241 (287)
T PRK06194        162 NVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEE  241 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHH
Confidence            99999999999999999884  57999999999999987643211000           000001111111112368999


Q ss_pred             hHHHHHHHhcCC
Q 024551          236 ISPLVAFLCLPA  247 (266)
Q Consensus       236 ia~~~~~l~s~~  247 (266)
                      +|+.++.++.+.
T Consensus       242 va~~i~~~~~~~  253 (287)
T PRK06194        242 VAQLVFDAIRAG  253 (287)
T ss_pred             HHHHHHHHHHcC
Confidence            999999987543

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=2.2e-35  Score=247.59  Aligned_cols=231  Identities=21%  Similarity=0.287  Sum_probs=193.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++||||++|||++++++|+++|++|++++|+++.++++.+.+   +.++.++.+|++|.++++++++++.+.+ +++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-RNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            47999999999999999999999999999999998877666554   4478889999999999999999999988 7899


Q ss_pred             EEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           99 ILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        99 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      ++|||+|... ..++.+.+.++|++++++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|+.+|+++++
T Consensus        77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~  156 (248)
T PRK10538         77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence            9999999753 346677899999999999999999999999999988777899999999988888889999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCC-CccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEE
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPP-DLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI  256 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l  256 (266)
                      |++.++.++.++||++++|+||++.|+.... ...... .....   ........+|+|+|++++|+++....+.+++..
T Consensus       157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~  232 (248)
T PRK10538        157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD-GKAEK---TYQNTVALTPEDVSEAVWWVATLPAHVNINTLE  232 (248)
T ss_pred             HHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcH-HHHHh---hccccCCCCHHHHHHHHHHHhcCCCcccchhhc
Confidence            9999999999999999999999998544322 111111 10011   111224568999999999999977777777764


Q ss_pred             E
Q 024551          257 S  257 (266)
Q Consensus       257 ~  257 (266)
                      .
T Consensus       233 ~  233 (248)
T PRK10538        233 M  233 (248)
T ss_pred             c
Confidence            4

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-35  Score=244.93  Aligned_cols=221  Identities=27%  Similarity=0.347  Sum_probs=197.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++|||++++||++++++|+++|++|++++|+.+..++..+++...+.++.++++|++++++++++++++.+.+ 
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL-   82 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            3678999999999999999999999999999999999988888888887667789999999999999999999999988 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||+|....+.+.+.++++|++.+++|+.+++++++.+.|.|.+++.+++|++||..+..+.+....|+.+|++
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  162 (239)
T PRK07666         83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFG  162 (239)
T ss_pred             CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHH
Confidence            78999999999877677778899999999999999999999999999988878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ++.+++.++.|+.+.||+++.|+||+++|++.......           .....+..+++|+|+.++.+++..
T Consensus       163 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        163 VLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT-----------DGNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc-----------ccCCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999875432110           011235678999999999999643

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=249.71  Aligned_cols=214  Identities=20%  Similarity=0.213  Sum_probs=183.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhH-HHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNM-INERIQEWESKGF-KVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+|+++||||++|||+++|++|+++| ++|++++|+++. ++++.+++...+. +++++++|++|+++++++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999995 999999999886 8888888876543 789999999999999999999886 4


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|++|||+|..........+.++.++.+++|+.+++.+++.++|+|++++.++||++||..+..+.++...|++||+
T Consensus        86 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa  164 (253)
T PRK07904         86 -GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA  164 (253)
T ss_pred             -CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence             6899999999986432222224556678899999999999999999999888899999999988888888889999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ++.+|+++++.|+.++||+|+.|+||+++|++......             .+  ...+|+|+|+.++..+.+.
T Consensus       165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-------------~~--~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-------------AP--LTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-------------CC--CCCCHHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999987654211             01  2358999999999998653

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=5.7e-35  Score=243.10  Aligned_cols=237  Identities=36%  Similarity=0.523  Sum_probs=207.7

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +||||++++||++++++|+++|++|++++|+. +.++...+.+.+.+.+++++.+|++|+++++++++++.+.+ +++|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence            58999999999999999999999999998875 55666667777667788999999999999999999999988 78999


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHHH
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT  179 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~  179 (266)
                      +||++|......+.+.+.+++++.+++|+.+++.+++.+.+.+.+.+.++++++||..+..+.+.+..|+.+|++++.++
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~  159 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT  159 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence            99999987666667778899999999999999999999999998776789999999998889999999999999999999


Q ss_pred             HHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeC
Q 024551          180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISID  259 (266)
Q Consensus       180 ~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vd  259 (266)
                      +.++.++...|++++.++||+++|++.... .....   .......+..+..+++|+++.+++++.+...+++|+.+++|
T Consensus       160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~  235 (239)
T TIGR01830       160 KSLAKELASRNITVNAVAPGFIDTDMTDKL-SEKVK---KKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVD  235 (239)
T ss_pred             HHHHHHHhhcCeEEEEEEECCCCChhhhhc-ChHHH---HHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeC
Confidence            999999999999999999999999875442 22111   22334567788999999999999999887789999999999


Q ss_pred             CCc
Q 024551          260 GGY  262 (266)
Q Consensus       260 gG~  262 (266)
                      +|+
T Consensus       236 ~g~  238 (239)
T TIGR01830       236 GGM  238 (239)
T ss_pred             CCc
Confidence            986

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-35  Score=249.63  Aligned_cols=222  Identities=26%  Similarity=0.311  Sum_probs=190.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++|+++||||++|||++++++|+++|++|++++|+++..+.        ..+++++++|++|+++++++++.+.+.+ ++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~   73 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARA-GR   73 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhC-CC
Confidence            46899999999999999999999999999999998765431        2357889999999999999999999998 78


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|++|||||....+++.+.+.+++++.+++|+.+++++++.++|.|++++.++||++||..+..+.+....|+++|++++
T Consensus        74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE  153 (270)
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence            99999999998778888889999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-----hHH--HHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-----LVQ--EYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +|++.++.|+.++||+++.|+||+++|++........     ...  .........+..+..+|+++|+.+++++.+.
T Consensus       154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999865432111     000  0011111234566788999999999999754

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.2e-37  Score=231.43  Aligned_cols=241  Identities=30%  Similarity=0.417  Sum_probs=209.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+.+|-+.+|||+.+|+|++.|..|+++|+.|++.+-.....++.++++   |+++.|.++|++++++++.++..++.+|
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            4578999999999999999999999999999999999888888888876   7799999999999999999999999999


Q ss_pred             CCcccEEEecccccc------ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc------CCCeEEEEecCCCCCC
Q 024551           94 DGKLNILVNNAALVV------MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS------GNASIVFMSSVAGAIS  161 (266)
Q Consensus        94 ~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~iv~vss~~~~~~  161 (266)
                       |++|.+|||||+..      ...-...+.|++++.+++|+.++|++++.-..+|-++      .+|.||+..|.+++.+
T Consensus        82 -grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg  160 (260)
T KOG1199|consen   82 -GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG  160 (260)
T ss_pred             -cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence             89999999999753      2233456899999999999999999999999999653      2689999999999999


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-CCCCCccchHHHH
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLV  240 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~eia~~~  240 (266)
                      ..+..+|++||.++.+|+--++++++..|||++.|.||.++||+.....+. ....   ....+|. .|++.|.|-+..+
T Consensus       161 q~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpek-v~~f---la~~ipfpsrlg~p~eyahlv  236 (260)
T KOG1199|consen  161 QTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEK-VKSF---LAQLIPFPSRLGHPHEYAHLV  236 (260)
T ss_pred             ccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHH-HHHH---HHHhCCCchhcCChHHHHHHH
Confidence            999999999999999999999999999999999999999999997765322 1111   1122343 5899999999988


Q ss_pred             HHHhcCCCCCccccEEEeCCCccC
Q 024551          241 AFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       241 ~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      -...  +..|+||++|++||-..+
T Consensus       237 qaii--enp~lngevir~dgalrm  258 (260)
T KOG1199|consen  237 QAII--ENPYLNGEVIRFDGALRM  258 (260)
T ss_pred             HHHH--hCcccCCeEEEecceecC
Confidence            8887  668999999999997654

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-35  Score=246.59  Aligned_cols=220  Identities=24%  Similarity=0.278  Sum_probs=190.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||++|||++++++|+++|++|++++|+.+.++++.+.+.  +.++.++++|++|.++++++++.+.+.+.+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            789999999999999999999999999999999998888777664  457889999999999999999998876237899


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      ++|||||....+.+.+.+.+++++.+++|+.+++.+++++.++|++++.++||++||..+..+.+....|+.||+++++|
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  159 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGL  159 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence            99999998877788888999999999999999999999999999988789999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      +++++.++.++||++++|.||+++|++..........    ...  .......+|+|+++.+++++..
T Consensus       160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~----~~~--~~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        160 TEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDA----GST--KRLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHhcccCcEEEEEecCCcCCcccccccchhhh----hhH--hhccCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999986641111110    011  1122346789999999999853

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.1e-35  Score=250.20  Aligned_cols=235  Identities=29%  Similarity=0.317  Sum_probs=193.9

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ...++.+++++|||+++|||+++|++|+++|++|++..|+.++.++.++++...  ...+.+++||++|.++|++++++.
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~  108 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF  108 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            346788999999999999999999999999999999999999999999999863  457888999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC--------
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS--------  161 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~--------  161 (266)
                      .+.+ +++|++|||||++....  ..+.|.+|..|.+|+.|+|.+++.++|.|++...+|||++||......        
T Consensus       109 ~~~~-~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~  185 (314)
T KOG1208|consen  109 KKKE-GPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSG  185 (314)
T ss_pred             HhcC-CCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccc
Confidence            9888 78999999999987544  567789999999999999999999999999887799999999875110        


Q ss_pred             -----CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccch
Q 024551          162 -----IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEI  236 (266)
Q Consensus       162 -----~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei  236 (266)
                           +.....|+.||.++..+++.+++.+.. ||.+++++||.+.|+...+ . .....   .+..........++++.
T Consensus       186 ~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~-~~~~~---~l~~~l~~~~~ks~~~g  259 (314)
T KOG1208|consen  186 EKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-V-NLLLR---LLAKKLSWPLTKSPEQG  259 (314)
T ss_pred             hhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec-c-hHHHH---HHHHHHHHHhccCHHHH
Confidence                 223346999999999999999999998 9999999999999984333 1 11111   11111122223689999


Q ss_pred             HHHHHHHhc-CCCCCccccE
Q 024551          237 SPLVAFLCL-PAASYITGQV  255 (266)
Q Consensus       237 a~~~~~l~s-~~~~~~~G~~  255 (266)
                      |++.+|++. ++-...+|.+
T Consensus       260 a~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  260 AATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             hhheehhccCccccCccccc
Confidence            999999885 4445666665

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-34  Score=240.76  Aligned_cols=214  Identities=21%  Similarity=0.311  Sum_probs=190.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +|+++||||++|||++++++|+++|++|++++|++++++++.+++.+.  +.+++++++|++|++++.++++++.+.+ +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-G   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            689999999999999999999999999999999999988888877654  5688999999999999999999999998 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC-chhhhhhHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR-LSAYAASKGA  174 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~-~~~y~~sK~a  174 (266)
                      ++|++|||||+....++.+.+.+.+++.+++|+.+++++++.++|+|++.+.++||++||..+..+.+. ...|+.||++
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a  160 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG  160 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence            899999999998777777888999999999999999999999999998887889999999988888775 6899999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ++.+++.++.++...||+|++|+||+++|++......               .....++++.++.++..+..+
T Consensus       161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~---------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS---------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc---------------CCccCCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999987654211               113467899999998887543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.4e-34  Score=237.88  Aligned_cols=234  Identities=23%  Similarity=0.364  Sum_probs=198.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||+++||.++++.|+++|++|++++|+++.++.+.+.+... .+++++++|++++++++++++++.+.+ 
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   79 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL-   79 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            478999999999999999999999999999999999998887776666543 368889999999999999999998887 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y~~sK~  173 (266)
                      +++|.+|+++|........  +.+++++.+++|+.+++++.+.++|.|.+  .+++|++||..+. .+.+....|+.+|+
T Consensus        80 ~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~  155 (238)
T PRK05786         80 NAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKA  155 (238)
T ss_pred             CCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHH
Confidence            6899999999976543333  34889999999999999999999999865  4799999998764 35677789999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-CCCCCccchHHHHHHHhcCCCCCcc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++.+++.++.++..+||+++.|+||++.|++....       .+..   ..+. .+..+++|+++.+++++++...+++
T Consensus       156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-------~~~~---~~~~~~~~~~~~~va~~~~~~~~~~~~~~~  225 (238)
T PRK05786        156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-------NWKK---LRKLGDDMAPPEDFAKVIIWLLTDEADWVD  225 (238)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-------hhhh---hccccCCCCCHHHHHHHHHHHhcccccCcc
Confidence            999999999999999999999999999999864321       0111   1121 2457899999999999998888999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.+.+|||..+
T Consensus       226 g~~~~~~~~~~~  237 (238)
T PRK05786        226 GVVIPVDGGARL  237 (238)
T ss_pred             CCEEEECCcccc
Confidence            999999999765

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=3.9e-34  Score=248.90  Aligned_cols=240  Identities=20%  Similarity=0.159  Sum_probs=190.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|.++++++++++.+.+ 
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   81 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG-   81 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC-
Confidence            4578999999999999999999999999999999999999888888876545678899999999999999999987765 


Q ss_pred             CcccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC--CeEEEEecCCCCC-----------
Q 024551           95 GKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN--ASIVFMSSVAGAI-----------  160 (266)
Q Consensus        95 ~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~--g~iv~vss~~~~~-----------  160 (266)
                      +++|+||||||+... ....+.+.++|+..+++|+.+++++++.++|.|++.+.  ++||++||.....           
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~  161 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA  161 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence            789999999997643 23346688999999999999999999999999987653  6999999965421           


Q ss_pred             ------------------------CCCCchhhhhhHHHHHHHHHHHHHHhc-cCCcEEEEEecCcc-cCCCCCCCccchh
Q 024551          161 ------------------------SIPRLSAYAASKGAINQLTKNLACEWA-TDSIRVNAVSPWAV-NTQISPPDLNDLL  214 (266)
Q Consensus       161 ------------------------~~~~~~~y~~sK~al~~~~~~~a~el~-~~gi~v~~i~PG~v-~t~~~~~~~~~~~  214 (266)
                                              ++.+...|+.||.+.+.+++.+++++. .+||+|++++||++ .|++.+.....  
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~--  239 (322)
T PRK07453        162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPL--  239 (322)
T ss_pred             ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHH--
Confidence                                    112346899999999999999999995 46899999999999 58876543211  


Q ss_pred             HHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEE
Q 024551          215 VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS  257 (266)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~  257 (266)
                      .................++++.++.+++++.+.....+|.++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        240 FQKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            1111111111122234577888888888886554456888776

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=235.34  Aligned_cols=198  Identities=24%  Similarity=0.305  Sum_probs=173.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++||||++|||++++++|+++ ++|++++|+.+                 .+++|++|+++++++++++     +++|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~id   57 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEKV-----GKVD   57 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhc-----CCCC
Confidence            37999999999999999999999 99999999753                 3689999999999988753     6899


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      ++|||+|.....++.+.+.++|++.+++|+.+++++++.+.|+|++  .|+|+++||..+..+.+.+..|+++|+++++|
T Consensus        58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  135 (199)
T PRK07578         58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGF  135 (199)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHH
Confidence            9999999877777888899999999999999999999999999975  37999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEe
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISI  258 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~v  258 (266)
                      +++++.|+ ++||+|++|+||+++|++....             ...+..+..+|+|+|+.++++++   .+.+|+.+.+
T Consensus       136 ~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~-------------~~~~~~~~~~~~~~a~~~~~~~~---~~~~g~~~~~  198 (199)
T PRK07578        136 VKAAALEL-PRGIRINVVSPTVLTESLEKYG-------------PFFPGFEPVPAARVALAYVRSVE---GAQTGEVYKV  198 (199)
T ss_pred             HHHHHHHc-cCCeEEEEEcCCcccCchhhhh-------------hcCCCCCCCCHHHHHHHHHHHhc---cceeeEEecc
Confidence            99999999 8899999999999999763110             11233456789999999999985   3589998875

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=8.5e-35  Score=226.57  Aligned_cols=186  Identities=30%  Similarity=0.433  Sum_probs=172.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++.|.++|||||++|||+++|++|.+.|-+|++++|+++++++.+++.    ..++...||+.|.++++++++++.+.+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC
Confidence            4678999999999999999999999999999999999999998888764    567888999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCC--CCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           94 DGKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                       +.++++|||||+...-.+.  +...+..++.+.+|+.+|.++++.++|++.+++.+.||+|||..+..|....+.||++
T Consensus        77 -P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaT  155 (245)
T COG3967          77 -PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCAT  155 (245)
T ss_pred             -CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhh
Confidence             6899999999998654443  4466778999999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQ  204 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~  204 (266)
                      |+|+..|+.+|+..+...+|+|--+.|-.|+|+
T Consensus       156 KAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         156 KAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999999999999999999999999996

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-34  Score=241.46  Aligned_cols=222  Identities=32%  Similarity=0.400  Sum_probs=194.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|+++||||+++||++++++|+++|++|++++|+.+..+++.+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            5789999999999999999999999999999999988888888887777789999999999999999999999988 789


Q ss_pred             cEEEeccccccccCCCCC-CHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           98 NILVNNAALVVMKRATEY-TLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      |++|||+|....+.+.+. +.+++++.+++|+.+++.+++.+.|.|.+. .++||++||..+..+.++...|+.+|++++
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  158 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALH  158 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHH
Confidence            999999998777777777 899999999999999999999999999765 489999999999888999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC--CCCCCCccchHHHHHHHhcC
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP--LARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~eia~~~~~l~s~  246 (266)
                      ++++.++.++.++||+++++.||++.|++...........     ....+  ..++.+|+|+|+.+++++..
T Consensus       159 ~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        159 GFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKP-----LGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccc-----cccccccccCCCCHHHHHHHHHHHhhC
Confidence            9999999999999999999999999999866433211100     01112  23788999999999999964

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-33  Score=238.81  Aligned_cols=237  Identities=21%  Similarity=0.279  Sum_probs=195.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      .|++|||||+++||++++++|+++|++|++++|+++.++++.+.+   +.++.++++|++|.++++++++++.+.+ +++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i   77 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAAL-GRI   77 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence            478999999999999999999999999999999988776665543   3478899999999999999999998887 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |++|||||....++..+.+.+++++.+++|+.+++++++.++|+|++++.++||++||..+..+.|+...|+.||++++.
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG  157 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence            99999999987777888899999999999999999999999999988877899999999988888899999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--------chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--------DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      |+++++.++.++||+++.++||++.|++.+....        ..............+..-..+++|++++++..+...  
T Consensus       158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~--  235 (276)
T PRK06482        158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQT--  235 (276)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCC--
Confidence            9999999999999999999999999987543211        111111122222222333478999999999988533  


Q ss_pred             CccccEEEeCCC
Q 024551          250 YITGQVISIDGG  261 (266)
Q Consensus       250 ~~~G~~l~vdgG  261 (266)
                       ..+..+++.+|
T Consensus       236 -~~~~~~~~g~~  246 (276)
T PRK06482        236 -PAPRRLTLGSD  246 (276)
T ss_pred             -CCCeEEecChH
Confidence             22445555544

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=5e-34  Score=236.75  Aligned_cols=191  Identities=23%  Similarity=0.295  Sum_probs=176.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      -+..+|.|+||||-+|+|+.+|++|.++|++|+....+++..+++..+..  .++...++.|++++++|+++.+.+++..
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            34678999999999999999999999999999988888888777777765  5688888999999999999999999976


Q ss_pred             -CCcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           94 -DGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        94 -~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                       ...+-.||||||+. ..++.+..+.+++++++++|++|++.+++.++|++++. +||||+|||..+..+.|..+.|++|
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~~S  181 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYCVS  181 (322)
T ss_pred             ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccchhh
Confidence             23599999999976 57788889999999999999999999999999999887 5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP  207 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~  207 (266)
                      |+|+++|+.+++.|+.+.||+|..|.||++.|++..
T Consensus       182 K~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  182 KFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999999999999999999999876

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-33  Score=232.91  Aligned_cols=226  Identities=29%  Similarity=0.396  Sum_probs=196.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+.+|+++||||+++||++++++|+++|++|++++|+++.++++.+++... .+++++++|++|+++++++++++.+.+ 
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF-   80 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            467899999999999999999999999999999999998888888877654 678899999999999999999999988 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++||++|....+++.+.+.+++++.+++|+.+++.+++++++.|++ +.++||++||..+..+.+....|+.+|++
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~~~~~y~~sk~a  159 (237)
T PRK07326         81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-GGGYIINISSLAGTNFFAGGAAYNASKFG  159 (237)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-CCeEEEEECChhhccCCCCCchHHHHHHH
Confidence            68999999999877777888899999999999999999999999999943 45899999999888888888999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      ++++++.++.++...|+++++++||++.|++........             .....+++|+++.+++++....+.+.++
T Consensus       160 ~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-------------~~~~~~~~d~a~~~~~~l~~~~~~~~~~  226 (237)
T PRK07326        160 LVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-------------DAWKIQPEDIAQLVLDLLKMPPRTLPSK  226 (237)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-------------hhccCCHHHHHHHHHHHHhCCccccccc
Confidence            999999999999999999999999999998755432110             0013689999999999998776665555


Q ss_pred             EE
Q 024551          255 VI  256 (266)
Q Consensus       255 ~l  256 (266)
                      .-
T Consensus       227 ~~  228 (237)
T PRK07326        227 IE  228 (237)
T ss_pred             eE
Confidence            43

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-33  Score=239.41  Aligned_cols=220  Identities=24%  Similarity=0.289  Sum_probs=183.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||++|||++++++|+++|++|++++|+.+.++++.+    .  .+.++.+|++|+++++++++++.+.+ +++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   74 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----A--GFTAVQLDVNDGAALARLAEELEAEH-GGLD   74 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----C--CCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence            789999999999999999999999999999999877654432    2  36788999999999999999999888 7899


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      ++|||||....+++.+.+.++|++.+++|+.+++.+++.++|.|++. .|+||++||..+..+.+....|+++|+++++|
T Consensus        75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  153 (274)
T PRK05693         75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL  153 (274)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            99999998777788888999999999999999999999999999764 48999999999998889999999999999999


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccch---------hHHHHH--HHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL---------LVQEYV--KLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~---------~~~~~~--~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      +++++.|+.++||+|++++||+++|++........         ......  ............+|+++|+.++-.+..
T Consensus       154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999865421110         000001  111111123346899999999887753

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-34  Score=237.64  Aligned_cols=228  Identities=20%  Similarity=0.241  Sum_probs=185.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH-HHhhcC--C
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET-VSSVFD--G   95 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~~--~   95 (266)
                      ++++||||++|||++++++|+++|++|++++|+.+..  .   ....+.++.++++|++|++++++++++ +.+.+.  +
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            4799999999999999999999999999999986531  1   222355788999999999999998877 555441  4


Q ss_pred             cccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           96 KLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        96 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      ++|++|||+|.... .++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|+++|++
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  156 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA  156 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence            79999999998653 56777899999999999999999999999999988777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc--cchhHHHHHHHHhcCCCCCCCCccchHH-HHHHHhcCCCCCc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL--NDLLVQEYVKLIAKTPLARSAEPNEISP-LVAFLCLPAASYI  251 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~eia~-~~~~l~s~~~~~~  251 (266)
                      ++++++.++.+ ...||+++.|+||+++|++.....  ...............+.++..+|+|+|+ .+.+|+++.-...
T Consensus       157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~~~~  235 (243)
T PRK07023        157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDDFGST  235 (243)
T ss_pred             HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccccCCC
Confidence            99999999999 778999999999999998753211  0000111223344567788999999999 5678887654433


Q ss_pred             c
Q 024551          252 T  252 (266)
Q Consensus       252 ~  252 (266)
                      +
T Consensus       236 ~  236 (243)
T PRK07023        236 P  236 (243)
T ss_pred             C
Confidence            3

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-33  Score=234.98  Aligned_cols=211  Identities=20%  Similarity=0.201  Sum_probs=187.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |+++||||++|||++++++|+++|++|++++|+++..++..+++... +.+++++++|++|+++++++++++.+    ++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~----~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA----LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh----cC
Confidence            78999999999999999999999999999999999888887776554 45889999999999999999998754    46


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |++|||+|........+.+.+++++.+++|+.+++++++.+.|+|.+++.++||++||..+..+.+....|+.+|+++++
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTA  157 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHH
Confidence            99999999877667778899999999999999999999999999998878999999999988888889999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ++++++.|+.++||+|++|+||+++|++.....              .+.....+|+|+++.++.+++..
T Consensus       158 ~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~--------------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        158 FLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK--------------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHhhccCcEEEEEecCcccChhhhccC--------------CCccccCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999998654321              12334678999999999999754

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=268.04  Aligned_cols=219  Identities=25%  Similarity=0.341  Sum_probs=193.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++||+++||||++|||++++++|+++|++|++++|+++.++++.+++...+.++.++++|++|+++++++++++.+.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999999999999999999988887777789999999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCC--CHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           94 DGKLNILVNNAALVVMKRATEY--TLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                       +++|++|||||......+.+.  +.+++++.+++|+.+++++++.++|.|++++.|+||++||.++..+.+....|++|
T Consensus       447 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  525 (657)
T PRK07201        447 -GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVAS  525 (657)
T ss_pred             -CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHH
Confidence             789999999997654444332  36889999999999999999999999998888999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      |+++++|+++++.|+.++||+|++|+||+++|++..+...             .......+||++|+.++..+..
T Consensus       526 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-------------~~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        526 KAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-------------YNNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-------------ccCCCCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998654210             0112346899999999987644

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=235.92  Aligned_cols=203  Identities=25%  Similarity=0.261  Sum_probs=168.8

Q ss_pred             HHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEeccccccccCCC
Q 024551           34 IVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT  113 (266)
Q Consensus        34 ia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~  113 (266)
                      +|++|+++|++|++++|+++..+           ...++++|++|.++++++++++.    +++|+||||||....    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----------~~~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~~----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----------LDGFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPGT----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----------hhHhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCCC----
Confidence            47899999999999999876532           12367899999999999998773    579999999997521    


Q ss_pred             CCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC---------------------------CCCCch
Q 024551          114 EYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI---------------------------SIPRLS  166 (266)
Q Consensus       114 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~---------------------------~~~~~~  166 (266)
                          +.|++.+++|+.+++.+++.++|+|.+  .|+||++||..+..                           +.++..
T Consensus        62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
T PRK12428         62 ----APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT  135 (241)
T ss_pred             ----CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence                247899999999999999999999965  37999999998763                           556778


Q ss_pred             hhhhhHHHHHHHHHHHH-HHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          167 AYAASKGAINQLTKNLA-CEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a-~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      .|++||+++++|++.++ .|+.++|||||+|+||+++|++...........  .......|++|..+|||+|+.++||++
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe~va~~~~~l~s  213 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQE--RVDSDAKRMGRPATADEQAAVLVFLCS  213 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhH--hhhhcccccCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999 999999999999999999999876532211111  111124578899999999999999999


Q ss_pred             CCCCCccccEEEeCCCcc
Q 024551          246 PAASYITGQVISIDGGYT  263 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~  263 (266)
                      +...+++|+.+.+|||+.
T Consensus       214 ~~~~~~~G~~i~vdgg~~  231 (241)
T PRK12428        214 DAARWINGVNLPVDGGLA  231 (241)
T ss_pred             hhhcCccCcEEEecCchH
Confidence            989999999999999975

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=3.1e-33  Score=231.96  Aligned_cols=192  Identities=30%  Similarity=0.350  Sum_probs=173.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      -.|++++|||||.|||++.|++||++|.+|++++|++++++.+++|+.+. +..+.++.+|+++.+.+-+-+.+....  
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~--  124 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG--  124 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC--
Confidence            34699999999999999999999999999999999999999999999876 457889999999988743333333332  


Q ss_pred             CcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           95 GKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        95 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      .++.+||||+|...  +..+.+.+.+.+++.+.+|..+...+++.++|.|.+++.|.||+++|.++..+.|.+..|+++|
T Consensus       125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK  204 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASK  204 (312)
T ss_pred             CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHH
Confidence            47999999999875  7778888888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD  209 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~  209 (266)
                      +.++.|+++++.||..+||.|.++.|.+|-|+|....
T Consensus       205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            9999999999999999999999999999999986643

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=4.1e-32  Score=214.90  Aligned_cols=223  Identities=26%  Similarity=0.320  Sum_probs=179.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHC-CCeEEE-ecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024551           19 MTALVTGGTRGIGYAIVEELARF-GASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-DG   95 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~-G~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~   95 (266)
                      |.++||||++|||..++++|.+. |..+++ +.|+++...+..+.......+++++++|+++.++++++++++.+.- ..
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            66999999999999999999875 566654 4566776533333333346799999999999999999999999973 24


Q ss_pred             cccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-----------CCeEEEEecCCCCCCC-
Q 024551           96 KLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-----------NASIVFMSSVAGAISI-  162 (266)
Q Consensus        96 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-----------~g~iv~vss~~~~~~~-  162 (266)
                      .+|+|+||||+.. .....+.+.+.|-+.+++|..|+++++|+++|++++..           +..|||+||..+..+. 
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~  163 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGF  163 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCC
Confidence            6999999999874 45666778889999999999999999999999998653           3479999988776432 


Q ss_pred             --CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHH
Q 024551          163 --PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV  240 (266)
Q Consensus       163 --~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~  240 (266)
                        ..+.+|..||+|+++|+|+++.||.+.+|-|.++|||||.|+|.....                   ..++||-+..+
T Consensus       164 ~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a-------------------~ltveeSts~l  224 (249)
T KOG1611|consen  164 RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKA-------------------ALTVEESTSKL  224 (249)
T ss_pred             CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCc-------------------ccchhhhHHHH
Confidence              346899999999999999999999999999999999999999987542                   24566666666


Q ss_pred             HHHhcCCCCCccccEEEeCC
Q 024551          241 AFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       241 ~~l~s~~~~~~~G~~l~vdg  260 (266)
                      +--.......=+|-+++-||
T Consensus       225 ~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  225 LASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             HHHHHhcCcccCcceEccCC
Confidence            65555444556788877776

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.6e-33  Score=218.54  Aligned_cols=187  Identities=27%  Similarity=0.336  Sum_probs=170.2

Q ss_pred             CCCEEEEecCC-CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGT-RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas-~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +.|.|+||||+ +|||.+++++|+++|+.|+.++|+.+...++..+.     ++..+.+|+++++++..+..++++...|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            46899999876 79999999999999999999999988877666543     4788899999999999999999996558


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|+|+||||..-..+..+.+.+..++.|++|+.|.+++++++...+.+. .|+|||++|..+..++|....|++||+|+
T Consensus        81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~~vpfpf~~iYsAsKAAi  159 (289)
T KOG1209|consen   81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAGVVPFPFGSIYSASKAAI  159 (289)
T ss_pred             ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeEEeccchhhhhhHHHHHH
Confidence            99999999999877888899999999999999999999999999555554 59999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD  209 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~  209 (266)
                      .++++.|+.|+.+.||+|..+.||-+.|++....
T Consensus       160 hay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  160 HAYARTLRLELKPFGVRVINAITGGVATDIADKR  193 (289)
T ss_pred             HHhhhhcEEeeeccccEEEEecccceecccccCC
Confidence            9999999999999999999999999999876653

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=1.1e-32  Score=217.40  Aligned_cols=163  Identities=39%  Similarity=0.514  Sum_probs=154.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC-eEEEecCC--hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA-SVHTCGRD--QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~-~v~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      |+++||||++|||++++++|+++|. .|++++|+  .+..+++.+++...+.++.++++|++++++++++++++.+.+ +
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence            7999999999999999999999965 67899999  788888999998888999999999999999999999999888 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|++|||+|....+++.+.+.++|++.+++|+.+++++.+.++|    ++.|+||++||..+..+.|++..|+++|+|+
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal  155 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAAL  155 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHH
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHH
Confidence            899999999999888999999999999999999999999999999    4478999999999999999999999999999


Q ss_pred             HHHHHHHHHHh
Q 024551          176 NQLTKNLACEW  186 (266)
Q Consensus       176 ~~~~~~~a~el  186 (266)
                      ++|+++++.|+
T Consensus       156 ~~~~~~la~e~  166 (167)
T PF00106_consen  156 RGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-32  Score=225.61  Aligned_cols=204  Identities=21%  Similarity=0.261  Sum_probs=173.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||++|||++++++|+++|++|++++|+++.++++.+.    ..++.++++|++|+++++++++++.    ..+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~----~~~d   73 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLP----FIPE   73 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhcc----cCCC
Confidence            7899999999999999999999999999999998876655443    3468889999999999999988763    2479


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      .+|+|||.....+..+.+.++|++++++|+.+++++++.+.|.|++  .++||++||..+..+.+....|+++|+++++|
T Consensus        74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  151 (240)
T PRK06101         74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYF  151 (240)
T ss_pred             EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence            9999999754444456789999999999999999999999999964  36899999999999999999999999999999


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      ++.++.|+..+||++++++||+++|++......              ......+|+|+++.++..+..
T Consensus       152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~--------------~~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF--------------AMPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             HHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC--------------CCCcccCHHHHHHHHHHHHhc
Confidence            999999999999999999999999997553210              111235789999999877754

>PRK09291 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-31  Score=224.79  Aligned_cols=220  Identities=24%  Similarity=0.263  Sum_probs=183.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+++.+.....+.++.++++|++|++++++++.       +++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCC
Confidence            5899999999999999999999999999999999888877777766666678999999999998877653       479


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |++|||||....+++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++|++++.
T Consensus        75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~  154 (257)
T PRK09291         75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEA  154 (257)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHH
Confidence            99999999887788888999999999999999999999999999988777899999999988888889999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-----HHHHHHH-HhcCCCCCCCCccchHHHHHHHhc
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-----VQEYVKL-IAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      +++.++.++.+.||+++.|+||++.|++.........     ....... ....+. ...+++|+++.+..++.
T Consensus       155 ~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~  227 (257)
T PRK09291        155 IAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIP  227 (257)
T ss_pred             HHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999987543221100     0000000 111222 23578999888887764

>PRK08264 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.9e-31  Score=221.00  Aligned_cols=183  Identities=31%  Similarity=0.393  Sum_probs=165.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++++|+++||||+++||++++++|+++|+ +|++++|+.+++++       .+.++.++.+|++|+++++++++..   
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~---   71 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAA---   71 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhc---
Confidence            567899999999999999999999999999 99999999876543       3457889999999999998877753   


Q ss_pred             cCCcccEEEecccc-ccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                        +++|++||++|. .....+.+.+.++|++.+++|+.+++.+++++.|.|++.+.+++|++||..+..+.+....|+.+
T Consensus        72 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~s  149 (238)
T PRK08264         72 --SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSAS  149 (238)
T ss_pred             --CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHH
Confidence              679999999998 55667788899999999999999999999999999988778999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPP  208 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~  208 (266)
                      |++++++++.++.++.++|++++.+.||.++|++...
T Consensus       150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~  186 (238)
T PRK08264        150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG  186 (238)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc
Confidence            9999999999999999999999999999999987543

>PRK08017 oxidoreductase; Provisional

Probab=100.00  E-value=5.3e-31  Score=221.65  Aligned_cols=224  Identities=25%  Similarity=0.282  Sum_probs=185.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||+++||++++++|+++|++|++++|+.++++.+.    +.  .++.+++|++|.++++++++++.+..++++|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            78999999999999999999999999999999987765442    22  3678899999999999999998875446799


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      .+|||+|.....++.+.+.+++++.+++|+.+++++++.++|.|++.+.++||++||..+..+.+....|+.+|++++.+
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~  156 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAW  156 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHH
Confidence            99999998766777788999999999999999999999999999988778999999999998889999999999999999


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      +++++.++..+|++++.++||+++|++...............  .....+...+|+|+++.+..++......
T Consensus       157 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        157 SDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVEN--PGIAARFTLGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             HHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhh--hHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999987654321110000000  0000123578999999999999765443

>PRK08177 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-31  Score=217.29  Aligned_cols=181  Identities=23%  Similarity=0.315  Sum_probs=156.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||++|||++++++|+++|++|++++|+++..+++.+ +    .++.++.+|++|+++++++++.+.+   +++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~----~~~~~~~~D~~d~~~~~~~~~~~~~---~~id   73 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L----PGVHIEKLDMNDPASLDQLLQRLQG---QRFD   73 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c----cccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence            789999999999999999999999999999999876654322 1    3567888999999999999998854   4799


Q ss_pred             EEEeccccccc--cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC---CCchhhhhhHH
Q 024551           99 ILVNNAALVVM--KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI---PRLSAYAASKG  173 (266)
Q Consensus        99 ~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~---~~~~~y~~sK~  173 (266)
                      ++|||+|....  .++.+.+.+++++.+++|+.+++.+++.++|.|++. .++|++++|..+..+.   ..+..|+++|+
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~  152 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKA  152 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHH
Confidence            99999998643  456778899999999999999999999999999754 4799999997765433   35678999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPP  208 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~  208 (266)
                      +++.|++.++.|+.++||+|++|+||+++|++...
T Consensus       153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             HHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence            99999999999999999999999999999998654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=5.6e-31  Score=218.14  Aligned_cols=221  Identities=23%  Similarity=0.200  Sum_probs=192.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +.++|||+|+|||+++|.++..+|++|.++.|+.+++++.+++++-.  ...+.+..+|+.|.+++...++++++.+ ++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CC
Confidence            79999999999999999999999999999999999999999998754  2347788999999999999999999998 89


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      +|.+|+|||..-++-+++.+.+.++..+++|+.++++++++.++.|++.. .|+|+.+||..+..+..++++|+++|+|+
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            99999999999999999999999999999999999999999999998876 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      .+|+..+++|+.++||+|..+.|+.++||.+.+....  ..+...+.+..  ....++||.|..++--+
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~t--kP~~t~ii~g~--ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKT--KPEETKIIEGG--SSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccccc--CchheeeecCC--CCCcCHHHHHHHHHhHH
Confidence            9999999999999999999999999999865542111  11111222111  12367888888876544

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=209.53  Aligned_cols=213  Identities=22%  Similarity=0.228  Sum_probs=176.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||+++||++++++|+++|++|++++|+++..+++..    .  .+.++++|+++.++++++++++..   +++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~--~~~~~~~D~~~~~~v~~~~~~~~~---~~~d   72 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L--GAEALALDVADPASVAGLAWKLDG---EALD   72 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c--cceEEEecCCCHHHHHHHHHHhcC---CCCC
Confidence            689999999999999999999999999999999876654432    2  355789999999999998877642   4799


Q ss_pred             EEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc---hhhhhhHH
Q 024551           99 ILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL---SAYAASKG  173 (266)
Q Consensus        99 ~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~---~~y~~sK~  173 (266)
                      ++|||+|...  .....+.+.++|++.+++|+.+++.+++.+.|.|.+. .|++++++|..+..+....   ..|+.+|+
T Consensus        73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~  151 (222)
T PRK06953         73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKA  151 (222)
T ss_pred             EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHH
Confidence            9999999863  3456677899999999999999999999999998664 5899999998776554332   35999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      +++++++.++.++.  +++|++|+||+++|++....                   ....+++.+..++.++.+.....+|
T Consensus       152 a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~  210 (222)
T PRK06953        152 ALNDALRAASLQAR--HATCIALHPGWVRTDMGGAQ-------------------AALDPAQSVAGMRRVIAQATRRDNG  210 (222)
T ss_pred             HHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCCC-------------------CCCCHHHHHHHHHHHHHhcCcccCc
Confidence            99999999998864  69999999999999985531                   1246788899998887766778999


Q ss_pred             cEEEeCCCc
Q 024551          254 QVISIDGGY  262 (266)
Q Consensus       254 ~~l~vdgG~  262 (266)
                      +++..|++.
T Consensus       211 ~~~~~~~~~  219 (222)
T PRK06953        211 RFFQYDGVE  219 (222)
T ss_pred             eEEeeCCcC
Confidence            999888764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-29  Score=210.72  Aligned_cols=197  Identities=16%  Similarity=0.126  Sum_probs=151.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|+++||||++|||++++++|+++|++|++++|++....+   .... + ...++.+|++|.+++++       .+
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~~~-~-~~~~~~~D~~~~~~~~~-------~~   77 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SNDE-S-PNEWIKWECGKEESLDK-------QL   77 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hhcc-C-CCeEEEeeCCCHHHHHH-------hc
Confidence            45789999999999999999999999999999999998732111   1111 1 23577899999988753       34


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc--CCC-eEEEEecCCCCCCCCCchhhhh
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS--GNA-SIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g-~iv~vss~~~~~~~~~~~~y~~  170 (266)
                       +++|++|||||....   .+.+.++|++.+++|+.+++++++.++|.|.++  ++| .+++.+|.++..+ +....|++
T Consensus        78 -~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~a  152 (245)
T PRK12367         78 -ASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEI  152 (245)
T ss_pred             -CCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHH
Confidence             579999999997533   345789999999999999999999999999763  223 3444556555443 45678999


Q ss_pred             hHHHHHHHH---HHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          171 SKGAINQLT---KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       171 sK~al~~~~---~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ||+|+..+.   +.++.|+...+++|+.++||+++|++.+.                    +..+|+|+|+.+++.+...
T Consensus       153 SKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~--------------------~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        153 SKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNPI--------------------GIMSADFVAKQILDQANLG  212 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCcc--------------------CCCCHHHHHHHHHHHHhcC
Confidence            999986544   44445567889999999999999986311                    2467999999999999643

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.9e-29  Score=205.85  Aligned_cols=219  Identities=28%  Similarity=0.368  Sum_probs=181.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      .|+++||||+++||++++++|+++ ++|++++|+.+..+++.+..    ..++++++|++|++++++++++.     +++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~-----~~i   72 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL-----GRL   72 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc-----CCC
Confidence            489999999999999999999999 99999999987765554432    25778899999999998888754     479


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |++||++|.....+..+.+.++|.+.+++|+.+++.+++.+++.|++. .+++|++||..+..+.++...|+.+|+++++
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~  151 (227)
T PRK08219         73 DVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRA  151 (227)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence            999999998776677788999999999999999999999999999876 4799999999998888889999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEE
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS  257 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~  257 (266)
                      +++.++.++... ++++++.||++++++.......        .....+..++.+++|+++.+++++....   .|++..
T Consensus       152 ~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~--------~~~~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~~  219 (227)
T PRK08219        152 LADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQ--------EGGEYDPERYLRPETVAKAVRFAVDAPP---DAHITE  219 (227)
T ss_pred             HHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhh--------hccccCCCCCCCHHHHHHHHHHHHcCCC---CCccce
Confidence            999999988877 9999999999988754322110        0112344678999999999999996532   455554


Q ss_pred             eC
Q 024551          258 ID  259 (266)
Q Consensus       258 vd  259 (266)
                      ++
T Consensus       220 ~~  221 (227)
T PRK08219        220 VV  221 (227)
T ss_pred             EE
Confidence            43

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=9.8e-31  Score=207.08  Aligned_cols=239  Identities=22%  Similarity=0.179  Sum_probs=181.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+|++|+||+|+|||..++..+.+++-.....+++....+ ........++.......|++...-..++++..++.+ +.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~-gk   82 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG-GK   82 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC-Cc
Confidence            5788999999999998888887777644433333222222 111111223334444567777777788888888887 78


Q ss_pred             ccEEEeccccccc-cC--CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           97 LNILVNNAALVVM-KR--ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        97 id~lv~~ag~~~~-~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      .|++|||||...+ ..  .+..+.++|++.++.|++|.+.+.+.++|.+++.+ .+.+|||||.++..++++|+.||.+|
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~K  162 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSK  162 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhH
Confidence            9999999997643 22  33678999999999999999999999999999884 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch--hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL--LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      +|+++|++.+|.|-. .++++.++.||.+||+|.....+..  .......+......+++.+|...++.+.+|+-... +
T Consensus       163 aAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-f  240 (253)
T KOG1204|consen  163 AARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-F  240 (253)
T ss_pred             HHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-c
Confidence            999999999999866 7899999999999999865432211  11222333334455678899999999999994332 8


Q ss_pred             ccccEEEeC
Q 024551          251 ITGQVISID  259 (266)
Q Consensus       251 ~~G~~l~vd  259 (266)
                      ++|+++...
T Consensus       241 ~sG~~vdy~  249 (253)
T KOG1204|consen  241 VSGQHVDYY  249 (253)
T ss_pred             ccccccccc
Confidence            999987643

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=1.3e-26  Score=205.24  Aligned_cols=197  Identities=22%  Similarity=0.223  Sum_probs=153.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||+++||||++|||++++++|+++|++|++++|+++++++..   ......+..+.+|++|++++.+.+       
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~~~v~~v~~Dvsd~~~v~~~l-------  243 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGEDLPVKTLHWQVGQEAALAELL-------  243 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcCCCeEEEEeeCCCHHHHHHHh-------
Confidence            5678999999999999999999999999999999999887654322   222345678899999998875532       


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC----CeEEEEecCCCCCCCCCchhhh
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN----ASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~----g~iv~vss~~~~~~~~~~~~y~  169 (266)
                       +++|++|||||....   .+.+.+++++.+++|+.++++++++++|.|++++.    +.+|++|+ +. ...+....|+
T Consensus       244 -~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~  317 (406)
T PRK07424        244 -EKVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYE  317 (406)
T ss_pred             -CCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHH
Confidence             469999999997543   35688999999999999999999999999987642    34555554 33 3334567899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+|+.+|++ +..+.  .++.|..+.||+++|++.+.                    ...+||++|+.+++.+.....
T Consensus       318 ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~~--------------------~~~spe~vA~~il~~i~~~~~  374 (406)
T PRK07424        318 LSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNPI--------------------GVMSADWVAKQILKLAKRDFR  374 (406)
T ss_pred             HHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCcC--------------------CCCCHHHHHHHHHHHHHCCCC
Confidence            99999999985 43332  45777888999999876321                    135899999999999976544

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.95  E-value=2.3e-26  Score=237.39  Aligned_cols=183  Identities=20%  Similarity=0.232  Sum_probs=161.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCCh-------------------------------------------
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQ-------------------------------------------   52 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~-------------------------------------------   52 (266)
                      +||++|||||++|||+++|++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6999999999999999999999998 69999999982                                           


Q ss_pred             ----hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccch
Q 024551           53 ----NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV  128 (266)
Q Consensus        53 ----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~  128 (266)
                          ..+++..+.+.+.|.++.++.||++|.++++++++++.+.  ++||+||||||+...+.+.+.+.++|++.+++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence                1122334445556788999999999999999999999876  4799999999998888899999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCC
Q 024551          129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP  207 (266)
Q Consensus       129 ~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~  207 (266)
                      .|.+++++++.+.+    .++||++||..+..+.+++..|+++|++++++++.++.++.  ++||++|+||+++|+|..
T Consensus      2154 ~G~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2154 DGLLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            99999988886533    35899999999999999999999999999999999999875  489999999999998864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.94  E-value=6.2e-25  Score=173.72  Aligned_cols=175  Identities=23%  Similarity=0.312  Sum_probs=150.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHH---HHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINER---IQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      |+++||||+++||++++++|+++|+ .|++++|+++..+..   .+++.+.+.++.++.+|++++++++++++++.+.+ 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL-   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            6899999999999999999999997 588888876544333   34555556788899999999999999999998887 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++||++|......+.+.+.++|++.+++|+.+++++.+.+.    +.+.+++++++|..+..+.+....|+++|++
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~  155 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTR----DLPLDFFVLFSSVAGVLGNPGQANYAAANAF  155 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhc----cCCcceEEEEccHHHhcCCCCchhhHHHHHH
Confidence            789999999998776677888999999999999999999999883    3446899999999998889999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVN  202 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~  202 (266)
                      ++.+++.++    ..|+++..+.||++.
T Consensus       156 ~~~~~~~~~----~~~~~~~~~~~g~~~  179 (180)
T smart00822      156 LDALAAHRR----ARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHH----hcCCceEEEeecccc
Confidence            999997754    458889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.93  E-value=3.9e-24  Score=194.08  Aligned_cols=222  Identities=14%  Similarity=0.132  Sum_probs=165.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-----C----CeeEEEeccCCCHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-----G----FKVTGSVCDLSFGDQREKL   85 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-----~----~~~~~~~~D~~~~~~i~~~   85 (266)
                      ..+||+++||||+|+||++++++|+++|++|++++|+.+.++.+.+++.+.     +    .++.++.+|++|.+++.+.
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            357999999999999999999999999999999999999888777765431     1    3588999999999887653


Q ss_pred             HHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCC
Q 024551           86 IETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPR  164 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~  164 (266)
                             + +.+|+||||+|....      ...+|...+++|+.+..++++++.    +.+.++||++||.++. .+.+.
T Consensus       157 -------L-ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~VSSiga~~~g~p~  218 (576)
T PLN03209        157 -------L-GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFILVTSLGTNKVGFPA  218 (576)
T ss_pred             -------h-cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEEEccchhcccCccc
Confidence                   2 469999999996532      122477789999999999988874    4456899999998764 23322


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                       ..|. +|.++..+.+.+..++...||+++.|+||++.|++........ .   .......+++|.++.+|||+.++|++
T Consensus       219 -~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~-v---~~~~~d~~~gr~isreDVA~vVvfLa  292 (576)
T PLN03209        219 -AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHN-L---TLSEEDTLFGGQVSNLQVAELMACMA  292 (576)
T ss_pred             -cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccc-e---eeccccccCCCccCHHHHHHHHHHHH
Confidence             2344 7888989999999999999999999999999987533210000 0   11122356788899999999999999


Q ss_pred             cCCCCCccccEEEeCCC
Q 024551          245 LPAASYITGQVISIDGG  261 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG  261 (266)
                      ++... -.++++.+-.+
T Consensus       293 sd~~a-s~~kvvevi~~  308 (576)
T PLN03209        293 KNRRL-SYCKVVEVIAE  308 (576)
T ss_pred             cCchh-ccceEEEEEeC
Confidence            85432 23444544433

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.91  E-value=1.7e-22  Score=175.91  Aligned_cols=205  Identities=18%  Similarity=0.132  Sum_probs=154.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++||++|||||+++||++++++|+++|  ++|++++|+......+.+.+.  ..++.++.+|++|++++.++++      
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence            468999999999999999999999986  789999998765544444432  2468899999999999887764      


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                        .+|++||+||.... +..+.+   .++.+++|+.+++++++++.+    .+.++||++||.....   +...|+.||+
T Consensus        74 --~iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~---p~~~Y~~sK~  140 (324)
T TIGR03589        74 --GVDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAAN---PINLYGATKL  140 (324)
T ss_pred             --cCCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCC---CCCHHHHHHH
Confidence              38999999996532 222222   246899999999999998853    4457999999976443   3467999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc---CCC------CCCCCccchHHHHHHHh
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK---TPL------ARSAEPNEISPLVAFLC  244 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~eia~~~~~l~  244 (266)
                      +.+.+++.++.++...|++++++.||++..+...  .-....   ......   .++      +.+..++|++++++.++
T Consensus       141 ~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~--~i~~~~---~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al  215 (324)
T TIGR03589       141 ASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS--VVPFFK---SLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSL  215 (324)
T ss_pred             HHHHHHHHHHhhccccCcEEEEEeecceeCCCCC--cHHHHH---HHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHH
Confidence            9999999998888888999999999999986321  111111   111111   121      34678999999999888


Q ss_pred             cC
Q 024551          245 LP  246 (266)
Q Consensus       245 s~  246 (266)
                      ..
T Consensus       216 ~~  217 (324)
T TIGR03589       216 ER  217 (324)
T ss_pred             hh
Confidence            53

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.90  E-value=4.3e-23  Score=165.92  Aligned_cols=193  Identities=21%  Similarity=0.221  Sum_probs=167.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCC-----CeEEEecCChhHHHHHHHHHHhcC----CeeEEEeccCCCHHHHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFG-----ASVHTCGRDQNMINERIQEWESKG----FKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G-----~~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      .|+++|||++||||.+++++|.+..     .++++++|+.++.++.+..+.+..    .++.++++|+++..++.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            5899999999999999999998764     337789999999999999998763    4788999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCC---------------------------CCCHHHHHHHhccchhhHHHHHHHHHHH
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRAT---------------------------EYTLEEYSSVMSTNVESSYHLCQLAHPL  141 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~---------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~  141 (266)
                      +.++| .++|+++.|||++....+.                           ..+.+++...|+.|+.|+|++.+.+.|+
T Consensus        83 i~~rf-~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   83 IKQRF-QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHh-hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            99999 8999999999976422111                           2366889999999999999999999999


Q ss_pred             HHhcCCCeEEEEecCCCCC---------CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc
Q 024551          142 LKASGNASIVFMSSVAGAI---------SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN  211 (266)
Q Consensus       142 m~~~~~g~iv~vss~~~~~---------~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~  211 (266)
                      +...++..+|++||..+..         -..+-.+|..||.+++-+.-.+-+.+.+.|+.-+.++||...|.+......
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            9888878999999988754         234667999999999999999999999999999999999999887665443

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=7.4e-22  Score=171.90  Aligned_cols=223  Identities=19%  Similarity=0.190  Sum_probs=161.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+..+.....+...  ..++.++.+|++|+++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            5799999999999999999999999999999888876654443322221  2468899999999998887775       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-----------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-----------  163 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-----------  163 (266)
                       .+|++||+||....    ..+.+.+.+.+++|+.+++++++++.+.+   +.++||++||..++.+..           
T Consensus        77 -~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E  148 (325)
T PLN02989         77 -GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDE  148 (325)
T ss_pred             -CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCc
Confidence             38999999996432    22345578899999999999999987643   246999999986643211           


Q ss_pred             -----------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHH-hcCCC----
Q 024551          164 -----------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLI-AKTPL----  227 (266)
Q Consensus       164 -----------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~----  227 (266)
                                 ....|+.||.+.+.+++.++.+   .|+.++.+.|+.+..|...+... .......... ...+.    
T Consensus       149 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~-~~~~~i~~~~~~~~~~~~~~  224 (325)
T PLN02989        149 TFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLN-FSVAVIVELMKGKNPFNTTH  224 (325)
T ss_pred             CCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCC-chHHHHHHHHcCCCCCCCcC
Confidence                       0246999999999999988765   47999999999999886543211 1111111221 12232    


Q ss_pred             CCCCCccchHHHHHHHhcCCCCCccccEEEeCCC
Q 024551          228 ARSAEPNEISPLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       228 ~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      +++..++|+|++++.++....  ..| .++++|+
T Consensus       225 r~~i~v~Dva~a~~~~l~~~~--~~~-~~ni~~~  255 (325)
T PLN02989        225 HRFVDVRDVALAHVKALETPS--ANG-RYIIDGP  255 (325)
T ss_pred             cCeeEHHHHHHHHHHHhcCcc--cCc-eEEEecC
Confidence            467778999999998875432  234 5677544

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=2.5e-22  Score=160.56  Aligned_cols=174  Identities=22%  Similarity=0.335  Sum_probs=140.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC-eEEEecCCh---hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQ---NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~-~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++||||+.+|||..+++.|+++|. +|++++|+.   ...++..+++++.+.++.+++||++|+++++++++++.+.+ +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-G   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-S
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-C
Confidence            789999999999999999999985 699999982   34567888888889999999999999999999999999998 8


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      +|+.+||+||......+.+.+.+++++.+...+.+.+++.+.+.    ......+|++||.++..+.++...|+++.+.+
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~----~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~l  156 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALE----NRPLDFFILFSSISSLLGGPGQSAYAAANAFL  156 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHT----TTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHH
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhh----cCCCCeEEEECChhHhccCcchHhHHHHHHHH
Confidence            99999999999888899999999999999999999999988774    45567999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCccc
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVN  202 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~  202 (266)
                      +.|++....    .|..+.+|..|+.+
T Consensus       157 da~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  157 DALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHHh----CCCCEEEEEccccC
Confidence            999987644    46778888887643

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.90  E-value=7.7e-22  Score=170.91  Aligned_cols=188  Identities=18%  Similarity=0.099  Sum_probs=144.7

Q ss_pred             CCCCEEEEecCCCchHHH--HHHHHHHCCCeEEEecCChhH------------HHHHHHHHHhcCCeeEEEeccCCCHHH
Q 024551           16 LRGMTALVTGGTRGIGYA--IVEELARFGASVHTCGRDQNM------------INERIQEWESKGFKVTGSVCDLSFGDQ   81 (266)
Q Consensus        16 ~~~k~vlItGas~giG~a--ia~~la~~G~~v~~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~D~~~~~~   81 (266)
                      -.+|++||||+++|||.+  +|++| ++|++|+++++..+.            .+.+.+.+.+.+..+..++||++++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            347999999999999999  89999 999999888854322            123445555556678889999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEeccccccccC-----------------CC-----------------CCCHHHHHHHhccc
Q 024551           82 REKLIETVSSVFDGKLNILVNNAALVVMKR-----------------AT-----------------EYTLEEYSSVMSTN  127 (266)
Q Consensus        82 i~~~~~~~~~~~~~~id~lv~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~n  127 (266)
                      ++++++++.+.+ |++|+||||+|......                 +.                 ..+.++++.++.+.
T Consensus       118 v~~lie~I~e~~-G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vM  196 (398)
T PRK13656        118 KQKVIELIKQDL-GQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVM  196 (398)
T ss_pred             HHHHHHHHHHhc-CCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhh
Confidence            999999999999 88999999999763211                 11                 23445555554443


Q ss_pred             hh-hHHHHHH--HHHHHHHhcCCCeEEEEecCCCCCCCCCc--hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCccc
Q 024551          128 VE-SSYHLCQ--LAHPLLKASGNASIVFMSSVAGAISIPRL--SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVN  202 (266)
Q Consensus       128 ~~-~~~~l~~--~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~  202 (266)
                      =. .-..+++  ...+.|.+  ++++|.+|..+.....|.+  +.-+.+|++|+.-+|.++.+|++.|||+|++.+|++.
T Consensus       197 ggedw~~Wi~al~~a~lla~--g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~  274 (398)
T PRK13656        197 GGEDWELWIDALDEAGVLAE--GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVV  274 (398)
T ss_pred             ccchHHHHHHHHHhcccccC--CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCccc
Confidence            33 1123333  33445533  5899999999888888877  4889999999999999999999999999999999999


Q ss_pred             CCCCC
Q 024551          203 TQISP  207 (266)
Q Consensus       203 t~~~~  207 (266)
                      |.-..
T Consensus       275 T~Ass  279 (398)
T PRK13656        275 TQASS  279 (398)
T ss_pred             chhhh
Confidence            96543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.89  E-value=2e-21  Score=170.89  Aligned_cols=230  Identities=15%  Similarity=0.078  Sum_probs=163.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++||++|||||+|+||++++++|+++|++|++++|+........+.+.. ..++.++.+|++|.+++.+++++.      
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~------   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL-AKKIEDHFGDIRDAAKLRKAIAEF------   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh-cCCceEEEccCCCHHHHHHHHhhc------
Confidence            4689999999999999999999999999999999987654444333322 346778899999999998888853      


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC------------CCC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI------------SIP  163 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~------------~~~  163 (266)
                      ++|++||+|+....    ..+.+++...+++|+.+++++++++.+   ....+++|++||...+.            +..
T Consensus        75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        75 KPEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRA---IGSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CCCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHh---cCCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            58999999995422    234556778899999999999988742   12246999999964332            123


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhcc----CCcEEEEEecCcccCCCCCCCccchhHHHH-HHHHhc--------CCCCCC
Q 024551          164 RLSAYAASKGAINQLTKNLACEWAT----DSIRVNAVSPWAVNTQISPPDLNDLLVQEY-VKLIAK--------TPLARS  230 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~----~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~  230 (266)
                      +...|+.+|.+.+.+++.++.++.+    +|++++.+.|+.+..+.....  ....... ......        ...+.+
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~--~~~~~~~~~~~~~g~~~~~~~g~~~rd~  225 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE--DRLIPDVIRAFSSNKIVIIRNPDATRPW  225 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh--hhhhHHHHHHHhcCCCeEECCCCcccce
Confidence            4568999999999999999988755    489999999999988642111  1111111 111111        123456


Q ss_pred             CCccchHHHHHHHhcCC--CCCccccEEEeCCC
Q 024551          231 AEPNEISPLVAFLCLPA--ASYITGQVISIDGG  261 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~~--~~~~~G~~l~vdgG  261 (266)
                      ...+|++++++.++...  .....|+.+++-.|
T Consensus       226 i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       226 QHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             eeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            77899999998777421  11123567888654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06720 hypothetical protein; Provisional

Probab=99.88  E-value=4.2e-21  Score=151.29  Aligned_cols=143  Identities=20%  Similarity=0.216  Sum_probs=121.2

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|+++.++++++++++.+.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            36689999999999999999999999999999999999998888888888766677888999999999999999999998


Q ss_pred             cCCcccEEEecccccccc-CCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-------CCeEEEEecCCCC
Q 024551           93 FDGKLNILVNNAALVVMK-RATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-------NASIVFMSSVAGA  159 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-------~g~iv~vss~~~~  159 (266)
                      + +++|++|||||..... .+.+.+.++ ++  .+|+.+.++.++.+.+.|.+++       .||+..||+.++.
T Consensus        91 ~-G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         91 F-SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             c-CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            8 7899999999987643 444445444 33  7888888999999999987654       5888888887654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=4.9e-20  Score=160.28  Aligned_cols=223  Identities=18%  Similarity=0.148  Sum_probs=156.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh--cCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES--KGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      -+||+++||||+|.||++++++|+++|++|+++.|+.+..+...+....  ...++.++.+|++|+++++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            5689999999999999999999999999999999987654443332221  12468889999999998887776      


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-CC----------
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-SI----------  162 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-~~----------  162 (266)
                        .+|++||+|+..... .    .+...+.+++|+.++.++++++...   .+.++||++||..+.. +.          
T Consensus        77 --~~d~vih~A~~~~~~-~----~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~  146 (322)
T PLN02986         77 --GCDAVFHTASPVFFT-V----KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVD  146 (322)
T ss_pred             --CCCEEEEeCCCcCCC-C----CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcC
Confidence              389999999964321 1    1223567899999999998887421   2346999999986531 11          


Q ss_pred             ------C-----CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC-----C
Q 024551          163 ------P-----RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-----P  226 (266)
Q Consensus       163 ------~-----~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-----~  226 (266)
                            |     ....|+.||.+.+.+++.+..+   +|++++.++|+.+.++...+.... ............     .
T Consensus       147 E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~-~~~~~~~~~~g~~~~~~~  222 (322)
T PLN02986        147 ETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLNF-SVELIVDFINGKNLFNNR  222 (322)
T ss_pred             cccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCCc-cHHHHHHHHcCCCCCCCc
Confidence                  0     1356999999999999888765   479999999999999875432110 011111111111     1


Q ss_pred             CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCC
Q 024551          227 LARSAEPNEISPLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       227 ~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      .+.+..++|+|++++.++....  ..| .++++|.
T Consensus       223 ~~~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~  254 (322)
T PLN02986        223 FYRFVDVRDVALAHIKALETPS--ANG-RYIIDGP  254 (322)
T ss_pred             CcceeEHHHHHHHHHHHhcCcc--cCC-cEEEecC
Confidence            2357889999999998885432  234 5777543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.85  E-value=6.6e-20  Score=160.65  Aligned_cols=230  Identities=15%  Similarity=0.059  Sum_probs=154.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-----HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-----INERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.....+.++.++.+|++|.+++.++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            5778999999999999999999999999999999887542     22222111112346889999999999999888854


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC-CeEEEEecCCCCCC-------
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSVAGAIS-------  161 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~vss~~~~~~-------  161 (266)
                            .+|+|||+|+.....    ...+..+..+++|+.++.++++++.+.+.+++. -++|++||...+..       
T Consensus        83 ------~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E  152 (340)
T PLN02653         83 ------KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSE  152 (340)
T ss_pred             ------CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCC
Confidence                  489999999975432    123345677899999999999999877654311 27888887533221       


Q ss_pred             ---CCCchhhhhhHHHHHHHHHHHHHHhcc---CCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc----------C
Q 024551          162 ---IPRLSAYAASKGAINQLTKNLACEWAT---DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK----------T  225 (266)
Q Consensus       162 ---~~~~~~y~~sK~al~~~~~~~a~el~~---~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~----------~  225 (266)
                         ..+...|+.||.+.+.+++.++.+++-   .++.++.+.|+...+ +    ...............          .
T Consensus       153 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~g~g~  227 (340)
T PLN02653        153 TTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGEN-F----VTRKITRAVGRIKVGLQKKLFLGNLD  227 (340)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcc-c----chhHHHHHHHHHHcCCCCceEeCCCc
Confidence               123568999999999999999887642   233445555653221 1    111111001111111          1


Q ss_pred             CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          226 PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       226 ~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ..+.+...+|++++++.++...    .+..+++.+|..
T Consensus       228 ~~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~  261 (340)
T PLN02653        228 ASRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEES  261 (340)
T ss_pred             ceecceeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Confidence            2245678999999999988532    145577776653

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.85  E-value=5.8e-19  Score=155.49  Aligned_cols=216  Identities=19%  Similarity=0.168  Sum_probs=153.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ..+++++|||||+|.||++++++|+++|++|++++|+.+..+.+.+.+.. +.++.++.+|++|.+++.++++       
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------
Confidence            35688999999999999999999999999999999987766655555433 4578899999999998877764       


Q ss_pred             CcccEEEeccccccccC-CCCCCHHHH--HHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC---------
Q 024551           95 GKLNILVNNAALVVMKR-ATEYTLEEY--SSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI---------  162 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~---------  162 (266)
                       .+|+|||+|+...... ....+.+.+  ...++.|+.++.++++++.+..   +.++||++||.+.+...         
T Consensus        79 -~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         79 -GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             -CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCc
Confidence             3799999999764321 122233333  4567888899999998885431   24699999997654311         


Q ss_pred             ----------------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC
Q 024551          163 ----------------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP  226 (266)
Q Consensus       163 ----------------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  226 (266)
                                      +....|+.||.+.+.+++.++.+   .|+++..+.|+.+..|......+...............
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~  231 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSK  231 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcc
Confidence                            01137999999999999988765   47999999999998886543322211111111101000


Q ss_pred             -------------CCCCCCccchHHHHHHHhc
Q 024551          227 -------------LARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       227 -------------~~~~~~~~eia~~~~~l~s  245 (266)
                                   .+.+..++|++++++.++.
T Consensus       232 ~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~  263 (353)
T PLN02896        232 LFSILSAVNSRMGSIALVHIEDICDAHIFLME  263 (353)
T ss_pred             ccccccccccccCceeEEeHHHHHHHHHHHHh
Confidence                         1246789999999999885

>PLN02650 dihydroflavonol-4-reductase

Probab=99.85  E-value=2.2e-19  Score=158.01  Aligned_cols=211  Identities=17%  Similarity=0.125  Sum_probs=151.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ..|++|||||+|.||++++++|+++|++|++++|+.+..+.....+...  ..++.++..|++|.+.++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            5689999999999999999999999999999999876655544333221  1357889999999988877765       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC----C-------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI----P-------  163 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~----~-------  163 (266)
                       .+|++||+|+.....   .  .+.++..+++|+.+++++++++.+..   ..++||++||.....+.    +       
T Consensus        77 -~~d~ViH~A~~~~~~---~--~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~  147 (351)
T PLN02650         77 -GCTGVFHVATPMDFE---S--KDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCW  147 (351)
T ss_pred             -CCCEEEEeCCCCCCC---C--CCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccC
Confidence             379999999864321   1  12235678999999999999885431   13589999997543211    0       


Q ss_pred             -----------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc------CC
Q 024551          164 -----------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK------TP  226 (266)
Q Consensus       164 -----------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~  226 (266)
                                 ....|+.||.+.+.+++.++.+   +|++++.+.|+.+.+|....................      ..
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (351)
T PLN02650        148 SDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIK  224 (351)
T ss_pred             CchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCC
Confidence                       1237999999999999988766   589999999999999865443222222111111111      12


Q ss_pred             CCCCCCccchHHHHHHHhcC
Q 024551          227 LARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       227 ~~~~~~~~eia~~~~~l~s~  246 (266)
                      .+.+..++|+++++++++..
T Consensus       225 ~r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        225 QGQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             CcceeeHHHHHHHHHHHhcC
Confidence            35778999999999999864

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.85  E-value=3.6e-19  Score=150.86  Aligned_cols=224  Identities=19%  Similarity=0.166  Sum_probs=168.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHH--HHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE--RIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|+||||||-||.+++++|+++||+|..+.|+++..+.  ....++....+...+..|++|+++.+.+++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            78999999999999999999999999999999999887443  355555555679999999999999999988       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHH-HHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCC-CC-------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYS-SVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISI-PR-------  164 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~-~~-------  164 (266)
                      | .|+|+|.|........   +   .+ +.++..+.|+.++++++.    +.+ -.|||++||.++.... +.       
T Consensus        78 g-cdgVfH~Asp~~~~~~---~---~e~~li~pav~Gt~nVL~ac~----~~~sVkrvV~TSS~aAv~~~~~~~~~~~vv  146 (327)
T KOG1502|consen   78 G-CDGVFHTASPVDFDLE---D---PEKELIDPAVKGTKNVLEACK----KTKSVKRVVYTSSTAAVRYNGPNIGENSVV  146 (327)
T ss_pred             C-CCEEEEeCccCCCCCC---C---cHHhhhhHHHHHHHHHHHHHh----ccCCcceEEEeccHHHhccCCcCCCCCccc
Confidence            4 8999999986543221   1   33 689999999999999984    332 4699999999987644 21       


Q ss_pred             ----c----------hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC---CC
Q 024551          165 ----L----------SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT---PL  227 (266)
Q Consensus       165 ----~----------~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---~~  227 (266)
                          |          ..|+.||..-+.-+..+++|   +|+....|+|+.|-.|...+.........+..+....   +-
T Consensus       147 dE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n  223 (327)
T KOG1502|consen  147 DEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPN  223 (327)
T ss_pred             ccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCC
Confidence                1          26888988888777777766   5799999999999999888743332222222221111   11


Q ss_pred             --CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          228 --ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       228 --~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                        ..+.+.+|+|.+.+++.....  -.|++|-+....+
T Consensus       224 ~~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~~~~  259 (327)
T KOG1502|consen  224 FWLAFVDVRDVALAHVLALEKPS--AKGRYICVGEVVS  259 (327)
T ss_pred             CceeeEeHHHHHHHHHHHHcCcc--cCceEEEecCccc
Confidence              235788999999999996443  4588887766543

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=1.8e-19  Score=155.06  Aligned_cols=207  Identities=11%  Similarity=0.007  Sum_probs=145.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh--HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN--MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +-++|+++||||+|+||++++++|+++|++|+++.|+.+  ..++....+...+.++.++.+|++|.+++.+++.     
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-----
Confidence            345789999999999999999999999999999998643  2223333332224468889999999998866543     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-C--------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-P--------  163 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-~--------  163 (266)
                         ..|.++|.++....     .+ +.+++.+++|+.+++++++++.+.+   +.++||++||.++.... +        
T Consensus        78 ---~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~  145 (297)
T PLN02583         78 ---GCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDV  145 (297)
T ss_pred             ---CCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCC
Confidence               37888887653211     11 2467899999999999999987643   24699999998664211 0        


Q ss_pred             ---Cc----------hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC--CC
Q 024551          164 ---RL----------SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP--LA  228 (266)
Q Consensus       164 ---~~----------~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~  228 (266)
                         .+          ..|+.||...+.+++.++.+   +|++++.++|+.+.++.......  ..   .......+  ..
T Consensus       146 ~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~--~~---~~~~~~~~~~~~  217 (297)
T PLN02583        146 DERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNP--YL---KGAAQMYENGVL  217 (297)
T ss_pred             CcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchh--hh---cCCcccCcccCc
Confidence               01          15999999999999887655   48999999999999876433211  00   00000011  12


Q ss_pred             CCCCccchHHHHHHHhcC
Q 024551          229 RSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~  246 (266)
                      .+..++|+|++++..+..
T Consensus       218 ~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        218 VTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             ceEEHHHHHHHHHHHhcC
Confidence            367889999999988853

>PLN02214 cinnamoyl-CoA reductase

Probab=99.84  E-value=6.2e-19  Score=154.65  Aligned_cols=206  Identities=17%  Similarity=0.151  Sum_probs=148.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHH-HHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE-RIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++|+++||||+|.||++++++|+++|++|++++|+.+.... ....+.....++.++.+|++|++++.++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            468899999999999999999999999999999998764322 122333223468889999999998887765       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC----C-------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI----P-------  163 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~----~-------  163 (266)
                       .+|+|||+|+...         +++++.+++|+.++.++++++.    +.+.++||++||..+..+.    +       
T Consensus        81 -~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~----~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~  146 (342)
T PLN02214         81 -GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAA----EAKVKRVVITSSIGAVYMDPNRDPEAVVDES  146 (342)
T ss_pred             -cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeccceeeeccCCCCCCcccCcc
Confidence             3899999999641         1356789999999999998874    3445699999996543211    0       


Q ss_pred             ----------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc-C-----CC
Q 024551          164 ----------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK-T-----PL  227 (266)
Q Consensus       164 ----------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~-----~~  227 (266)
                                ....|+.||.+.+.+++.++.+   +|+++..+.|+.+..+............ ....... .     ..
T Consensus       147 ~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~~~~-~~~~~~g~~~~~~~~~  222 (342)
T PLN02214        147 CWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINASLYH-VLKYLTGSAKTYANLT  222 (342)
T ss_pred             cCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHH-HHHHHcCCcccCCCCC
Confidence                      1247999999999999888766   4799999999999887543321111111 1111111 1     12


Q ss_pred             CCCCCccchHHHHHHHhcC
Q 024551          228 ARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       228 ~~~~~~~eia~~~~~l~s~  246 (266)
                      +.+..++|+|++++.++..
T Consensus       223 ~~~i~V~Dva~a~~~al~~  241 (342)
T PLN02214        223 QAYVDVRDVALAHVLVYEA  241 (342)
T ss_pred             cCeeEHHHHHHHHHHHHhC
Confidence            3567899999999988853

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.84  E-value=8e-19  Score=158.63  Aligned_cols=239  Identities=14%  Similarity=0.081  Sum_probs=162.1

Q ss_pred             CCCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh---H----H---------HHHHHHHH-hcCC
Q 024551            5 AEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN---M----I---------NERIQEWE-SKGF   67 (266)
Q Consensus         5 ~~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~---~----~---------~~~~~~l~-~~~~   67 (266)
                      +.|-.+.....+++|++|||||+|+||++++++|+++|++|++++|...   .    .         .+..+.+. ..+.
T Consensus        34 ~~~~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  113 (442)
T PLN02572         34 ATPSAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGK  113 (442)
T ss_pred             cCCCCCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCC
Confidence            3455556667889999999999999999999999999999998764211   0    0         01111111 1234


Q ss_pred             eeEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC
Q 024551           68 KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN  147 (266)
Q Consensus        68 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~  147 (266)
                      ++.++.+|++|.+++.++++..      ++|+|||+|+... ......+.++++..+++|+.+++++++++..    .+.
T Consensus       114 ~v~~v~~Dl~d~~~v~~~l~~~------~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~----~gv  182 (442)
T PLN02572        114 EIELYVGDICDFEFLSEAFKSF------EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKE----FAP  182 (442)
T ss_pred             cceEEECCCCCHHHHHHHHHhC------CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHH----hCC
Confidence            6889999999999998888752      5899999997643 2333345566788899999999999988743    332


Q ss_pred             -CeEEEEecCCCCCC------------------------CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCccc
Q 024551          148 -ASIVFMSSVAGAIS------------------------IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVN  202 (266)
Q Consensus       148 -g~iv~vss~~~~~~------------------------~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~  202 (266)
                       .++|++||...+..                        ..+...|+.||.+.+.+++.++..   +|+.+..+.|+.+.
T Consensus       183 ~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vy  259 (442)
T PLN02572        183 DCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVY  259 (442)
T ss_pred             CccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEeccccc
Confidence             48999998764421                        112357999999999999887655   57999999999998


Q ss_pred             CCCCCCCc-----------c---chhHHH-HHHHHhcCC---------CCCCCCccchHHHHHHHhcCCCCCccc--cEE
Q 024551          203 TQISPPDL-----------N---DLLVQE-YVKLIAKTP---------LARSAEPNEISPLVAFLCLPAASYITG--QVI  256 (266)
Q Consensus       203 t~~~~~~~-----------~---~~~~~~-~~~~~~~~~---------~~~~~~~~eia~~~~~l~s~~~~~~~G--~~l  256 (266)
                      .+......           .   ...... ..+.....+         .+.+..++|++++++.++....  ..|  .++
T Consensus       260 Gp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~  337 (442)
T PLN02572        260 GVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVF  337 (442)
T ss_pred             CCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEE
Confidence            87543210           0   011111 111111111         2366788999999998885321  234  356


Q ss_pred             EeC
Q 024551          257 SID  259 (266)
Q Consensus       257 ~vd  259 (266)
                      ++.
T Consensus       338 Nig  340 (442)
T PLN02572        338 NQF  340 (442)
T ss_pred             EeC
Confidence            664

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.83  E-value=7.8e-19  Score=154.72  Aligned_cols=225  Identities=13%  Similarity=0.127  Sum_probs=155.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEE-EecCChhH--HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNM--INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~-~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      |++|||||+|+||++++++|.++|+.++ +++|....  ..... .+. ...++.++.+|++|.++++++++.      .
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~   73 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PVA-QSERFAFEKVDICDRAELARVFTE------H   73 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hcc-cCCceEEEECCCcChHHHHHHHhh------c
Confidence            6899999999999999999999998855 44543321  11111 111 124677889999999999888774      2


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHH---h--cCCCeEEEEecCCCCC----------
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLK---A--SGNASIVFMSSVAGAI----------  160 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~---~--~~~g~iv~vss~~~~~----------  160 (266)
                      ++|+|||+||....    ..+.++++..+++|+.+++++++++.+.|.   .  .+..++|++||...+.          
T Consensus        74 ~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  149 (355)
T PRK10217         74 QPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT  149 (355)
T ss_pred             CCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence            58999999996532    223456788999999999999999987642   1  2235899999864322          


Q ss_pred             ---CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC--C-------CC
Q 024551          161 ---SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT--P-------LA  228 (266)
Q Consensus       161 ---~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~-------~~  228 (266)
                         +..+...|+.||.+.+.+++.++.++   ++++..+.|+.+..+.....  .-............  +       .+
T Consensus       150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~--~~~~~~~~~~~~~~~~~~~g~g~~~~  224 (355)
T PRK10217        150 ETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKPLPVYGNGQQIR  224 (355)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcc--cHHHHHHHHHhcCCCceEeCCCCeee
Confidence               12245689999999999999987774   67888888888877653211  10011111111111  1       23


Q ss_pred             CCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          229 RSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      .+...+|++.++..++...   ..|..+++.+|..
T Consensus       225 ~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~  256 (355)
T PRK10217        225 DWLYVEDHARALYCVATTG---KVGETYNIGGHNE  256 (355)
T ss_pred             CcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCc
Confidence            5688999999998887532   3577888887754

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.83  E-value=1.7e-18  Score=151.57  Aligned_cols=211  Identities=18%  Similarity=0.136  Sum_probs=149.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHH--HHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ--EWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++|+++||||+|.||++++++|+++|++|+++.|+.+.......  .+.. ..++.++.+|++|++++.++++     
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh-----
Confidence            3568999999999999999999999999999988887654433221  1211 1367889999999988777654     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------  161 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------  161 (266)
                         ++|++||+|+...   ..  ..+.+...+++|+.++.++++++.+.   .+.++||++||.+.+..           
T Consensus        80 ---~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~  148 (338)
T PLN00198         80 ---GCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMN  148 (338)
T ss_pred             ---cCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceec
Confidence               4799999998532   11  12234567899999999999988542   23469999999765431           


Q ss_pred             -------------CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc----
Q 024551          162 -------------IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK----  224 (266)
Q Consensus       162 -------------~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~----  224 (266)
                                   .++...|+.||.+.+.+++.++.+   +|+.+..+.|+.+..|.......... .........    
T Consensus       149 E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~-~~~~~~~~~~~~~  224 (338)
T PLN00198        149 EKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSL-SLAMSLITGNEFL  224 (338)
T ss_pred             cccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcH-HHHHHHHcCCccc
Confidence                         123456999999999999988765   57999999999998876432221111 000111110    


Q ss_pred             ------CC----CCCCCCccchHHHHHHHhcC
Q 024551          225 ------TP----LARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       225 ------~~----~~~~~~~~eia~~~~~l~s~  246 (266)
                            .+    .+.+..++|++++++.++..
T Consensus       225 ~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        225 INGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             cccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence                  11    13578899999999988864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=2.3e-18  Score=149.56  Aligned_cols=210  Identities=17%  Similarity=0.130  Sum_probs=147.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh--cCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES--KGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +||++|||||+|.||++++++|+++|++|++++|+.+...........  ...++.++.+|++|++++..+++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            579999999999999999999999999999999886543332222111  12478899999999988777665       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC--CCCC----------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG--AISI----------  162 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~--~~~~----------  162 (266)
                       .+|++||+|+..... ..    +..++.+++|+.++.++++++....   +..+||++||.++  +.+.          
T Consensus        76 -~~d~Vih~A~~~~~~-~~----~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~E  146 (322)
T PLN02662         76 -GCEGVFHTASPFYHD-VT----DPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVDE  146 (322)
T ss_pred             -CCCEEEEeCCcccCC-CC----ChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCCc
Confidence             379999999864321 11    1124678999999999999875321   3469999999753  2111          


Q ss_pred             -----CC-----chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc---C--CC
Q 024551          163 -----PR-----LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK---T--PL  227 (266)
Q Consensus       163 -----~~-----~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~--~~  227 (266)
                           |.     ...|+.+|.+.+.+++.+..+   +|++++.+.|+.+.++...+..... .....+....   .  ..
T Consensus       147 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~-~~~~~~~~~~~~~~~~~~  222 (322)
T PLN02662        147 TWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTS-AEAILNLINGAQTFPNAS  222 (322)
T ss_pred             ccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCch-HHHHHHHhcCCccCCCCC
Confidence                 10     137999999999999877655   5799999999999998654321111 1111111111   1  12


Q ss_pred             CCCCCccchHHHHHHHhcC
Q 024551          228 ARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       228 ~~~~~~~eia~~~~~l~s~  246 (266)
                      ..+..++|+|++++.++..
T Consensus       223 ~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        223 YRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             cCeEEHHHHHHHHHHHhcC
Confidence            4578899999999988854

>PLN02240 UDP-glucose 4-epimerase

Probab=99.81  E-value=5e-18  Score=149.32  Aligned_cols=234  Identities=16%  Similarity=0.128  Sum_probs=153.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHH----HHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE----RIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~----~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      |.+++|+++||||+|+||++++++|+++|++|++++|......+    ..+.....+.++.++.+|++|++++.++++. 
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~-   79 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS-   79 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh-
Confidence            45778999999999999999999999999999999875432222    2221111234678899999999999888764 


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC---------
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI---------  160 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~---------  160 (266)
                           ..+|++||+|+.....    .+.+++++.+++|+.++.++++++    ++.+.+++|++||...+.         
T Consensus        80 -----~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E  146 (352)
T PLN02240         80 -----TRFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTE  146 (352)
T ss_pred             -----CCCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCC
Confidence                 2589999999965322    133457788999999999998765    444456999999964332         


Q ss_pred             --CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCC----C---CccchhHHHHHHHHh-cC-----
Q 024551          161 --SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP----P---DLNDLLVQEYVKLIA-KT-----  225 (266)
Q Consensus       161 --~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~----~---~~~~~~~~~~~~~~~-~~-----  225 (266)
                        +..+...|+.+|.+.+.+++.++.+  ..++++..+.|+.+..+...    +   ............... ..     
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PLN02240        147 EFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTV  224 (352)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEE
Confidence              1123568999999999999988755  23567777776544332110    0   011111111111111 11     


Q ss_pred             -----------CCCCCCCccchHHHHHHHhcCC--CCCccccEEEeCCCcc
Q 024551          226 -----------PLARSAEPNEISPLVAFLCLPA--ASYITGQVISIDGGYT  263 (266)
Q Consensus       226 -----------~~~~~~~~~eia~~~~~l~s~~--~~~~~G~~l~vdgG~~  263 (266)
                                 ..+.+..++|++++++.++...  .....|+.+++.+|..
T Consensus       225 ~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~  275 (352)
T PLN02240        225 FGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKG  275 (352)
T ss_pred             eCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCc
Confidence                       1123466899999988776321  1224567888877754

>PLN02686 cinnamoyl-CoA reductase

Probab=99.80  E-value=1.3e-17  Score=147.64  Aligned_cols=213  Identities=15%  Similarity=0.063  Sum_probs=146.0

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc------CCeeEEEeccCCCHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK------GFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      ..+.++|++|||||+|+||++++++|+++|++|+++.|+.+..+.+. ++...      ...+.++.+|++|.+++.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            45678999999999999999999999999999999888876655542 33211      135788999999999988877


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCC--C----
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAG--A----  159 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~--~----  159 (266)
                      +        .+|.+||.++.........    ......++|+.++..+++++.    +. +-.++|++||..+  +    
T Consensus       127 ~--------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~----~~~~v~r~V~~SS~~~~vyg~~~  190 (367)
T PLN02686        127 D--------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACV----RTESVRKCVFTSSLLACVWRQNY  190 (367)
T ss_pred             H--------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHH----hcCCccEEEEeccHHHhcccccC
Confidence            6        2688889888654322111    112446778889888888763    32 3458999999631  1    


Q ss_pred             -CC----------------CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHH
Q 024551          160 -IS----------------IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLI  222 (266)
Q Consensus       160 -~~----------------~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~  222 (266)
                       ..                ..+...|+.||.+.+.+++.++.+   +|++++.++|+.+.+|..................
T Consensus       191 ~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~  267 (367)
T PLN02686        191 PHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATIAYLKGAQ  267 (367)
T ss_pred             CCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHHHHhcCCC
Confidence             00                002246999999999999988765   5899999999999998643221111111100000


Q ss_pred             hcCC--CCCCCCccchHHHHHHHhc
Q 024551          223 AKTP--LARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       223 ~~~~--~~~~~~~~eia~~~~~l~s  245 (266)
                      ....  ...+...+|++++++.++.
T Consensus       268 ~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        268 EMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             ccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            0001  1136778999999988874

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.80  E-value=1.8e-17  Score=139.25  Aligned_cols=202  Identities=15%  Similarity=0.115  Sum_probs=134.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH-HHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG-DQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~   92 (266)
                      -..++|+++||||+|+||++++++|+++|++|+++.|+.+..++...    .+.++.++++|++|. +++.+   .+   
T Consensus        13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~~---~~---   82 (251)
T PLN00141         13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLVE---AI---   82 (251)
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHHH---Hh---
Confidence            34567999999999999999999999999999999999876543321    134688899999984 33222   22   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC---CCCCchhhh
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI---SIPRLSAYA  169 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~---~~~~~~~y~  169 (266)
                       ...+|++|+++|.......        ...+++|+.++.++++++    ++.+.++||++||...+.   +.+....|.
T Consensus        83 -~~~~d~vi~~~g~~~~~~~--------~~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~  149 (251)
T PLN00141         83 -GDDSDAVICATGFRRSFDP--------FAPWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYI  149 (251)
T ss_pred             -hcCCCEEEECCCCCcCCCC--------CCceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchh
Confidence             1258999999986421111        112578888988888876    455567999999986432   222334566


Q ss_pred             hhHHHHHHHHHHHHHH--hccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          170 ASKGAINQLTKNLACE--WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       170 ~sK~al~~~~~~~a~e--l~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      ..|.....+...+..|  +...|++++.|.||++.++.........        ....+.....+++|+|+.++.++..
T Consensus       150 ~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~--------~~~~~~~~~i~~~dvA~~~~~~~~~  220 (251)
T PLN00141        150 FLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVME--------PEDTLYEGSISRDQVAEVAVEALLC  220 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEEC--------CCCccccCcccHHHHHHHHHHHhcC
Confidence            6665444333333333  4667899999999999876432211100        0001122457899999999999864

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.79  E-value=2e-17  Score=145.16  Aligned_cols=225  Identities=18%  Similarity=0.080  Sum_probs=145.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-----HHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-----INERIQEWES-KGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-----~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |++|||||+|.||++++++|+++|++|++++|+.+.     ++.+.+.+.. .+.++.++++|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999987542     2222211111 1346889999999999998888853   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------C
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------S  161 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~  161 (266)
                         ++|++||+|+......    ..+.-...+++|+.++.++++++.+.=.+ +..++|++||...+.           +
T Consensus        78 ---~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~  149 (343)
T TIGR01472        78 ---KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETTP  149 (343)
T ss_pred             ---CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCCC
Confidence               4899999999754321    11223456788999999999988653111 123899999964332           1


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccC---CcEEEEEecCcccCCCCCCCccchhHHHHHHHHh----------cCCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATD---SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA----------KTPLA  228 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~---gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~----------~~~~~  228 (266)
                      ..+...|+.||.+.+.+++.++.+++-.   ++.++...|+.-.. +    ..........+...          ....+
T Consensus       150 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  224 (343)
T TIGR01472       150 FYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGEN-F----VTRKITRAAAKIKLGLQEKLYLGNLDAKR  224 (343)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc-c----cchHHHHHHHHHHcCCCCceeeCCCcccc
Confidence            1245689999999999999998775321   12223344432110 0    11111111111111          12335


Q ss_pred             CCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          229 RSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      .+...+|++++++.++....    +..+++-+|..
T Consensus       225 d~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~  255 (343)
T TIGR01472       225 DWGHAKDYVEAMWLMLQQDK----PDDYVIATGET  255 (343)
T ss_pred             CceeHHHHHHHHHHHHhcCC----CccEEecCCCc
Confidence            67889999999988875321    24577766643

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.79  E-value=2.6e-17  Score=147.01  Aligned_cols=233  Identities=21%  Similarity=0.161  Sum_probs=180.1

Q ss_pred             CCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHH
Q 024551            6 EPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQR   82 (266)
Q Consensus         6 ~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i   82 (266)
                      +|-+..-.-.++||+++||||+|.||+++++++++.+.+ +++.+|++-++-++..++++.  ..+..++-+|+.|.+.+
T Consensus       238 ~~d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~  317 (588)
T COG1086         238 ALDTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRV  317 (588)
T ss_pred             CCCHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHH
Confidence            344444445689999999999999999999999999855 889999999999999999875  46888999999999999


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI  162 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~  162 (266)
                      +.+++.      .++|+++|.|..-+.-..+.    ...+.+.+|+.|+.++++++    .+.+-.++|++|+--+..| 
T Consensus       318 ~~~~~~------~kvd~VfHAAA~KHVPl~E~----nP~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKAV~P-  382 (588)
T COG1086         318 ERAMEG------HKVDIVFHAAALKHVPLVEY----NPEEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKAVNP-  382 (588)
T ss_pred             HHHHhc------CCCceEEEhhhhccCcchhc----CHHHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcccCC-
Confidence            998883      47999999999765433333    34556999999999999998    4566679999999776654 


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC--------CCCCCcc
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL--------ARSAEPN  234 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~  234 (266)
                        ...|++||..-+.++++++......+-++.++.-|.|-...-.-   -+.+.  .++....|+        +.+-+.+
T Consensus       383 --tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSV---iPlFk--~QI~~GgplTvTdp~mtRyfMTI~  455 (588)
T COG1086         383 --TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSV---IPLFK--KQIAEGGPLTVTDPDMTRFFMTIP  455 (588)
T ss_pred             --chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCC---HHHHH--HHHHcCCCccccCCCceeEEEEHH
Confidence              58999999999999999998777667899999999887643221   11111  233333332        4456778


Q ss_pred             chHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          235 EISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       235 eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      |.++.++......   -.|+++.+|-|-.
T Consensus       456 EAv~LVlqA~a~~---~gGeifvldMGep  481 (588)
T COG1086         456 EAVQLVLQAGAIA---KGGEIFVLDMGEP  481 (588)
T ss_pred             HHHHHHHHHHhhc---CCCcEEEEcCCCC
Confidence            8888888776432   4688888887743

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.78  E-value=4.3e-17  Score=143.37  Aligned_cols=232  Identities=15%  Similarity=0.113  Sum_probs=157.3

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-----cCCeeEEEeccCCCHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-----KGFKVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~~~i~~~~~   87 (266)
                      +..+++|+++||||+|-||++++++|.++|++|++++|...........+..     ...++.++.+|+.|.+++.++++
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            3557889999999999999999999999999999998865432222222211     11357889999999888776664


Q ss_pred             HHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----
Q 024551           88 TVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----  162 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----  162 (266)
                              .+|+|||.|+......    ..++....+++|+.++.++++.+    ++.+..++|++||...+...     
T Consensus        90 --------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         90 --------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             --------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeechHhhCCCCCCCC
Confidence                    3799999999653211    11223457999999999998877    44455699999987544211     


Q ss_pred             ------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc-cchhHHH-HHHHHhcCC--------
Q 024551          163 ------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL-NDLLVQE-YVKLIAKTP--------  226 (266)
Q Consensus       163 ------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~-~~~~~~~-~~~~~~~~~--------  226 (266)
                            .+...|+.+|.+.+.+++.++.+   +|+++..+.|+.+..|...+.. ....... ..+.....+        
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~  230 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGS  230 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCC
Confidence                  13457999999999999887655   4799999999999887543211 0011111 112221111        


Q ss_pred             -CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          227 -LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       227 -~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                       .+.+...+|++++++.++........|..+++-+|..
T Consensus       231 ~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~  268 (348)
T PRK15181        231 TSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDR  268 (348)
T ss_pred             ceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCc
Confidence             1345678999999887664322223578888877654

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.78  E-value=2.7e-17  Score=142.17  Aligned_cols=222  Identities=18%  Similarity=0.133  Sum_probs=151.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CeEEEecCChh-HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           20 TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQN-MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +++||||+|+||++++++|+++|  ++|++.+|... .-.+..+.+.. ..++.++.+|++|++++.++++..      +
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~------~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH------Q   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc------C
Confidence            48999999999999999999987  78888876321 11111122221 236788899999999998887642      5


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC------------CCC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS------------IPR  164 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~------------~~~  164 (266)
                      +|+|||+|+.....    .+.+.++..+++|+.++.++++++.+.+.   ..++|++||...+..            ..+
T Consensus        74 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        74 PDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             CCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            89999999975432    23445677899999999999887754321   348999998543221            123


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC---------CCCCCccc
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL---------ARSAEPNE  235 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~e  235 (266)
                      ...|+.+|.+.+.+++.++.+   .++++..+.|+.+..+.....  .-......+.....+.         ..+..++|
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  221 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPE--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVED  221 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcc--cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHH
Confidence            457999999999999988766   468999999998887653321  1111111222222111         13456799


Q ss_pred             hHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          236 ISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       236 ia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +++++..++...   ..|+.+++.++..
T Consensus       222 ~a~~~~~~~~~~---~~~~~~~~~~~~~  246 (317)
T TIGR01181       222 HCRAIYLVLEKG---RVGETYNIGGGNE  246 (317)
T ss_pred             HHHHHHHHHcCC---CCCceEEeCCCCc
Confidence            999999888542   3577888876654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.78  E-value=5.9e-17  Score=141.72  Aligned_cols=228  Identities=15%  Similarity=0.125  Sum_probs=149.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +++||||+++||++++++|+++|++|++++|...........+.+. +.++.++.+|++|++++.++++.      .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD------HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc------CCCC
Confidence            6899999999999999999999999998876533222222223222 34577889999999998887763      3699


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC------------CCch
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI------------PRLS  166 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~------------~~~~  166 (266)
                      ++||+|+......    ..+...+.+++|+.++.++++++    ++.+.+++|++||...+...            .+..
T Consensus        76 ~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~  147 (338)
T PRK10675         76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQS  147 (338)
T ss_pred             EEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCC
Confidence            9999999754321    22334567899999999997765    45555789999997543211            2357


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCC----CCC---ccchhHHHHHHHHh-cC----------C--
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQIS----PPD---LNDLLVQEYVKLIA-KT----------P--  226 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~----~~~---~~~~~~~~~~~~~~-~~----------~--  226 (266)
                      .|+.+|.+.+.+++.++.+..  ++++..+.|+.+..+..    .+.   ..........+... ..          +  
T Consensus       148 ~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (338)
T PRK10675        148 PYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCC
Confidence            899999999999999876532  46666666655444321    110   01111111122211 10          1  


Q ss_pred             ----CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          227 ----LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       227 ----~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                          .+.+...+|+|++++.++........|+.+++.+|..
T Consensus       226 ~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~  266 (338)
T PRK10675        226 DGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_pred             CCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCc
Confidence                1245778999999887774321223357888877653

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.76  E-value=9.9e-17  Score=141.17  Aligned_cols=224  Identities=15%  Similarity=0.144  Sum_probs=150.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~-v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++|||||+|+||++++++|+++|++ |+.+++..  ...+... .+. .+.++.++.+|++|.+++++++++      ..
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~   73 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQ------HQ   73 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHh------cC
Confidence            6899999999999999999999977 55555432  1122211 111 124577889999999999888874      25


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-----CCCeEEEEecCCCCCC----------
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-----GNASIVFMSSVAGAIS----------  161 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----~~g~iv~vss~~~~~~----------  161 (266)
                      +|++||+|+......    +.+..++.+++|+.++.++++++.++|...     +..++|++||...+..          
T Consensus        74 ~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         74 PDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             CCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            999999999653211    123346789999999999999998776421     2348999999643321          


Q ss_pred             -----------CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC--C--
Q 024551          162 -----------IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT--P--  226 (266)
Q Consensus       162 -----------~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~--  226 (266)
                                 ..+...|+.||.+.+.+++.++.++   |+.+..+.|+.+..+.....  ..............  +  
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~--~~~~~~~~~~~~~~~~~~~  224 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIY  224 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCcc--chHHHHHHHHhcCCCeEEe
Confidence                       1234689999999999999987764   56677777777766542111  10111111111111  1  


Q ss_pred             -----CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          227 -----LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       227 -----~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                           .+.+..++|++.++..++...   ..|+.+++-++..
T Consensus       225 ~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~  263 (352)
T PRK10084        225 GKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNE  263 (352)
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCc
Confidence                 234677899999998887532   2477788876643

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.75  E-value=2.2e-16  Score=137.06  Aligned_cols=227  Identities=18%  Similarity=0.147  Sum_probs=151.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +++||||+|.||++++++|.++|++|++++|......+....+.+. .++..+.+|++++++++++++.      .++|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~------~~~d~   73 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE------HKIDA   73 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh------CCCcE
Confidence            4789999999999999999999999998876433222222222222 2577889999999999888763      46999


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------CCchhh
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------PRLSAY  168 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~y  168 (266)
                      +||+||......    ..++..+.++.|+.++..+++++    .+.+.+++|++||...+...           .+...|
T Consensus        74 vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        74 VIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             EEECccccCcch----hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            999999754322    23345567899999999998875    44445699999886543211           134679


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc------cchhHHHHHHHHh--c---------CCC----
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL------NDLLVQEYVKLIA--K---------TPL----  227 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~--~---------~~~----  227 (266)
                      +.+|++.+.+++.++.+  ..++++..+.|+.+..+......      .............  .         .|.    
T Consensus       146 ~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKA--DPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHh--ccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            99999999999998765  24689999999887765322110      0111111111111  0         011    


Q ss_pred             --CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          228 --ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       228 --~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                        +.+...+|++++++.++........|+.+++.++..
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~  261 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQG  261 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCc
Confidence              235678999999998885322223567788866644

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.75  E-value=2.7e-16  Score=138.48  Aligned_cols=225  Identities=20%  Similarity=0.185  Sum_probs=148.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhH---HHHHHHHHHhcC--------CeeEEEeccCCCHHH-H-HH
Q 024551           20 TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNM---INERIQEWESKG--------FKVTGSVCDLSFGDQ-R-EK   84 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~---~~~~~~~l~~~~--------~~~~~~~~D~~~~~~-i-~~   84 (266)
                      +++||||||+||++++++|+++|  ++|+++.|+.+.   .+.+.+.+....        .++.++.+|++++.- + ..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  779999997652   223333332211        478899999987531 0 11


Q ss_pred             HHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-
Q 024551           85 LIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-  163 (266)
Q Consensus        85 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-  163 (266)
                      ....+.    ..+|++||||+.....       ..++..+++|+.++..+++.+.    +.+..+++++||........ 
T Consensus        81 ~~~~~~----~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~----~~~~~~~v~iSS~~v~~~~~~  145 (367)
T TIGR01746        81 EWERLA----ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAA----SGRAKPLHYVSTISVLAAIDL  145 (367)
T ss_pred             HHHHHH----hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHh----hCCCceEEEEccccccCCcCC
Confidence            112221    3589999999965321       2256678899999999988763    34445699999987654311 


Q ss_pred             ---------------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-chhHHHH-HHH--Hhc
Q 024551          164 ---------------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-DLLVQEY-VKL--IAK  224 (266)
Q Consensus       164 ---------------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~-~~~--~~~  224 (266)
                                     ....|+.+|.+.+.+++.++.    .|++++.+.||.+.++....... ....... ...  ...
T Consensus       146 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~  221 (367)
T TIGR01746       146 STVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA  221 (367)
T ss_pred             CCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC
Confidence                           134799999999999876543    38999999999998753222111 1111111 110  111


Q ss_pred             CCC-----CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          225 TPL-----ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       225 ~~~-----~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      .|.     ..+...+|+++++++++.....+.+|+.+++.++..
T Consensus       222 ~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~  265 (367)
T TIGR01746       222 YPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEP  265 (367)
T ss_pred             CCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCC
Confidence            221     226778999999999986654445588888887643

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.74  E-value=1.9e-16  Score=137.69  Aligned_cols=210  Identities=22%  Similarity=0.160  Sum_probs=147.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++||||+|.||+.++++|+++|++|++++|+++.....    .  ...+.++.+|++|.+++.++++        .+|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~--------~~d   66 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA--------GCR   66 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh--------CCC
Confidence            4799999999999999999999999999999987643221    1  2357789999999998877664        479


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC---------------
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP---------------  163 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~---------------  163 (266)
                      ++||+++....      ..++++..+++|+.++.++++++.    +.+.+++|++||...+...+               
T Consensus        67 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        67 ALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             EEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            99999985421      112356778999999999988874    34456999999976543211               


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-hhHHHHHHHHhcCC-----CCCCCCccchH
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-LLVQEYVKLIAKTP-----LARSAEPNEIS  237 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~eia  237 (266)
                      ....|+.+|.+.+.+++.++.+   .|+++..+.|+.+..+........ ....  .......+     ...+..++|++
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a  211 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIV--DFLNGKMPAYVDTGLNLVHVDDVA  211 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHH--HHHcCCCceeeCCCcceEEHHHHH
Confidence            1347999999999999988665   478999999998876543221111 1111  11111111     12356789999


Q ss_pred             HHHHHHhcCCCCCccccEEEeCC
Q 024551          238 PLVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      ++++.++...   ..|+.+.+.|
T Consensus       212 ~a~~~~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       212 EGHLLALERG---RIGERYILGG  231 (328)
T ss_pred             HHHHHHHhCC---CCCceEEecC
Confidence            9988877542   3577777753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.73  E-value=5.6e-16  Score=138.17  Aligned_cols=225  Identities=13%  Similarity=0.121  Sum_probs=149.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHH-hcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWE-SKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++.++||||||+|.||+.++++|.++ |++|++++|+.+..+.+..... ....++.++.+|++|.+.+.++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            34568999999999999999999998 5999999987655433221100 012368899999999988877664      


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC---------C-
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI---------P-  163 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~---------~-  163 (266)
                        .+|+|||+|+......... .   -.+.+..|+.++.++++++.    +.+ .++|++||...+...         | 
T Consensus        86 --~~d~ViHlAa~~~~~~~~~-~---~~~~~~~n~~gt~~ll~aa~----~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~  154 (386)
T PLN02427         86 --MADLTINLAAICTPADYNT-R---PLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDHPL  154 (386)
T ss_pred             --cCCEEEEcccccChhhhhh-C---hHHHHHHHHHHHHHHHHHHH----hcC-CEEEEEeeeeeeCCCcCCCCCccccc
Confidence              2799999999754322211 1   12345679999999888763    333 599999996533210         0 


Q ss_pred             -----------------------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC--------ccc
Q 024551          164 -----------------------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD--------LND  212 (266)
Q Consensus       164 -----------------------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~--------~~~  212 (266)
                                             ....|+.+|.+.+.+++.++..   .|+.+..+.|+.+..+.....        ...
T Consensus       155 ~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~  231 (386)
T PLN02427        155 RQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP  231 (386)
T ss_pred             ccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccccc
Confidence                                   1136999999999999876543   579999999999988753210        001


Q ss_pred             hhHHHH-HHHHhcCC---------CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCC
Q 024551          213 LLVQEY-VKLIAKTP---------LARSAEPNEISPLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       213 ~~~~~~-~~~~~~~~---------~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      .....+ .......+         .+.+...+|++++++.++... ....|..+++.+|
T Consensus       232 ~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~  289 (386)
T PLN02427        232 RVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNP  289 (386)
T ss_pred             hHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCC
Confidence            111111 12222222         124678999999999888532 1235778888765

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=1e-15  Score=126.56  Aligned_cols=222  Identities=16%  Similarity=0.121  Sum_probs=155.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC--eEEEecCC--hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA--SVHTCGRD--QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~--~v~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++|||||.|.||.+.++.+.++.-  +|+.++.-  ....+.+....  ...+..|++.|+.|.+.+.+++.+      
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~--~~~~~~fv~~DI~D~~~v~~~~~~------   72 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE--DSPRYRFVQGDICDRELVDRLFKE------   72 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh--cCCCceEEeccccCHHHHHHHHHh------
Confidence            5789999999999999999998764  35665542  12222222222  135899999999999999888874      


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-------------CC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-------------IS  161 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-------------~~  161 (266)
                      .++|+++|.|.-++..+    +.++-+..+++|+.|++.+++++..+..+   -|++.||.-.-+             .+
T Consensus        73 ~~~D~VvhfAAESHVDR----SI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp  145 (340)
T COG1088          73 YQPDAVVHFAAESHVDR----SIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTP  145 (340)
T ss_pred             cCCCeEEEechhccccc----cccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCC
Confidence            36999999999776433    44556678999999999999998654422   489999884432             24


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHH-HHHHHHhc---------CCCCCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ-EYVKLIAK---------TPLARSA  231 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~  231 (266)
                      ..+..+|++|||+-+.|+|++...   +|+.+....+..--.|..-   ++.... ...+....         ...+.+.
T Consensus       146 ~~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqf---pEKlIP~~I~nal~g~~lpvYGdG~~iRDWl  219 (340)
T COG1088         146 YNPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQF---PEKLIPLMIINALLGKPLPVYGDGLQIRDWL  219 (340)
T ss_pred             CCCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcC---chhhhHHHHHHHHcCCCCceecCCcceeeeE
Confidence            446789999999999999999888   4566666665444433221   111111 11122222         2236788


Q ss_pred             CccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          232 EPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       232 ~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ..+|-++++..++....   -|+++++.||.-.
T Consensus       220 ~VeDh~~ai~~Vl~kg~---~GE~YNIgg~~E~  249 (340)
T COG1088         220 YVEDHCRAIDLVLTKGK---IGETYNIGGGNER  249 (340)
T ss_pred             EeHhHHHHHHHHHhcCc---CCceEEeCCCccc
Confidence            99999999999986532   3999999998643

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.71  E-value=1.5e-16  Score=133.73  Aligned_cols=218  Identities=22%  Similarity=0.203  Sum_probs=150.6

Q ss_pred             EEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhc--CCee----EEEeccCCCHHHHHHHHHHHHhhc
Q 024551           21 ALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESK--GFKV----TGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~--~~~~----~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ||||||+|.||++++++|++.+ .++++++|++..+-++..++.+.  ..++    ..+.+|++|.+.+++++++     
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence            6999999999999999999998 56999999999999999998643  2223    3457899999999888874     


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       .++|+++|.|+.-+....+..    ..+.+++|+.|+.++++++.    +.+-.++|++|+--+..   +...|++||.
T Consensus        76 -~~pdiVfHaAA~KhVpl~E~~----p~eav~tNv~GT~nv~~aa~----~~~v~~~v~ISTDKAv~---PtnvmGatKr  143 (293)
T PF02719_consen   76 -YKPDIVFHAAALKHVPLMEDN----PFEAVKTNVLGTQNVAEAAI----EHGVERFVFISTDKAVN---PTNVMGATKR  143 (293)
T ss_dssp             --T-SEEEE------HHHHCCC----HHHHHHHHCHHHHHHHHHHH----HTT-SEEEEEEECGCSS-----SHHHHHHH
T ss_pred             -cCCCEEEEChhcCCCChHHhC----HHHHHHHHHHHHHHHHHHHH----HcCCCEEEEccccccCC---CCcHHHHHHH
Confidence             369999999998765444443    34569999999999999984    45567999999987655   3589999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC--------CCCCCccchHHHHHHHhc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL--------ARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~eia~~~~~l~s  245 (266)
                      ..+.++.+++......+.++.+|.-|.|....-.-   -+.  ...++....|+        |.+.+++|.++.++..+.
T Consensus       144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSV---ip~--F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~  218 (293)
T PF02719_consen  144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSV---IPL--FKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAA  218 (293)
T ss_dssp             HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSC---HHH--HHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcH---HHH--HHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHh
Confidence            99999999988876777899999999887532111   111  11344444443        456788999999887764


Q ss_pred             CCCCCccccEEEeCCCcc
Q 024551          246 PAASYITGQVISIDGGYT  263 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~  263 (266)
                      -.   ..|+++..|-|..
T Consensus       219 ~~---~~geifvl~mg~~  233 (293)
T PF02719_consen  219 LA---KGGEIFVLDMGEP  233 (293)
T ss_dssp             H-----TTEEEEE---TC
T ss_pred             hC---CCCcEEEecCCCC
Confidence            32   3588888887754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.71  E-value=1e-15  Score=126.85  Aligned_cols=214  Identities=23%  Similarity=0.297  Sum_probs=154.6

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNIL  100 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~l  100 (266)
                      ||||||+|-||.+++++|.++|+.|+.+.|+...........     ++.++.+|+.|.++++++++..      .+|.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~------~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA------NIDVV   69 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc------CceEE
Confidence            699999999999999999999999887777766443322222     7889999999999999999865      58999


Q ss_pred             EeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------CCchhhh
Q 024551          101 VNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------PRLSAYA  169 (266)
Q Consensus       101 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~y~  169 (266)
                      ||+|+....    ....+.....++.|+.++..+++.+    ++.+..++|++||...+...           .+...|+
T Consensus        70 i~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~  141 (236)
T PF01370_consen   70 IHLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG  141 (236)
T ss_dssp             EEEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred             EEeeccccc----ccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence            999997531    1123456778888988888887777    45545799999996543322           1345799


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-HHHHHHHHhcCC---------CCCCCCccchHHH
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-VQEYVKLIAKTP---------LARSAEPNEISPL  239 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~eia~~  239 (266)
                      .+|...+.+.+.+..+.   ++++..+.|+.+-.+.......... ...........+         .+.+...+|++++
T Consensus       142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  218 (236)
T PF01370_consen  142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEA  218 (236)
T ss_dssp             HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHH
T ss_pred             ccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHH
Confidence            99999999999987764   7999999999998887111111111 112222222221         1234667999999


Q ss_pred             HHHHhcCCCCCccccEEEe
Q 024551          240 VAFLCLPAASYITGQVISI  258 (266)
Q Consensus       240 ~~~l~s~~~~~~~G~~l~v  258 (266)
                      +++++....  ..|+.+++
T Consensus       219 ~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  219 IVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHhCCC--CCCCEEEe
Confidence            999996443  56777765

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.70  E-value=7.6e-16  Score=131.21  Aligned_cols=220  Identities=20%  Similarity=0.170  Sum_probs=153.2

Q ss_pred             EEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           22 LVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        22 lItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      |||||+|.||++++++|.++|  ++|.++++.+....  ...+... ....++.+|++|++++.++++       + .|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g-~d~   69 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-GVKEYIQGDITDPESLEEALE-------G-VDV   69 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-cceeEEEeccccHHHHHHHhc-------C-Cce
Confidence            699999999999999999999  78888888765322  1122221 233388999999999999887       3 799


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC---C--------------
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS---I--------------  162 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~---~--------------  162 (266)
                      +||+|+......     ....++.+++|+.|+-++++++.    +.+-.++|++||.++...   .              
T Consensus        70 V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~----~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~  140 (280)
T PF01073_consen   70 VFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAAR----KAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS  140 (280)
T ss_pred             EEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence            999999754322     23467799999999999998884    455679999999987553   1              


Q ss_pred             CCchhhhhhHHHHHHHHHHHHH-Hhc-cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHH-hcC------CCCCCCCc
Q 024551          163 PRLSAYAASKGAINQLTKNLAC-EWA-TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLI-AKT------PLARSAEP  233 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~-el~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~  233 (266)
                      .....|+.||+.-|.++..... ++. ...++..+|+|..|..|.-....+.. ... .... ...      -...+..+
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~-~~~-~~~g~~~~~~g~~~~~~~~vyV  218 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRL-VKM-VRSGLFLFQIGDGNNLFDFVYV  218 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchh-hHH-HHhcccceeecCCCceECcEeH
Confidence            1334899999999999987654 122 12489999999999887533322211 110 1111 001      11235668


Q ss_pred             cchHHHHHHHhc---CC--CCCccccEEEeCCCcc
Q 024551          234 NEISPLVAFLCL---PA--ASYITGQVISIDGGYT  263 (266)
Q Consensus       234 ~eia~~~~~l~s---~~--~~~~~G~~l~vdgG~~  263 (266)
                      +++|.+++..+.   +.  .....||.+.+..|.-
T Consensus       219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p  253 (280)
T PF01073_consen  219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEP  253 (280)
T ss_pred             HHHHHHHHHHHHHhccccccccCCCcEEEEECCCc
Confidence            999998865432   22  4668999998877653

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.69  E-value=7.9e-16  Score=137.15  Aligned_cols=209  Identities=17%  Similarity=0.185  Sum_probs=143.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHH--HHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE--RIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++++||||+|.||++++++|.++|++|++++|+.+..+.  ..+++.....++.++.+|++|+++++++++..    
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~----  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE----  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh----
Confidence            568899999999999999999999999999999998765421  11222222346889999999999999988754    


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +.++|+||||++.....     .    .+.+++|+.++.++++++    ++.+.+++|++||.....   +...|..+|.
T Consensus       134 ~~~~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~---p~~~~~~sK~  197 (390)
T PLN02657        134 GDPVDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQK---PLLEFQRAKL  197 (390)
T ss_pred             CCCCcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccC---cchHHHHHHH
Confidence            12699999999853211     1    123567888887777765    455567999999986543   3456888898


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC--------CCC--CCCccchHHHHHHH
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP--------LAR--SAEPNEISPLVAFL  243 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~eia~~~~~l  243 (266)
                      ..+...+.     ...+++...+.|+.+..++..      .   ........+        ..+  ....+|+|..+..+
T Consensus       198 ~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~------~---~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~  263 (390)
T PLN02657        198 KFEAELQA-----LDSDFTYSIVRPTAFFKSLGG------Q---VEIVKDGGPYVMFGDGKLCACKPISEADLASFIADC  263 (390)
T ss_pred             HHHHHHHh-----ccCCCCEEEEccHHHhcccHH------H---HHhhccCCceEEecCCcccccCceeHHHHHHHHHHH
Confidence            88877654     236899999999876532211      0   011111111        112  36678999998888


Q ss_pred             hcCCCCCccccEEEeCC
Q 024551          244 CLPAASYITGQVISIDG  260 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdg  260 (266)
                      +.+..  ..|+.+++.|
T Consensus       264 ~~~~~--~~~~~~~Igg  278 (390)
T PLN02657        264 VLDES--KINKVLPIGG  278 (390)
T ss_pred             HhCcc--ccCCEEEcCC
Confidence            75422  3578888876

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.68  E-value=1e-14  Score=128.19  Aligned_cols=218  Identities=12%  Similarity=0.081  Sum_probs=146.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCC-CHHHHHHHHHHHHhhcCCc
Q 024551           19 MTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS-FGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~~~~   96 (266)
                      |+++||||+|.||++++++|.++ |++|++++|+.+......    . ...+.++.+|++ +.+.+.++++        .
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~~--------~   68 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV----N-HPRMHFFEGDITINKEWIEYHVK--------K   68 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc----c-CCCeEEEeCCCCCCHHHHHHHHc--------C
Confidence            57999999999999999999986 699999998765332211    1 235888899998 5665554433        4


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC--------------
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI--------------  162 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~--------------  162 (266)
                      +|+|||+|+...+...    .++-+..+++|+.++.++++++.    +.+ .++|++||...+...              
T Consensus        69 ~d~ViH~aa~~~~~~~----~~~p~~~~~~n~~~~~~ll~aa~----~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~  139 (347)
T PRK11908         69 CDVILPLVAIATPATY----VKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY  139 (347)
T ss_pred             CCEEEECcccCChHHh----hcCcHHHHHHHHHHHHHHHHHHH----hcC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence            8999999997543221    12234668999999999888774    343 599999997543210              


Q ss_pred             ----CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc-----cchhH-HHHHHHHhcC-------
Q 024551          163 ----PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL-----NDLLV-QEYVKLIAKT-------  225 (266)
Q Consensus       163 ----~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~-----~~~~~-~~~~~~~~~~-------  225 (266)
                          .+...|+.+|.+.+.+++.++..   .|+.+..+.|+.+..+......     ..... ..........       
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  216 (347)
T PRK11908        140 GPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDG  216 (347)
T ss_pred             CcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecC
Confidence                11236999999999999987654   5788888999887766432210     01111 1111211111       


Q ss_pred             --CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCC
Q 024551          226 --PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       226 --~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                        ..+.+...+|++++++.++........|+.+++.++
T Consensus       217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence              233578899999999988864322345888888764

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.68  E-value=5.7e-15  Score=130.90  Aligned_cols=220  Identities=15%  Similarity=0.062  Sum_probs=146.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      -++|+++||||+|.||++++++|.++|++|++++|.....      +........++.+|++|.+++..++.        
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~--------   84 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSEDMFCHEFHLVDLRVMENCLKVTK--------   84 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccccccceEEECCCCCHHHHHHHHh--------
Confidence            3789999999999999999999999999999999864321      11111124677899999887666553        


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC---------------
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI---------------  160 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~---------------  160 (266)
                      .+|+|||+|+.........   .+....+..|+.++.++++++    ++.+..++|++||...+.               
T Consensus        85 ~~D~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~  157 (370)
T PLN02695         85 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYPEFKQLETNVSLKESD  157 (370)
T ss_pred             CCCEEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcCCccccCcCCCcCccc
Confidence            4799999998643221111   112345678999999998876    344456999999964321               


Q ss_pred             --CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc-cchhHHHH-HHHHh-cCC---------
Q 024551          161 --SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL-NDLLVQEY-VKLIA-KTP---------  226 (266)
Q Consensus       161 --~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~-~~~~~~~~-~~~~~-~~~---------  226 (266)
                        +..+...|+.+|.+.+.+++.++..   .|+++..+.|+.+..+...... .......+ ..... ..+         
T Consensus       158 ~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~  234 (370)
T PLN02695        158 AWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQ  234 (370)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCe
Confidence              1223458999999999999987654   4799999999998887432110 00001111 11111 111         


Q ss_pred             CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          227 LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       227 ~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      .+.+...+|++++++.++...    .++.+++-+|..
T Consensus       235 ~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~  267 (370)
T PLN02695        235 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  267 (370)
T ss_pred             EEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCc
Confidence            123577899999999877542    245677766543

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.67  E-value=9.7e-15  Score=138.49  Aligned_cols=222  Identities=15%  Similarity=0.101  Sum_probs=150.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHH-HHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ-REKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~   93 (266)
                      .++|+||||||+|.||++++++|.++ |++|+.++|+.......   + . ..++.++.+|++|..+ ++++++      
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~-~-~~~~~~~~gDl~d~~~~l~~~l~------  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L-G-HPRFHFVEGDISIHSEWIEYHIK------  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c-C-CCceEEEeccccCcHHHHHHHhc------
Confidence            46889999999999999999999986 79999999976533211   1 1 2367888999998665 333332      


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------  162 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------  162 (266)
                        .+|++||+|+........    ++.++.+++|+.++.++++++.    +.+ .++|++||...+...           
T Consensus       382 --~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~----~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~  450 (660)
T PRK08125        382 --KCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCV----KYN-KRIIFPSTSEVYGMCTDKYFDEDTSN  450 (660)
T ss_pred             --CCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHH----hcC-CeEEEEcchhhcCCCCCCCcCccccc
Confidence              489999999976532221    2234568999999999988874    333 589999996533210           


Q ss_pred             ----C---CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc-----cch-hHHHHHHHHhcC----
Q 024551          163 ----P---RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL-----NDL-LVQEYVKLIAKT----  225 (266)
Q Consensus       163 ----~---~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~-----~~~-~~~~~~~~~~~~----  225 (266)
                          |   ....|+.||.+.+.+++.++.+   +|+++..+.|+.+..+......     ... ............    
T Consensus       451 ~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~  527 (660)
T PRK08125        451 LIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL  527 (660)
T ss_pred             cccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEE
Confidence                1   1236999999999999988666   4789999999988876532210     011 111111111111    


Q ss_pred             -----CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          226 -----PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       226 -----~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                           ..+.+...+|++++++.++........|+.+++.+|.
T Consensus       528 ~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        528 VDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             eCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence                 1234678999999998888543223468888887763

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.65  E-value=1.3e-14  Score=138.09  Aligned_cols=222  Identities=13%  Similarity=0.111  Sum_probs=150.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHC--CCeEEEecCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARF--GASVHTCGRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~--G~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +++|++|||||+|.||++++++|.++  |++|+.++|..  +....+...  ....++.++.+|++|.+.+..++..   
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~---   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT---   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh---
Confidence            57899999999999999999999998  68898888743  222211110  1134688999999999887665432   


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCC---------
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAIS---------  161 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~---------  161 (266)
                         ..+|+|||+|+......    ..++..+.+++|+.++..+++++    ++.+ ..++|++||...+..         
T Consensus        79 ---~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~~vyg~~~~~~~~~~  147 (668)
T PLN02260         79 ---EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDADVGN  147 (668)
T ss_pred             ---cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcchHHhCCCccccccCc
Confidence               35999999999754321    12223467899999999998876    3333 469999999653321         


Q ss_pred             -----CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHH-HHHHhcCC---------
Q 024551          162 -----IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEY-VKLIAKTP---------  226 (266)
Q Consensus       162 -----~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~---------  226 (266)
                           ..+...|+.+|.+.+.+++.+..+   .++.+..+.|+.+..+.....   .....+ .......+         
T Consensus       148 ~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~---~~i~~~~~~a~~g~~i~i~g~g~~  221 (668)
T PLN02260        148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE---KLIPKFILLAMQGKPLPIHGDGSN  221 (668)
T ss_pred             cccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcc---cHHHHHHHHHhCCCCeEEecCCCc
Confidence                 113457999999999999987665   478899999998887643221   111111 11111111         


Q ss_pred             CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          227 LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       227 ~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      .+.+...+|+++++..++...   ..|..+++.++.
T Consensus       222 ~r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~  254 (668)
T PLN02260        222 VRSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKK  254 (668)
T ss_pred             eEeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCC
Confidence            123567899999998887432   246778887654

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.64  E-value=2.5e-14  Score=123.61  Aligned_cols=214  Identities=14%  Similarity=0.142  Sum_probs=138.7

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh--hcCCccc
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS--VFDGKLN   98 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~~~~id   98 (266)
                      ++||||+|.||++++++|+++|++++++.|+........          ....+|+.|..+.+.+++.+.+  .+ +++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV----------NLVDLDIADYMDKEDFLAQIMAGDDF-GDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH----------hhhhhhhhhhhhHHHHHHHHhccccc-CCcc
Confidence            799999999999999999999997766655543221110          1234577777666666665543  22 4699


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------CCCchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------IPRLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~  167 (266)
                      +|||+|+......   .+.   +..++.|+.++.++++++.    +.+ .++|++||...+..           ..+...
T Consensus        71 ~Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~----~~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~  139 (308)
T PRK11150         71 AIFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCL----ERE-IPFLYASSAATYGGRTDDFIEEREYEKPLNV  139 (308)
T ss_pred             EEEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHH----HcC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence            9999998643221   122   3468999999999988873    444 37999999754321           113457


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC--ccchhHHHHHHHHhc-CC---------CCCCCCccc
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD--LNDLLVQEYVKLIAK-TP---------LARSAEPNE  235 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~-~~---------~~~~~~~~e  235 (266)
                      |+.+|.+.+.+++.++.+   .++.+..+.|+.+..+.....  ............... .+         .+.+...+|
T Consensus       140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D  216 (308)
T PRK11150        140 YGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGD  216 (308)
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHH
Confidence            999999999999887654   478999999998887653321  111111110112111 11         234568899


Q ss_pred             hHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          236 ISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       236 ia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++++++.++...    .+.++++-+|..
T Consensus       217 ~a~a~~~~~~~~----~~~~yni~~~~~  240 (308)
T PRK11150        217 VAAVNLWFWENG----VSGIFNCGTGRA  240 (308)
T ss_pred             HHHHHHHHHhcC----CCCeEEcCCCCc
Confidence            999988887532    245788876654

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.64  E-value=2e-14  Score=124.14  Aligned_cols=214  Identities=25%  Similarity=0.286  Sum_probs=147.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      .+|||||+|.||++++++|.++|++|+.++|.........       ..+.++.+|++|.+.+...+.       +..|.
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~-------~~~d~   67 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK-------GVPDA   67 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh-------cCCCE
Confidence            3999999999999999999999999999999776433222       357788899999855544444       11299


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------CCch--
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------PRLS--  166 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~--  166 (266)
                      +||+|+.........  . .....+++|+.++.++++++.    +.+..++|+.||.+...+.           +...  
T Consensus        68 vih~aa~~~~~~~~~--~-~~~~~~~~nv~gt~~ll~aa~----~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~  140 (314)
T COG0451          68 VIHLAAQSSVPDSNA--S-DPAEFLDVNVDGTLNLLEAAR----AAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLN  140 (314)
T ss_pred             EEEccccCchhhhhh--h-CHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCC
Confidence            999999765322111  1 355689999999999998884    3556799996664433321           1111  


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHH-HHHHHhcCC---C-------CCCCCccc
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQE-YVKLIAKTP---L-------ARSAEPNE  235 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~---~-------~~~~~~~e  235 (266)
                      .|+.+|...+.+++.++.   ..|+.+..+.|+.+..+............. ..+.....+   .       +.+...+|
T Consensus       141 ~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  217 (314)
T COG0451         141 PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDD  217 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHH
Confidence            499999999999999887   567999999999888776555422212211 111222222   1       12566899


Q ss_pred             hHHHHHHHhcCCCCCccccEEEeCCC
Q 024551          236 ISPLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       236 ia~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      ++++++.++......    .+++.++
T Consensus       218 ~a~~~~~~~~~~~~~----~~ni~~~  239 (314)
T COG0451         218 VADALLLALENPDGG----VFNIGSG  239 (314)
T ss_pred             HHHHHHHHHhCCCCc----EEEeCCC
Confidence            999999999644322    6666665

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.62  E-value=1.6e-14  Score=125.50  Aligned_cols=207  Identities=13%  Similarity=0.089  Sum_probs=135.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +++||||||.||++++++|.++|++|.+++|+.+....    +..  ..+.++.+|++|++++.++++        .+|+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~--~~v~~v~~Dl~d~~~l~~al~--------g~d~   67 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE--WGAELVYGDLSLPETLPPSFK--------GVTA   67 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh--cCCEEEECCCCCHHHHHHHHC--------CCCE
Confidence            69999999999999999999999999999998754322    222  257889999999998876665        3799


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHHH
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT  179 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~  179 (266)
                      +||+++....         +.....++|+.++.++.+++    ++.+-.++|++||..+.. . +...|..+|...+.+.
T Consensus        68 Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l  132 (317)
T CHL00194         68 IIDASTSRPS---------DLYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKL  132 (317)
T ss_pred             EEECCCCCCC---------CccchhhhhHHHHHHHHHHH----HHcCCCEEEEeccccccc-c-CCChHHHHHHHHHHHH
Confidence            9998764211         12235667888888887776    455556999999864321 1 2346788888877665


Q ss_pred             HHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeC
Q 024551          180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISID  259 (266)
Q Consensus       180 ~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vd  259 (266)
                      +       ..|+.+..+.|+.+...+........................+...+|+|+++..++....  -.|+.+++-
T Consensus       133 ~-------~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~ni~  203 (317)
T CHL00194        133 K-------KSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNKTFPLV  203 (317)
T ss_pred             H-------HcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCcEEEec
Confidence            4       2578888899985543221110000000000000000111234567999999998885422  258889888


Q ss_pred             CCccC
Q 024551          260 GGYTA  264 (266)
Q Consensus       260 gG~~~  264 (266)
                      |+..+
T Consensus       204 g~~~~  208 (317)
T CHL00194        204 GPKSW  208 (317)
T ss_pred             CCCcc
Confidence            77543

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.62  E-value=6.3e-14  Score=126.65  Aligned_cols=216  Identities=15%  Similarity=0.081  Sum_probs=141.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHH-HHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN-ERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .++|+||||||+|.||++++++|.++|++|++++|...... .....+  ...++.++..|+.++.-             
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~l-------------  181 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPIL-------------  181 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChhh-------------
Confidence            36799999999999999999999999999999887532211 111111  12357778889876521             


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-------------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-------------  161 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-------------  161 (266)
                      ..+|+|||+|+........    ++-++.+++|+.++.++++++.    +.+ .++|++||...+..             
T Consensus       182 ~~~D~ViHlAa~~~~~~~~----~~p~~~~~~Nv~gt~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~  252 (442)
T PLN02206        182 LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQVETYWGN  252 (442)
T ss_pred             cCCCEEEEeeeecchhhhh----cCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECChHHhCCCCCCCCCcccccc
Confidence            2489999999865432211    1235688999999999988873    334 48999999864421             


Q ss_pred             ---CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC---------CCC
Q 024551          162 ---IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP---------LAR  229 (266)
Q Consensus       162 ---~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~  229 (266)
                         ......|+.+|.+.+.+++.+...   .++++..+.|+.+..+........-......+.....+         .+.
T Consensus       253 ~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rd  329 (442)
T PLN02206        253 VNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  329 (442)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEe
Confidence               112357999999999999877554   46888888988777664321111111111112221111         123


Q ss_pred             CCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          230 SAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       230 ~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      +...+|++++++.++...   ..| .+++.+|.
T Consensus       330 fi~V~Dva~ai~~a~e~~---~~g-~yNIgs~~  358 (442)
T PLN02206        330 FQFVSDLVEGLMRLMEGE---HVG-PFNLGNPG  358 (442)
T ss_pred             EEeHHHHHHHHHHHHhcC---CCc-eEEEcCCC
Confidence            577899999998887432   234 67777654

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.62  E-value=5.8e-14  Score=121.43  Aligned_cols=216  Identities=17%  Similarity=0.141  Sum_probs=140.6

Q ss_pred             EEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           21 ALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +|||||+|.||++++++|.++|+ .|++++|..... ... ++   .  ...+..|+++++.++.+.+.   .+ .++|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~---~--~~~~~~d~~~~~~~~~~~~~---~~-~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NL---A--DLVIADYIDKEDFLDRLEKG---AF-GKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hh---h--heeeeccCcchhHHHHHHhh---cc-CCCCE
Confidence            58999999999999999999998 688877654321 111 11   1  12456788887776665553   23 57999


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------CCCchhh
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------IPRLSAY  168 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~y  168 (266)
                      +||+|+....      +.++.+..+++|+.++.++++++.    +.+ .++|++||...+..           ..+...|
T Consensus        70 vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y  138 (314)
T TIGR02197        70 IFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCA----EKG-IPFIYASSAATYGDGEAGFREGRELERPLNVY  138 (314)
T ss_pred             EEECccccCc------cccchHHHHHHHHHHHHHHHHHHH----HhC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence            9999996432      223456788999999999988874    333 48999999754321           1145689


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC--ccchhHHHHHHHHhcCC---------------CCCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD--LNDLLVQEYVKLIAKTP---------------LARSA  231 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~---------------~~~~~  231 (266)
                      +.+|.+.+.+++.+..+. ..++.+..+.|+.+..+.....  ...-............+               .+.+.
T Consensus       139 ~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  217 (314)
T TIGR02197       139 GYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFV  217 (314)
T ss_pred             HHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeE
Confidence            999999999998643331 2246788888887776543211  11111111112211111               12466


Q ss_pred             CccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          232 EPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       232 ~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ..+|++++++.++..    -.+..+++-++..
T Consensus       218 ~v~D~a~~i~~~~~~----~~~~~yni~~~~~  245 (314)
T TIGR02197       218 YVKDVVDVNLWLLEN----GVSGIFNLGTGRA  245 (314)
T ss_pred             EHHHHHHHHHHHHhc----ccCceEEcCCCCC
Confidence            789999999998854    2355788777654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.61  E-value=5e-14  Score=120.41  Aligned_cols=194  Identities=17%  Similarity=0.138  Sum_probs=133.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +++||||+|.||++++++|.++|++|++++|.                     .+|+.++++++++++.      ..+|+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~------~~~d~   53 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRA------IRPDA   53 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHh------CCCCE
Confidence            37999999999999999999999999999884                     4799999998888764      25899


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------CCCchhh
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------IPRLSAY  168 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~y  168 (266)
                      +||+++......    .....+..+++|+.++..+++++.    +.+ .++|++||...+.+           ..+...|
T Consensus        54 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y  124 (287)
T TIGR01214        54 VVNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAA----RHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVY  124 (287)
T ss_pred             EEECCccccccc----cccCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence            999999653211    122356678999999999988873    333 48999999654321           1134689


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC-------CCCCCCccchHHHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP-------LARSAEPNEISPLVA  241 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~eia~~~~  241 (266)
                      +.+|.+.+.+++.+       +.++..+.|+.+..+.....+.....   .......+       ...+...+|+++++.
T Consensus       125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~  194 (287)
T TIGR01214       125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTML---RLAGRGEELRVVDDQIGSPTYAKDLARVIA  194 (287)
T ss_pred             hHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHH---HHhhcCCCceEecCCCcCCcCHHHHHHHHH
Confidence            99999999888765       45789999999887653221111111   11111111       123455799999999


Q ss_pred             HHhcCCCCCccccEEEeCCC
Q 024551          242 FLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG  261 (266)
                      .++... ... +..+++-++
T Consensus       195 ~~~~~~-~~~-~~~~ni~~~  212 (287)
T TIGR01214       195 ALLQRL-ARA-RGVYHLANS  212 (287)
T ss_pred             HHHhhc-cCC-CCeEEEECC
Confidence            888542 123 344555443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.58  E-value=1.8e-13  Score=117.94  Aligned_cols=204  Identities=17%  Similarity=0.153  Sum_probs=136.9

Q ss_pred             EEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEEE
Q 024551           22 LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILV  101 (266)
Q Consensus        22 lItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv  101 (266)
                      |||||+|.||..++++|.++|+.|+++.+.                    ..+|++|.++++++++.      .++|+||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~------~~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAK------EKPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhc------cCCCEEE
Confidence            699999999999999999999988765432                    14799999988887774      2579999


Q ss_pred             eccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-------------C--C-c
Q 024551          102 NNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-------------P--R-L  165 (266)
Q Consensus       102 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-------------~--~-~  165 (266)
                      |+|+.......   ..++.++.++.|+.++..+++++    ++.+..++|++||...+.+.             +  + .
T Consensus        55 h~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         55 LAAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             Eeeeeecccch---hhhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            99996431110   11223456888999999998887    44445689999997543211             1  1 2


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC-----ccchhHHHH-HHHHh----------cCCCCC
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD-----LNDLLVQEY-VKLIA----------KTPLAR  229 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~-----~~~~~~~~~-~~~~~----------~~~~~~  229 (266)
                      ..|+.+|.+.+.+++.+..+   .++++..+.|+.+-.+.....     .-....... .....          ..+.+.
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            25999999999998887655   368999999998887653210     001111110 01111          122346


Q ss_pred             CCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          230 SAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       230 ~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +..++|++++++.++....   .+..+++.+|..+
T Consensus       205 ~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~  236 (306)
T PLN02725        205 FLHVDDLADAVVFLMRRYS---GAEHVNVGSGDEV  236 (306)
T ss_pred             cccHHHHHHHHHHHHhccc---cCcceEeCCCCcc
Confidence            7888999999999885421   2345678776543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.57  E-value=2.3e-13  Score=122.76  Aligned_cols=216  Identities=15%  Similarity=0.076  Sum_probs=140.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +.++++||||+|.||++++++|.++|++|++++|......+....+.. ..++.++..|+.+..            . ..
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~------------~-~~  184 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI------------L-LE  184 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc------------c-cC
Confidence            467899999999999999999999999999998753221111111111 235777888887542            1 24


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC---------------
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS---------------  161 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~---------------  161 (266)
                      +|+|||+|+........    .+-++.+++|+.++..+++++.    +.+ .++|++||...+..               
T Consensus       185 ~D~ViHlAa~~~~~~~~----~~p~~~~~~Nv~gT~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  255 (436)
T PLN02166        185 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVN  255 (436)
T ss_pred             CCEEEECceeccchhhc----cCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECcHHHhCCCCCCCCCccccccCC
Confidence            89999999865432221    1235679999999999988874    333 48999998753321               


Q ss_pred             -CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC---------CCCCC
Q 024551          162 -IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP---------LARSA  231 (266)
Q Consensus       162 -~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  231 (266)
                       ......|+.+|.+.+.+++.+...   .++++..+.|+.+..+........-......+.....+         .+.+.
T Consensus       256 p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi  332 (436)
T PLN02166        256 PIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQ  332 (436)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeE
Confidence             112346999999999999887654   46888888888777764321111111111112222211         23467


Q ss_pred             CccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          232 EPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       232 ~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      ..+|+++++..++...   ..| .+++-+|.
T Consensus       333 ~V~Dva~ai~~~~~~~---~~g-iyNIgs~~  359 (436)
T PLN02166        333 YVSDLVDGLVALMEGE---HVG-PFNLGNPG  359 (436)
T ss_pred             EHHHHHHHHHHHHhcC---CCc-eEEeCCCC
Confidence            7899999998887432   134 67776654

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.57  E-value=1.4e-13  Score=114.41  Aligned_cols=157  Identities=20%  Similarity=0.199  Sum_probs=118.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +++|||||.|=||++++++|++.|++|++++.-...-.+.+...     ...+++.|+.|.+-+++++++      .+||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~------~~id   69 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEE------NKID   69 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHh------cCCC
Confidence            47999999999999999999999999999987544333222221     167999999999999998885      4799


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------CCCCchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------SIPRLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~~~~~~~  167 (266)
                      .+||.||....+.    +.++-.+.++.|+.++..|++++    ++.+-..|||-||.+-+.           +..+..+
T Consensus        70 aViHFAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NP  141 (329)
T COG1087          70 AVVHFAASISVGE----SVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINP  141 (329)
T ss_pred             EEEECccccccch----hhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCc
Confidence            9999999765443    44555677999999999997766    666666777766655332           1224569


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEe
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVS  197 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~  197 (266)
                      |+.||...|.+.+.+++...   .++..+.
T Consensus       142 YG~sKlm~E~iL~d~~~a~~---~~~v~LR  168 (329)
T COG1087         142 YGRSKLMSEEILRDAAKANP---FKVVILR  168 (329)
T ss_pred             chhHHHHHHHHHHHHHHhCC---CcEEEEE
Confidence            99999999999999988754   4444443

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.56  E-value=3.8e-13  Score=113.62  Aligned_cols=184  Identities=14%  Similarity=0.112  Sum_probs=151.2

Q ss_pred             CCCEEEEecC-CCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024551           17 RGMTALVTGG-TRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD-   94 (266)
Q Consensus        17 ~~k~vlItGa-s~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   94 (266)
                      +.++|+|.|. +.-|++.+|..|-++|+.|+++..+.+..+.+.++-   ...+..+..|..++.++...+.+..+.+. 
T Consensus         2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~   78 (299)
T PF08643_consen    2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSR   78 (299)
T ss_pred             ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence            3468999995 799999999999999999999999988665544432   34577778888888777777776666541 


Q ss_pred             C------------cccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh---cCCCeEEE-EecCC
Q 024551           95 G------------KLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA---SGNASIVF-MSSVA  157 (266)
Q Consensus        95 ~------------~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~---~~~g~iv~-vss~~  157 (266)
                      .            ++..+|...... ..++++.++.++|.+.++.|+..++..++.++|+|+.   ++ .+||. .-|..
T Consensus        79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~-~~iil~~Psi~  157 (299)
T PF08643_consen   79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQK-SKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-ceEEEEeCchh
Confidence            1            356677666644 4788999999999999999999999999999999998   43 45555 55777


Q ss_pred             CCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCC
Q 024551          158 GAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQ  204 (266)
Q Consensus       158 ~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~  204 (266)
                      +....|....-.....++.+|++.|++|+..++|.|..+..|.++-.
T Consensus       158 ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  158 SSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            77888899999999999999999999999999999999999988865

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.54  E-value=1.7e-12  Score=98.36  Aligned_cols=218  Identities=18%  Similarity=0.144  Sum_probs=159.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-CCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-DGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~   96 (266)
                      -.+|+|.|+-+.+|.+++..|.++++-|.-++-.+..          ....-..+..|-+--++-+++++++-+.+ +.+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe----------~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gek   72 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE----------QADSSILVDGNKSWTEQEQSVLEQVGSSLQGEK   72 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc----------cccceEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence            4688999999999999999999999998876654431          11222344455555567777787777765 357


Q ss_pred             ccEEEeccccccccCCCCC-CHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           97 LNILVNNAALVVMKRATEY-TLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      +|.+++-||...-+.-..- -....+-++.-.+.......+.+..+++.  .|-+-..+.-.+..+.|++..|+.+|+|+
T Consensus        73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMAKaAV  150 (236)
T KOG4022|consen   73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMAKAAV  150 (236)
T ss_pred             cceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHHHHHH
Confidence            9999999997754332211 12334455666666666666666665554  35566666667788999999999999999


Q ss_pred             HHHHHHHHHHhc--cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          176 NQLTKNLACEWA--TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       176 ~~~~~~~a~el~--~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      ..++++++.+-.  +.|-.+..|.|=-.||||.+.++++..+.            .+...+.+++..+-...+..+--+|
T Consensus       151 HqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfs------------sWTPL~fi~e~flkWtt~~~RPssG  218 (236)
T KOG4022|consen  151 HQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFS------------SWTPLSFISEHFLKWTTETSRPSSG  218 (236)
T ss_pred             HHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCccc------------CcccHHHHHHHHHHHhccCCCCCCC
Confidence            999999987643  45778999999999999999998875443            4566788999988888777777788


Q ss_pred             cEEEeC
Q 024551          254 QVISID  259 (266)
Q Consensus       254 ~~l~vd  259 (266)
                      ..|.+.
T Consensus       219 sLlqi~  224 (236)
T KOG4022|consen  219 SLLQIT  224 (236)
T ss_pred             ceEEEE
Confidence            887663

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.54  E-value=5.5e-13  Score=106.43  Aligned_cols=173  Identities=17%  Similarity=0.095  Sum_probs=126.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNIL  100 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~l  100 (266)
                      |+|+||||.+|+.++++|.++|++|+++.|++++.++        ..+++++++|+.|++++.+.+.        ..|.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~--------~~d~v   64 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK--------GADAV   64 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT--------TSSEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh--------hcchh
Confidence            6899999999999999999999999999999987765        4689999999999988877766        48999


Q ss_pred             EeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc---------hhhhhh
Q 024551          101 VNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL---------SAYAAS  171 (266)
Q Consensus       101 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~---------~~y~~s  171 (266)
                      |+++|....        +             ...++.++..+++.+-.++|++|+.......+..         ..|...
T Consensus        65 i~~~~~~~~--------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (183)
T PF13460_consen   65 IHAAGPPPK--------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD  123 (183)
T ss_dssp             EECCHSTTT--------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred             hhhhhhhcc--------c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence            999975432        0             4556666777777777899999998876654442         245555


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      |...+.+.       ...+++...+.|+++..+......-...        .........+.+|+|++++.++.
T Consensus       124 ~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~--------~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  124 KREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKE--------GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESS--------TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEec--------cCCCCcCcCCHHHHHHHHHHHhC
Confidence            55544333       2458999999999988765331100000        01111245678999999988763

...

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.5e-12  Score=123.82  Aligned_cols=219  Identities=21%  Similarity=0.186  Sum_probs=141.3

Q ss_pred             EEEEecCCCchHHHHHHHHH--HCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHH--HHHHHHHHhhcC
Q 024551           20 TALVTGGTRGIGYAIVEELA--RFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQR--EKLIETVSSVFD   94 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la--~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i--~~~~~~~~~~~~   94 (266)
                      ++|||||+|.||++++++|.  ++|++|++++|+... ....+.....+ .++.++..|++|++..  ...++.+     
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-----
Confidence            69999999999999999999  589999999996532 22222222112 4688999999985320  1112222     


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC------------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI------------  162 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~------------  162 (266)
                      ..+|++||+|+.....    .+   .+...++|+.++.++++++    .+.+..++|++||...+...            
T Consensus        76 ~~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~  144 (657)
T PRK07201         76 GDIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAVAGDYEGVFREDDFDEG  144 (657)
T ss_pred             cCCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEeccccccCccCccccccchhh
Confidence            3589999999965321    12   3456788999998887776    44445799999997654211            


Q ss_pred             -CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc---cchh--HHHHHHHHh---cCCC------
Q 024551          163 -PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL---NDLL--VQEYVKLIA---KTPL------  227 (266)
Q Consensus       163 -~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~---~~~~--~~~~~~~~~---~~~~------  227 (266)
                       .....|+.+|...+.+++.      ..|+++..+.|+.+..+......   ....  .........   ..+.      
T Consensus       145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (657)
T PRK07201        145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGG  218 (657)
T ss_pred             cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCC
Confidence             1235699999999998863      24799999999998765322111   1100  011111110   0111      


Q ss_pred             -CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          228 -ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       228 -~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                       ..+...+|+++++..++..  ....|+.+++-++..
T Consensus       219 ~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~  253 (657)
T PRK07201        219 RTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKP  253 (657)
T ss_pred             eeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCC
Confidence             1245578999999988853  335788888876643

>PRK05865 hypothetical protein; Provisional

Probab=99.50  E-value=3.6e-13  Score=128.77  Aligned_cols=182  Identities=16%  Similarity=0.154  Sum_probs=127.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++||||+|.||++++++|.++|++|++++|+....      +   ...+.++.+|++|.+++.++++        .+|
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~--------~vD   63 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT--------GAD   63 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh--------CCC
Confidence            3699999999999999999999999999999975321      1   1257788999999999887765        389


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      ++||+|+....             .+++|+.++.++++++    ++.+.++||++||..              |.+.+.+
T Consensus        64 ~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~--------------K~aaE~l  112 (854)
T PRK05865         64 VVAHCAWVRGR-------------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH--------------QPRVEQM  112 (854)
T ss_pred             EEEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH--------------HHHHHHH
Confidence            99999985321             3678999988876554    555567999999853              7777766


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC------CCCCCccchHHHHHHHhcCCCCCcc
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL------ARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++       .+++.+..+.|+.+..+....     ....... ....+.      ..+...+|++++++.++...  ...
T Consensus       113 l~-------~~gl~~vILRp~~VYGP~~~~-----~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~--~~~  177 (854)
T PRK05865        113 LA-------DCGLEWVAVRCALIFGRNVDN-----WVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDT--VID  177 (854)
T ss_pred             HH-------HcCCCEEEEEeceEeCCChHH-----HHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCC--CcC
Confidence            64       247999999999888763111     1110000 000111      13577899999999887422  123


Q ss_pred             ccEEEeCCCcc
Q 024551          253 GQVISIDGGYT  263 (266)
Q Consensus       253 G~~l~vdgG~~  263 (266)
                      |..+++-+|..
T Consensus       178 ggvyNIgsg~~  188 (854)
T PRK05865        178 SGPVNLAAPGE  188 (854)
T ss_pred             CCeEEEECCCc
Confidence            45677766643

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.46  E-value=1.5e-12  Score=109.43  Aligned_cols=156  Identities=26%  Similarity=0.285  Sum_probs=120.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh---cCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES---KGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++||||||.+-||.+++.+|.++|+.|++++.-........+.+++   .+..+.+++.|++|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            68999999999999999999999999999987633332222233222   2578999999999999999999865     


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------CCC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------SIP  163 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~~~  163 (266)
                       ++|.|+|.|+....+.    +.+.-.+....|+.+++.++..+    ++.+-..+|+.||..-+.           +..
T Consensus        77 -~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~t~  147 (343)
T KOG1371|consen   77 -KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDPTD  147 (343)
T ss_pred             -CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCCCC
Confidence             5999999999765432    23333778999999999996665    666567899988876542           111


Q ss_pred             -CchhhhhhHHHHHHHHHHHHHHhc
Q 024551          164 -RLSAYAASKGAINQLTKNLACEWA  187 (266)
Q Consensus       164 -~~~~y~~sK~al~~~~~~~a~el~  187 (266)
                       +...|+.+|.+++...+.....+.
T Consensus       148 ~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  148 QPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCcchhhhHHHHHHHHhhhcccc
Confidence             467899999999999999877655

>PLN02996 fatty acyl-CoA reductase

Probab=99.46  E-value=9.7e-12  Score=113.94  Aligned_cols=223  Identities=17%  Similarity=0.181  Sum_probs=143.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEecCChhH---HHHHHHHH---------Hh-c--------CCeeEE
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNM---INERIQEW---------ES-K--------GFKVTG   71 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~---~v~~~~r~~~~---~~~~~~~l---------~~-~--------~~~~~~   71 (266)
                      ++||+++||||||.||+.++..|++.+.   +|+++.|..+.   .+.+..++         .+ .        ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            7999999999999999999999998653   47788885531   11111111         11 0        157899


Q ss_pred             EeccCCCH-------HHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh
Q 024551           72 SVCDLSFG-------DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA  144 (266)
Q Consensus        72 ~~~D~~~~-------~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~  144 (266)
                      +..|++++       +.++.+++        .+|+|||+|+.....       +..+..+++|+.++.++++++...   
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~--------~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---  150 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK--------EIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC---  150 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh--------CCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc---
Confidence            99999843       33333332        489999999965421       235678999999999998887421   


Q ss_pred             cCCCeEEEEecCCCCCCC---------C----------------------------------------------------
Q 024551          145 SGNASIVFMSSVAGAISI---------P----------------------------------------------------  163 (266)
Q Consensus       145 ~~~g~iv~vss~~~~~~~---------~----------------------------------------------------  163 (266)
                      .+..++|++||...+...         +                                                    
T Consensus       151 ~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (491)
T PLN02996        151 VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLH  230 (491)
T ss_pred             CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhC
Confidence            234589999987643210         0                                                    


Q ss_pred             -CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC---ccch-hHHHH-HHHHhc---------CCCC
Q 024551          164 -RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD---LNDL-LVQEY-VKLIAK---------TPLA  228 (266)
Q Consensus       164 -~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~---~~~~-~~~~~-~~~~~~---------~~~~  228 (266)
                       ....|+.||+..+.+++..+     .++.+..+.|+.|..+...+.   .+.. ..... ......         ...+
T Consensus       231 ~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~  305 (491)
T PLN02996        231 GWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVL  305 (491)
T ss_pred             CCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeec
Confidence             11359999999999997642     379999999999987654331   1110 00000 101111         1135


Q ss_pred             CCCCccchHHHHHHHhcCCC-CCccccEEEeCCC
Q 024551          229 RSAEPNEISPLVAFLCLPAA-SYITGQVISIDGG  261 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~~~-~~~~G~~l~vdgG  261 (266)
                      .+..+++++++++.++.... ..-.+.++++.+|
T Consensus       306 D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        306 DVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             ceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            66788999999888775321 1124677888766

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.45  E-value=1.4e-12  Score=112.35  Aligned_cols=146  Identities=19%  Similarity=0.184  Sum_probs=107.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +++|||||+|.||++++++|.++| +|+.++|...                 .+..|++|.+.++++++..      ++|
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~------~~D   56 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI------RPD   56 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc------CCC
Confidence            369999999999999999999999 7888887531                 2357999999988887742      589


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------CCCCchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------SIPRLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~~~~~~~  167 (266)
                      ++||+|+.......    .++-+..+.+|+.++.++++++.    +.+ .++|++||...+.           +..+...
T Consensus        57 ~Vih~Aa~~~~~~~----~~~~~~~~~~N~~~~~~l~~aa~----~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~  127 (299)
T PRK09987         57 VIVNAAAHTAVDKA----ESEPEFAQLLNATSVEAIAKAAN----EVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNV  127 (299)
T ss_pred             EEEECCccCCcchh----hcCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence            99999997643221    12234557899999999988873    333 4899999864321           1123457


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQ  204 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~  204 (266)
                      |+.+|.+.+.+++.+..       +...+.|+++..+
T Consensus       128 Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp  157 (299)
T PRK09987        128 YGETKLAGEKALQEHCA-------KHLIFRTSWVYAG  157 (299)
T ss_pred             HHHHHHHHHHHHHHhCC-------CEEEEecceecCC
Confidence            99999999999876532       3366777777655

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.41  E-value=6.4e-12  Score=114.31  Aligned_cols=162  Identities=19%  Similarity=0.253  Sum_probs=118.4

Q ss_pred             CCCEEE----EecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           17 RGMTAL----VTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        17 ~~k~vl----ItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .|..++    |+||++|+|.+++..|...|+.|+.+.+.+...                                 ....
T Consensus        33 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~---------------------------------~~~~   79 (450)
T PRK08261         33 PGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW---------------------------------AAGW   79 (450)
T ss_pred             CCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc---------------------------------ccCc
Confidence            455666    888889999999999999999999877654310                                 0000


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       ..+++.++.-+-..     .  +.+++        .+.+.+.+..++.|.+  .|+||+++|..+..   ....|+++|
T Consensus        80 -~~~~~~~~~d~~~~-----~--~~~~l--------~~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~ak  138 (450)
T PRK08261         80 -GDRFGALVFDATGI-----T--DPADL--------KALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQ  138 (450)
T ss_pred             -CCcccEEEEECCCC-----C--CHHHH--------HHHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHH
Confidence             02355444322111     0  12222        2444667777887754  57999999976653   345799999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++.+|+|++++|+ .++++++.|.|++                              ..+++++..+.|++++...|++
T Consensus       139 aal~gl~rsla~E~-~~gi~v~~i~~~~------------------------------~~~~~~~~~~~~l~s~~~a~~~  187 (450)
T PRK08261        139 RALEGFTRSLGKEL-RRGATAQLVYVAP------------------------------GAEAGLESTLRFFLSPRSAYVS  187 (450)
T ss_pred             HHHHHHHHHHHHHh-hcCCEEEEEecCC------------------------------CCHHHHHHHHHHhcCCccCCcc
Confidence            99999999999999 7899999999874                              2477888899999999999999


Q ss_pred             ccEEEeCCCcc
Q 024551          253 GQVISIDGGYT  263 (266)
Q Consensus       253 G~~l~vdgG~~  263 (266)
                      |+.+.++++..
T Consensus       188 g~~i~~~~~~~  198 (450)
T PRK08261        188 GQVVRVGAADA  198 (450)
T ss_pred             CcEEEecCCcc
Confidence            99999998764

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.38  E-value=7.6e-11  Score=93.53  Aligned_cols=168  Identities=18%  Similarity=0.074  Sum_probs=117.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++||||+ |+|.+++++|+++|++|++++|+++..+.+...+.. ...+.++++|++|+++++++++.+.+.+ +++|
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id   77 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFD   77 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCe
Confidence            468999998 788889999999999999999998887777665543 4578889999999999999999998887 7899


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC----CCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG----NASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~----~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      ++|+..-...                      +-.+..++    ++.+    .-+++.|-++.+.-+             
T Consensus        78 ~lv~~vh~~~----------------------~~~~~~~~----~~~gv~~~~~~~~h~~gs~~~~~-------------  118 (177)
T PRK08309         78 LAVAWIHSSA----------------------KDALSVVC----RELDGSSETYRLFHVLGSAASDP-------------  118 (177)
T ss_pred             EEEEeccccc----------------------hhhHHHHH----HHHccCCCCceEEEEeCCcCCch-------------
Confidence            9997665421                      22232333    3333    237888865443211             


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc-CCCCCccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL-PAASYITG  253 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s-~~~~~~~G  253 (266)
                           +.....++..+....-|..||+.++-..                     |+.+-+||++.++--.. +...++.|
T Consensus       119 -----~~~~~~~~~~~~~~~~i~lgf~~~~~~~---------------------rwlt~~ei~~gv~~~~~~~~~~~~~g  172 (177)
T PRK08309        119 -----RIPSEKIGPARCSYRRVILGFVLEDTYS---------------------RWLTHEEISDGVIKAIESDADEHVVG  172 (177)
T ss_pred             -----hhhhhhhhhcCCceEEEEEeEEEeCCcc---------------------ccCchHHHHHHHHHHHhcCCCeEEEE
Confidence                 1222333444566667788988764322                     67788888888876554 45555665


Q ss_pred             c
Q 024551          254 Q  254 (266)
Q Consensus       254 ~  254 (266)
                      +
T Consensus       173 ~  173 (177)
T PRK08309        173 T  173 (177)
T ss_pred             E
Confidence            5

>PLN02778 3,5-epimerase/4-reductase

Probab=99.38  E-value=6.8e-11  Score=101.85  Aligned_cols=193  Identities=16%  Similarity=0.109  Sum_probs=115.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      .+++|||||+|.||++++++|.++|++|+...                        .|+.|.+.+...++.      .++
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~------~~~   58 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA------VKP   58 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh------cCC
Confidence            36899999999999999999999999987432                        244555555544442      258


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC--C------------C---
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG--A------------I---  160 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~--~------------~---  160 (266)
                      |++||+|+....... +...++-.+.+++|+.++.++++++.    +.+. +.+++||...  .            .   
T Consensus        59 D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~----~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~  132 (298)
T PLN02778         59 THVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCR----ERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEED  132 (298)
T ss_pred             CEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CEEEEecceEeCCCCCCCcccCCCCCcCC
Confidence            999999997643211 11223346789999999999988884    3333 3455554321  1            0   


Q ss_pred             -CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC---C-CCCCCccc
Q 024551          161 -SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP---L-ARSAEPNE  235 (266)
Q Consensus       161 -~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~e  235 (266)
                       +.+....|+.||.+.+.+++.++..   .++|+     ++...+..  .......   .......+   . +.+...+|
T Consensus       133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~--~~~~~fi---~~~~~~~~~~~~~~s~~yv~D  199 (298)
T PLN02778        133 TPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDL--SNPRNFI---TKITRYEKVVNIPNSMTILDE  199 (298)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCccc--ccHHHHH---HHHHcCCCeeEcCCCCEEHHH
Confidence             1112357999999999999876532   23443     22111100  0001111   12222111   1 23566788


Q ss_pred             hHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          236 ISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       236 ia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++++++.++...   .+| .+++.+|..
T Consensus       200 ~v~al~~~l~~~---~~g-~yNigs~~~  223 (298)
T PLN02778        200 LLPISIEMAKRN---LTG-IYNFTNPGV  223 (298)
T ss_pred             HHHHHHHHHhCC---CCC-eEEeCCCCc
Confidence            998888888432   234 777755543

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.35  E-value=2e-11  Score=102.47  Aligned_cols=164  Identities=19%  Similarity=0.203  Sum_probs=99.9

Q ss_pred             EecCCCchHHHHHHHHHHCCC--eEEEecCChhH---HHHHHHHHH----------hcCCeeEEEeccCCCHH-HH-HHH
Q 024551           23 VTGGTRGIGYAIVEELARFGA--SVHTCGRDQNM---INERIQEWE----------SKGFKVTGSVCDLSFGD-QR-EKL   85 (266)
Q Consensus        23 ItGas~giG~aia~~la~~G~--~v~~~~r~~~~---~~~~~~~l~----------~~~~~~~~~~~D~~~~~-~i-~~~   85 (266)
                      ||||||.+|..+..+|++++.  +|+++.|..+.   .+.+.+.+.          ....+++++..|++++. .+ ...
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997643   233322222          12569999999999864 11 122


Q ss_pred             HHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC--C--
Q 024551           86 IETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI--S--  161 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~--~--  161 (266)
                      .+++.    ..+|++||||+......       .+++..++|+.|+.++++.+.    ..+..++++|||.....  .  
T Consensus        81 ~~~L~----~~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~----~~~~~~~~~iSTa~v~~~~~~~  145 (249)
T PF07993_consen   81 YQELA----EEVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAA----QGKRKRFHYISTAYVAGSRPGT  145 (249)
T ss_dssp             HHHHH----HH--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHT----SSS---EEEEEEGGGTTS-TTT
T ss_pred             hhccc----cccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHH----hccCcceEEeccccccCCCCCc
Confidence            22232    25899999999654321       244578899999999988873    34445999999932211  1  


Q ss_pred             ----------------CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCC
Q 024551          162 ----------------IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQ  204 (266)
Q Consensus       162 ----------------~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~  204 (266)
                                      ......|..||..-|.+.+.++.+   .|+.+..+.||.+-..
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  146 IEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             --SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred             ccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence                            012358999999999999988765   4788999999988773

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.34  E-value=3.8e-12  Score=108.93  Aligned_cols=180  Identities=18%  Similarity=0.178  Sum_probs=119.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +++||||++|-||.++.++|.++|+.|+.++|.                     .+|++|.+++.+++.+.      ++|
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~------~pd   53 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF------KPD   53 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--------S
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh------CCC
Confidence            379999999999999999999999999999876                     57999999999988765      589


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------CCchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------PRLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~  167 (266)
                      ++||+|+.......    .++-+..+.+|+.++..+.+.+    .+. +.++|++||..-+.+.           .+...
T Consensus        54 ~Vin~aa~~~~~~c----e~~p~~a~~iN~~~~~~la~~~----~~~-~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~  124 (286)
T PF04321_consen   54 VVINCAAYTNVDAC----EKNPEEAYAINVDATKNLAEAC----KER-GARLIHISTDYVFDGDKGGPYTEDDPPNPLNV  124 (286)
T ss_dssp             EEEE------HHHH----HHSHHHHHHHHTHHHHHHHHHH----HHC-T-EEEEEEEGGGS-SSTSSSB-TTS----SSH
T ss_pred             eEeccceeecHHhh----hhChhhhHHHhhHHHHHHHHHH----HHc-CCcEEEeeccEEEcCCcccccccCCCCCCCCH
Confidence            99999998643322    2335567999999999998887    343 4699999997543222           13568


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh-cCC-------CCCCCCccchHHH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA-KTP-------LARSAEPNEISPL  239 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~eia~~  239 (266)
                      |+-+|...|..++...       -+...+.++++-.+. ..    ........... ..+       .......+|+|+.
T Consensus       125 YG~~K~~~E~~v~~~~-------~~~~IlR~~~~~g~~-~~----~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~  192 (286)
T PF04321_consen  125 YGRSKLEGEQAVRAAC-------PNALILRTSWVYGPS-GR----NFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARV  192 (286)
T ss_dssp             HHHHHHHHHHHHHHH--------SSEEEEEE-SEESSS-SS----SHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc-------CCEEEEecceecccC-CC----chhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHH
Confidence            9999999999988621       156677778777661 11    11222222211 111       1233456999999


Q ss_pred             HHHHhcC
Q 024551          240 VAFLCLP  246 (266)
Q Consensus       240 ~~~l~s~  246 (266)
                      +..++..
T Consensus       193 i~~l~~~  199 (286)
T PF04321_consen  193 ILELIEK  199 (286)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999853

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.33  E-value=3.4e-11  Score=102.92  Aligned_cols=195  Identities=12%  Similarity=0.049  Sum_probs=119.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +++||||||.+|+.++++|.++|++|.+.+|+++...         ...+..+.+|+.|++++..+++.. +...+.+|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeE
Confidence            3799999999999999999999999999999987432         124556789999999999988653 222123899


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHHH
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT  179 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~  179 (266)
                      ++++++...       .  ..            ...+.++..+++.+-.+||++||.....+.+       .+...+.+.
T Consensus        71 v~~~~~~~~-------~--~~------------~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~-------~~~~~~~~l  122 (285)
T TIGR03649        71 VYLVAPPIP-------D--LA------------PPMIKFIDFARSKGVRRFVLLSASIIEKGGP-------AMGQVHAHL  122 (285)
T ss_pred             EEEeCCCCC-------C--hh------------HHHHHHHHHHHHcCCCEEEEeeccccCCCCc-------hHHHHHHHH
Confidence            999877421       0  00            0112344555666667999999865433211       222222222


Q ss_pred             HHHHHHhcc-CCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh--cCCCCCCCCccchHHHHHHHhcCCCCCccccEE
Q 024551          180 KNLACEWAT-DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA--KTPLARSAEPNEISPLVAFLCLPAASYITGQVI  256 (266)
Q Consensus       180 ~~~a~el~~-~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l  256 (266)
                             .. .|+....+.|+++...+............ .....  ......+.+++|+|+++..++.+.. . .|..+
T Consensus       123 -------~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~-~-~~~~~  192 (285)
T TIGR03649       123 -------DSLGGVEYTVLRPTWFMENFSEEFHVEAIRKE-NKIYSATGDGKIPFVSADDIARVAYRALTDKV-A-PNTDY  192 (285)
T ss_pred             -------HhccCCCEEEEeccHHhhhhcccccccccccC-CeEEecCCCCccCcccHHHHHHHHHHHhcCCC-c-CCCeE
Confidence                   22 38999999999877654222111100000 00000  0111246788999999998886532 2 24555


Q ss_pred             EeCCCc
Q 024551          257 SIDGGY  262 (266)
Q Consensus       257 ~vdgG~  262 (266)
                      .+-|+.
T Consensus       193 ~l~g~~  198 (285)
T TIGR03649       193 VVLGPE  198 (285)
T ss_pred             EeeCCc
Confidence            555543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.30  E-value=8.5e-10  Score=113.17  Aligned_cols=226  Identities=18%  Similarity=0.194  Sum_probs=142.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCC----CeEEEecCChhHHH---HHHHHHHhc-------CCeeEEEeccCCCHHH-
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFG----ASVHTCGRDQNMIN---ERIQEWESK-------GFKVTGSVCDLSFGDQ-   81 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G----~~v~~~~r~~~~~~---~~~~~l~~~-------~~~~~~~~~D~~~~~~-   81 (266)
                      ..++++|||++|.||..++.+|++++    ++|+...|+.+...   .+.+.+...       ..++.++..|++++.- 
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            36899999999999999999999987    78998888754322   222222211       1368899999986521 


Q ss_pred             -HHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC
Q 024551           82 -REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI  160 (266)
Q Consensus        82 -i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~  160 (266)
                       -....+++.    ..+|++||||+....    ..+   ++.....|+.++..+++.+.    +.+..+++++||.+.+.
T Consensus      1050 l~~~~~~~l~----~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a~----~~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443      1050 LSDEKWSDLT----NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLCA----EGKAKQFSFVSSTSALD 1114 (1389)
T ss_pred             cCHHHHHHHH----hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHHH----hCCCceEEEEeCeeecC
Confidence             011122221    358999999996532    112   33445679999999988773    33445899999975431


Q ss_pred             C-----------------C-----------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-
Q 024551          161 S-----------------I-----------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-  211 (266)
Q Consensus       161 ~-----------------~-----------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-  211 (266)
                      .                 .           .....|+.||.+.+.+++.++.    .|+.+..+.||.+..+....... 
T Consensus      1115 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~ 1190 (1389)
T TIGR03443      1115 TEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATNT 1190 (1389)
T ss_pred             cccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCCc
Confidence            1                 0           0123599999999999886533    48999999999997653322211 


Q ss_pred             chhHHHHHH---HHhcCC----CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCC
Q 024551          212 DLLVQEYVK---LIAKTP----LARSAEPNEISPLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       212 ~~~~~~~~~---~~~~~~----~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      .........   .....|    ...+...++++++++.++........+.++.+.++
T Consensus      1191 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~ 1247 (1389)
T TIGR03443      1191 DDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH 1247 (1389)
T ss_pred             hhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC
Confidence            111111111   111122    13466789999999988754322223445656554

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.29  E-value=3e-10  Score=95.28  Aligned_cols=180  Identities=16%  Similarity=0.133  Sum_probs=127.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNIL  100 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~l  100 (266)
                      +||||++|-+|.++++.|. .++.|+.++|..                     +|++|++.+.+++++.      ++|++
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~------~PDvV   54 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET------RPDVV   54 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh------CCCEE
Confidence            8999999999999999999 778899888754                     7999999999999975      68999


Q ss_pred             EeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------CCchhhh
Q 024551          101 VNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------PRLSAYA  169 (266)
Q Consensus       101 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~y~  169 (266)
                      ||+|+.......+.    +-+.-+.+|..++.++++++    .+- +.++|++|+-.-+-+.           .+...|+
T Consensus        55 In~AAyt~vD~aE~----~~e~A~~vNa~~~~~lA~aa----~~~-ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG  125 (281)
T COG1091          55 INAAAYTAVDKAES----EPELAFAVNATGAENLARAA----AEV-GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG  125 (281)
T ss_pred             EECccccccccccC----CHHHHHHhHHHHHHHHHHHH----HHh-CCeEEEeecceEecCCCCCCCCCCCCCCChhhhh
Confidence            99999876544333    24567999999999999988    343 4799999986543322           2457999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC-------CCCCCCccchHHHHHH
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP-------LARSAEPNEISPLVAF  242 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~eia~~~~~  242 (266)
                      .||.+-|..++...       -+...+...|+-.....+ +-....   .......+       .+.....+|+|+++..
T Consensus       126 ~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~n-Fv~tml---~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~  194 (281)
T COG1091         126 RSKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNN-FVKTML---RLAKEGKELKVVDDQYGSPTYTEDLADAILE  194 (281)
T ss_pred             HHHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCC-HHHHHH---HHhhcCCceEEECCeeeCCccHHHHHHHHHH
Confidence            99999999998753       233334444444433211 111111   11111111       2344567999999999


Q ss_pred             HhcCCC
Q 024551          243 LCLPAA  248 (266)
Q Consensus       243 l~s~~~  248 (266)
                      |+....
T Consensus       195 ll~~~~  200 (281)
T COG1091         195 LLEKEK  200 (281)
T ss_pred             HHhccc
Confidence            886543

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.29  E-value=1.4e-10  Score=100.54  Aligned_cols=225  Identities=18%  Similarity=0.174  Sum_probs=149.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++.+++||||+|.+|++++.+|.+++  ..+.+++..+..-.-..+.......++.++.+|+.|..++.+.+.       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            56899999999999999999999998  778888876642111122221135689999999999999888777       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC------------CC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI------------SI  162 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~------------~~  162 (266)
                      + . .+||+|....+.-    -..+-+..+++|+.++..++..+    .+.+-.++|++||..-..            +.
T Consensus        76 ~-~-~Vvh~aa~~~~~~----~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~  145 (361)
T KOG1430|consen   76 G-A-VVVHCAASPVPDF----VENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIINGDESLPY  145 (361)
T ss_pred             C-c-eEEEeccccCccc----cccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccCCCCCCC
Confidence            4 4 6666666443322    22246678999999988887766    566677999999976533            22


Q ss_pred             C--CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh-------cCCCCCCCCc
Q 024551          163 P--RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA-------KTPLARSAEP  233 (266)
Q Consensus       163 ~--~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  233 (266)
                      |  ....|+.||+--|.+++..+.   ..+....++.|-.|-.|.-+...+.-. + ......       ....-.+...
T Consensus       146 p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~-~-~~~~g~~~f~~g~~~~~~~~~~~  220 (361)
T KOG1430|consen  146 PLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIV-E-ALKNGGFLFKIGDGENLNDFTYG  220 (361)
T ss_pred             ccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHH-H-HHHccCceEEeeccccccceEEe
Confidence            3  235899999999999987654   456788999998888765444322211 1 111000       0111123334


Q ss_pred             cchHHHHH---HHhcCCCCCccccEEEeCCCcc
Q 024551          234 NEISPLVA---FLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       234 ~eia~~~~---~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +-++.+.+   .-+.+....++||.+.+..|.-
T Consensus       221 ~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p  253 (361)
T KOG1430|consen  221 ENVAWAHILAARALLDKSPSVNGQFYFITDDTP  253 (361)
T ss_pred             chhHHHHHHHHHHHHhcCCccCceEEEEeCCCc
Confidence            44554432   1122367789999999987753

>PLN00016 RNA-binding protein; Provisional

Probab=99.24  E-value=5.4e-10  Score=99.49  Aligned_cols=201  Identities=15%  Similarity=0.194  Sum_probs=125.9

Q ss_pred             cCCCCEEEEe----cCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHH-------HHHHhcCCeeEEEeccCCCHHHHH
Q 024551           15 SLRGMTALVT----GGTRGIGYAIVEELARFGASVHTCGRDQNMINERI-------QEWESKGFKVTGSVCDLSFGDQRE   83 (266)
Q Consensus        15 ~~~~k~vlIt----Gas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~i~   83 (266)
                      ....|+||||    ||+|.||+.++++|.++|++|++++|+......+.       .++..  ..+.++..|+.|   +.
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~  123 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VK  123 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HH
Confidence            3455789999    99999999999999999999999999875432221       12222  247788888876   33


Q ss_pred             HHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC
Q 024551           84 KLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP  163 (266)
Q Consensus        84 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~  163 (266)
                      +++    ..  ..+|++||+++..         .+           +    ++.++..+++.+-.++|++||...+....
T Consensus       124 ~~~----~~--~~~d~Vi~~~~~~---------~~-----------~----~~~ll~aa~~~gvkr~V~~SS~~vyg~~~  173 (378)
T PLN00016        124 SKV----AG--AGFDVVYDNNGKD---------LD-----------E----VEPVADWAKSPGLKQFLFCSSAGVYKKSD  173 (378)
T ss_pred             hhh----cc--CCccEEEeCCCCC---------HH-----------H----HHHHHHHHHHcCCCEEEEEccHhhcCCCC
Confidence            332    11  3589999987621         11           1    22334444556667999999986543211


Q ss_pred             C--------chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC---------
Q 024551          164 R--------LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP---------  226 (266)
Q Consensus       164 ~--------~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------  226 (266)
                      .        ...+. +|...+.+.+       ..++.+..+.|+.+..+...........   .......+         
T Consensus       174 ~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~---~~~~~~~~i~~~g~g~~  242 (378)
T PLN00016        174 EPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFF---DRLVRGRPVPIPGSGIQ  242 (378)
T ss_pred             CCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHH---HHHHcCCceeecCCCCe
Confidence            1        01122 7887776653       2478999999999987753321111111   11111111         


Q ss_pred             CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          227 LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       227 ~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ...+...+|+++++..++...  ...|+.+++-++..
T Consensus       243 ~~~~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~  277 (378)
T PLN00016        243 LTQLGHVKDLASMFALVVGNP--KAAGQIFNIVSDRA  277 (378)
T ss_pred             eeceecHHHHHHHHHHHhcCc--cccCCEEEecCCCc
Confidence            123567899999999888542  23578888877653

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.22  E-value=9e-10  Score=94.89  Aligned_cols=164  Identities=21%  Similarity=0.241  Sum_probs=120.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChh---HHHHHHHHHH-------hcCCeeEEEeccCCCHH------H
Q 024551           19 MTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQN---MINERIQEWE-------SKGFKVTGSVCDLSFGD------Q   81 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~---~~~~~~~~l~-------~~~~~~~~~~~D~~~~~------~   81 (266)
                      +++++|||||.+|+.+..+|..+ .++|++..|..+   ..+.+.+.+.       ....++..+..|++.+.      .
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999998775 469999888544   3333334343       23578999999998442      2


Q ss_pred             HHHHHHHHHhhcCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC
Q 024551           82 REKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI  160 (266)
Q Consensus        82 i~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~  160 (266)
                      .+.+.        ..+|.+|||+.... ..+        +.+....|+.|+..+++.+    ...+...+.+|||++...
T Consensus        81 ~~~La--------~~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELA--------ENVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHh--------hhcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeecc
Confidence            22222        35899999998653 322        6678999999999998887    333344699999987643


Q ss_pred             CC--------------------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCC
Q 024551          161 SI--------------------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQIS  206 (266)
Q Consensus       161 ~~--------------------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~  206 (266)
                      ..                    .....|+-||.+-|.+++...    .+|.++..+.||.|-.+..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~----~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG----DRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh----hcCCCeEEEecCeeeccCc
Confidence            21                    123689999999999998654    3489999999999976554

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.21  E-value=2.2e-10  Score=97.93  Aligned_cols=208  Identities=16%  Similarity=0.096  Sum_probs=116.8

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNIL  100 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~l  100 (266)
                      +|||||+|.||.+++++|+++|++|++++|+++.......        ..  ..|+.. .       ...+.+ ..+|+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~--~~~~~~-~-------~~~~~~-~~~D~V   61 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW--------EG--YKPWAP-L-------AESEAL-EGADAV   61 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc--------ee--eecccc-c-------chhhhc-CCCCEE
Confidence            5899999999999999999999999999998765432110        00  112221 1       112223 469999


Q ss_pred             EeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC--CeEEEEecCCCCCCC----------C-Cchh
Q 024551          101 VNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN--ASIVFMSSVAGAISI----------P-RLSA  167 (266)
Q Consensus       101 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~--g~iv~vss~~~~~~~----------~-~~~~  167 (266)
                      ||+|+.....  ...+.+..+..+++|+.++..+++++    ++.+.  ..+++.|+...+...          + ....
T Consensus        62 vh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~  135 (292)
T TIGR01777        62 INLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAI----AAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDF  135 (292)
T ss_pred             EECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHH----HhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCCh
Confidence            9999964321  12344556678899999988887777    44432  234444443211100          0 1112


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHH-----HHhcCCCCCCCCccchHHHHHH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-----LIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      |...+...+...+    .+...++.+..+.|+.+..+... .. .........     .......+.+...+|+++++..
T Consensus       136 ~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~-~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~  209 (292)
T TIGR01777       136 LAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-AL-AKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILF  209 (292)
T ss_pred             HHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc-hh-HHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHH
Confidence            3333333333322    22345799999999999876321 11 110000000     0011122356778999999999


Q ss_pred             HhcCCCCCccccEEEeCCCc
Q 024551          243 LCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~  262 (266)
                      ++....  ..| .+++-++.
T Consensus       210 ~l~~~~--~~g-~~~~~~~~  226 (292)
T TIGR01777       210 ALENAS--ISG-PVNATAPE  226 (292)
T ss_pred             HhcCcc--cCC-ceEecCCC
Confidence            985422  234 45554443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK12320 hypothetical protein; Provisional

Probab=99.20  E-value=1.4e-09  Score=102.48  Aligned_cols=188  Identities=16%  Similarity=0.179  Sum_probs=119.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      ++|||||+|.||++++++|.++|++|++++|.....         ....+.++++|++++. +.+++        ..+|+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al--------~~~D~   63 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA--------GEADA   63 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh--------cCCCE
Confidence            699999999999999999999999999999875421         1236788999999873 33322        24899


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHHH
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT  179 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~  179 (266)
                      +||+|+....        +    ...+|+.++.++++++    ++.+ .++|++||..+.   +  ..|.    ..+.+.
T Consensus        64 VIHLAa~~~~--------~----~~~vNv~Gt~nLleAA----~~~G-vRiV~~SS~~G~---~--~~~~----~aE~ll  117 (699)
T PRK12320         64 VIHLAPVDTS--------A----PGGVGITGLAHVANAA----ARAG-ARLLFVSQAAGR---P--ELYR----QAETLV  117 (699)
T ss_pred             EEEcCccCcc--------c----hhhHHHHHHHHHHHHH----HHcC-CeEEEEECCCCC---C--cccc----HHHHHH
Confidence            9999986321        0    1247899999988777    4444 489999986432   1  1122    122222


Q ss_pred             HHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHH-HHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEe
Q 024551          180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISI  258 (266)
Q Consensus       180 ~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~v  258 (266)
                      +       ..++.+..+.|+.+..+....... ..... ........|+ +....+|++++++.++...   .+| .+++
T Consensus       118 ~-------~~~~p~~ILR~~nVYGp~~~~~~~-r~I~~~l~~~~~~~pI-~vIyVdDvv~alv~al~~~---~~G-iyNI  184 (699)
T PRK12320        118 S-------TGWAPSLVIRIAPPVGRQLDWMVC-RTVATLLRSKVSARPI-RVLHLDDLVRFLVLALNTD---RNG-VVDL  184 (699)
T ss_pred             H-------hcCCCEEEEeCceecCCCCcccHh-HHHHHHHHHHHcCCce-EEEEHHHHHHHHHHHHhCC---CCC-EEEE
Confidence            1       134778888888887763322111 11111 1111122222 2357899999998888532   245 7888


Q ss_pred             CCCccC
Q 024551          259 DGGYTA  264 (266)
Q Consensus       259 dgG~~~  264 (266)
                      .+|..+
T Consensus       185 G~~~~~  190 (699)
T PRK12320        185 ATPDTT  190 (699)
T ss_pred             eCCCee
Confidence            877543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.19  E-value=1.1e-10  Score=96.32  Aligned_cols=113  Identities=13%  Similarity=0.072  Sum_probs=85.9

Q ss_pred             CCccccCCCCEEEEecC-CCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGG-TRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGa-s~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ..++...=+.+=.||.. |||||+++|++|+++|++|+++++...        +....    ...+|+++.++++++++.
T Consensus         6 ~G~T~e~iD~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~~----~~~~Dv~d~~s~~~l~~~   73 (227)
T TIGR02114         6 SGGTSEPIDSVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPEP----HPNLSIREIETTKDLLIT   73 (227)
T ss_pred             cCCccCCCCCceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccccc----CCcceeecHHHHHHHHHH
Confidence            34444444566677775 678999999999999999999876321        11101    235899999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHH
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA  138 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  138 (266)
                      +.+.+ +++|++|||||+....++.+.+.++|++++   ..+.|++.+-.
T Consensus        74 v~~~~-g~iDiLVnnAgv~d~~~~~~~s~e~~~~~~---~~~~~~~~~~~  119 (227)
T TIGR02114        74 LKELV-QEHDILIHSMAVSDYTPVYMTDLEQVQASD---NLNEFLSKQNH  119 (227)
T ss_pred             HHHHc-CCCCEEEECCEeccccchhhCCHHHHhhhc---chhhhhccccc
Confidence            99988 789999999998877788889999999774   44666665533

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.14  E-value=1.8e-09  Score=100.40  Aligned_cols=125  Identities=18%  Similarity=0.240  Sum_probs=87.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEecCChhH---HHHHHHHH---------Hhc---------CCeeEE
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNM---INERIQEW---------ESK---------GFKVTG   71 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~---~v~~~~r~~~~---~~~~~~~l---------~~~---------~~~~~~   71 (266)
                      ++||+++||||||.||+.++++|++.+.   +|+++.|..+.   .+.+.+++         ++.         ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5799999999999999999999998763   57888885432   22222222         111         246889


Q ss_pred             EeccCCCHH------HHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc
Q 024551           72 SVCDLSFGD------QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS  145 (266)
Q Consensus        72 ~~~D~~~~~------~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~  145 (266)
                      +..|++++.      ..+.+.        ..+|++||+|+....       .+..+..+++|+.++.++++.+...   .
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~---~  258 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA--------KEVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC---K  258 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH--------hcCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc---C
Confidence            999999873      222222        248999999997542       1346678999999999998887421   1


Q ss_pred             CCCeEEEEecCCC
Q 024551          146 GNASIVFMSSVAG  158 (266)
Q Consensus       146 ~~g~iv~vss~~~  158 (266)
                      ...++|++||...
T Consensus       259 ~lk~fV~vSTayV  271 (605)
T PLN02503        259 KLKLFLQVSTAYV  271 (605)
T ss_pred             CCCeEEEccCcee
Confidence            2357899888653

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.13  E-value=2.1e-09  Score=88.90  Aligned_cols=221  Identities=16%  Similarity=0.082  Sum_probs=148.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHC--CCeEEEecC---ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARF--GASVHTCGR---DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~--G~~v~~~~r---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +.|.++|||+.+.||...+..++..  .++.+.++.   ... ++.+ ++.. ...+..++..|+.+...+.-++..   
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l-~~~~-n~p~ykfv~~di~~~~~~~~~~~~---   78 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNL-EPVR-NSPNYKFVEGDIADADLVLYLFET---   78 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchh-hhhc-cCCCceEeeccccchHHHHhhhcc---
Confidence            4499999999999999999999886  344443322   111 2222 2221 246788999999999887777663   


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------  160 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------  160 (266)
                         .++|.|+|.|...+.......+.+    .+..|++++..++....-..   +..++|++|+...+.           
T Consensus        79 ---~~id~vihfaa~t~vd~s~~~~~~----~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~  148 (331)
T KOG0747|consen   79 ---EEIDTVIHFAAQTHVDRSFGDSFE----FTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEA  148 (331)
T ss_pred             ---CchhhhhhhHhhhhhhhhcCchHH----HhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCcccccccccc
Confidence               579999999998765443333444    48899999999988875332   345899999865432           


Q ss_pred             -CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC-------CCCCCC
Q 024551          161 -SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP-------LARSAE  232 (266)
Q Consensus       161 -~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~  232 (266)
                       ...+...|+++|+|.+++.+++...   +|+.|..+.-+.|..|..-+.--...+-.+.+.....+       .+.+..
T Consensus       149 s~~nPtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~  225 (331)
T KOG0747|consen  149 SLLNPTNPYAASKAAAEMLVRSYGRS---YGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLY  225 (331)
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHhhc---cCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEe
Confidence             1123578999999999999999877   56788888877777765433111111111122222223       345677


Q ss_pred             ccchHHHHHHHhcCCCCCccccEEEeC
Q 024551          233 PNEISPLVAFLCLPAASYITGQVISID  259 (266)
Q Consensus       233 ~~eia~~~~~l~s~~~~~~~G~~l~vd  259 (266)
                      .||+++++...+...   -.|+++++.
T Consensus       226 veD~~ea~~~v~~Kg---~~geIYNIg  249 (331)
T KOG0747|consen  226 VEDVSEAFKAVLEKG---ELGEIYNIG  249 (331)
T ss_pred             HHHHHHHHHHHHhcC---Cccceeecc
Confidence            899999999888552   268887764

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.11  E-value=2.8e-10  Score=94.01  Aligned_cols=217  Identities=17%  Similarity=0.087  Sum_probs=144.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHH--H--HHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMI--N--ERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~--~--~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+|++||||-+|-=|..+|+.|.++|+.|..+.|+...-  .  .+.+.-.....+++....|++|..++.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            369999999999999999999999999999888763321  1  111211223456889999999999999999876   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-----------CC
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-----------IS  161 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-----------~~  161 (266)
                         .+|-++|-++.++.+    .++++-+...+++-.|+.+++.++.-+=  .+.-++..-||+.-+           .|
T Consensus        78 ---~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TP  148 (345)
T COG1089          78 ---QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTP  148 (345)
T ss_pred             ---Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCC
Confidence               579999999877543    3445556679999999999988763221  112344444443221           24


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhc---cCCcEEEEEecCcccCCCCCCCccchhHH------HHHHHHhcCCCCCCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWA---TDSIRVNAVSPWAVNTQISPPDLNDLLVQ------EYVKLIAKTPLARSAE  232 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~  232 (266)
                      +.+..+|+++|..-..++..++..|+   -.||-+|.=+|.-=.|=.+++. ......      .-..+.+....+.|+.
T Consensus       149 FyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKI-t~ava~Ik~G~q~~l~lGNldAkRDWG~  227 (345)
T COG1089         149 FYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKI-TRAVARIKLGLQDKLYLGNLDAKRDWGH  227 (345)
T ss_pred             CCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHH-HHHHHHHHccccceEEeccccccccccc
Confidence            55678999999999999988877755   3466777666532111111110 000000      0001122234578899


Q ss_pred             ccchHHHHHHHhcC
Q 024551          233 PNEISPLVAFLCLP  246 (266)
Q Consensus       233 ~~eia~~~~~l~s~  246 (266)
                      +.|..++++.++..
T Consensus       228 A~DYVe~mwlmLQq  241 (345)
T COG1089         228 AKDYVEAMWLMLQQ  241 (345)
T ss_pred             hHHHHHHHHHHHcc
Confidence            99999999988863

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.05  E-value=7.5e-09  Score=98.78  Aligned_cols=142  Identities=15%  Similarity=0.113  Sum_probs=97.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ..+++|||||+|-||++++++|.++|+.|..                        ...|++|.+.+.+.+...      +
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~~------~  428 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRNV------K  428 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHhh------C
Confidence            3457999999999999999999999988731                        113677888777766542      5


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------C----
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------S----  161 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~----  161 (266)
                      +|+|||+|+....... +...++-++.+++|+.++.++++++.    +.+ -+++++||...+.           +    
T Consensus       429 pd~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~----~~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~  502 (668)
T PLN02260        429 PTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCR----ENG-LLMMNFATGCIFEYDAKHPEGSGIGFKEE  502 (668)
T ss_pred             CCEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHH----HcC-CeEEEEcccceecCCcccccccCCCCCcC
Confidence            8999999997542211 12234456789999999999999884    333 3566665543210           1    


Q ss_pred             ---CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEe
Q 024551          162 ---IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS  197 (266)
Q Consensus       162 ---~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~  197 (266)
                         .+....|+.||.+.+.+++.+..   ...+|+..+.
T Consensus       503 ~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        503 DKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence               12236899999999999987642   2335555444

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.95  E-value=3.7e-09  Score=87.34  Aligned_cols=200  Identities=19%  Similarity=0.177  Sum_probs=117.7

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNIL  100 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~l  100 (266)
                      ++|||||+-||++++.+|.+.|+.|++++|++...+....      ..+       .       ..+.+.+....++|++
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~------~~v-------~-------~~~~~~~~~~~~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH------PNV-------T-------LWEGLADALTLGIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC------ccc-------c-------ccchhhhcccCCCCEE
Confidence            5899999999999999999999999999999875431111      010       0       1111222211369999


Q ss_pred             EeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhh----HHHH
Q 024551          101 VNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAAS----KGAI  175 (266)
Q Consensus       101 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~s----K~al  175 (266)
                      ||-||..-.++-  ++.+.=+..++    |-+..++.+..++.+.. ..++..-+|..++++......|.-.    .-.+
T Consensus        61 INLAG~~I~~rr--Wt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl  134 (297)
T COG1090          61 INLAGEPIAERR--WTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL  134 (297)
T ss_pred             EECCCCcccccc--CCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence            999996533221  24444344443    55566666666666433 3344444566666655443333222    2245


Q ss_pred             HHHHHHHHHHh---ccCCcEEEEEecCcccCC---CCCCCccchhHHHHHHHHhcCCCC------CCCCccchHHHHHHH
Q 024551          176 NQLTKNLACEW---ATDSIRVNAVSPWAVNTQ---ISPPDLNDLLVQEYVKLIAKTPLA------RSAEPNEISPLVAFL  243 (266)
Q Consensus       176 ~~~~~~~a~el---~~~gi~v~~i~PG~v~t~---~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~eia~~~~~l  243 (266)
                      ..+++.|-.+.   ...|+||+.+.-|.|-.+   ++....+.      .+.....+++      -|...||..+++.|+
T Consensus       135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~------fk~glGG~~GsGrQ~~SWIhieD~v~~I~fl  208 (297)
T COG1090         135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPL------FKLGLGGKLGSGRQWFSWIHIEDLVNAILFL  208 (297)
T ss_pred             HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcch------hhhccCCccCCCCceeeeeeHHHHHHHHHHH
Confidence            55666664442   244899999999988763   22222111      1111112221      367789999999999


Q ss_pred             hcCCCCCcccc
Q 024551          244 CLPAASYITGQ  254 (266)
Q Consensus       244 ~s~~~~~~~G~  254 (266)
                      +..  ..++|-
T Consensus       209 l~~--~~lsGp  217 (297)
T COG1090         209 LEN--EQLSGP  217 (297)
T ss_pred             HhC--cCCCCc
Confidence            954  335553

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.95  E-value=3.3e-08  Score=81.91  Aligned_cols=207  Identities=16%  Similarity=0.112  Sum_probs=134.8

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+..++++++||||.|.||++++..|..+|+.|+.++.-........+.+.. ..++..+..|+..+     ++.     
T Consensus        22 ~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~-----   90 (350)
T KOG1429|consen   22 VKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK-----   90 (350)
T ss_pred             ccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH-----
Confidence            4667889999999999999999999999999999988755433332232211 23555666676654     333     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC------------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI------------  160 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~------------  160 (266)
                         .+|-++|-|...++-.+.--+    .+.+..|+.++...+..+    ++- +.|+++.|++.-+.            
T Consensus        91 ---evD~IyhLAapasp~~y~~np----vktIktN~igtln~lgla----krv-~aR~l~aSTseVYgdp~~hpq~e~yw  158 (350)
T KOG1429|consen   91 ---EVDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLA----KRV-GARFLLASTSEVYGDPLVHPQVETYW  158 (350)
T ss_pred             ---HhhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHH----HHh-CceEEEeecccccCCcccCCCccccc
Confidence               367777777765543332222    346999999999998877    232 46888888866432            


Q ss_pred             ----CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC---------C
Q 024551          161 ----SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP---------L  227 (266)
Q Consensus       161 ----~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~  227 (266)
                          +......|...|...+-|+..+.++   .||.|....+..+..|.+.-.-..-......+.....|         .
T Consensus       159 g~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qt  235 (350)
T KOG1429|consen  159 GNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQT  235 (350)
T ss_pred             cccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcce
Confidence                1123568999999999999988776   57777777776666554432211111111122222333         2


Q ss_pred             CCCCCccchHHHHHHHhc
Q 024551          228 ARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       228 ~~~~~~~eia~~~~~l~s  245 (266)
                      +.+...+|+.+.++.|..
T Consensus       236 RSF~yvsD~Vegll~Lm~  253 (350)
T KOG1429|consen  236 RSFQYVSDLVEGLLRLME  253 (350)
T ss_pred             EEEEeHHHHHHHHHHHhc
Confidence            455667888888888773

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.94  E-value=6.1e-08  Score=87.82  Aligned_cols=243  Identities=17%  Similarity=0.078  Sum_probs=155.2

Q ss_pred             ccccCCCCEEEEecCC-CchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHh----cCCeeEEEeccCCCHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGT-RGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWES----KGFKVTGSVCDLSFGDQREKL   85 (266)
Q Consensus        12 ~~~~~~~k~vlItGas-~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~i~~~   85 (266)
                      ....+.+|++|||||+ +.||.+++..|++.|++|+.+..+- +...+..+.|-.    .+..+.++++++.+..+++++
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            4456899999999998 5799999999999999999876543 333444554433    356788999999999999999


Q ss_pred             HHHHHhhcC-------------CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCe--
Q 024551           86 IETVSSVFD-------------GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NAS--  149 (266)
Q Consensus        86 ~~~~~~~~~-------------~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~--  149 (266)
                      ++++-+..-             -.+|.+|-.|.....+.+.+...+ -|-.+++-+++..+++-.+.++-...+ ..|  
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~h  548 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH  548 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence            999876421             137888888887766766665443 344455666666666555543322221 223  


Q ss_pred             EEEEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHh--ccCCcEEEEEecCcccC-CCCCCCccchhHHHHHHHHhcCC
Q 024551          150 IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW--ATDSIRVNAVSPWAVNT-QISPPDLNDLLVQEYVKLIAKTP  226 (266)
Q Consensus       150 iv~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el--~~~gi~v~~i~PG~v~t-~~~~~~~~~~~~~~~~~~~~~~~  226 (266)
                      ||.-.|. -..-+.+.+.|+-+|++++.++.-|..|-  +. .+.+..-.-||+.. .++..+   ...   .....+.-
T Consensus       549 VVLPgSP-NrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLMg~N---dii---v~aiEk~G  620 (866)
T COG4982         549 VVLPGSP-NRGMFGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLMGHN---DII---VAAIEKAG  620 (866)
T ss_pred             EEecCCC-CCCccCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeeccccccCCc---chh---HHHHHHhC
Confidence            3332322 12234456899999999999998887773  22 25566666688874 333322   111   11122222


Q ss_pred             CCCCCCccchHHHHHHHhcCCCC---CccccEEEeCCCccC
Q 024551          227 LARSAEPNEISPLVAFLCLPAAS---YITGQVISIDGGYTA  264 (266)
Q Consensus       227 ~~~~~~~~eia~~~~~l~s~~~~---~~~G~~l~vdgG~~~  264 (266)
                      . |.-+.+|+|.-++-||+.+..   .-+-....++||...
T Consensus       621 V-~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~  660 (866)
T COG4982         621 V-RTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGE  660 (866)
T ss_pred             c-eecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCcccc
Confidence            2 345689999999999875421   223445555666543

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.89  E-value=1e-08  Score=87.80  Aligned_cols=85  Identities=20%  Similarity=0.182  Sum_probs=68.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh---hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ---NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ..+++|+++|+|+ ||+|++++.+|++.|++ |++++|+.   ++.+++++++.+.+..+.+..+|+++.+++++.++  
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--
Confidence            3578999999999 69999999999999987 99999997   77888888886655566667789888777655433  


Q ss_pred             HhhcCCcccEEEeccccc
Q 024551           90 SSVFDGKLNILVNNAALV  107 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~  107 (266)
                            ..|+||||....
T Consensus       199 ------~~DilINaTp~G  210 (289)
T PRK12548        199 ------SSDILVNATLVG  210 (289)
T ss_pred             ------cCCEEEEeCCCC
Confidence                  469999998754

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.86  E-value=9.7e-09  Score=85.18  Aligned_cols=200  Identities=20%  Similarity=0.201  Sum_probs=119.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNIL  100 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~l  100 (266)
                      ++|+||+|.+|+.+++.|.+.+++|.++.|+.+  .+..++++..|  ++++.+|+.|++++.++++        .+|.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g--~~vv~~d~~~~~~l~~al~--------g~d~v   68 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALG--AEVVEADYDDPESLVAALK--------GVDAV   68 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTT--TEEEES-TT-HHHHHHHHT--------TCSEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhccc--ceEeecccCCHHHHHHHHc--------CCceE
Confidence            689999999999999999999999999999884  23445555554  4567999999999888877        48999


Q ss_pred             EeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC----CchhhhhhHHHHH
Q 024551          101 VNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP----RLSAYAASKGAIN  176 (266)
Q Consensus       101 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~----~~~~y~~sK~al~  176 (266)
                      |++.+....      ..          +.....+++++    ++.+-.++|+ ||........    +...+-..|..++
T Consensus        69 ~~~~~~~~~------~~----------~~~~~~li~Aa----~~agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie  127 (233)
T PF05368_consen   69 FSVTPPSHP------SE----------LEQQKNLIDAA----KAAGVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIE  127 (233)
T ss_dssp             EEESSCSCC------CH----------HHHHHHHHHHH----HHHT-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred             EeecCcchh------hh----------hhhhhhHHHhh----hccccceEEE-EEecccccccccccccchhhhhhhhhh
Confidence            998886431      11          11122333443    4445567775 4443333111    1122334566666


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHH-HHHhcCCCC---CC-CCccchHHHHHHHhcCCCCCc
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLA---RS-AEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~---~~-~~~~eia~~~~~l~s~~~~~~  251 (266)
                      .+.+.       .++....|.||+................... ......+..   .+ .+.+|+++.+..++.+...+-
T Consensus       128 ~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~  200 (233)
T PF05368_consen  128 EYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHN  200 (233)
T ss_dssp             HHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhc
Confidence            55543       3899999999987653322111000000000 000011111   23 267999999999998755554


Q ss_pred             cccEEEeCC
Q 024551          252 TGQVISIDG  260 (266)
Q Consensus       252 ~G~~l~vdg  260 (266)
                      .|..+.+-|
T Consensus       201 ~~~~~~~~~  209 (233)
T PF05368_consen  201 NGKTIFLAG  209 (233)
T ss_dssp             EEEEEEEGG
T ss_pred             CCEEEEeCC
Confidence            788888755

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.84  E-value=2.3e-08  Score=95.89  Aligned_cols=166  Identities=17%  Similarity=0.262  Sum_probs=141.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHH---HHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMI---NERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ..-..|..+|+||=+|+|..+|..|..+|++ +++++|+.-+.   ...+...++.|..+.+-..|++..+..+.++++.
T Consensus      1764 ~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s 1843 (2376)
T KOG1202|consen 1764 YCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEES 1843 (2376)
T ss_pred             hcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHh
Confidence            3345799999999999999999999999988 88999976443   2344555677888888889999999999999988


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      .+.  +++..++|-|.+...+-+++.+.+.|++.-+..+.++.++-+.-......  -..+|.+||.+.-++..+...|+
T Consensus      1844 ~kl--~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQtNYG 1919 (2376)
T KOG1202|consen 1844 NKL--GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQTNYG 1919 (2376)
T ss_pred             hhc--ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCcccccc
Confidence            776  68999999999999999999999999999999999999987766544433  35899999999999999999999


Q ss_pred             hhHHHHHHHHHHHH
Q 024551          170 ASKGAINQLTKNLA  183 (266)
Q Consensus       170 ~sK~al~~~~~~~a  183 (266)
                      -+.++++-++..-.
T Consensus      1920 ~aNS~MERiceqRr 1933 (2376)
T KOG1202|consen 1920 LANSAMERICEQRR 1933 (2376)
T ss_pred             hhhHHHHHHHHHhh
Confidence            99999999997543

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.79  E-value=2.3e-08  Score=88.94  Aligned_cols=81  Identities=23%  Similarity=0.335  Sum_probs=62.9

Q ss_pred             cCCCCEEEEecC---------------CCc-hHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC
Q 024551           15 SLRGMTALVTGG---------------TRG-IGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF   78 (266)
Q Consensus        15 ~~~~k~vlItGa---------------s~g-iG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~   78 (266)
                      +++||+++||||               |+| +|+++|++|+++|++|++++++.+ ++        ....  +..+|+++
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--------~~~~--~~~~dv~~  253 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--------TPAG--VKRIDVES  253 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--------CCCC--cEEEccCC
Confidence            579999999999               555 999999999999999999998753 11        0111  34679999


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecccccccc
Q 024551           79 GDQREKLIETVSSVFDGKLNILVNNAALVVMK  110 (266)
Q Consensus        79 ~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~  110 (266)
                      .+++.+.+.   +.+ +++|++|+|||+....
T Consensus       254 ~~~~~~~v~---~~~-~~~DilI~~Aav~d~~  281 (399)
T PRK05579        254 AQEMLDAVL---AAL-PQADIFIMAAAVADYR  281 (399)
T ss_pred             HHHHHHHHH---Hhc-CCCCEEEEcccccccc
Confidence            888777765   445 6799999999986443

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.75  E-value=1.2e-07  Score=76.58  Aligned_cols=85  Identities=26%  Similarity=0.254  Sum_probs=68.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|+++|+||++++|+++++.|+++|++|++++|+.++++++++.+.+.. ......+|..+.+++.+.+.      
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~------   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK------   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh------
Confidence            36889999999999999999999999999999999999999988888775321 23355678888888766554      


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                        ..|++|++....
T Consensus        97 --~~diVi~at~~g  108 (194)
T cd01078          97 --GADVVFAAGAAG  108 (194)
T ss_pred             --cCCEEEECCCCC
Confidence              368888876643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.72  E-value=7.2e-08  Score=79.73  Aligned_cols=109  Identities=16%  Similarity=0.117  Sum_probs=72.7

Q ss_pred             CCccccCCCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRG-IGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~g-iG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ..++...=+.+-.||+.|+| +|+++|++|+++|++|++++|+....       ......+.++.++     +.+++.+.
T Consensus         7 ~G~T~e~iD~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-------~~~~~~v~~i~v~-----s~~~m~~~   74 (229)
T PRK06732          7 SGGTTEPIDSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-------PEPHPNLSIIEIE-----NVDDLLET   74 (229)
T ss_pred             CCCcccccCCceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-------CCCCCCeEEEEEe-----cHHHHHHH
Confidence            34444444557788987766 99999999999999999988764210       0011244555432     23333444


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhH
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS  131 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  131 (266)
                      +.+.+ +.+|++|||||+....+....+.++|.+++++|....
T Consensus        75 l~~~~-~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         75 LEPLV-KDHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             HHHHh-cCCCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            44444 5689999999987655666677888988888876554

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.58  E-value=2.1e-07  Score=82.61  Aligned_cols=110  Identities=18%  Similarity=0.276  Sum_probs=77.1

Q ss_pred             cCCCCEEEEecC---------------CCc-hHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC
Q 024551           15 SLRGMTALVTGG---------------TRG-IGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF   78 (266)
Q Consensus        15 ~~~~k~vlItGa---------------s~g-iG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~   78 (266)
                      +++||+++||||               ||| +|.++|++|.++|++|+++.++....         ....  ...+|+++
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~~--~~~~~v~~  250 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPPG--VKSIKVST  250 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCCC--cEEEEecc
Confidence            488999999999               667 99999999999999999888765321         1112  24579999


Q ss_pred             HHHH-HHHHHHHHhhcCCcccEEEeccccccccCCCCC--CHHHHHHHhccchhhHHHHHHHHH
Q 024551           79 GDQR-EKLIETVSSVFDGKLNILVNNAALVVMKRATEY--TLEEYSSVMSTNVESSYHLCQLAH  139 (266)
Q Consensus        79 ~~~i-~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~  139 (266)
                      .+++ ++++++.   + +.+|++|+|||+....+....  ..+...+.+.+|+...--+++.+.
T Consensus       251 ~~~~~~~~~~~~---~-~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       251 AEEMLEAALNEL---A-KDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             HHHHHHHHHHhh---c-ccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence            9888 5555443   3 579999999998755443221  111112346678888777776664

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.54  E-value=7e-06  Score=69.33  Aligned_cols=193  Identities=18%  Similarity=0.131  Sum_probs=119.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +.++|||||+.+|++++++|.++|+.|....|+++......       ..+.+...|+.++.++...++       | +|
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G-~~   65 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------G-VD   65 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------c-cc
Confidence            46899999999999999999999999999999998776554       467888999999999888776       3 78


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      .+++..+... +...         .............+...     .+...++.+|...+..  .....|..+|...+..
T Consensus        66 ~~~~i~~~~~-~~~~---------~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~  128 (275)
T COG0702          66 GVLLISGLLD-GSDA---------FRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA  128 (275)
T ss_pred             EEEEEecccc-cccc---------hhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence            8888777543 2111         12222333333333321     2234667776665443  3457889999998888


Q ss_pred             HHHHHHHhccCCcEEEEEe-cCcccCCCCCCCccchhHHHHHHHHhc---C--CCC--CCCCccchHHHHHHHhcCCCCC
Q 024551          179 TKNLACEWATDSIRVNAVS-PWAVNTQISPPDLNDLLVQEYVKLIAK---T--PLA--RSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~-PG~v~t~~~~~~~~~~~~~~~~~~~~~---~--~~~--~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      .++.       |+.-..+. |+++.......      ..  ......   .  +..  .....+|++..+...+....  
T Consensus       129 l~~s-------g~~~t~lr~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--  191 (275)
T COG0702         129 LRSS-------GIPYTTLRRAAFYLGAGAAF------IE--AAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--  191 (275)
T ss_pred             HHhc-------CCCeEEEecCeeeeccchhH------HH--HHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--
Confidence            7754       45433333 34433211100      00  011111   1  111  23556888888877775433  


Q ss_pred             ccccEEEeCC
Q 024551          251 ITGQVISIDG  260 (266)
Q Consensus       251 ~~G~~l~vdg  260 (266)
                      ..|+.+.+-|
T Consensus       192 ~~~~~~~l~g  201 (275)
T COG0702         192 TAGRTYELAG  201 (275)
T ss_pred             ccCcEEEccC
Confidence            4556555544

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.50  E-value=1.5e-06  Score=77.87  Aligned_cols=176  Identities=19%  Similarity=0.209  Sum_probs=113.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCC---CeEEEecCCh---hHHHHHH--------HHHHhc----CCeeEEEecc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFG---ASVHTCGRDQ---NMINERI--------QEWESK----GFKVTGSVCD   75 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G---~~v~~~~r~~---~~~~~~~--------~~l~~~----~~~~~~~~~D   75 (266)
                      ..++||+++||||||.+|+-+...|.+.-   -++.+.-|.+   +.-+.+.        +.+.+.    -.++..+..|
T Consensus         8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD   87 (467)
T KOG1221|consen    8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD   87 (467)
T ss_pred             HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence            34799999999999999999999998753   2456665532   1111121        222222    2467778888


Q ss_pred             CCCHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEec
Q 024551           76 LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSS  155 (266)
Q Consensus        76 ~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss  155 (266)
                      +++++---+--+.. ... ..+|++||+|+....       .|.++..+.+|..|+..+++.+....+-   ...|++|+
T Consensus        88 i~~~~LGis~~D~~-~l~-~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~l---~~~vhVST  155 (467)
T KOG1221|consen   88 ISEPDLGISESDLR-TLA-DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVKL---KALVHVST  155 (467)
T ss_pred             ccCcccCCChHHHH-HHH-hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhhh---heEEEeeh
Confidence            88764211111111 111 469999999997532       3557788999999999999987554432   37888888


Q ss_pred             CCCCCC--------CC--------------------------------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEE
Q 024551          156 VAGAIS--------IP--------------------------------RLSAYAASKGAINQLTKNLACEWATDSIRVNA  195 (266)
Q Consensus       156 ~~~~~~--------~~--------------------------------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~  195 (266)
                      ......        ++                                .-..|.-+|+-.+++...-+     .+.-+..
T Consensus       156 Ay~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~~lPivI  230 (467)
T KOG1221|consen  156 AYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----ENLPLVI  230 (467)
T ss_pred             hheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----cCCCeEE
Confidence            765421        00                                12368888888888776543     3477778


Q ss_pred             EecCcccCCCC
Q 024551          196 VSPWAVNTQIS  206 (266)
Q Consensus       196 i~PG~v~t~~~  206 (266)
                      +.|..|.+...
T Consensus       231 iRPsiI~st~~  241 (467)
T KOG1221|consen  231 IRPSIITSTYK  241 (467)
T ss_pred             EcCCceecccc
Confidence            88877766443

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.46  E-value=3.7e-06  Score=74.27  Aligned_cols=173  Identities=16%  Similarity=0.145  Sum_probs=109.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .+-.+|+|+||+|++|+-+++.|.++|+.|....|+.+..+++.. +.........+..|...+.++...+.+...   .
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~---~  152 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVEAVP---K  152 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhhhcc---c
Confidence            456899999999999999999999999999999999988877666 111112333444555544443333322211   2


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ...+++-++|.-....       +......+.+.+..++++++    +..+-.++|+++++.+....+....+.. -...
T Consensus       153 ~~~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~~-~~~~  220 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILLL-NGLV  220 (411)
T ss_pred             cceeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhhh-hhhh
Confidence            2567777777543221       22233457777788887777    4555669999999887665554444442 1111


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCC
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQ  204 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~  204 (266)
                      .-.=+...+.+...|+.-..|.||....+
T Consensus       221 ~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  221 LKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             hHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence            11113334456677888888999876653

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.45  E-value=3.6e-06  Score=70.07  Aligned_cols=211  Identities=17%  Similarity=0.217  Sum_probs=135.6

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .+.++.|-++-|.|||+.+|+.++.+|++.|-+|++-.|-.+.--...+.+.+. +.+.+...|+.|+++|+++++.   
T Consensus        55 GRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL-GQvl~~~fd~~DedSIr~vvk~---  130 (391)
T KOG2865|consen   55 GRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL-GQVLFMKFDLRDEDSIRAVVKH---  130 (391)
T ss_pred             CcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc-cceeeeccCCCCHHHHHHHHHh---
Confidence            345677889999999999999999999999999999888543211111222222 4788999999999999999883   


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                           -+++||..|.-.+..  +.+.      -++|+.++-.+++.+    ++.+--++|.+|+..+.  ...-.-|--+
T Consensus       131 -----sNVVINLIGrd~eTk--nf~f------~Dvn~~~aerlAric----ke~GVerfIhvS~Lgan--v~s~Sr~Lrs  191 (391)
T KOG2865|consen  131 -----SNVVINLIGRDYETK--NFSF------EDVNVHIAERLARIC----KEAGVERFIHVSCLGAN--VKSPSRMLRS  191 (391)
T ss_pred             -----CcEEEEeeccccccC--Cccc------ccccchHHHHHHHHH----HhhChhheeehhhcccc--ccChHHHHHh
Confidence                 489999999643321  1222      357777777777666    66666799999988744  3334556667


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh---cCCCCC--------CCCccchHHHH
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA---KTPLAR--------SAEPNEISPLV  240 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~eia~~~  240 (266)
                      |++-+--+|.   ++.    ....|.|.-|...      ++...+-|..++.   ..|+..        ....-|+|++|
T Consensus       192 K~~gE~aVrd---afP----eAtIirPa~iyG~------eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~I  258 (391)
T KOG2865|consen  192 KAAGEEAVRD---AFP----EATIIRPADIYGT------EDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAI  258 (391)
T ss_pred             hhhhHHHHHh---hCC----cceeechhhhccc------chhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHH
Confidence            7766655542   222    2234455444321      1223333333333   233322        23457899999


Q ss_pred             HHHhcCCCCCccccEEEeCC
Q 024551          241 AFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       241 ~~l~s~~~~~~~G~~l~vdg  260 (266)
                      +-.+.|.+  -.|.++.+-|
T Consensus       259 vnAvkDp~--s~Gktye~vG  276 (391)
T KOG2865|consen  259 VNAVKDPD--SMGKTYEFVG  276 (391)
T ss_pred             HHhccCcc--ccCceeeecC
Confidence            88886653  4677666543

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.44  E-value=6.7e-06  Score=66.29  Aligned_cols=202  Identities=21%  Similarity=0.184  Sum_probs=117.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC---eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~---~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      |+++|||+++-+|+||.+.+.++|.   +.++.+..                     .+|+++.++.+++++..      
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~e------   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESE------   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhcc------
Confidence            6899999999999999999999886   34443321                     37999999999999864      


Q ss_pred             cccEEEecccc-ccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC--------------
Q 024551           96 KLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI--------------  160 (266)
Q Consensus        96 ~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~--------------  160 (266)
                      ++-++||.|.- .....-.....+-    +..|+.-.-++++.+.    ..+-.++|...|..-+-              
T Consensus        55 kPthVIhlAAmVGGlf~N~~ynldF----~r~Nl~indNVlhsa~----e~gv~K~vsclStCIfPdkt~yPIdEtmvh~  126 (315)
T KOG1431|consen   55 KPTHVIHLAAMVGGLFHNNTYNLDF----IRKNLQINDNVLHSAH----EHGVKKVVSCLSTCIFPDKTSYPIDETMVHN  126 (315)
T ss_pred             CCceeeehHhhhcchhhcCCCchHH----HhhcceechhHHHHHH----HhchhhhhhhcceeecCCCCCCCCCHHHhcc
Confidence            45666776642 2111111123333    4444444445555553    23333455444432111              


Q ss_pred             --CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCC---C---CccchhHHHHHHH----------H
Q 024551          161 --SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP---P---DLNDLLVQEYVKL----------I  222 (266)
Q Consensus       161 --~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~---~---~~~~~~~~~~~~~----------~  222 (266)
                        +-|....|+.+|..+.-..+.++.+++.   ...++.|-.+-.|.-.   +   ..+.......+..          .
T Consensus       127 gpphpsN~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwG  203 (315)
T KOG1431|consen  127 GPPHPSNFGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWG  203 (315)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEec
Confidence              1123468999998888888988888554   4445555444333211   1   1111111111111          2


Q ss_pred             hcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCC
Q 024551          223 AKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       223 ~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      ...|++.+....|+|++++|++.+   |-.=+.|.+..|
T Consensus       204 sG~PlRqFiys~DLA~l~i~vlr~---Y~~vEpiils~g  239 (315)
T KOG1431|consen  204 SGSPLRQFIYSDDLADLFIWVLRE---YEGVEPIILSVG  239 (315)
T ss_pred             CCChHHHHhhHhHHHHHHHHHHHh---hcCccceEeccC
Confidence            236888899999999999999953   233344444433

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.38  E-value=3.2e-05  Score=60.50  Aligned_cols=150  Identities=17%  Similarity=0.082  Sum_probs=103.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +.+.|.|||+-.|..|+++..++|+.|..+.|++.++.+.        ..+.+++.|+.|++++.+.+.        ..|
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~--------g~D   64 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA--------GHD   64 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc--------CCc
Confidence            3578999999999999999999999999999999876533        256688999999999755544        479


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC----------chhh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR----------LSAY  168 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~----------~~~y  168 (266)
                      ++|..-|....+.     .+...+           ..+.++..++..+..|++.|+..++..-.++          -..|
T Consensus        65 aVIsA~~~~~~~~-----~~~~~k-----------~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~  128 (211)
T COG2910          65 AVISAFGAGASDN-----DELHSK-----------SIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK  128 (211)
T ss_pred             eEEEeccCCCCCh-----hHHHHH-----------HHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence            9999888654321     111111           1455566667767789999998887653322          1234


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQ  204 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~  204 (266)
                      ..+++.-+.| +.|..+   +++...-++|-..-.|
T Consensus       129 ~~A~~~ae~L-~~Lr~~---~~l~WTfvSPaa~f~P  160 (211)
T COG2910         129 PEALAQAEFL-DSLRAE---KSLDWTFVSPAAFFEP  160 (211)
T ss_pred             HHHHHHHHHH-HHHhhc---cCcceEEeCcHHhcCC
Confidence            4444444333 334333   4478888899866655

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.36  E-value=3e-06  Score=64.28  Aligned_cols=78  Identities=21%  Similarity=0.333  Sum_probs=59.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++|.|+ ||.|++++.+|+++|++ |.++.|+.++.+++++.+..  ..+.++  ++.+..   +..       
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~--~~~~~~--~~~~~~---~~~-------   73 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG--VNIEAI--PLEDLE---EAL-------   73 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG--CSEEEE--EGGGHC---HHH-------
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc--ccccee--eHHHHH---HHH-------
Confidence            689999999998 89999999999999988 99999999999999998822  233333  333322   111       


Q ss_pred             CCcccEEEecccccc
Q 024551           94 DGKLNILVNNAALVV  108 (266)
Q Consensus        94 ~~~id~lv~~ag~~~  108 (266)
                       ...|++|++.+...
T Consensus        74 -~~~DivI~aT~~~~   87 (135)
T PF01488_consen   74 -QEADIVINATPSGM   87 (135)
T ss_dssp             -HTESEEEE-SSTTS
T ss_pred             -hhCCeEEEecCCCC
Confidence             35899999988653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.30  E-value=3.6e-06  Score=74.15  Aligned_cols=77  Identities=26%  Similarity=0.334  Sum_probs=67.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +++||.|| |++|+.+|..|+++| .+|.+.+|+.+.++++.+..   +.++.+.++|+.|.+.+.++++       + .
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~-------~-~   69 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK-------D-F   69 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh-------c-C
Confidence            57899999 999999999999999 89999999999888776654   3489999999999999888887       3 3


Q ss_pred             cEEEeccccc
Q 024551           98 NILVNNAALV  107 (266)
Q Consensus        98 d~lv~~ag~~  107 (266)
                      |++||+++..
T Consensus        70 d~VIn~~p~~   79 (389)
T COG1748          70 DLVINAAPPF   79 (389)
T ss_pred             CEEEEeCCch
Confidence            9999999865

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.24  E-value=6.3e-06  Score=75.10  Aligned_cols=77  Identities=19%  Similarity=0.336  Sum_probs=60.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++...+  +.++..|..+.            ..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~------------~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEE------------FL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchh------------Hh
Confidence            57899999999888 99999999999999999999975 44555556665444  44667777751            12


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                       +.+|++|+++|..
T Consensus        67 -~~~d~vv~~~g~~   79 (450)
T PRK14106         67 -EGVDLVVVSPGVP   79 (450)
T ss_pred             -hcCCEEEECCCCC
Confidence             4689999999974

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.17  E-value=8.5e-06  Score=72.80  Aligned_cols=76  Identities=24%  Similarity=0.304  Sum_probs=60.6

Q ss_pred             EEEecCCCchHHHHHHHHHHCC-C-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           21 ALVTGGTRGIGYAIVEELARFG-A-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G-~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+|.|+ |.+|+.+++.|++++ . +|++.+|+.++++++.+.+  .+.++.+.++|+.|.+++.++++        ..|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~--------~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR--------GCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT--------TSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh--------cCC
Confidence            689999 999999999999997 4 7999999999998888766  45689999999999999888876        359


Q ss_pred             EEEeccccc
Q 024551           99 ILVNNAALV  107 (266)
Q Consensus        99 ~lv~~ag~~  107 (266)
                      ++||++|..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999999965

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN00106 malate dehydrogenase

Probab=98.09  E-value=2.2e-05  Score=68.09  Aligned_cols=163  Identities=12%  Similarity=0.054  Sum_probs=100.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ..+++.|+|++|.+|..++..|+.++.  .++++++++  .+..+-+|.+.....  ...++++.+++...+        
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l--------   84 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPA--QVRGFLGDDQLGDAL--------   84 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCc--eEEEEeCCCCHHHHc--------
Confidence            457899999999999999999998774  699999877  222222333322221  122333333332222        


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEE-EecCCC----C--------CC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVF-MSSVAG----A--------IS  161 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~-vss~~~----~--------~~  161 (266)
                      ...|++|+.||....      +.+.+.+.+..|+.....+.+    .+.+....+|++ +|....    .        .+
T Consensus        85 ~~aDiVVitAG~~~~------~g~~R~dll~~N~~i~~~i~~----~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~  154 (323)
T PLN00106         85 KGADLVIIPAGVPRK------PGMTRDDLFNINAGIVKTLCE----AVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGV  154 (323)
T ss_pred             CCCCEEEEeCCCCCC------CCCCHHHHHHHHHHHHHHHHH----HHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCC
Confidence            358999999997543      123366678888777655544    445554444555 444442    1        24


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcc
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAV  201 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v  201 (266)
                      +|....|+.++.--..|-..++.++.-.-..|.+..-|-.
T Consensus       155 ~p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~ViGeH  194 (323)
T PLN00106        155 YDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVVGGH  194 (323)
T ss_pred             CCcceEEEEecchHHHHHHHHHHHhCCChhheEEEEEEeC
Confidence            5667788888877777888888887744334444444443

>PRK09620 hypothetical protein; Provisional

Probab=98.03  E-value=8.2e-06  Score=67.38  Aligned_cols=84  Identities=19%  Similarity=0.146  Sum_probs=52.0

Q ss_pred             CCCCEEEEecCC----------------CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH
Q 024551           16 LRGMTALVTGGT----------------RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG   79 (266)
Q Consensus        16 ~~~k~vlItGas----------------~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~   79 (266)
                      ++||+||||+|.                |-+|.++|++|.++|+.|+++++......   ..+. .......+..|    
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~---~~~~-~~~~~~~V~s~----   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKP---NDIN-NQLELHPFEGI----   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCC---cccC-CceeEEEEecH----
Confidence            479999999885                89999999999999999998775321100   0000 01223333332    


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccccccc
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAALVVM  109 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag~~~~  109 (266)
                      .++...+.++.+.  ..+|++||+|++...
T Consensus        73 ~d~~~~l~~~~~~--~~~D~VIH~AAvsD~  100 (229)
T PRK09620         73 IDLQDKMKSIITH--EKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHHHHHhcc--cCCCEEEECccccce
Confidence            2222233333322  258999999998643

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.03  E-value=3.6e-05  Score=67.03  Aligned_cols=74  Identities=26%  Similarity=0.259  Sum_probs=56.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHC-C-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARF-G-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~-G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ++++|+++||||+|.||+.++++|+++ | .+++++.|+.++++++.+++..         .|+.   ++.       +.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~~  212 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------EA  212 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------HH
Confidence            689999999999999999999999864 5 5799999999888877776531         1221   121       22


Q ss_pred             cCCcccEEEecccccc
Q 024551           93 FDGKLNILVNNAALVV  108 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~  108 (266)
                      + ...|++|++++...
T Consensus       213 l-~~aDiVv~~ts~~~  227 (340)
T PRK14982        213 L-PEADIVVWVASMPK  227 (340)
T ss_pred             H-ccCCEEEECCcCCc
Confidence            2 35899999998653

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.01  E-value=8.8e-06  Score=66.46  Aligned_cols=218  Identities=21%  Similarity=0.127  Sum_probs=129.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHH-HHHHHHHHh-----cCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMI-NERIQEWES-----KGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~-~~~~~~l~~-----~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .|++||||=++-=|..++.-|+.+|+.|..+-|+...- ...++.|-.     .++.....-.|++|...+.++++.+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            45999999999999999999999999999766643322 122233322     2455666679999999999999876  


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC--C---------CC
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA--G---------AI  160 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~--~---------~~  160 (266)
                          +++=+.|.|...+..-..++    -+-.-++...|+++++.+....-... .-++---|+..  +         ..
T Consensus       106 ----kPtEiYnLaAQSHVkvSFdl----peYTAeVdavGtLRlLdAi~~c~l~~-~VrfYQAstSElyGkv~e~PQsE~T  176 (376)
T KOG1372|consen  106 ----KPTEVYNLAAQSHVKVSFDL----PEYTAEVDAVGTLRLLDAIRACRLTE-KVRFYQASTSELYGKVQEIPQSETT  176 (376)
T ss_pred             ----CchhhhhhhhhcceEEEeec----ccceeeccchhhhhHHHHHHhcCccc-ceeEEecccHhhcccccCCCcccCC
Confidence                35667777877654322222    23346788889999877764332111 11222222211  1         12


Q ss_pred             CCCCchhhhhhHHHHHHHHHHHHHH---hccCCcEEEEEecCcccC----CCCCCCccchh-HHHHHHHHhcCCCCCCCC
Q 024551          161 SIPRLSAYAASKGAINQLTKNLACE---WATDSIRVNAVSPWAVNT----QISPPDLNDLL-VQEYVKLIAKTPLARSAE  232 (266)
Q Consensus       161 ~~~~~~~y~~sK~al~~~~~~~a~e---l~~~gi~v~~i~PG~v~t----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  232 (266)
                      |+.+..+|+++|.+-..++-.++..   ++-.||-+|.-+|.-=.+    .+++....... .++...+.+...++.|+-
T Consensus       177 PFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGh  256 (376)
T KOG1372|consen  177 PFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGH  256 (376)
T ss_pred             CCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccch
Confidence            4456789999998865555444433   334577777766642111    11111000000 000011233345678888


Q ss_pred             ccchHHHHHHHhcC
Q 024551          233 PNEISPLVAFLCLP  246 (266)
Q Consensus       233 ~~eia~~~~~l~s~  246 (266)
                      +.|-.++++.++..
T Consensus       257 A~dYVEAMW~mLQ~  270 (376)
T KOG1372|consen  257 AGDYVEAMWLMLQQ  270 (376)
T ss_pred             hHHHHHHHHHHHhc
Confidence            99999998888853

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.98  E-value=3.4e-05  Score=66.17  Aligned_cols=80  Identities=19%  Similarity=0.223  Sum_probs=69.3

Q ss_pred             EEEEecCCCchHHHHHHHHHH----CCCeEEEecCChhHHHHHHHHHHhcCC----eeEEEeccCCCHHHHHHHHHHHHh
Q 024551           20 TALVTGGTRGIGYAIVEELAR----FGASVHTCGRDQNMINERIQEWESKGF----KVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~----~G~~v~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      -++|.|||+-.|.-++.++.+    .|..+.+.+||++++++..+.+.+..+    ...++.||.+|++++.+++.+   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            478999999999999999999    788999999999999999998876642    233888999999999988873   


Q ss_pred             hcCCcccEEEeccccc
Q 024551           92 VFDGKLNILVNNAALV  107 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~  107 (266)
                           ..+++||+|.+
T Consensus        84 -----~~vivN~vGPy   94 (423)
T KOG2733|consen   84 -----ARVIVNCVGPY   94 (423)
T ss_pred             -----hEEEEeccccc
Confidence                 57999999965

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.97  E-value=0.00021  Score=61.42  Aligned_cols=80  Identities=20%  Similarity=0.274  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+++++|.++++.+...|.+|+.++++++..+.+. .   .+.+.   .+|..+.+..+.+.+.. .  +..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~---~~~~~~~~~~~~~~~~~-~--~~~  213 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-Q---AGADA---VFNYRAEDLADRILAAT-A--GQG  213 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCCE---EEeCCCcCHHHHHHHHc-C--CCc
Confidence            5899999999999999999999999999999999887665542 2   23221   13444444444433322 1  136


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|.+++++|.
T Consensus       214 ~d~vi~~~~~  223 (325)
T cd08253         214 VDVIIEVLAN  223 (325)
T ss_pred             eEEEEECCch
Confidence            9999999873

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.96  E-value=6.8e-05  Score=68.30  Aligned_cols=81  Identities=22%  Similarity=0.286  Sum_probs=56.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |+++||+++|||+++ +|.++|+.|+++|++|++.+++........+++.+.+.++.  ..+  +..++   .+      
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~--~~~--~~~~~---~~------   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI--CGS--HPLEL---LD------   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE--eCC--CCHHH---hc------
Confidence            357899999999986 99999999999999999999876554455566655544332  111  11211   11      


Q ss_pred             CCcccEEEeccccccc
Q 024551           94 DGKLNILVNNAALVVM  109 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~  109 (266)
                       ..+|++|+++|+...
T Consensus        67 -~~~d~vV~s~gi~~~   81 (447)
T PRK02472         67 -EDFDLMVKNPGIPYT   81 (447)
T ss_pred             -CcCCEEEECCCCCCC
Confidence             248999999998643

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.96  E-value=4.6e-05  Score=59.23  Aligned_cols=160  Identities=17%  Similarity=0.113  Sum_probs=102.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +.++++.++|.|||+-.|..+.+++++.+  .+|+++.|++..-.       +.+..+.....|.+..++....+     
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~-------at~k~v~q~~vDf~Kl~~~a~~~-----   81 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP-------ATDKVVAQVEVDFSKLSQLATNE-----   81 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc-------cccceeeeEEechHHHHHHHhhh-----
Confidence            66889999999999999999999999998  45888888742111       11234555566766554433222     


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                         ..+|+++++-|...-..-       .+..+.+.---.+.+++++    ++++...++.+||.++....  ...|--.
T Consensus        82 ---qg~dV~FcaLgTTRgkaG-------adgfykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~sS--rFlY~k~  145 (238)
T KOG4039|consen   82 ---QGPDVLFCALGTTRGKAG-------ADGFYKVDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPSS--RFLYMKM  145 (238)
T ss_pred             ---cCCceEEEeecccccccc-------cCceEeechHHHHHHHHHH----HhCCCeEEEEEeccCCCccc--ceeeeec
Confidence               348999999886532110       1111222222223344443    56667899999998877554  4567778


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP  207 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~  207 (266)
                      |.-++.=+-.+--      =++..+.||++..+...
T Consensus       146 KGEvE~~v~eL~F------~~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  146 KGEVERDVIELDF------KHIIILRPGPLLGERTE  175 (238)
T ss_pred             cchhhhhhhhccc------cEEEEecCcceeccccc
Confidence            8877765543322      27788899999765443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.89  E-value=9e-05  Score=57.26  Aligned_cols=77  Identities=17%  Similarity=0.289  Sum_probs=57.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++++++|+|+ +++|+++++.|.+.| .+|.+++|++++.+++++++....     +..+..+.++.          .
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~   79 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L   79 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c
Confidence            467899999998 899999999999996 789999999998888877764321     12333443332          1


Q ss_pred             CCcccEEEecccccc
Q 024551           94 DGKLNILVNNAALVV  108 (266)
Q Consensus        94 ~~~id~lv~~ag~~~  108 (266)
                       ...|++|++.+...
T Consensus        80 -~~~Dvvi~~~~~~~   93 (155)
T cd01065          80 -AEADLIINTTPVGM   93 (155)
T ss_pred             -ccCCEEEeCcCCCC
Confidence             46899999998653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.85  E-value=7e-05  Score=64.95  Aligned_cols=150  Identities=15%  Similarity=0.065  Sum_probs=90.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+.+++.|+|++|.+|..++..|+.++  ..+++++++.  .+..+-++.+....  ....+.+|+.+..+.+       
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~~--~~v~~~td~~~~~~~l-------   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDTP--AKVTGYADGELWEKAL-------   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCcC--ceEEEecCCCchHHHh-------
Confidence            355689999999999999999999766  5699999832  22222233332222  2234555544432222       


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC-------------CC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG-------------AI  160 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~-------------~~  160 (266)
                       ...|++|+++|....      +.+.+.+.+..|+...-.+    .+.|++.+..++|+++|-..             ..
T Consensus        75 -~gaDvVVitaG~~~~------~~~tR~dll~~N~~i~~~i----~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~s  143 (321)
T PTZ00325         75 -RGADLVLICAGVPRK------PGMTRDDLFNTNAPIVRDL----VAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAG  143 (321)
T ss_pred             -CCCCEEEECCCCCCC------CCCCHHHHHHHHHHHHHHH----HHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhcc
Confidence             348999999997532      1123566788887666666    55556666667887777332             23


Q ss_pred             CCCCchhhhhhHHHHHHHHHHHHHHhc
Q 024551          161 SIPRLSAYAASKGAINQLTKNLACEWA  187 (266)
Q Consensus       161 ~~~~~~~y~~sK~al~~~~~~~a~el~  187 (266)
                      ++|....|+.+-.=-.-|-..++..+.
T Consensus       144 g~p~~~viG~g~LDs~R~r~~la~~l~  170 (321)
T PTZ00325        144 VYDPRKLFGVTTLDVVRARKFVAEALG  170 (321)
T ss_pred             CCChhheeechhHHHHHHHHHHHHHhC
Confidence            455566777762222234445555544

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.83  E-value=0.00015  Score=61.51  Aligned_cols=76  Identities=16%  Similarity=0.266  Sum_probs=57.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ..++|+++|+|+ +|+|++++..|++.|++|.+++|+.++.+++++++...+ .+.....|     +   .      .. 
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~~~~-----~---~------~~-  176 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAFSMD-----E---L------PL-  176 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEechh-----h---h------cc-
Confidence            356899999999 699999999999999999999999999988888876533 22221111     1   0      11 


Q ss_pred             CcccEEEeccccc
Q 024551           95 GKLNILVNNAALV  107 (266)
Q Consensus        95 ~~id~lv~~ag~~  107 (266)
                      ...|++|++.+..
T Consensus       177 ~~~DivInatp~g  189 (270)
T TIGR00507       177 HRVDLIINATSAG  189 (270)
T ss_pred             cCccEEEECCCCC
Confidence            3589999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.81  E-value=0.00041  Score=56.52  Aligned_cols=219  Identities=13%  Similarity=0.132  Sum_probs=128.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHC-CCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARF-GAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~-G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .-+...+||||+-+-+|..+|..|-.+ |-. |++.+..+..     +..-+.|   -++-.|+.|..++++++-     
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-----~~V~~~G---PyIy~DILD~K~L~eIVV-----  107 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-----ANVTDVG---PYIYLDILDQKSLEEIVV-----  107 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-----hhhcccC---CchhhhhhccccHHHhhc-----
Confidence            445679999999999999999998775 544 6655543322     1111122   245579999888887765     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC---------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP---------  163 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~---------  163 (266)
                       ..+||-+||-....+.-..     ....-..++|+.|..++++.+    .+.+ -++..-|.+++..+..         
T Consensus       108 -n~RIdWL~HfSALLSAvGE-----~NVpLA~~VNI~GvHNil~vA----a~~k-L~iFVPSTIGAFGPtSPRNPTPdlt  176 (366)
T KOG2774|consen  108 -NKRIDWLVHFSALLSAVGE-----TNVPLALQVNIRGVHNILQVA----AKHK-LKVFVPSTIGAFGPTSPRNPTPDLT  176 (366)
T ss_pred             -ccccceeeeHHHHHHHhcc-----cCCceeeeecchhhhHHHHHH----HHcC-eeEeecccccccCCCCCCCCCCCee
Confidence             2689999998775432111     223334899999999998887    3332 3444344455443321         


Q ss_pred             ---CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEE-ecCcccCCCCCCCccchhHHHHHHH----HhcCCCC---CC--
Q 024551          164 ---RLSAYAASKGAINQLTKNLACEWATDSIRVNAV-SPWAVNTQISPPDLNDLLVQEYVKL----IAKTPLA---RS--  230 (266)
Q Consensus       164 ---~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i-~PG~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~---~~--  230 (266)
                         +...|++||.-.+-+-+.+.-.   .|+.+.++ .||.+...--.....+.....+...    .-.++++   |+  
T Consensus       177 IQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpm  253 (366)
T KOG2774|consen  177 IQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPM  253 (366)
T ss_pred             eecCceeechhHHHHHHHHHHHHhh---cCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCce
Confidence               3468999999888887776544   45555444 5776654211111111111111111    1123333   22  


Q ss_pred             CCccchHHHHHHHhcCCCCCccccEEEeCC
Q 024551          231 AEPNEISPLVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      ...+|+-..++.++......+.-.+++|.|
T Consensus       254 my~~dc~~~~~~~~~a~~~~lkrr~ynvt~  283 (366)
T KOG2774|consen  254 MYDTDCMASVIQLLAADSQSLKRRTYNVTG  283 (366)
T ss_pred             eehHHHHHHHHHHHhCCHHHhhhheeeece
Confidence            335788777776665555556666666654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.76  E-value=0.00036  Score=74.92  Aligned_cols=179  Identities=16%  Similarity=0.146  Sum_probs=115.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+.++.++|+...++++.+++.+|.++|++|+.+..... .   .+........+..+.+.--|..++..+++.+.... 
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1826 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-V---SHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKT- 1826 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-c---cccccccccccccccccccchHHHHHHHHhhhccc-
Confidence            345888999988999999999999999999887642211 0   00000011122233455556677888888876665 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY------  168 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y------  168 (266)
                      ++++.+||..+..... ....+...+...-...+...|.+.|.+.+.+...+++.++.++...|..++......      
T Consensus      1827 ~~~~g~i~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~ 1905 (2582)
T TIGR02813      1827 AQIDGFIHLQPQHKSV-ADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQV 1905 (2582)
T ss_pred             cccceEEEeccccccc-cccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccccc
Confidence            6799999977754210 000000011111223445577888887776666566789999988876665332221      


Q ss_pred             --hhhHHHHHHHHHHHHHHhccCCcEEEEEecC
Q 024551          169 --AASKGAINQLTKNLACEWATDSIRVNAVSPW  199 (266)
Q Consensus       169 --~~sK~al~~~~~~~a~el~~~gi~v~~i~PG  199 (266)
                        ....+++.+|+|+++.|+....+|...+.|.
T Consensus      1906 ~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1906 KAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             ccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence              3458899999999999999877788888775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.73  E-value=0.00017  Score=66.89  Aligned_cols=48  Identities=25%  Similarity=0.224  Sum_probs=43.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      .++++|+++|+|+ +|+|++++.+|+++|++|+++.|+.++.+++++++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3578999999999 59999999999999999999999998888887765

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.71  E-value=0.0012  Score=57.25  Aligned_cols=80  Identities=23%  Similarity=0.319  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+++++|+|+++++|.+++..+...|++|+++++++++.+.+.    ..+...   ..|..+.+..+.+.+....   +.
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~---~~  235 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK----ELGADY---VIDYRKEDFVREVRELTGK---RG  235 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCe---EEecCChHHHHHHHHHhCC---CC
Confidence            5789999999999999999999999999999999887665432    222221   2355665555554443322   36


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++++++|.
T Consensus       236 ~d~~i~~~g~  245 (342)
T cd08266         236 VDVVVEHVGA  245 (342)
T ss_pred             CcEEEECCcH
Confidence            9999999883

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.62  E-value=0.0003  Score=61.33  Aligned_cols=116  Identities=14%  Similarity=0.196  Sum_probs=66.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC-------CeEEEecCChhH--HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFG-------ASVHTCGRDQNM--INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G-------~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +++||||+|.+|.+++..|+.++       ..|+++++++..  ++...-++.+.   ......|+.+..+..       
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~---~~~~~~~~~~~~~~~-------   73 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC---AFPLLKSVVATTDPE-------   73 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc---cccccCCceecCCHH-------
Confidence            58999999999999999999855       479999996531  22111111110   001111332222211       


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc--CCCeEEEEecC
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS--GNASIVFMSSV  156 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g~iv~vss~  156 (266)
                      +.+ ...|++|++||.....   ..+.   .+.++.|+    .+.+...+.+.+.  ..+.++++|..
T Consensus        74 ~~l-~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~----~i~~~i~~~i~~~~~~~~iiivvsNP  130 (325)
T cd01336          74 EAF-KDVDVAILVGAMPRKE---GMER---KDLLKANV----KIFKEQGEALDKYAKKNVKVLVVGNP  130 (325)
T ss_pred             HHh-CCCCEEEEeCCcCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEecCc
Confidence            222 3589999999976431   2232   33455554    4455556666665  25677777753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.58  E-value=0.0023  Score=54.09  Aligned_cols=145  Identities=14%  Similarity=0.148  Sum_probs=81.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChh-------------------HHHHHHHHHHhcCCeeEEEe
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQN-------------------MINERIQEWESKGFKVTGSV   73 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~-------------------~~~~~~~~l~~~~~~~~~~~   73 (266)
                      -.++++.|+|.|+ ||+|.++|+.|++.| -++.+++.+.-                   +.+.+++.+.+....+.+..
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~  104 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTV  104 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEE
Confidence            4578899999987 689999999999999 55777776532                   22233444443332222211


Q ss_pred             c-cCCCHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEE
Q 024551           74 C-DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVF  152 (266)
Q Consensus        74 ~-D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~  152 (266)
                      . +.-+++.+..++.       ...|++|.+....                     ..-..+.+.    ..+. +-.+|.
T Consensus       105 i~~~i~~e~~~~ll~-------~~~D~VIdaiD~~---------------------~~k~~L~~~----c~~~-~ip~I~  151 (268)
T PRK15116        105 VDDFITPDNVAEYMS-------AGFSYVIDAIDSV---------------------RPKAALIAY----CRRN-KIPLVT  151 (268)
T ss_pred             EecccChhhHHHHhc-------CCCCEEEEcCCCH---------------------HHHHHHHHH----HHHc-CCCEEE
Confidence            1 2222333333321       2356666655421                     011122222    2333 245665


Q ss_pred             EecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcc-CCcE
Q 024551          153 MSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT-DSIR  192 (266)
Q Consensus       153 vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~-~gi~  192 (266)
                      ..+.++.........-..+|.-...|+|.++++|.+ +||+
T Consensus       152 ~gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        152 TGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             ECCcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            555554443333445567777888999999999998 6764

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.58  E-value=0.00013  Score=59.19  Aligned_cols=49  Identities=24%  Similarity=0.342  Sum_probs=43.0

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      ..+++||+++|+|.+ .+|+++++.|.+.|++|++++++++++++..+.+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            456899999999996 8999999999999999999999988877776643

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.54  E-value=0.00076  Score=57.68  Aligned_cols=78  Identities=14%  Similarity=0.121  Sum_probs=56.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+++++++........+...  .   ++..       ..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~---~~~~-------~~  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG--S---DLAA-------AL  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--c---chHh-------hh
Confidence            567899999998 7799999999999997 6999999999999999888654332222221  1   1111       11


Q ss_pred             CCcccEEEecccc
Q 024551           94 DGKLNILVNNAAL  106 (266)
Q Consensus        94 ~~~id~lv~~ag~  106 (266)
                       ...|++||+...
T Consensus       191 -~~aDiVInaTp~  202 (284)
T PRK12549        191 -AAADGLVHATPT  202 (284)
T ss_pred             -CCCCEEEECCcC
Confidence             357999999543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.52  E-value=0.00082  Score=57.44  Aligned_cols=78  Identities=17%  Similarity=0.175  Sum_probs=63.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ...++|-||++-.|.-+|++|+.+|.+-++.+|+..+++.+.++|   |..+..+++.+  ++.+++.++        +.
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~--------~~   72 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS--------RT   72 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh--------cc
Confidence            357899999999999999999999999999999999999888877   44555555555  555555444        57


Q ss_pred             cEEEecccccc
Q 024551           98 NILVNNAALVV  108 (266)
Q Consensus        98 d~lv~~ag~~~  108 (266)
                      ++|+||+|.+.
T Consensus        73 ~VVlncvGPyt   83 (382)
T COG3268          73 QVVLNCVGPYT   83 (382)
T ss_pred             eEEEecccccc
Confidence            99999999653

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.52  E-value=0.00028  Score=60.22  Aligned_cols=77  Identities=21%  Similarity=0.344  Sum_probs=57.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++|+++|+|+ ||+|++++.+|++.| .+|.+++|+.++.+++++++.... .+.+   ++    +.       .+.
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~---~~----~~-------~~~  182 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL---DL----EL-------QEE  182 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee---cc----cc-------hhc
Confidence            3578999999997 899999999999999 789999999999988888775321 1111   11    00       111


Q ss_pred             cCCcccEEEeccccc
Q 024551           93 FDGKLNILVNNAALV  107 (266)
Q Consensus        93 ~~~~id~lv~~ag~~  107 (266)
                      . ...|++||+....
T Consensus       183 ~-~~~DivInaTp~g  196 (278)
T PRK00258        183 L-ADFDLIINATSAG  196 (278)
T ss_pred             c-ccCCEEEECCcCC
Confidence            1 4589999998754

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.49  E-value=0.0016  Score=57.80  Aligned_cols=85  Identities=14%  Similarity=0.164  Sum_probs=59.3

Q ss_pred             ccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 024551            8 VFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus         8 ~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   87 (266)
                      +++.....+.+++++|.|+ |.+|+.+++.+...|++|++++|++++++.+.+.+   +..+   ..+..+++.+.+.+ 
T Consensus       157 ~~~~~~~~l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~v---~~~~~~~~~l~~~l-  228 (370)
T TIGR00518       157 VLLGGVPGVEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGRI---HTRYSNAYEIEDAV-  228 (370)
T ss_pred             eeecCCCCCCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Ccee---EeccCCHHHHHHHH-
Confidence            4444444567788999988 78999999999999999999999988766554433   2222   23445555443332 


Q ss_pred             HHHhhcCCcccEEEeccccc
Q 024551           88 TVSSVFDGKLNILVNNAALV  107 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~  107 (266)
                             ...|++|++++..
T Consensus       229 -------~~aDvVI~a~~~~  241 (370)
T TIGR00518       229 -------KRADLLIGAVLIP  241 (370)
T ss_pred             -------ccCCEEEEccccC
Confidence                   3479999998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.49  E-value=0.0035  Score=51.88  Aligned_cols=149  Identities=19%  Similarity=0.201  Sum_probs=85.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCCh-------------------hHHHHHHHHHHhcCC--eeEE
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQ-------------------NMINERIQEWESKGF--KVTG   71 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~--~~~~   71 (266)
                      -.+++++|+|.|+ +|+|.++++.|++.|. ++.+++.+.                   .+.+.+++.+.+...  ++..
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~   85 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDA   85 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            3477899999988 6899999999999996 477777543                   233444455554433  3333


Q ss_pred             EeccCCCHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEE
Q 024551           72 SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIV  151 (266)
Q Consensus        72 ~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv  151 (266)
                      +...++ +++...++.       ..+|++|.+..-.                     ..-..+.+.+    ++. +-.+|
T Consensus        86 ~~~~i~-~~~~~~l~~-------~~~D~VvdaiD~~---------------------~~k~~L~~~c----~~~-~ip~I  131 (231)
T cd00755          86 VEEFLT-PDNSEDLLG-------GDPDFVVDAIDSI---------------------RAKVALIAYC----RKR-KIPVI  131 (231)
T ss_pred             eeeecC-HhHHHHHhc-------CCCCEEEEcCCCH---------------------HHHHHHHHHH----HHh-CCCEE
Confidence            333333 233333221       3467777664421                     1112222332    333 23555


Q ss_pred             EEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcE--EEEEe
Q 024551          152 FMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR--VNAVS  197 (266)
Q Consensus       152 ~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~--v~~i~  197 (266)
                      ...+.++.........-..+|.-...|+|.++++|.++||+  +-+|.
T Consensus       132 ~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~  179 (231)
T cd00755         132 SSMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY  179 (231)
T ss_pred             EEeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence            55444443332233445566777788999999999998885  44443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14968 putative methyltransferase; Provisional

Probab=97.49  E-value=0.0035  Score=49.78  Aligned_cols=122  Identities=16%  Similarity=0.148  Sum_probs=75.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCe---eEEEeccCCCHHHHHHHHHHHHhh
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK---VTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++++|-.|++.|.   ++..+++++.+|+.++++++.++...+.+...+..   +.++.+|+.+..         .  
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------~--   87 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF---------R--   87 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc---------c--
Confidence            367899999988776   56666777899999999999888777777655432   778888875421         1  


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHH---HHHHHHHHHHHhcCCCeEEEEec
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY---HLCQLAHPLLKASGNASIVFMSS  155 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~---~l~~~~~~~m~~~~~g~iv~vss  155 (266)
                       ...+|.++.|.+.....+.... .+.+...+.....+..   .+++.+.+.|+.  +|.++++.+
T Consensus        88 -~~~~d~vi~n~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~--gG~~~~~~~  149 (188)
T PRK14968         88 -GDKFDVILFNPPYLPTEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKP--GGRILLLQS  149 (188)
T ss_pred             -ccCceEEEECCCcCCCCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCC--CeEEEEEEc
Confidence             1368999999886543322111 1222333333333322   245555566644  456666543

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.45  E-value=0.0011  Score=56.54  Aligned_cols=81  Identities=15%  Similarity=0.145  Sum_probs=56.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++|.|+ ||-|++++.+|++.|+ ++.++.|+.++.+++++.+............+   ..+.....       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH-------
Confidence            467899999998 8899999999999997 58899999999999988875432211111122   11111111       


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                       ...|++||+....
T Consensus       193 -~~~divINaTp~G  205 (283)
T PRK14027        193 -AAADGVVNATPMG  205 (283)
T ss_pred             -hhcCEEEEcCCCC
Confidence             2479999998754

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.44  E-value=0.00072  Score=57.47  Aligned_cols=79  Identities=22%  Similarity=0.281  Sum_probs=59.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+.+||.++|.|| ||-+++++.+|++.|+ +++++.|+.++.+++++.+.+.+..+.  ..+..+.+..+         
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~--~~~~~~~~~~~---------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVE--AAALADLEGLE---------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccc--ccccccccccc---------
Confidence            4567899999998 7789999999999995 699999999999999999876553211  12222222211         


Q ss_pred             cCCcccEEEeccccc
Q 024551           93 FDGKLNILVNNAALV  107 (266)
Q Consensus        93 ~~~~id~lv~~ag~~  107 (266)
                         ..|++||+....
T Consensus       190 ---~~dliINaTp~G  201 (283)
T COG0169         190 ---EADLLINATPVG  201 (283)
T ss_pred             ---ccCEEEECCCCC
Confidence               379999998765

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.44  E-value=0.00068  Score=57.94  Aligned_cols=79  Identities=22%  Similarity=0.274  Sum_probs=56.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++|.|+ ||.|++++.+|++.|+ +|.++.|+.++.+++++++.... .+..    +...++.       .+..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~~----~~~~~~~-------~~~~  188 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VITR----LEGDSGG-------LAIE  188 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-ccee----ccchhhh-------hhcc
Confidence            367899999987 8899999999999997 59999999999998888775421 1111    1111111       1111


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                       ...|++||+.+..
T Consensus       189 -~~~DiVInaTp~g  201 (282)
T TIGR01809       189 -KAAEVLVSTVPAD  201 (282)
T ss_pred             -cCCCEEEECCCCC
Confidence             3579999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.36  E-value=0.00093  Score=53.30  Aligned_cols=108  Identities=18%  Similarity=0.240  Sum_probs=56.8

Q ss_pred             CCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH
Q 024551           16 LRGMTALVTGG----------------TRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG   79 (266)
Q Consensus        16 ~~~k~vlItGa----------------s~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~   79 (266)
                      ++||+||||+|                ||-.|.++|+++..+|+.|.++..... +..        ...+..  .++.+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~--i~v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKV--IRVESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEE--EE-SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceE--EEecch
Confidence            57899999876                468999999999999999998876532 110        123333  345555


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccccccccCCC--CCCHH-HHHHHhccchhhHHHHHHHH
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAALVVMKRAT--EYTLE-EYSSVMSTNVESSYHLCQLA  138 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~--~~~~~-~~~~~~~~n~~~~~~l~~~~  138 (266)
                      +++.+.+.   +.+ ..-|++|++|.+....+..  +-... +-.+.+.+.+.-.--+++.+
T Consensus        70 ~em~~~~~---~~~-~~~Di~I~aAAVsDf~p~~~~~~KIkK~~~~~l~l~L~~~pkIL~~l  127 (185)
T PF04127_consen   70 EEMLEAVK---ELL-PSADIIIMAAAVSDFRPEEPAEGKIKKSSGDELTLELKPTPKILAEL  127 (185)
T ss_dssp             HHHHHHHH---HHG-GGGSEEEE-SB--SEEESCHHSS-G---TT-CEEEEEEE-GGHGCCH
T ss_pred             hhhhhhhc---ccc-CcceeEEEecchhheeehhccccccccccCcceEEEEEeChHHHHHH
Confidence            55555444   444 3459999999987533211  11111 11234555555555554444

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK06849 hypothetical protein; Provisional

Probab=97.34  E-value=0.0023  Score=57.23  Aligned_cols=83  Identities=10%  Similarity=0.013  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +.|+|||||++..+|..+++.|.+.|++|++++.++.........+    .....+...-.|++...+.+.++.++.  +
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~--~   76 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE--N   76 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc--C
Confidence            3589999999999999999999999999999998875543222222    122233223345554444555555554  4


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|++|....
T Consensus        77 id~vIP~~e   85 (389)
T PRK06849         77 IDLLIPTCE   85 (389)
T ss_pred             CCEEEECCh
Confidence            899998765

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.31  E-value=0.0013  Score=57.41  Aligned_cols=78  Identities=22%  Similarity=0.368  Sum_probs=54.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC-c
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG-K   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~-~   96 (266)
                      |+++||+||+||+|...+.-....|++++++..+.++.+ .+++   .|....   .|..+.+    +.+++++..++ .
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~---lGAd~v---i~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKE---LGADHV---INYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHh---cCCCEE---EcCCccc----HHHHHHHHcCCCC
Confidence            899999999999999988888888988777777666555 4443   343322   2333333    55555554433 5


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++...|.
T Consensus       212 vDvv~D~vG~  221 (326)
T COG0604         212 VDVVLDTVGG  221 (326)
T ss_pred             ceEEEECCCH
Confidence            9999999985

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.26  E-value=0.0015  Score=58.72  Aligned_cols=75  Identities=8%  Similarity=0.225  Sum_probs=55.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++||+++|.|+ ||+|+++++.|+++|+ ++.++.|+.++.+++++++..  ..  .     ...++.       .+..
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~~--~-----~~~~~l-------~~~l  240 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--AS--A-----HYLSEL-------PQLI  240 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--Ce--E-----ecHHHH-------HHHh
Confidence            578999999999 9999999999999996 589999999988888877631  11  1     111222       2222


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                       ...|++|++.+-.
T Consensus       241 -~~aDiVI~aT~a~  253 (414)
T PRK13940        241 -KKADIIIAAVNVL  253 (414)
T ss_pred             -ccCCEEEECcCCC
Confidence             4579999998854

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.24  E-value=0.011  Score=54.51  Aligned_cols=87  Identities=16%  Similarity=0.167  Sum_probs=60.5

Q ss_pred             CCCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHH
Q 024551            5 AEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQRE   83 (266)
Q Consensus         5 ~~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~   83 (266)
                      -||-...-...+++|+++|.|+ |++|.++|+.|.++|++|.+++++. +......+.+.+.+..+.  ..+-..     
T Consensus         3 ~~~~~~~~~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~--~~~~~~-----   74 (480)
T PRK01438          3 RPPGLTSWHSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVR--LGPGPT-----   74 (480)
T ss_pred             cccchhhcccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEE--ECCCcc-----
Confidence            4555556666788999999997 6799999999999999999998554 344445566766554432  221111     


Q ss_pred             HHHHHHHhhcCCcccEEEecccccc
Q 024551           84 KLIETVSSVFDGKLNILVNNAALVV  108 (266)
Q Consensus        84 ~~~~~~~~~~~~~id~lv~~ag~~~  108 (266)
                              .. ...|.+|.++|+..
T Consensus        75 --------~~-~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         75 --------LP-EDTDLVVTSPGWRP   90 (480)
T ss_pred             --------cc-CCCCEEEECCCcCC
Confidence                    01 35799999999754

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.21  E-value=0.0082  Score=50.08  Aligned_cols=104  Identities=23%  Similarity=0.258  Sum_probs=67.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .+|++++|+|+++ +|.+++..+...|.+|+.+++++++.+.+ +.   .+...   ..|..+.+....+.   .. .++
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~---~~~~~~~~~~~~~~---~~-~~~  200 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KE---LGADH---VIDYKEEDLEEELR---LT-GGG  200 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HH---hCCce---eccCCcCCHHHHHH---Hh-cCC
Confidence            3688999999999 99999999989999999999988765443 22   23221   12433333333333   11 125


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG  158 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~  158 (266)
                      .+|+++++++..                         ...+.+++.++.  .|+++.++....
T Consensus       201 ~~d~vi~~~~~~-------------------------~~~~~~~~~l~~--~G~~v~~~~~~~  236 (271)
T cd05188         201 GADVVIDAVGGP-------------------------ETLAQALRLLRP--GGRIVVVGGTSG  236 (271)
T ss_pred             CCCEEEECCCCH-------------------------HHHHHHHHhccc--CCEEEEEccCCC
Confidence            799999998742                         123334455543  579999887653

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.16  E-value=0.011  Score=54.58  Aligned_cols=112  Identities=13%  Similarity=0.124  Sum_probs=70.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH-------------HHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG-------------DQR   82 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-------------~~i   82 (266)
                      ..+.+|+|+|+ |.+|...+..+...|++|+++++++++++...+    .|.+..  ..|..+.             +..
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes----lGA~~v--~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES----MGAEFL--ELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeEE--EeccccccccccchhhhcchhHH
Confidence            46899999998 679999999999999999999999987764433    344432  2233221             111


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecC
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSV  156 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~  156 (266)
                      ++..+...+.. +..|++|.++|......                   +..+++.++..|++  +|+||.++..
T Consensus       236 ~~~~~~~~~~~-~gaDVVIetag~pg~~a-------------------P~lit~~~v~~mkp--GgvIVdvg~~  287 (509)
T PRK09424        236 KAEMALFAEQA-KEVDIIITTALIPGKPA-------------------PKLITAEMVASMKP--GSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHhcc-CCCCEEEECCCCCcccC-------------------cchHHHHHHHhcCC--CCEEEEEccC
Confidence            22222222222 45899999999753211                   22223455666654  4688888763

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.13  E-value=0.0095  Score=51.54  Aligned_cols=113  Identities=15%  Similarity=0.130  Sum_probs=72.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcC----CeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKG----FKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |.+.|.|+ |++|++++..|+.+|  ..+++++++++..+..+.++.+..    ....+. .  .+.++       +   
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-------l---   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-------C---   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-------h---
Confidence            36788896 899999999999999  579999999999888888876542    122221 1  22221       1   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCC
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVA  157 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~  157 (266)
                        ...|++|+++|.....   ..+..   +.++.|.    .+.+...+.+++.. .+.++++|...
T Consensus        67 --~~aDIVIitag~~~~~---g~~R~---dll~~N~----~i~~~~~~~i~~~~~~~~vivvsNP~  120 (306)
T cd05291          67 --KDADIVVITAGAPQKP---GETRL---DLLEKNA----KIMKSIVPKIKASGFDGIFLVASNPV  120 (306)
T ss_pred             --CCCCEEEEccCCCCCC---CCCHH---HHHHHHH----HHHHHHHHHHHHhCCCeEEEEecChH
Confidence              3589999999975321   22332   2344444    34455555555543 56777777543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=97.12  E-value=0.0067  Score=52.52  Aligned_cols=80  Identities=18%  Similarity=0.230  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+++++|.|+++++|.+++..+.+.|++|+.++++.++.+.+.+.+   +.. .+  .|..+.+..+++.    +..++.
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~v~----~~~~~~  214 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AA--INYKTPDLAEALK----EAAPDG  214 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eE--EecCChhHHHHHH----HhccCC
Confidence            5789999999999999999999999999999998887665444323   221 11  1223322222222    221246


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.+.|.
T Consensus       215 ~d~vi~~~g~  224 (329)
T cd05288         215 IDVYFDNVGG  224 (329)
T ss_pred             ceEEEEcchH
Confidence            9999998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.12  E-value=0.0032  Score=55.06  Aligned_cols=79  Identities=14%  Similarity=0.131  Sum_probs=52.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      |++++|+|+++++|.+++..+...|+ +|+.+++++++.+.+.+++   |....+   |-.+ .+..+.+.++   .++.
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~vi---~~~~-~~~~~~i~~~---~~~g  224 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAAI---NYKT-DNVAERLREL---CPEG  224 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEEE---ECCC-CCHHHHHHHH---CCCC
Confidence            38999999999999998887777898 7999998887766555544   322211   2222 1222222222   2245


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.+.|.
T Consensus       225 vd~vid~~g~  234 (345)
T cd08293         225 VDVYFDNVGG  234 (345)
T ss_pred             ceEEEECCCc
Confidence            9999998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.10  E-value=0.0038  Score=53.47  Aligned_cols=50  Identities=20%  Similarity=0.224  Sum_probs=40.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCCh---hHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQ---NMINERIQEWES   64 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~---~~~~~~~~~l~~   64 (266)
                      .++++|+++|.|+ ||-+++++..|++.|+ +|.++.|++   ++.+++++++..
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            4578999999998 5569999999999996 688999984   577777777644

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.08  E-value=0.0057  Score=53.65  Aligned_cols=83  Identities=18%  Similarity=0.327  Sum_probs=58.1

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCCh---------------------hHHHHHHHHHHhcC--Ce
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQ---------------------NMINERIQEWESKG--FK   68 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~---------------------~~~~~~~~~l~~~~--~~   68 (266)
                      .-.+++++|+|.|+ ||+|..+++.|++.|. ++.+++++.                     .+.+.+++.+.+..  .+
T Consensus        19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~   97 (338)
T PRK12475         19 QRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVE   97 (338)
T ss_pred             HHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcE
Confidence            45678999999998 7799999999999997 688888864                     24455556666553  35


Q ss_pred             eEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           69 VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        69 ~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      +..+..|++ .+.+++++        ...|++|.+..
T Consensus        98 i~~~~~~~~-~~~~~~~~--------~~~DlVid~~D  125 (338)
T PRK12475         98 IVPVVTDVT-VEELEELV--------KEVDLIIDATD  125 (338)
T ss_pred             EEEEeccCC-HHHHHHHh--------cCCCEEEEcCC
Confidence            666666765 33343332        34688887764

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.07  E-value=0.0043  Score=53.05  Aligned_cols=80  Identities=20%  Similarity=0.344  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+++++|+|+++++|.+++..+...|++|+.++++++..+.+ +.+   +.+.   ..|..+.+..+++.+ ...  ++.
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~-~~~--~~~  208 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GADV---AINYRTEDFAEEVKE-ATG--GRG  208 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCCE---EEeCCchhHHHHHHH-HhC--CCC
Confidence            578999999999999999999999999999999988766554 322   3221   233333333333222 211  146


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|.+++++|.
T Consensus       209 ~d~vi~~~g~  218 (323)
T cd05276         209 VDVILDMVGG  218 (323)
T ss_pred             eEEEEECCch
Confidence            9999999884

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.07  E-value=0.014  Score=44.53  Aligned_cols=111  Identities=10%  Similarity=0.123  Sum_probs=71.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcC----CeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           20 TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKG----FKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+.|+|++|.+|.+++..|..++  ..+++++++++.++..+.++....    .+..+..   .+.++           +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence            58899999999999999999987  459999999998887777776541    1222222   33332           1


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEec
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSS  155 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss  155 (266)
                       ...|++|..+|....   ...+..   +.++.|.    .+.+.+.+.+.+. ..+.++.++.
T Consensus        68 -~~aDivvitag~~~~---~g~sR~---~ll~~N~----~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   68 -KDADIVVITAGVPRK---PGMSRL---DLLEANA----KIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             -TTESEEEETTSTSSS---TTSSHH---HHHHHHH----HHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             -ccccEEEEecccccc---ccccHH---HHHHHhH----hHHHHHHHHHHHhCCccEEEEeCC
Confidence             358999999997532   112333   3344444    4455555555544 3567777754

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.06  E-value=0.00068  Score=45.07  Aligned_cols=35  Identities=29%  Similarity=0.441  Sum_probs=23.4

Q ss_pred             CC-CEEEEecCCCchHHH--HHHHHHHCCCeEEEecCCh
Q 024551           17 RG-MTALVTGGTRGIGYA--IVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        17 ~~-k~vlItGas~giG~a--ia~~la~~G~~v~~~~r~~   52 (266)
                      +| |+|||+|+|+|+|.|  |+.+| ..|++.+.++...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            44 899999999999999  55555 6778888777644

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.05  E-value=0.0035  Score=54.82  Aligned_cols=81  Identities=14%  Similarity=0.207  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+++++|..++..+...|++|+.+++++++.+.+.+.+   |... +  .|-.+.++..+.+.+.   .++.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~-v--i~~~~~~~~~~~i~~~---~~~g  221 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDD-A--FNYKEEPDLDAALKRY---FPNG  221 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCce-e--EEcCCcccHHHHHHHh---CCCC
Confidence            5899999999999999998888889999999998887765554433   3221 1  2222222222222222   2246


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.+.|.
T Consensus       222 vd~v~d~~g~  231 (338)
T cd08295         222 IDIYFDNVGG  231 (338)
T ss_pred             cEEEEECCCH
Confidence            9999998873

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.04  E-value=0.007  Score=52.57  Aligned_cols=118  Identities=9%  Similarity=0.008  Sum_probs=76.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ++-+++++.|+|+ |.+|.+++..|+.+|.  .+++++++++.++..+.++.+..   .++... .  .+.++       
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~-------   70 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD-------   70 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH-------
Confidence            3456789999998 9999999999999996  69999999998888887776542   122221 1  12111       


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                          + ..-|++|..+|.....   ..+..   +.++.|..    +.+...+.+.+. ..+.+++++...
T Consensus        71 ----~-~~adivIitag~~~k~---g~~R~---dll~~N~~----i~~~i~~~i~~~~~~~~vivvsNP~  125 (315)
T PRK00066         71 ----C-KDADLVVITAGAPQKP---GETRL---DLVEKNLK----IFKSIVGEVMASGFDGIFLVASNPV  125 (315)
T ss_pred             ----h-CCCCEEEEecCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHHHhCCCeEEEEccCcH
Confidence                1 3579999999975321   22333   33444543    344445555544 356777776533

>cd00704 MDH Malate dehydrogenase

Probab=97.04  E-value=0.0037  Score=54.47  Aligned_cols=112  Identities=13%  Similarity=0.175  Sum_probs=67.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC-------eEEEecCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHH--H--HHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA-------SVHTCGRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQR--E--KLI   86 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i--~--~~~   86 (266)
                      ++.|+||+|.+|..++..|+.+|.       .++++++++  +.+              .....|+.|....  .  .+-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~--------------~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL--------------EGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc--------------ceeeeehhhhcccccCCcEEe
Confidence            578999999999999999998662       489999977  432              2333444443200  0  000


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc--CCCeEEEEecC
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS--GNASIVFMSSV  156 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g~iv~vss~  156 (266)
                      ....+.+ ...|++|+.||.....   ..+..   +.++.|.    .+.+.+.+.+.+.  +.+.++++|..
T Consensus        68 ~~~~~~~-~~aDiVVitAG~~~~~---g~tR~---dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNP  128 (323)
T cd00704          68 TDPEEAF-KDVDVAILVGAFPRKP---GMERA---DLLRKNA----KIFKEQGEALNKVAKPTVKVLVVGNP  128 (323)
T ss_pred             cChHHHh-CCCCEEEEeCCCCCCc---CCcHH---HHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence            1112222 4589999999975321   12332   3455554    4556666666665  36677777653

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.03  E-value=0.0048  Score=54.35  Aligned_cols=81  Identities=12%  Similarity=0.208  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+++++|..++..+...|++|+.+++++++.+.+.+++   |....   .|-.+.++..+.+.+.   .++.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~~~---~~~g  228 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEA---FNYKEEPDLDAALKRY---FPEG  228 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEE---EECCCcccHHHHHHHH---CCCC
Confidence            5899999999999999998888888999999888887765444333   33221   1222222233323222   2246


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.+.|.
T Consensus       229 vD~v~d~vG~  238 (348)
T PLN03154        229 IDIYFDNVGG  238 (348)
T ss_pred             cEEEEECCCH
Confidence            9999999883

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.02  E-value=0.017  Score=52.71  Aligned_cols=120  Identities=16%  Similarity=0.207  Sum_probs=69.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|+++|+|.+ ++|.++|+.|+++|++|.+.+.++..  ...+++......+.+...... ..    ..        
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~--~~~~~l~~~~~gi~~~~g~~~-~~----~~--------   65 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKP--ERVAQIGKMFDGLVFYTGRLK-DA----LD--------   65 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCc--hhHHHHhhccCCcEEEeCCCC-HH----HH--------
Confidence            3678999999986 89999999999999999998876542  112334332123333322211 11    11        


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA  159 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~  159 (266)
                      ...|.||.++|+....+.    .... +--.+.+.+-..+..   .+++.. ..++|-|+...|.
T Consensus        66 ~~~d~vv~spgi~~~~p~----~~~a-~~~~i~v~~~~~~~~---~~~~~~-~~~~I~ITGT~GK  121 (445)
T PRK04308         66 NGFDILALSPGISERQPD----IEAF-KQNGGRVLGDIELLA---DIVNRR-GDKVIAITGSNGK  121 (445)
T ss_pred             hCCCEEEECCCCCCCCHH----HHHH-HHcCCcEEEhHHHHH---HhhhcC-CCCEEEEECCCcH
Confidence            247999999998643221    1111 124456666555532   222221 2367777766654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.01  E-value=0.042  Score=47.31  Aligned_cols=41  Identities=24%  Similarity=0.384  Sum_probs=36.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMI   55 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~   55 (266)
                      ..+.+++++|.|. |++|+.++..|...|++|.+++|+++..
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            4568999999998 6799999999999999999999997654

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.99  E-value=0.0059  Score=51.74  Aligned_cols=106  Identities=16%  Similarity=0.224  Sum_probs=71.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHH-CCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~-~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +|++++|++|+++.|.-.. ++++ +|++|+.+.-.+++.+-+.+++   +-...   .|-..+    ++.+.+.+..+.
T Consensus       150 ~GetvvVSaAaGaVGsvvg-QiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD~~---idyk~~----d~~~~L~~a~P~  218 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVG-QIAKLKGCRVVGIAGGAEKCDFLTEEL---GFDAG---IDYKAE----DFAQALKEACPK  218 (340)
T ss_pred             CCCEEEEEecccccchHHH-HHHHhhCCeEEEecCCHHHHHHHHHhc---CCcee---eecCcc----cHHHHHHHHCCC
Confidence            4999999999999997544 4554 7999999999988877666665   22111   233333    344445555556


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS  161 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~  161 (266)
                      .||+.+-|.|..                          +..+++++|..  .+||+..+-++.+..
T Consensus       219 GIDvyfeNVGg~--------------------------v~DAv~~~ln~--~aRi~~CG~IS~YN~  256 (340)
T COG2130         219 GIDVYFENVGGE--------------------------VLDAVLPLLNL--FARIPVCGAISQYNA  256 (340)
T ss_pred             CeEEEEEcCCch--------------------------HHHHHHHhhcc--ccceeeeeehhhcCC
Confidence            799999999963                          12235666655  469998877766543

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.98  E-value=0.0087  Score=48.52  Aligned_cols=83  Identities=17%  Similarity=0.229  Sum_probs=54.2

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCC-------------------hhHHHHHHHHHHhcCC--eeE
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRD-------------------QNMINERIQEWESKGF--KVT   70 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~--~~~   70 (266)
                      ...+++++|+|.|+ +|+|..+++.|+..|. ++.+++++                   ..+.+.+++.+++...  ++.
T Consensus        16 q~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~   94 (202)
T TIGR02356        16 QQRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVT   94 (202)
T ss_pred             HHHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEE
Confidence            34578999999996 7899999999999997 68888876                   2344555666665433  333


Q ss_pred             EEeccCCCHHHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           71 GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        71 ~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      .+..++.. +++.++       + ...|++|.+..
T Consensus        95 ~~~~~i~~-~~~~~~-------~-~~~D~Vi~~~d  120 (202)
T TIGR02356        95 ALKERVTA-ENLELL-------I-NNVDLVLDCTD  120 (202)
T ss_pred             EehhcCCH-HHHHHH-------H-hCCCEEEECCC
Confidence            33334432 222222       2 34788887654

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.98  E-value=0.0062  Score=53.56  Aligned_cols=81  Identities=19%  Similarity=0.266  Sum_probs=54.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      -+|+.+||.||++|+|.+.+.-....|+..+++.++.+.. ++++.+   |...   ..|-.+++-++...+..    ++
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~l---GAd~---vvdy~~~~~~e~~kk~~----~~  224 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKL---GADE---VVDYKDENVVELIKKYT----GK  224 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHc---CCcE---eecCCCHHHHHHHHhhc----CC
Confidence            4789999999999999998888888885655555555543 333333   3222   24777744433333322    26


Q ss_pred             cccEEEeccccc
Q 024551           96 KLNILVNNAALV  107 (266)
Q Consensus        96 ~id~lv~~ag~~  107 (266)
                      ++|+++.|.|..
T Consensus       225 ~~DvVlD~vg~~  236 (347)
T KOG1198|consen  225 GVDVVLDCVGGS  236 (347)
T ss_pred             CccEEEECCCCC
Confidence            799999999974

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.97  E-value=0.004  Score=51.38  Aligned_cols=76  Identities=18%  Similarity=0.249  Sum_probs=56.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |.++|.|+ |-+|+.+|+.|.++|++|+++.++++..++..++    -..++.+..|-+|++-++++=-       ...|
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi-------~~aD   68 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAGI-------DDAD   68 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcCC-------CcCC
Confidence            46777777 5599999999999999999999999987764442    1256788889998887665411       3467


Q ss_pred             EEEecccc
Q 024551           99 ILVNNAAL  106 (266)
Q Consensus        99 ~lv~~ag~  106 (266)
                      ++|-..|-
T Consensus        69 ~vva~t~~   76 (225)
T COG0569          69 AVVAATGN   76 (225)
T ss_pred             EEEEeeCC
Confidence            77766653

>PRK05086 malate dehydrogenase; Provisional

Probab=96.97  E-value=0.0035  Score=54.37  Aligned_cols=116  Identities=10%  Similarity=0.046  Sum_probs=61.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHH-C--CCeEEEecCChhHHHHHHHHHHhcCCeeEEEec-cCCCHHHHHHHHHHHHhhcC
Q 024551           19 MTALVTGGTRGIGYAIVEELAR-F--GASVHTCGRDQNMINERIQEWESKGFKVTGSVC-DLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~-~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +.++|.||+|++|.+++..+.. .  +..+++++|++.. +...-++.+.. ....+.. +-.|   +.+       .. 
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~~-~~~~i~~~~~~d---~~~-------~l-   67 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHIP-TAVKIKGFSGED---PTP-------AL-   67 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcCC-CCceEEEeCCCC---HHH-------Hc-
Confidence            4789999999999999998865 2  3467888887542 11111222111 1111111 1111   111       11 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEE-EecCC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVF-MSSVA  157 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~-vss~~  157 (266)
                      ...|++|.++|......   .+   -.+.+..|....    +.+.+.|.+....++|. +|...
T Consensus        68 ~~~DiVIitaG~~~~~~---~~---R~dll~~N~~i~----~~ii~~i~~~~~~~ivivvsNP~  121 (312)
T PRK05086         68 EGADVVLISAGVARKPG---MD---RSDLFNVNAGIV----KNLVEKVAKTCPKACIGIITNPV  121 (312)
T ss_pred             CCCCEEEEcCCCCCCCC---CC---HHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCch
Confidence            24899999999764321   12   223455565444    44455556554344444 44433

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.94  E-value=0.0048  Score=52.87  Aligned_cols=43  Identities=21%  Similarity=0.385  Sum_probs=38.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE   57 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~   57 (266)
                      ..++||+++|+|. |++|+++++.|...|++|.+++|+++..+.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4788999999999 669999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.94  E-value=0.0042  Score=54.12  Aligned_cols=114  Identities=18%  Similarity=0.216  Sum_probs=69.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC-------eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHH-H-HH--HH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA-------SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQRE-K-LI--ET   88 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~-------~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~-~-~~--~~   88 (266)
                      ++.|+|++|.+|..++..|+.+|.       .+++++++++..            .......|+.|..... . ..  ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            378999999999999999998664       489999865421            1233445665554111 0 00  01


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc--CCCeEEEEecC
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS--GNASIVFMSSV  156 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g~iv~vss~  156 (266)
                      ..+.+ ...|++|+.||....      ..+.+.+.++.|+.    +.+.+.+.+.+.  +.+.|+++|..
T Consensus        69 ~~~~~-~~aDiVVitAG~~~~------~~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsNP  127 (324)
T TIGR01758        69 PAVAF-TDVDVAILVGAFPRK------EGMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGNP  127 (324)
T ss_pred             hHHHh-CCCCEEEEcCCCCCC------CCCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCCc
Confidence            12223 468999999997533      11234556666654    555566666665  35677777653

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.93  E-value=0.007  Score=52.37  Aligned_cols=75  Identities=23%  Similarity=0.325  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+++++|+|+++++|.++++.+...|++|+.+++++++.+.+    .+.+... ++  |.   ++   +.+.+.+ . ..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~~~-~~--~~---~~---~~~~~~~-~-~~  226 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGADY-VI--DG---SK---FSEDVKK-L-GG  226 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCCcE-EE--ec---HH---HHHHHHh-c-cC
Confidence            578999999999999999999999999999999888765444    2223221 11  21   11   2222222 2 36


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++++++|.
T Consensus       227 ~d~v~~~~g~  236 (332)
T cd08259         227 ADVVIELVGS  236 (332)
T ss_pred             CCEEEECCCh
Confidence            9999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.91  E-value=0.0083  Score=52.07  Aligned_cols=80  Identities=15%  Similarity=0.188  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+++++|..++..+...|++|+.+++++++.+.+ ++   .|....   .|-.+.+...+.+....   ++.
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~---lGa~~v---i~~~~~~~~~~~~~~~~---~~g  207 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KK---LGFDVA---FNYKTVKSLEETLKKAS---PDG  207 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCCEE---EeccccccHHHHHHHhC---CCC
Confidence            588999999999999999888888899999999888765544 32   343222   12232223333333332   246


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.+.|.
T Consensus       208 vdvv~d~~G~  217 (325)
T TIGR02825       208 YDCYFDNVGG  217 (325)
T ss_pred             eEEEEECCCH
Confidence            9999998874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK04148 hypothetical protein; Provisional

Probab=96.88  E-value=0.014  Score=43.78  Aligned_cols=79  Identities=10%  Similarity=0.138  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH-----------------
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG-----------------   79 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-----------------   79 (266)
                      +++.+++.|.+  .|.++|..|++.|+.|+.++.++...+...+.      .+.++..|+.++                 
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~~~~y~~a~liysirpp   87 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPNLEIYKNAKLIYSIRPP   87 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCCHHHHhcCCEEEEeCCC
Confidence            56789999987  77788999999999999999999876655443      356777888764                 


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      .+++..+.++.+..  ..|.+|.--+
T Consensus        88 ~el~~~~~~la~~~--~~~~~i~~l~  111 (134)
T PRK04148         88 RDLQPFILELAKKI--NVPLIIKPLS  111 (134)
T ss_pred             HHHHHHHHHHHHHc--CCCEEEEcCC
Confidence            35666666666664  3677776444

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.86  E-value=0.0031  Score=49.51  Aligned_cols=40  Identities=23%  Similarity=0.352  Sum_probs=35.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .+++||+++|.|++.-+|..+++.|.++|++|.++.|+.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~   79 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK   79 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence            4689999999999777899999999999999999998753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.85  E-value=0.0034  Score=52.79  Aligned_cols=75  Identities=17%  Similarity=0.131  Sum_probs=53.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++|+|||+- |+.++++|.++|+.|+.+.++....+.+.+    .+  ...+..+..|.+++.+++.+      ..+|
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g--~~~v~~g~l~~~~l~~~l~~------~~i~   67 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ--ALTVHTGALDPQELREFLKR------HSID   67 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC--CceEEECCCCHHHHHHHHHh------cCCC
Confidence            46899999997 999999999999999999888764332221    11  22344666777776665542      3689


Q ss_pred             EEEecccc
Q 024551           99 ILVNNAAL  106 (266)
Q Consensus        99 ~lv~~ag~  106 (266)
                      ++|+.+.-
T Consensus        68 ~VIDAtHP   75 (256)
T TIGR00715        68 ILVDATHP   75 (256)
T ss_pred             EEEEcCCH
Confidence            99988753

This enzyme was found to be a monomer by gel filtration.

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=96.80  E-value=0.02  Score=45.29  Aligned_cols=80  Identities=24%  Similarity=0.188  Sum_probs=63.8

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .-+++||+|+=.||+.|+   ++...+-.| ..|+.++.+++.++...+...+..+++.++.+|+++..           
T Consensus        41 ~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~-----------  106 (198)
T COG2263          41 RGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR-----------  106 (198)
T ss_pred             cCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC-----------
Confidence            357899999999988775   344445567 45999999999998888888877889999999998643           


Q ss_pred             hcCCcccEEEeccccccc
Q 024551           92 VFDGKLNILVNNAALVVM  109 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~  109 (266)
                         +++|.+|.|+.....
T Consensus       107 ---~~~dtvimNPPFG~~  121 (198)
T COG2263         107 ---GKFDTVIMNPPFGSQ  121 (198)
T ss_pred             ---CccceEEECCCCccc
Confidence               578999999986543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.76  E-value=0.0074  Score=54.65  Aligned_cols=47  Identities=26%  Similarity=0.410  Sum_probs=41.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l   62 (266)
                      ++.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.++.+++++.+
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            478999999987 9999999999999997 6999999998887777665

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.76  E-value=0.0091  Score=51.70  Aligned_cols=79  Identities=15%  Similarity=0.204  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||++++|.+++......|++|+.+++++++.+.+.+    .|.+. +  .|-.+++..++ +.   +..++.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~----~Ga~~-v--i~~~~~~~~~~-v~---~~~~~g  211 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE----LGFDA-V--FNYKTVSLEEA-LK---EAAPDG  211 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCE-E--EeCCCccHHHH-HH---HHCCCC
Confidence            58999999999999999888888899999999988876544433    33322 1  23333222222 22   222245


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.+.|.
T Consensus       212 vd~vld~~g~  221 (329)
T cd08294         212 IDCYFDNVGG  221 (329)
T ss_pred             cEEEEECCCH
Confidence            9999998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.75  E-value=0.0039  Score=57.28  Aligned_cols=48  Identities=23%  Similarity=0.271  Sum_probs=42.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++.+
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            4578999999996 79999999999999999999999998887776654

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.70  E-value=0.015  Score=50.60  Aligned_cols=145  Identities=14%  Similarity=0.105  Sum_probs=92.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC-------eEEEecCChhH--HHHHHHHHHhcC----CeeEEEeccCCCHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA-------SVHTCGRDQNM--INERIQEWESKG----FKVTGSVCDLSFGDQREKL   85 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~-------~v~~~~r~~~~--~~~~~~~l~~~~----~~~~~~~~D~~~~~~i~~~   85 (266)
                      +.+.|+|++|.+|.+++..|+.+|.       .+++++.+++.  ++..+-++....    .++.+   .-.+.      
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~~------   73 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDPN------   73 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCcH------
Confidence            5889999999999999999998884       69999985443  443444443221    01111   00111      


Q ss_pred             HHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--CCeEEEEecCCCC----
Q 024551           86 IETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--NASIVFMSSVAGA----  159 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~vss~~~~----  159 (266)
                           +.+ ..-|++|.+||....   ...+..+   .+..|.    -+.+.+.+.+.+..  .+.++++|.....    
T Consensus        74 -----~~~-~daDivvitaG~~~k---~g~tR~d---ll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~  137 (322)
T cd01338          74 -----VAF-KDADWALLVGAKPRG---PGMERAD---LLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNALI  137 (322)
T ss_pred             -----HHh-CCCCEEEEeCCCCCC---CCCcHHH---HHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH
Confidence                 111 358999999997532   1223332   344444    45666666666654  6777777764421    


Q ss_pred             ----C-CCCCchhhhhhHHHHHHHHHHHHHHhcc
Q 024551          160 ----I-SIPRLSAYAASKGAINQLTKNLACEWAT  188 (266)
Q Consensus       160 ----~-~~~~~~~y~~sK~al~~~~~~~a~el~~  188 (266)
                          . ++|....|+.++.--..|...+++.+.-
T Consensus       138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence                2 3667778999999999999999988774

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.70  E-value=0.0063  Score=51.94  Aligned_cols=39  Identities=26%  Similarity=0.341  Sum_probs=35.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .+++||.++|.|+++-.|+.++..|.++|++|.++.|..
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t  193 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT  193 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            568999999999998899999999999999998888743

>PLN00203 glutamyl-tRNA reductase

Probab=96.66  E-value=0.01  Score=54.97  Aligned_cols=46  Identities=20%  Similarity=0.317  Sum_probs=42.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l   62 (266)
                      +.+++++|.|+ |.+|+++++.|...|+ +|+++.|+.++.+.+.+++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            78999999999 9999999999999997 6999999999988887765

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.66  E-value=0.011  Score=53.35  Aligned_cols=47  Identities=26%  Similarity=0.401  Sum_probs=41.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l   62 (266)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.+++++.+
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            478999999997 999999999999999 67999999998877776654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.65  E-value=0.019  Score=50.41  Aligned_cols=39  Identities=33%  Similarity=0.434  Sum_probs=33.9

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCCh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQ   52 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~   52 (266)
                      .-.++.++|+|.|+ ||+|..+++.|++.|. ++.+++++.
T Consensus        19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         19 QQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            34678899999999 7999999999999998 688888763

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.63  E-value=0.066  Score=49.39  Aligned_cols=84  Identities=15%  Similarity=0.159  Sum_probs=56.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-------------HHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-------------GDQ   81 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-------------~~~   81 (266)
                      ...+.+++|.|+ |.+|...+..+...|++|++++++.++++...+ +   +.  .++..|..+             .+.
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---Ga--~~v~v~~~e~g~~~~gYa~~~s~~~  233 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---GA--EFLELDFKEEGGSGDGYAKVMSEEF  233 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CC--eEEeccccccccccccceeecCHHH
Confidence            345689999997 889999999999999999999999887553332 2   32  333444321             233


Q ss_pred             HHHHHHHHHhhcCCcccEEEecccc
Q 024551           82 REKLIETVSSVFDGKLNILVNNAAL  106 (266)
Q Consensus        82 i~~~~~~~~~~~~~~id~lv~~ag~  106 (266)
                      .++..+...++. ...|++|+++-+
T Consensus       234 ~~~~~~~~~e~~-~~~DIVI~Tali  257 (511)
T TIGR00561       234 IAAEMELFAAQA-KEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHHh-CCCCEEEECccc
Confidence            333344444444 569999999944

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.60  E-value=0.014  Score=52.14  Aligned_cols=48  Identities=23%  Similarity=0.328  Sum_probs=43.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWE   63 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~   63 (266)
                      ++++|+++|.|+ |-+|.-+|++|+++| .+|+++.|+.++.+++++++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            389999999999 559999999999999 568899999999999998874

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.57  E-value=0.015  Score=43.19  Aligned_cols=76  Identities=17%  Similarity=0.246  Sum_probs=54.9

Q ss_pred             EEEEecCCCchHHHHHHHHHH-CCCeEE-EecCCh----------------------hHHHHHHHHHHhcCCeeEEEecc
Q 024551           20 TALVTGGTRGIGYAIVEELAR-FGASVH-TCGRDQ----------------------NMINERIQEWESKGFKVTGSVCD   75 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~-~G~~v~-~~~r~~----------------------~~~~~~~~~l~~~~~~~~~~~~D   75 (266)
                      +++|.|++|.+|+.+++.+.+ .|..++ .++|++                      +.++++.+.     ..   +..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence            589999999999999999998 678865 566666                      223333332     12   4579


Q ss_pred             CCCHHHHHHHHHHHHhhcCCcccEEEecccc
Q 024551           76 LSFGDQREKLIETVSSVFDGKLNILVNNAAL  106 (266)
Q Consensus        76 ~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~  106 (266)
                      ++.++.+...++.+.+.   ++.+++-..|.
T Consensus        74 fT~p~~~~~~~~~~~~~---g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH---GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH---T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC---CCCEEEECCCC
Confidence            99999999999998886   47888888886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.55  E-value=0.015  Score=45.47  Aligned_cols=85  Identities=14%  Similarity=0.118  Sum_probs=58.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHH-------hcCCeeEEEeccCCCHHHHHHHHHH--H
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE-------SKGFKVTGSVCDLSFGDQREKLIET--V   89 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~-------~~~~~~~~~~~D~~~~~~i~~~~~~--~   89 (266)
                      +++-+.|. +-+|..+|+.|+++|++|.+.+|++++.+++.++-.       +.-..+.++..-+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            46677777 689999999999999999999999988877764311       1112345666778888999999887  6


Q ss_pred             HhhcCCcccEEEeccc
Q 024551           90 SSVFDGKLNILVNNAA  105 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag  105 (266)
                      .... .+=.++|.+.-
T Consensus        81 ~~~l-~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGL-RPGKIIIDMST   95 (163)
T ss_dssp             GGGS--TTEEEEE-SS
T ss_pred             hhcc-ccceEEEecCC
Confidence            6654 23355555443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.55  E-value=0.014  Score=50.70  Aligned_cols=73  Identities=21%  Similarity=0.263  Sum_probs=53.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +.+++++|.|+ |.+|+.+++.|...| .+|++++|++++.+++++++.   ..  .+     +.++..+.+        
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~~--~~-----~~~~~~~~l--------  236 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---GN--AV-----PLDELLELL--------  236 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---Ce--EE-----eHHHHHHHH--------
Confidence            68999999998 999999999999877 568899999998888777752   21  11     222222222        


Q ss_pred             CcccEEEeccccc
Q 024551           95 GKLNILVNNAALV  107 (266)
Q Consensus        95 ~~id~lv~~ag~~  107 (266)
                      ...|++|.+.+..
T Consensus       237 ~~aDvVi~at~~~  249 (311)
T cd05213         237 NEADVVISATGAP  249 (311)
T ss_pred             hcCCEEEECCCCC
Confidence            2479999998854

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.48  E-value=0.015  Score=53.10  Aligned_cols=79  Identities=22%  Similarity=0.287  Sum_probs=54.2

Q ss_pred             cCCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC
Q 024551           15 SLRGMTALVTGG----------------TRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF   78 (266)
Q Consensus        15 ~~~~k~vlItGa----------------s~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~   78 (266)
                      +++||.+|||+|                ||-.|.++|+++..+|++|.+++-..+ +       . ....+.++  ++. 
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~-~p~~v~~i--~V~-  320 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A-DPQGVKVI--HVE-  320 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C-CCCCceEE--Eec-
Confidence            589999999976                357999999999999999998763221 0       0 12234333  333 


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEeccccccc
Q 024551           79 GDQREKLIETVSSVFDGKLNILVNNAALVVM  109 (266)
Q Consensus        79 ~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~  109 (266)
                        +.+++.+.+.+.+  +.|++|++|.+...
T Consensus       321 --ta~eM~~av~~~~--~~Di~I~aAAVaDy  347 (475)
T PRK13982        321 --SARQMLAAVEAAL--PADIAIFAAAVADW  347 (475)
T ss_pred             --CHHHHHHHHHhhC--CCCEEEEeccccce
Confidence              3445555555555  36999999998643

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.47  E-value=0.022  Score=50.74  Aligned_cols=81  Identities=21%  Similarity=0.280  Sum_probs=53.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCC-------------------hhHHHHHHHHHHhcCC--eeEEE
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRD-------------------QNMINERIQEWESKGF--KVTGS   72 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~-------------------~~~~~~~~~~l~~~~~--~~~~~   72 (266)
                      .+++++|+|.|+ ||+|..+++.|+..|.. +.+++++                   ..+.+.+++.+.+...  ++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            478889999977 78999999999999974 8888886                   3455666666655433  33333


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           73 VCDLSFGDQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        73 ~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      ...+++ +.+..++        ...|++|++..
T Consensus       211 ~~~~~~-~~~~~~~--------~~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALL--------QDVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHH--------hCCCEEEECCC
Confidence            333332 2322222        24688877765

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.46  E-value=0.019  Score=49.14  Aligned_cols=79  Identities=20%  Similarity=0.320  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+++++|.+++..+...|++|+.+.++++..+.+ .+   .+.+..   .+..+.+..+.+.. ...  +..
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~---~~~~~~~~~~~~~~-~~~--~~~  208 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EA---LGADIA---INYREEDFVEVVKA-ETG--GKG  208 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCcEE---EecCchhHHHHHHH-HcC--CCC
Confidence            588999999999999999999999999999999888765533 32   232211   22223322222222 111  135


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|.+++++|
T Consensus       209 ~d~~i~~~~  217 (325)
T TIGR02824       209 VDVILDIVG  217 (325)
T ss_pred             eEEEEECCc
Confidence            999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.45  E-value=0.034  Score=45.10  Aligned_cols=39  Identities=15%  Similarity=0.257  Sum_probs=34.9

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .++++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            35699999999999 7799999999999999999998764

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.43  E-value=0.022  Score=41.48  Aligned_cols=71  Identities=24%  Similarity=0.203  Sum_probs=52.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEE
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNIL  100 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~l  100 (266)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+.+    .+  +.++..|.++++.++++--       .+.+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~----~~--~~~i~gd~~~~~~l~~a~i-------~~a~~v   66 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE----EG--VEVIYGDATDPEVLERAGI-------EKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----TT--SEEEES-TTSHHHHHHTTG-------GCESEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh----cc--cccccccchhhhHHhhcCc-------cccCEE
Confidence            467777 479999999999988899999999987654443    33  6688899999988776422       357777


Q ss_pred             Eeccc
Q 024551          101 VNNAA  105 (266)
Q Consensus       101 v~~ag  105 (266)
                      |...+
T Consensus        67 v~~~~   71 (116)
T PF02254_consen   67 VILTD   71 (116)
T ss_dssp             EEESS
T ss_pred             EEccC
Confidence            77655

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.43  E-value=0.025  Score=48.49  Aligned_cols=80  Identities=14%  Similarity=0.172  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++++++|+|+++++|.+++..+...|++|+.++++.+..+.+ .+   .+.. .++  |.......+++. +...  +..
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~g~~-~~~--~~~~~~~~~~~~-~~~~--~~~  213 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LA---LGAA-HVI--VTDEEDLVAEVL-RITG--GKG  213 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH---cCCC-EEE--ecCCccHHHHHH-HHhC--CCC
Confidence            578999999999999999999999999999999988766544 22   2321 122  222222222222 2222  135


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++++.|.
T Consensus       214 ~d~vi~~~~~  223 (328)
T cd08268         214 VDVVFDPVGG  223 (328)
T ss_pred             ceEEEECCch
Confidence            9999998883

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.41  E-value=0.0098  Score=44.40  Aligned_cols=89  Identities=13%  Similarity=0.096  Sum_probs=55.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhc--------CCeeEEEeccCCCHHHHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESK--------GFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~--------~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      .-++-|.|+ |.+|.++++.|.+.|+.|..+ +|+....+...+.+...        -.....+-+-+.|. .+..++++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHH
Confidence            347888898 779999999999999998754 67776666666554321        12344444555554 78888888


Q ss_pred             HHhh--cCCcccEEEeccccccc
Q 024551           89 VSSV--FDGKLNILVNNAALVVM  109 (266)
Q Consensus        89 ~~~~--~~~~id~lv~~ag~~~~  109 (266)
                      +...  + .+=.+++|+.|-...
T Consensus        88 La~~~~~-~~g~iVvHtSGa~~~  109 (127)
T PF10727_consen   88 LAQYGAW-RPGQIVVHTSGALGS  109 (127)
T ss_dssp             HHCC--S--TT-EEEES-SS--G
T ss_pred             HHHhccC-CCCcEEEECCCCChH
Confidence            8875  3 233699999996543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.39  E-value=0.018  Score=48.49  Aligned_cols=171  Identities=18%  Similarity=0.113  Sum_probs=97.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHH-CCCeEEEecC-------Chh-----HHHHHHHHHHhcCCeeEEEeccCCCHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELAR-FGASVHTCGR-------DQN-----MINERIQEWESKGFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~-~G~~v~~~~r-------~~~-----~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~   84 (266)
                      -|.|||.|+|+|.|.+.--..+- -|+..+.+.-       ++.     .-..+.+...+.|--..-+..|.-+.+--+.
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~k  120 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQK  120 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHH
Confidence            48999999999999884443332 4566554322       111     1123334444556666777788888888888


Q ss_pred             HHHHHHhhcCCcccEEEecccccc---ccC-------------------------------CCCCCHHHHHHHhccchhh
Q 024551           85 LIETVSSVFDGKLNILVNNAALVV---MKR-------------------------------ATEYTLEEYSSVMSTNVES  130 (266)
Q Consensus        85 ~~~~~~~~~~~~id~lv~~ag~~~---~~~-------------------------------~~~~~~~~~~~~~~~n~~~  130 (266)
                      .++.+++.+ |++|.+|+.-.-..   +.+                               ++..+.++++....+.=--
T Consensus       121 vIe~Ik~~~-g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe  199 (398)
T COG3007         121 VIEAIKQDF-GKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE  199 (398)
T ss_pred             HHHHHHHhh-ccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcc
Confidence            899999988 79999999754221   100                               0112334444443332222


Q ss_pred             HH-HHHHHHHHHH-HhcCCCeEEEEecCCCCC--CCCCchhhhhhHHHHHHHHHHHHHHhccCC
Q 024551          131 SY-HLCQLAHPLL-KASGNASIVFMSSVAGAI--SIPRLSAYAASKGAINQLTKNLACEWATDS  190 (266)
Q Consensus       131 ~~-~l~~~~~~~m-~~~~~g~iv~vss~~~~~--~~~~~~~y~~sK~al~~~~~~~a~el~~~g  190 (266)
                      -| .++.+++..= ...+ -+-+..|-.+...  +.-..+.-+.+|.=|+.-++.+...|+..|
T Consensus       200 DWq~WidaLl~advlaeg-~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~g  262 (398)
T COG3007         200 DWQMWIDALLEADVLAEG-AKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALG  262 (398)
T ss_pred             hHHHHHHHHHhccccccC-ceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcC
Confidence            22 1233332210 0112 2333333322222  222346789999999999999998888764

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.38  E-value=0.0012  Score=47.40  Aligned_cols=38  Identities=26%  Similarity=0.337  Sum_probs=32.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      ++++||.+||.|+ |.+|..-++.|.+.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            5789999999999 7899999999999999999999885

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.38  E-value=0.017  Score=52.71  Aligned_cols=57  Identities=19%  Similarity=0.257  Sum_probs=42.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQR   82 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i   82 (266)
                      .++|.|+ +.+|+.+++.|.++|+.|++++++++..+.+.+..     .+.++..|.+++..+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~~~~~~gd~~~~~~l   58 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----DVRTVVGNGSSPDVL   58 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----CEEEEEeCCCCHHHH
Confidence            5788887 89999999999999999999999998776654421     244455566554443

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=96.36  E-value=0.016  Score=48.83  Aligned_cols=85  Identities=16%  Similarity=0.178  Sum_probs=67.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +|.+++--||+|++|+++..-....|++-+-+.|+.+..+++.++|.+.|....+-+-.+.+.+-...     ...+ ++
T Consensus       160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~-----~~~~-~~  233 (354)
T KOG0025|consen  160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKF-----KGDN-PR  233 (354)
T ss_pred             CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhh-----hccC-CC
Confidence            58899999999999999998888899999999999999999999999988766554444544432222     1133 67


Q ss_pred             ccEEEeccccc
Q 024551           97 LNILVNNAALV  107 (266)
Q Consensus        97 id~lv~~ag~~  107 (266)
                      +-.-+||.|.-
T Consensus       234 prLalNcVGGk  244 (354)
T KOG0025|consen  234 PRLALNCVGGK  244 (354)
T ss_pred             ceEEEeccCch
Confidence            89999999964

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.30  E-value=0.022  Score=56.68  Aligned_cols=78  Identities=14%  Similarity=0.124  Sum_probs=62.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCC-Ce-------------EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFG-AS-------------VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ   81 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G-~~-------------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~   81 (266)
                      .+.|.++|.|+ |.+|+..++.|++.. +.             |.+.+++.+..+++++.+    .++..++.|++|.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSES  641 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHH
Confidence            35789999997 889999999998753 33             788899988877776654    246688999999988


Q ss_pred             HHHHHHHHHhhcCCcccEEEecccc
Q 024551           82 REKLIETVSSVFDGKLNILVNNAAL  106 (266)
Q Consensus        82 i~~~~~~~~~~~~~~id~lv~~ag~  106 (266)
                      +.++++        .+|+||++.+.
T Consensus       642 L~~~v~--------~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVS--------QVDVVISLLPA  658 (1042)
T ss_pred             HHHhhc--------CCCEEEECCCc
Confidence            777665        38999999875

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.30  E-value=0.044  Score=45.86  Aligned_cols=37  Identities=30%  Similarity=0.347  Sum_probs=31.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCC
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRD   51 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~   51 (266)
                      -.+++++|+|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4578999999999 89999999999999964 6676653

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.30  E-value=0.1  Score=43.04  Aligned_cols=141  Identities=16%  Similarity=0.185  Sum_probs=85.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh-------------------hHHHHHHHHHHhcCCeeEEEec
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ-------------------NMINERIQEWESKGFKVTGSVC   74 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   74 (266)
                      .++...|+|.|. ||+|.+.+.+|++.|.. +.+++-+.                   .+.+.+++.+.+....+.+...
T Consensus        27 kl~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~  105 (263)
T COG1179          27 KLKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAI  105 (263)
T ss_pred             HHhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeeh
Confidence            467788999988 78999999999999965 55554322                   2334455555555555554443


Q ss_pred             -cCCCHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEE
Q 024551           75 -DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFM  153 (266)
Q Consensus        75 -D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~v  153 (266)
                       |+-+++.+++++.       ..+|++|-+--..                     ..-..++.    +..+++- .+|-.
T Consensus       106 ~~f~t~en~~~~~~-------~~~DyvIDaiD~v---------------------~~Kv~Li~----~c~~~ki-~vIss  152 (263)
T COG1179         106 NDFITEENLEDLLS-------KGFDYVIDAIDSV---------------------RAKVALIA----YCRRNKI-PVISS  152 (263)
T ss_pred             HhhhCHhHHHHHhc-------CCCCEEEEchhhh---------------------HHHHHHHH----HHHHcCC-CEEee
Confidence             4445666666655       4578887754321                     11122322    2344432 33322


Q ss_pred             ecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccC
Q 024551          154 SSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD  189 (266)
Q Consensus       154 ss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~  189 (266)
                      ...++.........-..+|.-.+-|++.++.+|.++
T Consensus       153 ~Gag~k~DPTri~v~DiskT~~DPLa~~vR~~LRk~  188 (263)
T COG1179         153 MGAGGKLDPTRIQVADISKTIQDPLAAKVRRKLRKR  188 (263)
T ss_pred             ccccCCCCCceEEeeechhhccCcHHHHHHHHHHHh
Confidence            222223333334566788888999999999999887

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.29  E-value=0.013  Score=44.55  Aligned_cols=40  Identities=30%  Similarity=0.364  Sum_probs=36.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .+++||.++|.|.|.-+|+.++..|.++|++|..+.++..
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            4789999999999999999999999999999999886554

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.28  E-value=0.058  Score=40.60  Aligned_cols=78  Identities=18%  Similarity=0.317  Sum_probs=51.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh-------------------hHHHHHHHHHHhc--CCeeEEEecc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ-------------------NMINERIQEWESK--GFKVTGSVCD   75 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~-------------------~~~~~~~~~l~~~--~~~~~~~~~D   75 (266)
                      +++++|.|+ +++|..+++.|+..|.. +.+++.+.                   .+.+.+++.+.+.  ..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            578898888 67999999999999975 77766532                   2445556666554  3456666666


Q ss_pred             CCCHHHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           76 LSFGDQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        76 ~~~~~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      + +++....+++        ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~--------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK--------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH--------TSSEEEEESS
T ss_pred             c-cccccccccc--------CCCEEEEecC
Confidence            6 3344444442        3688887654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.19  E-value=0.019  Score=45.69  Aligned_cols=44  Identities=23%  Similarity=0.293  Sum_probs=36.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES   64 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~   64 (266)
                      +|.|.|+ |-+|+.+|..++..|++|.+++++++.++...+.+.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4678888 8899999999999999999999999988877776654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.18  E-value=0.016  Score=47.53  Aligned_cols=43  Identities=26%  Similarity=0.292  Sum_probs=38.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      ++.|+||++.+|.++++.|++.|++|.+.+|++++.+++.+..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            5889999999999999999999999999999998887766643

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=96.18  E-value=0.26  Score=38.86  Aligned_cols=77  Identities=18%  Similarity=0.233  Sum_probs=58.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .++++++=.|++.|.   ++..+++.|.+|+.++.+++.++...+.+...+.++.++..|+.+..             .+
T Consensus        18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-------------~~   81 (179)
T TIGR00537        18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV-------------RG   81 (179)
T ss_pred             cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc-------------CC
Confidence            456788888887774   56667777778999999999988888877766667888888875421             14


Q ss_pred             cccEEEecccccc
Q 024551           96 KLNILVNNAALVV  108 (266)
Q Consensus        96 ~id~lv~~ag~~~  108 (266)
                      ++|+++.|.....
T Consensus        82 ~fD~Vi~n~p~~~   94 (179)
T TIGR00537        82 KFDVILFNPPYLP   94 (179)
T ss_pred             cccEEEECCCCCC
Confidence            6899999987643

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.15  E-value=0.036  Score=47.81  Aligned_cols=80  Identities=10%  Similarity=0.060  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|.+++|.|+++++|.+++......|++++.+.++.+..+.+.+    .+... ++  +-.+.. ....+.+...  +..
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~g~~~-~~--~~~~~~-~~~~i~~~~~--~~~  208 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA----LGIGP-VV--STEQPG-WQDKVREAAG--GAP  208 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh----cCCCE-EE--cCCCch-HHHHHHHHhC--CCC
Confidence            58899999999999999999999999999998888876555543    23221 21  222222 2222222222  135


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.+.|.
T Consensus       209 ~d~v~d~~g~  218 (324)
T cd08292         209 ISVALDSVGG  218 (324)
T ss_pred             CcEEEECCCC
Confidence            9999998884

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.11  E-value=0.016  Score=49.30  Aligned_cols=44  Identities=14%  Similarity=0.233  Sum_probs=38.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEW   62 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l   62 (266)
                      +|+++|.|+ ||-+++++.+|++.|+. |.++.|+.++.+++++.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            578999997 89999999999999975 999999999888877754

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.10  E-value=0.044  Score=48.04  Aligned_cols=76  Identities=16%  Similarity=0.220  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|+|+ +++|...+..+...|+ +|+++++++++++.. +++   |....   .|..+. ++.+    +.+.. +
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~-~~~~----~~~~~-g  234 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM---GADKL---VNPQND-DLDH----YKAEK-G  234 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc---CCcEE---ecCCcc-cHHH----HhccC-C
Confidence            6899999986 8999999888888898 588889988776533 333   43322   233332 2222    22222 4


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.++|.
T Consensus       235 ~~D~vid~~G~  245 (343)
T PRK09880        235 YFDVSFEVSGH  245 (343)
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.10  E-value=0.045  Score=46.75  Aligned_cols=42  Identities=29%  Similarity=0.408  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      .|++++|+|+++++|.+++..+...|++|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999999999999999888765544

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PLN02602 lactate dehydrogenase

Probab=96.09  E-value=0.14  Score=45.12  Aligned_cols=114  Identities=10%  Similarity=0.110  Sum_probs=71.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCC---eeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGF---KVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +.+.|+|+ |.+|.++|..++.+|.  .+++++.+++.++..+-++.....   ...+ ..+ .|.+       .+    
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~dy~-------~~----  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TDYA-------VT----  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CCHH-------Hh----
Confidence            68999996 8999999999998884  499999998877777766655321   1111 111 1211       11    


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVA  157 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~  157 (266)
                       ..-|++|..||.....   ..+..+   .+..|    ..+.+.+.+.+.+.. .+.+++++...
T Consensus       104 -~daDiVVitAG~~~k~---g~tR~d---ll~~N----~~I~~~i~~~I~~~~p~~ivivvtNPv  157 (350)
T PLN02602        104 -AGSDLCIVTAGARQIP---GESRLN---LLQRN----VALFRKIIPELAKYSPDTILLIVSNPV  157 (350)
T ss_pred             -CCCCEEEECCCCCCCc---CCCHHH---HHHHH----HHHHHHHHHHHHHHCCCeEEEEecCch
Confidence             3579999999975321   223332   34444    345555566555543 67777777543

>PRK14967 putative methyltransferase; Provisional

Probab=96.08  E-value=0.21  Score=40.96  Aligned_cols=76  Identities=18%  Similarity=0.149  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .+.++|-.|+++|.   ++..+++.|. +|+.++.++..++...+.+...+.++.++..|+.+.      +   .   .+
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~---~---~~  100 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------V---E---FR  100 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------c---c---CC
Confidence            46789999987754   3445566676 899999999888777666665555677777776531      1   1   14


Q ss_pred             cccEEEeccccc
Q 024551           96 KLNILVNNAALV  107 (266)
Q Consensus        96 ~id~lv~~ag~~  107 (266)
                      .+|.++.|.+..
T Consensus       101 ~fD~Vi~npPy~  112 (223)
T PRK14967        101 PFDVVVSNPPYV  112 (223)
T ss_pred             CeeEEEECCCCC
Confidence            699999998754

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.06  E-value=0.018  Score=48.99  Aligned_cols=39  Identities=26%  Similarity=0.284  Sum_probs=35.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .+++||.++|+|.|.-+|+.++..|..+|++|.++.++.
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            478999999999999999999999999999999888754

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.06  E-value=0.065  Score=46.71  Aligned_cols=73  Identities=21%  Similarity=0.236  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|++ |+|-..++.....|++|+.++|++++++...+.    |....   .|.+|++..+.+-+        .
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd~~---i~~~~~~~~~~~~~--------~  229 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GADHV---INSSDSDALEAVKE--------I  229 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCcEE---EEcCCchhhHHhHh--------h
Confidence            49999999998 999877776666999999999999887544442    33332   23334444443333        2


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|+++..++
T Consensus       230 ~d~ii~tv~  238 (339)
T COG1064         230 ADAIIDTVG  238 (339)
T ss_pred             CcEEEECCC
Confidence            799999888

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.05  E-value=0.049  Score=44.10  Aligned_cols=37  Identities=27%  Similarity=0.318  Sum_probs=32.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCC
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRD   51 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~   51 (266)
                      -.++.++|+|.|+ ||+|..++..|++.|. ++++++++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3578899999999 7899999999999998 59999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.03  E-value=0.057  Score=46.50  Aligned_cols=79  Identities=19%  Similarity=0.270  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD-G   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~   95 (266)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.++.+.+ +++   +... +  .|..+.+..+.+    .+..+ .
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~----~~~~~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GADV-A--VDYTRPDWPDQV----REALGGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCCE-E--EecCCccHHHHH----HHHcCCC
Confidence            478999999999999999999999999999999888776544 332   3221 1  233333322322    22221 3


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|+++++.|.
T Consensus       211 ~~d~vl~~~g~  221 (324)
T cd08244         211 GVTVVLDGVGG  221 (324)
T ss_pred             CceEEEECCCh
Confidence            59999998773

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.03  E-value=0.042  Score=50.09  Aligned_cols=78  Identities=19%  Similarity=0.123  Sum_probs=59.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ...+.++|.|+ +.+|+.+++.|.++|+.|++++++++..+++.++    +..+.++..|.++++.++++--       .
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~~-------~  296 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEGI-------D  296 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcCC-------c
Confidence            45688999999 8899999999999999999999999877655553    2345677889998877544321       3


Q ss_pred             cccEEEeccc
Q 024551           96 KLNILVNNAA  105 (266)
Q Consensus        96 ~id~lv~~ag  105 (266)
                      ..|.+|.+.+
T Consensus       297 ~a~~vi~~~~  306 (453)
T PRK09496        297 EADAFIALTN  306 (453)
T ss_pred             cCCEEEECCC
Confidence            5677776544

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.02  E-value=0.056  Score=47.81  Aligned_cols=39  Identities=26%  Similarity=0.299  Sum_probs=32.2

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ   52 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~   52 (266)
                      ...+++++|+|.|+ +|+|..+++.|+..|.. +.+++.+.
T Consensus        23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            34578999999998 79999999999999965 66766543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.02  E-value=0.055  Score=44.21  Aligned_cols=37  Identities=27%  Similarity=0.365  Sum_probs=32.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCC
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRD   51 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~   51 (266)
                      ..+++++|+|.|+ +|+|..+++.|++.|.. +.+++.+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4578899999997 89999999999999976 8888876

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.01  E-value=0.013  Score=45.53  Aligned_cols=44  Identities=25%  Similarity=0.391  Sum_probs=34.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE   57 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~   57 (266)
                      .+++||+++|.|.|.-+|+.++..|.++|+.|.++..+...+++
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            56899999999999999999999999999999988776654443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.00  E-value=0.19  Score=46.30  Aligned_cols=80  Identities=16%  Similarity=0.135  Sum_probs=52.6

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      -+...-+.+|.++|.| .|+.|+++++.|.++|+.|.+.+++.....+   .+.+.|..+  +..+ .+++.       +
T Consensus         7 ~~~~~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~---~l~~~gi~~--~~~~-~~~~~-------~   72 (473)
T PRK00141          7 LSALPQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHK---LIEVTGVAD--ISTA-EASDQ-------L   72 (473)
T ss_pred             hhhcccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHH---HHHhcCcEE--EeCC-CchhH-------h
Confidence            3445557889999999 5779999999999999999999987654322   222223222  2210 11111       1


Q ss_pred             HhhcCCcccEEEecccccc
Q 024551           90 SSVFDGKLNILVNNAALVV  108 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~  108 (266)
                           ...|.+|.++|+..
T Consensus        73 -----~~~d~vV~Spgi~~   86 (473)
T PRK00141         73 -----DSFSLVVTSPGWRP   86 (473)
T ss_pred             -----cCCCEEEeCCCCCC
Confidence                 24799999999864

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.00  E-value=0.058  Score=47.03  Aligned_cols=78  Identities=17%  Similarity=0.208  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|+|+ +++|..++..+...|++ |+.+++++++.+.. +++   +...   ..|..+.+ .+++.+ ...  +.
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~---~i~~~~~~-~~~~~~-~~~--~~  230 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADF---VINSGQDD-VQEIRE-LTS--GA  230 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE---EEcCCcch-HHHHHH-HhC--CC
Confidence            4899999986 89999999988889999 99998888776543 333   3221   12333333 333222 211  13


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.+.|.
T Consensus       231 ~~d~vid~~g~  241 (339)
T cd08239         231 GADVAIECSGN  241 (339)
T ss_pred             CCCEEEECCCC
Confidence            69999999884

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.00  E-value=0.037  Score=48.18  Aligned_cols=86  Identities=15%  Similarity=0.159  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|.|+++++|.+++..+...|++|+.+.++.+..++..+.+.+.+....+...+.+ ..+...   .+.+..++.
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~---~i~~~~~~~  221 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR-SLLATE---LLKSAPGGR  221 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc-cccHHH---HHHHHcCCC
Confidence            5899999999999999999999999999888877653222333333333433222111110 002222   222222236


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|.++.+.|.
T Consensus       222 ~d~vld~~g~  231 (341)
T cd08290         222 PKLALNCVGG  231 (341)
T ss_pred             ceEEEECcCc
Confidence            8999998883

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.99  E-value=0.072  Score=44.03  Aligned_cols=82  Identities=18%  Similarity=0.259  Sum_probs=52.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh-------------------hHHHHHHHHHHhcCC--eeEE
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ-------------------NMINERIQEWESKGF--KVTG   71 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~-------------------~~~~~~~~~l~~~~~--~~~~   71 (266)
                      -.+++++|+|.|+ +|+|..+++.|+..|.. +.+++.+.                   .+.+.+++.+++...  ++..
T Consensus        17 ~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~   95 (228)
T cd00757          17 EKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA   95 (228)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            3578899999996 78999999999999975 66664422                   344555666665543  4444


Q ss_pred             EeccCCCHHHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           72 SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        72 ~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      +..+++ .+++.+++        ...|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~~--------~~~DvVi~~~d  120 (228)
T cd00757          96 YNERLD-AENAEELI--------AGYDLVLDCTD  120 (228)
T ss_pred             ecceeC-HHHHHHHH--------hCCCEEEEcCC
Confidence            444443 23333222        24788887765

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.94  E-value=0.073  Score=44.36  Aligned_cols=39  Identities=26%  Similarity=0.329  Sum_probs=31.9

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ   52 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~   52 (266)
                      ...+++++|+|.|+ ||+|..+++.|+..|.. +.+++.+.
T Consensus        19 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        19 QEALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            34578899999988 68999999999999965 66776654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.93  E-value=0.077  Score=47.03  Aligned_cols=79  Identities=14%  Similarity=0.159  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-GDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   94 (266)
                      .|++++|+|+ +++|...+..+...|+ +|+.+++++++++.. +++   +....   .|..+ .+++.+.+.++..   
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~~---i~~~~~~~~~~~~v~~~~~---  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATDC---VNPNDYDKPIQEVIVEITD---  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCeE---EcccccchhHHHHHHHHhC---
Confidence            5889999986 8999999888888898 699998888876544 333   33221   23332 2223333333222   


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.++|.
T Consensus       254 ~g~d~vid~~G~  265 (368)
T TIGR02818       254 GGVDYSFECIGN  265 (368)
T ss_pred             CCCCEEEECCCC
Confidence            369999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.91  E-value=0.036  Score=43.05  Aligned_cols=37  Identities=24%  Similarity=0.372  Sum_probs=32.3

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR   50 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r   50 (266)
                      ..+++||.++|.|| |.+|...++.|.+.|++|.+++.
T Consensus         8 ~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          8 MFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            35699999999998 55999999999999999988864

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.90  E-value=0.047  Score=47.12  Aligned_cols=77  Identities=22%  Similarity=0.208  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+++++|.|+++++|.+++......|++|+.+++++++.+.+ +++   +....   .|..+. .. ..+.+..   ++.
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~-~~-~~~~~~~---~~~  213 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKL---GAKEV---IPREEL-QE-ESIKPLE---KQR  213 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHc---CCCEE---EcchhH-HH-HHHHhhc---cCC
Confidence            368999999999999999999889999999999988775544 322   32211   222222 11 2222221   245


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|.++.+.|
T Consensus       214 ~d~vld~~g  222 (326)
T cd08289         214 WAGAVDPVG  222 (326)
T ss_pred             cCEEEECCc
Confidence            899998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.85  E-value=0.17  Score=46.83  Aligned_cols=125  Identities=16%  Similarity=0.139  Sum_probs=71.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +++|.++|.|. ++.|.++|+.|.++|++|.+.+.+...  ...+.|.+.+..+.+...+.. ++.    +        .
T Consensus         5 ~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~~~--~~~~~L~~~~~~~~~~~g~~~-~~~----~--------~   68 (498)
T PRK02006          5 LQGPMVLVLGL-GESGLAMARWCARHGARLRVADTREAP--PNLAALRAELPDAEFVGGPFD-PAL----L--------D   68 (498)
T ss_pred             cCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCCCc--hhHHHHHhhcCCcEEEeCCCc-hhH----h--------c
Confidence            56889999995 568899999999999999999875532  112234443323333222111 111    1        1


Q ss_pred             cccEEEeccccccccCCCCCCHHHHH--HHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYS--SVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGA  159 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~--~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~  159 (266)
                      ..|.+|..+|+.....  + ..+.+.  +...+.+.+-..+...+++.+.... ..++|.|+..-|.
T Consensus        69 ~~d~vv~sp~I~~~~~--~-~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGK  132 (498)
T PRK02006         69 GVDLVALSPGLSPLEA--A-LAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGK  132 (498)
T ss_pred             CCCEEEECCCCCCccc--c-cCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcH
Confidence            3699999999753210  0 012222  2346777777776655554442221 2367777776654

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.84  E-value=0.041  Score=46.48  Aligned_cols=116  Identities=13%  Similarity=0.097  Sum_probs=68.8

Q ss_pred             EEEecCCCchHHHHHHHHHHCC----CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           21 ALVTGGTRGIGYAIVEELARFG----ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +.|+|++|.+|..++..|+..|    ..|+++++++++++....++++.....  ....++--.+....       + ..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~-------~-~~   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEA-------F-KD   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHH-------h-CC
Confidence            4689998899999999999999    689999999988888777776542111  00111100111111       1 35


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSV  156 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~  156 (266)
                      .|++|..+|.....   ..+..   ..+..|    .-+.+...+.+++. .++.+++++..
T Consensus        71 aDiVv~t~~~~~~~---g~~r~---~~~~~n----~~i~~~i~~~i~~~~p~a~~i~~tNP  121 (263)
T cd00650          71 ADVVIITAGVGRKP---GMGRL---DLLKRN----VPIVKEIGDNIEKYSPDAWIIVVSNP  121 (263)
T ss_pred             CCEEEECCCCCCCc---CCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEecCc
Confidence            89999999865321   11211   122223    33445555555544 35667777643

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.81  E-value=0.022  Score=48.87  Aligned_cols=43  Identities=21%  Similarity=0.196  Sum_probs=38.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN   56 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~   56 (266)
                      .+++||.+.|.|.++-+|+.++..|.++|++|.++.|....++
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            5789999999999999999999999999999999977655433

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.80  E-value=0.073  Score=45.31  Aligned_cols=80  Identities=15%  Similarity=0.212  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +|++++|.|+++++|.+++..+...|++|+.+++++++.+.+ .+   .+... ++  +..+....+. +.....  +..
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-~~--~~~~~~~~~~-~~~~~~--~~~  205 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RA---AGADH-VI--NYRDEDFVER-VREITG--GRG  205 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH---CCCCE-EE--eCCchhHHHH-HHHHcC--CCC
Confidence            589999999999999999999999999999998888776544 22   23221 11  1122222222 222211  135


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|.++++.|.
T Consensus       206 ~d~vl~~~~~  215 (320)
T cd05286         206 VDVVYDGVGK  215 (320)
T ss_pred             eeEEEECCCc
Confidence            9999998773

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.80  E-value=0.08  Score=45.88  Aligned_cols=77  Identities=14%  Similarity=0.101  Sum_probs=47.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++++||++++|..++......|++|+.+++++++.+.+.+    .+... ++  |..+.+-.++ +.+...  +..+|
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~-~i--~~~~~~~~~~-v~~~~~--~~~~d  214 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----IGAEY-VL--NSSDPDFLED-LKELIA--KLNAT  214 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcE-EE--ECCCccHHHH-HHHHhC--CCCCc
Confidence            444555999999999888777789999999988876654433    33332 22  2222222222 222221  13599


Q ss_pred             EEEeccc
Q 024551           99 ILVNNAA  105 (266)
Q Consensus        99 ~lv~~ag  105 (266)
                      +++.+.|
T Consensus       215 ~vid~~g  221 (324)
T cd08291         215 IFFDAVG  221 (324)
T ss_pred             EEEECCC
Confidence            9999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.78  E-value=0.11  Score=45.74  Aligned_cols=41  Identities=24%  Similarity=0.379  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      .|++++|.|+ +++|..++..+...|++|+.+++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4899999999 9999999988888999999999988876544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.77  E-value=0.072  Score=46.11  Aligned_cols=79  Identities=14%  Similarity=0.106  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|.|+++++|.+++......|++|+.+.++++..+.+ +.   .+... ++  +..+. +..+.+....   +..
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-v~--~~~~~-~~~~~~~~~~---~~~  207 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KS---LGCDR-PI--NYKTE-DLGEVLKKEY---PKG  207 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HH---cCCce-EE--eCCCc-cHHHHHHHhc---CCC
Confidence            588999999999999999888888999999988887765544 22   23221 12  22222 2222222222   235


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|.++++.|.
T Consensus       208 vd~v~~~~g~  217 (329)
T cd08250         208 VDVVYESVGG  217 (329)
T ss_pred             CeEEEECCcH
Confidence            8999998773

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.75  E-value=0.086  Score=45.92  Aligned_cols=79  Identities=20%  Similarity=0.259  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+.+++|.|+++++|.+++..+.+.|++|+.+.+++++.+.+ +++   +.+..   .+..+.+..+++.+ ...  ++.
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~~~~~~~~~-~~~--~~~  234 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL---GADAF---VDFKKSDDVEAVKE-LTG--GGG  234 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCcEE---EcCCCccHHHHHHH-Hhc--CCC
Confidence            478999999999999999999999999999999988766544 333   32211   22233222222222 111  245


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|.++++.+
T Consensus       235 vd~vl~~~~  243 (341)
T cd08297         235 AHAVVVTAV  243 (341)
T ss_pred             CCEEEEcCC
Confidence            999998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.75  E-value=0.2  Score=43.50  Aligned_cols=114  Identities=11%  Similarity=0.041  Sum_probs=71.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ..+.|+|+ |.+|.++|..|+.+|.  .+++++.+++.++-.+.++....   ....+...  .|.++           +
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------h
Confidence            47889996 9999999999998884  48999999887777777776542   11111111  12211           1


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVA  157 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~  157 (266)
                       ...|++|.+||....   ...+..+   .+..|.    -+.+.+.+.+.+.. ++.+++++...
T Consensus        70 -~~adivvitaG~~~k---~g~~R~d---ll~~N~----~i~~~~~~~i~~~~p~~~vivvsNP~  123 (312)
T cd05293          70 -ANSKVVIVTAGARQN---EGESRLD---LVQRNV----DIFKGIIPKLVKYSPNAILLVVSNPV  123 (312)
T ss_pred             -CCCCEEEECCCCCCC---CCCCHHH---HHHHHH----HHHHHHHHHHHHhCCCcEEEEccChH
Confidence             357999999997543   1223333   344443    44555566555543 67788777544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.74  E-value=0.078  Score=45.40  Aligned_cols=76  Identities=22%  Similarity=0.326  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|.|+++++|.+++......|++|+.+.+++++.+.+ .+   .+.+.. +. +  .. +...   ++.+. +..
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~-~~-~--~~-~~~~---~i~~~-~~~  208 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KE---LGADEV-VI-D--DG-AIAE---QLRAA-PGG  208 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hh---cCCcEE-Ee-c--Cc-cHHH---HHHHh-CCC
Confidence            588999999999999999999999999999988887765443 22   333221 11 1  11 2122   22222 256


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|.++++.|
T Consensus       209 ~d~vl~~~~  217 (320)
T cd08243         209 FDKVLELVG  217 (320)
T ss_pred             ceEEEECCC
Confidence            999999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.73  E-value=0.079  Score=47.74  Aligned_cols=86  Identities=7%  Similarity=0.086  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC---eEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~---~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .|.+++|.|+++++|...+..+...|+   +|+.+++++++++...+.+...    |....+  .|..+.++..+.+.++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~--i~~~~~~~~~~~v~~~  252 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY--VNPATIDDLHATLMEL  252 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE--ECCCccccHHHHHHHH
Confidence            478999999999999998776666554   6999999998876554432111    212122  2333222333333332


Q ss_pred             HhhcCCcccEEEecccc
Q 024551           90 SSVFDGKLNILVNNAAL  106 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~  106 (266)
                      ..  +..+|++|.+.|.
T Consensus       253 t~--g~g~D~vid~~g~  267 (410)
T cd08238         253 TG--GQGFDDVFVFVPV  267 (410)
T ss_pred             hC--CCCCCEEEEcCCC
Confidence            22  2358999998773

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=95.73  E-value=0.07  Score=38.69  Aligned_cols=112  Identities=22%  Similarity=0.212  Sum_probs=66.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      |.+++-.|+++|.   +...+++.+ .+++.++.++..++-....+...+  .++.++..|+.+..      +..   ..
T Consensus         1 g~~vlD~~~G~G~---~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~---~~   68 (117)
T PF13659_consen    1 GDRVLDPGCGSGT---FLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVGDARDLP------EPL---PD   68 (117)
T ss_dssp             TEEEEEETSTTCH---HHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEESHHHHHH------HTC---TT
T ss_pred             CCEEEEcCcchHH---HHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEECchhhch------hhc---cC
Confidence            4567777766664   344444555 889999999998887777776653  46888888875431      111   12


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEe
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMS  154 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vs  154 (266)
                      +++|+++.|..............+           ....+.+.+.++++.  +|.++++.
T Consensus        69 ~~~D~Iv~npP~~~~~~~~~~~~~-----------~~~~~~~~~~~~L~~--gG~~~~~~  115 (117)
T PF13659_consen   69 GKFDLIVTNPPYGPRSGDKAALRR-----------LYSRFLEAAARLLKP--GGVLVFIT  115 (117)
T ss_dssp             T-EEEEEE--STTSBTT----GGC-----------HHHHHHHHHHHHEEE--EEEEEEEE
T ss_pred             ceeEEEEECCCCccccccchhhHH-----------HHHHHHHHHHHHcCC--CeEEEEEe
Confidence            679999999987632111110000           333556666666655  36777765

...

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.72  E-value=0.058  Score=37.19  Aligned_cols=36  Identities=39%  Similarity=0.537  Sum_probs=31.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecC
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARF-GASVHTCGR   50 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r   50 (266)
                      .++++|+++|.|+ ++.|+.++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4588999999999 99999999999998 567778777

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.72  E-value=0.082  Score=41.44  Aligned_cols=51  Identities=16%  Similarity=0.142  Sum_probs=38.3

Q ss_pred             CccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551            7 PVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus         7 ~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      ++++.....+...+++|+|+ +..|...++.|...|++|+..+.+.+..++.
T Consensus         9 ~~~~~~~~~~~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~   59 (168)
T PF01262_consen    9 GMLLGGPGGVPPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQL   59 (168)
T ss_dssp             SHEECTTTEE-T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHH
T ss_pred             ceeccCCCCCCCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhh
Confidence            44455556677789999995 7799999999999999999999988766543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.72  E-value=0.025  Score=48.99  Aligned_cols=114  Identities=12%  Similarity=0.117  Sum_probs=66.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCe--EEEecCCh--hHHHHHHHHHHhc----CCeeEEEeccCC-CHHHHHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGAS--VHTCGRDQ--NMINERIQEWESK----GFKVTGSVCDLS-FGDQREKLIETV   89 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~--v~~~~r~~--~~~~~~~~~l~~~----~~~~~~~~~D~~-~~~~i~~~~~~~   89 (266)
                      +++.|+|++|.+|..++..|+..|..  |++++|++  +.++....++.+.    +....   ...+ |.       +.+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~d~-------~~l   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISSDL-------SDV   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE---EEECCCH-------HHh
Confidence            46899999999999999999999865  99999955  4444433333321    11111   1111 11       111


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                           ...|++|.++|....   .+.+..   +.++.|+.-...+    .+.|.+. ..+.+|++++..
T Consensus        71 -----~~aDiViitag~p~~---~~~~r~---dl~~~n~~i~~~~----~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          71 -----AGSDIVIITAGVPRK---EGMSRL---DLAKKNAKIVKKY----AKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             -----CCCCEEEEecCCCCC---CCCCHH---HHHHHHHHHHHHH----HHHHHHHCCCeEEEEeCCch
Confidence                 458999999997532   122322   2344454444444    4444433 356777777643

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.70  E-value=0.13  Score=41.72  Aligned_cols=39  Identities=23%  Similarity=0.362  Sum_probs=33.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .+++||.++|.|| |.+|..-++.|.+.|++|.+++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4589999999998 55889999999999999999987654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.69  E-value=0.11  Score=46.04  Aligned_cols=79  Identities=13%  Similarity=0.179  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH-HHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG-DQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~   94 (266)
                      .|++++|.|+ +++|...+..+...|+ +|+.+++++++++.. +++   +....   .|..+. ++..+.+.++..   
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~~~~~~~v~~~~~---  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATDC---VNPKDHDKPIQQVLVEMTD---  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCEE---EcccccchHHHHHHHHHhC---
Confidence            5899999985 8999999998888999 688899988876543 333   33221   233332 234343433322   


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|+++.+.|.
T Consensus       255 ~g~d~vid~~g~  266 (368)
T cd08300         255 GGVDYTFECIGN  266 (368)
T ss_pred             CCCcEEEECCCC
Confidence            469999999884

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.69  E-value=0.066  Score=46.08  Aligned_cols=79  Identities=13%  Similarity=0.130  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-DG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~   95 (266)
                      .|.+++|.|+++++|.+++..+...|++|+.+.++.++.+.+ ++   .+.+..   .+..+....    .++.+.. +.
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~---~~~~~~~~~----~~~~~~~~~~  206 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KA---LGADEV---IDSSPEDLA----QRVKEATGGA  206 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hh---cCCCEE---ecccchhHH----HHHHHHhcCC
Confidence            578999999999999999999999999999988888765444 32   232211   122222222    2222222 23


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|.++.+.|.
T Consensus       207 ~~d~vl~~~g~  217 (323)
T cd05282         207 GARLALDAVGG  217 (323)
T ss_pred             CceEEEECCCC
Confidence            69999998873

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.65  E-value=0.12  Score=39.23  Aligned_cols=31  Identities=32%  Similarity=0.434  Sum_probs=26.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC-eEEEecCC
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA-SVHTCGRD   51 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~-~v~~~~r~   51 (266)
                      +++|.|+ +|+|..+++.|+..|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3788887 8999999999999997 47777654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.64  E-value=0.094  Score=43.22  Aligned_cols=78  Identities=24%  Similarity=0.345  Sum_probs=56.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++.|+.+|=.||++|   .++..+|+.|++|..++-+++.++.....-.+.+..+.+          ....++++....
T Consensus        56 ~~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y----------~~~~~edl~~~~  122 (243)
T COG2227          56 FDLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDY----------RQATVEDLASAG  122 (243)
T ss_pred             cCCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccc----------hhhhHHHHHhcC
Confidence            3488999999999999   589999999999999999998887666655555544333          222333333332


Q ss_pred             CCcccEEEeccc
Q 024551           94 DGKLNILVNNAA  105 (266)
Q Consensus        94 ~~~id~lv~~ag  105 (266)
                       +++|+|++.--
T Consensus       123 -~~FDvV~cmEV  133 (243)
T COG2227         123 -GQFDVVTCMEV  133 (243)
T ss_pred             -CCccEEEEhhH
Confidence             68999987543

>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional

Probab=95.64  E-value=1.6  Score=39.28  Aligned_cols=82  Identities=16%  Similarity=0.080  Sum_probs=54.6

Q ss_pred             CCCCEEEEecCCC-chHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCC---eeEEEeccCCCHHHHHHHHHHHH
Q 024551           16 LRGMTALVTGGTR-GIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGF---KVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        16 ~~~k~vlItGas~-giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+||++|=.|+.. +++.    +.+..|+ +|+.++.++..++...+.+..++.   ++.++..|+.+.      +.+..
T Consensus       219 ~~g~rVLDlfsgtG~~~l----~aa~~ga~~V~~VD~s~~al~~a~~N~~~Ngl~~~~v~~i~~D~~~~------l~~~~  288 (396)
T PRK15128        219 VENKRVLNCFSYTGGFAV----SALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKL------LRTYR  288 (396)
T ss_pred             cCCCeEEEeccCCCHHHH----HHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCcEEEEEccHHHH------HHHHH
Confidence            3678888666554 4433    2234555 799999999999888877776652   678888887532      22222


Q ss_pred             hhcCCcccEEEecccccc
Q 024551           91 SVFDGKLNILVNNAALVV  108 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~  108 (266)
                      +. ++++|++|.++....
T Consensus       289 ~~-~~~fDlVilDPP~f~  305 (396)
T PRK15128        289 DR-GEKFDVIVMDPPKFV  305 (396)
T ss_pred             hc-CCCCCEEEECCCCCC
Confidence            22 247999999988654

>PLN02740 Alcohol dehydrogenase-like

Probab=95.63  E-value=0.11  Score=46.36  Aligned_cols=79  Identities=15%  Similarity=0.153  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH-HHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG-DQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~   94 (266)
                      .|++++|.|+ +++|..++..+...|+ +|+.+++++++++... +   .|... +  .|..+. ++..+.+.++.   +
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~---~Ga~~-~--i~~~~~~~~~~~~v~~~~---~  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-E---MGITD-F--INPKDSDKPVHERIREMT---G  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-H---cCCcE-E--EecccccchHHHHHHHHh---C
Confidence            5889999986 8999999988888998 5889999888765443 2   23322 2  233332 12223333222   2


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|+++.+.|.
T Consensus       267 ~g~dvvid~~G~  278 (381)
T PLN02740        267 GGVDYSFECAGN  278 (381)
T ss_pred             CCCCEEEECCCC
Confidence            369999999984

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.60  E-value=0.12  Score=46.80  Aligned_cols=113  Identities=13%  Similarity=0.044  Sum_probs=74.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-------CC--eEEEecCChhHHHHHHHHHHhcC----CeeEEEeccCCCHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARF-------GA--SVHTCGRDQNMINERIQEWESKG----FKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~-------G~--~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~i~~~~   86 (266)
                      +|.|+|++|.+|.+++..|+.+       |.  .+++++++++.++-.+-+|.+..    .++.+ ..  .+.++     
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~ye~-----  173 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPYEV-----  173 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCHHH-----
Confidence            6889999999999999999988       64  58999999999888777776542    11111 11  12222     


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh--cCCCeEEEEecCC
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA--SGNASIVFMSSVA  157 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~--~~~g~iv~vss~~  157 (266)
                            + ..-|++|..+|.... +  ..+..   +.++.|..    +.+...+.+.+  ..++.||++|...
T Consensus       174 ------~-kdaDiVVitAG~prk-p--G~tR~---dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsNPv  229 (444)
T PLN00112        174 ------F-QDAEWALLIGAKPRG-P--GMERA---DLLDINGQ----IFAEQGKALNEVASRNVKVIVVGNPC  229 (444)
T ss_pred             ------h-CcCCEEEECCCCCCC-C--CCCHH---HHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCCcH
Confidence                  2 458999999997532 1  22332   34555544    45555666666  3567888877543

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.60  E-value=0.032  Score=42.71  Aligned_cols=42  Identities=24%  Similarity=0.236  Sum_probs=35.7

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES   64 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~   64 (266)
                      |+.+|+++-+|++||..|.++|.+|+.+  ++++-+.+..++..
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~   42 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPE   42 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCH
Confidence            5789999999999999999999999988  66666777766643

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.57  E-value=0.041  Score=38.56  Aligned_cols=40  Identities=23%  Similarity=0.305  Sum_probs=33.8

Q ss_pred             EEecCCCchHHHHHHHHHHCC---CeEEEe-cCChhHHHHHHHHH
Q 024551           22 LVTGGTRGIGYAIVEELARFG---ASVHTC-GRDQNMINERIQEW   62 (266)
Q Consensus        22 lItGas~giG~aia~~la~~G---~~v~~~-~r~~~~~~~~~~~l   62 (266)
                      .|. |+|.+|.++++.|.+.|   .+|.+. +|++++.+++.++.
T Consensus         3 ~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    3 GII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            344 77899999999999999   889855 99999988887765

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.56  E-value=0.24  Score=44.40  Aligned_cols=116  Identities=15%  Similarity=0.199  Sum_probs=63.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEE-ecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|. |.++||..++..+...|+++++ +++++++++.. +++   |.+.    .+.....+..+.+.++..  +.
T Consensus       185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~---Ga~~----v~~~~~~~~~~~v~~~~~--~~  253 (393)
T TIGR02819       185 PGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSF---GCET----VDLSKDATLPEQIEQILG--EP  253 (393)
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHc---CCeE----EecCCcccHHHHHHHHcC--CC
Confidence            58899995 5589999998888888998654 45666554433 333   4331    232222222222333222  13


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSV  156 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~  156 (266)
                      .+|++|.+.|....+...+    .    +.   ...-...+.++..++.  +|+|++++..
T Consensus       254 g~Dvvid~~G~~~~~~~~~----~----~~---~~~~~~~~~~~~~~~~--~G~i~~~G~~  301 (393)
T TIGR02819       254 EVDCAVDCVGFEARGHGHD----G----KK---EAPATVLNSLMEVTRV--GGAIGIPGLY  301 (393)
T ss_pred             CCcEEEECCCCcccccccc----c----cc---cchHHHHHHHHHHhhC--CCEEEEeeec
Confidence            5899999999642211110    0    00   0222233444554444  5899999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK08223 hypothetical protein; Validated

Probab=95.56  E-value=0.075  Score=45.32  Aligned_cols=39  Identities=26%  Similarity=0.319  Sum_probs=32.4

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ   52 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~   52 (266)
                      ...+++.+|+|.|+ +|+|..+++.|+..|.. +.+++.+.
T Consensus        22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            34578899999998 68999999999999965 77777654

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.56  E-value=0.081  Score=46.09  Aligned_cols=117  Identities=10%  Similarity=0.091  Sum_probs=69.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcC----CeeEEEeccCCCHHHHHHHHHHHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKG----FKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+.+.+.|+|| |.+|..++..++..| ..+++++++++.++...-++....    .... +.. -+|.+.         
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~~~---------   70 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNYED---------   70 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCHHH---------
Confidence            45678999997 889999999999999 789999998876543332232211    0111 111 112111         


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCC
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVA  157 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~  157 (266)
                        + ..-|++|.++|.....   ..+.   .+.+..|.    -+.+.+.+.|.+.. .+.+++++...
T Consensus        71 --l-~~ADiVVitag~~~~~---g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         71 --I-KDSDVVVITAGVQRKE---EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             --h-CCCCEEEECCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence              1 2479999999875321   1222   23444555    45566666666543 55677776644

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.53  E-value=0.1  Score=41.16  Aligned_cols=32  Identities=28%  Similarity=0.370  Sum_probs=27.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh
Q 024551           20 TALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ   52 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~-v~~~~r~~   52 (266)
                      +|+|.|+ +|+|..+++.|++.|.. +.+++.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3678886 89999999999999986 88988875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.53  E-value=0.19  Score=40.62  Aligned_cols=73  Identities=16%  Similarity=0.144  Sum_probs=47.4

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhc-----------CCeeEEEeccCCCHHHHHHHHHH
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESK-----------GFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~-----------~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ....+|++.||.+++++|++.|+.|++.+| .++..+...+.+...           ...+.++..-   .+.+...+.+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHH
Confidence            345677899999999999999999988754 556666666665422           1233333222   2456667777


Q ss_pred             HHhhcCCc
Q 024551           89 VSSVFDGK   96 (266)
Q Consensus        89 ~~~~~~~~   96 (266)
                      +.+.++++
T Consensus        80 l~~~~~~K   87 (211)
T COG2085          80 LRDALGGK   87 (211)
T ss_pred             HHHHhCCe
Confidence            77766334

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.53  E-value=0.095  Score=46.96  Aligned_cols=42  Identities=14%  Similarity=0.100  Sum_probs=35.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      .|.+++|+|+++++|.+++..+...|++++.++++.++.+.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            578999999999999999988888999988888777655433

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.51  E-value=0.087  Score=46.71  Aligned_cols=78  Identities=18%  Similarity=0.235  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|.|+ +++|..++..+...|+ +|+.+++++++++.. +++   +... +  .|..+++    ..+++.+..++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~-~--i~~~~~~----~~~~i~~~~~~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GATA-T--VNAGDPN----AVEQVRELTGG  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCce-E--eCCCchh----HHHHHHHHhCC
Confidence            5889999985 8999998888888899 588888888876533 333   3321 1  2333322    22233332224


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.+.|.
T Consensus       259 g~d~vid~~G~  269 (371)
T cd08281         259 GVDYAFEMAGS  269 (371)
T ss_pred             CCCEEEECCCC
Confidence            69999999884

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.49  E-value=0.12  Score=45.87  Aligned_cols=37  Identities=27%  Similarity=0.435  Sum_probs=31.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCC
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRD   51 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~   51 (266)
                      ..+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4577889999988 6899999999999996 57777764

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.48  E-value=0.11  Score=44.74  Aligned_cols=79  Identities=13%  Similarity=0.242  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-DG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~   95 (266)
                      .|.+++|.|+++++|.+++..+...|++++.+.+++++.+.+. .   .+... +  .+..+.+.   +.+.+.+.. +.
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~-~--~~~~~~~~---~~~~~~~~~~~~  209 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-K---LAAII-L--IRYPDEEG---FAPKVKKLTGEK  209 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCcE-E--EecCChhH---HHHHHHHHhCCC
Confidence            5789999999999999999999999999888888887655442 2   23321 1  12222221   222222222 13


Q ss_pred             cccEEEeccc
Q 024551           96 KLNILVNNAA  105 (266)
Q Consensus        96 ~id~lv~~ag  105 (266)
                      .+|.++++.|
T Consensus       210 ~~d~~i~~~~  219 (334)
T PTZ00354        210 GVNLVLDCVG  219 (334)
T ss_pred             CceEEEECCc
Confidence            5999999876

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.47  E-value=0.095  Score=46.78  Aligned_cols=39  Identities=15%  Similarity=0.119  Sum_probs=32.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMI   55 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~   55 (266)
                      +.+++.|.||||-+|+.+.+.|.++ +.+|..++++....
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG   76 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG   76 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC
Confidence            4568999999999999999999999 67888877765443

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.47  E-value=0.11  Score=45.82  Aligned_cols=78  Identities=22%  Similarity=0.234  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD-   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   94 (266)
                      .|++++|.|+ +++|...+..+...|++ |+.+++++++.+.+ ++   .+... +  .|..+++..+.    +.+..+ 
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~---~Ga~~-~--i~~~~~~~~~~----i~~~~~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-RE---FGATH-T--VNSSGTDPVEA----IRALTGG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCce-E--EcCCCcCHHHH----HHHHhCC
Confidence            4899999985 89999998888888986 88888888776544 22   23321 1  23333222222    222221 


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      ..+|++|.+.|.
T Consensus       244 ~g~d~vid~~g~  255 (358)
T TIGR03451       244 FGADVVIDAVGR  255 (358)
T ss_pred             CCCCEEEECCCC
Confidence            358999999884

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.43  E-value=0.15  Score=45.10  Aligned_cols=79  Identities=14%  Similarity=0.187  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH-HHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG-DQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~   94 (266)
                      .|.+++|.|+ +++|..++..+...|+ +|+.+++++++.+.+ +.   .|....   .|..+. ++..+.+.++.   +
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~---~Ga~~~---i~~~~~~~~~~~~v~~~~---~  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KK---FGVTEF---VNPKDHDKPVQEVIAEMT---G  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCceE---EcccccchhHHHHHHHHh---C
Confidence            5899999985 8999998888888898 799999988776543 22   333211   132221 23333333332   2


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|+++.+.|.
T Consensus       256 ~~~d~vid~~G~  267 (369)
T cd08301         256 GGVDYSFECTGN  267 (369)
T ss_pred             CCCCEEEECCCC
Confidence            469999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.43  E-value=0.058  Score=44.23  Aligned_cols=38  Identities=32%  Similarity=0.484  Sum_probs=31.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEE-ecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHT-CGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~-~~r~~   52 (266)
                      .+++|++++|-| .|.+|+++|+.|.++|++|+. ++.+.
T Consensus        19 ~~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g   57 (217)
T cd05211          19 DSLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDG   57 (217)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence            468999999999 488999999999999998765 44444

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.41  E-value=0.052  Score=46.20  Aligned_cols=39  Identities=21%  Similarity=0.357  Sum_probs=34.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .+++||.++|.|.|.-+|+-++..|.++|++|.++....
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t  191 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT  191 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc
Confidence            578999999999999999999999999999998875443

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.40  E-value=0.11  Score=41.99  Aligned_cols=37  Identities=24%  Similarity=0.344  Sum_probs=30.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCC
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRD   51 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~   51 (266)
                      ..+++++|+|.|+ +|+|..+++.|+..|.. +.+++.+
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            3467889999986 55999999999999976 6677654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.38  E-value=0.15  Score=44.29  Aligned_cols=117  Identities=11%  Similarity=0.056  Sum_probs=66.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ++.|+|++|.+|.++|..|+.++.  .++++++++  .+-.+-+|........+..+.-.  ++       ..+.+ ..-
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~--~~-------~~~~~-~da   68 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGE--EG-------LENAL-KGA   68 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCC--Cc-------hHHHc-CCC
Confidence            368999999999999999999884  589999876  22111222221111111100000  00       11122 458


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCC
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAG  158 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~  158 (266)
                      |++|..+|.....   ..+   -.+.+..|..    +.+...+.+.+.. .+.|+++|....
T Consensus        69 DivvitaG~~~~~---g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvD  120 (312)
T TIGR01772        69 DVVVIPAGVPRKP---GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVN  120 (312)
T ss_pred             CEEEEeCCCCCCC---Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchh
Confidence            9999999975321   112   2234666655    5555666655543 677787877664

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.35  E-value=0.14  Score=44.98  Aligned_cols=78  Identities=23%  Similarity=0.275  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD-   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   94 (266)
                      .|++++|+|+ +++|..++..+...|+ +|+.+++++++.+.+ .++   +....   .|-.+.+-    .+++.+..+ 
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~~----~~~l~~~~~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL---GATIV---LDPTEVDV----VAEVRKLTGG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCEE---ECCCccCH----HHHHHHHhCC
Confidence            5889999985 7999999998889999 788888888776543 333   33221   23333322    222333222 


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|+++.+.|.
T Consensus       240 ~~~d~vid~~g~  251 (351)
T cd08233         240 GGVDVSFDCAGV  251 (351)
T ss_pred             CCCCEEEECCCC
Confidence            249999999884

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.35  E-value=0.18  Score=37.30  Aligned_cols=67  Identities=18%  Similarity=0.331  Sum_probs=45.1

Q ss_pred             chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC-cccEEEecccc
Q 024551           29 GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG-KLNILVNNAAL  106 (266)
Q Consensus        29 giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~-~id~lv~~ag~  106 (266)
                      |||...+.-+...|++|+.+++++++.+.+.    +.|....   .|-++.+    +.+++++..++ .+|++|.|+|.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~----~~Ga~~~---~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~   68 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK----ELGADHV---IDYSDDD----FVEQIRELTGGRGVDVVIDCVGS   68 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HTTESEE---EETTTSS----HHHHHHHHTTTSSEEEEEESSSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH----hhccccc---ccccccc----cccccccccccccceEEEEecCc
Confidence            5888988888889999999999998764433    3342222   2333333    44455554433 69999999993

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.34  E-value=0.12  Score=45.23  Aligned_cols=40  Identities=28%  Similarity=0.360  Sum_probs=35.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM   54 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~   54 (266)
                      ..++||++.|.|. |.||+++|+.|...|++|+..+|+++.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            3589999999987 669999999999999999999998754

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.34  E-value=0.17  Score=44.56  Aligned_cols=82  Identities=17%  Similarity=0.197  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|+| ++++|.+++..+...|+ +|+++++++++.+.+ ++   .+... ++..+-.+.......+.++..  +.
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~---~g~~~-vi~~~~~~~~~~~~~i~~~~~--~~  248 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-RE---FGADA-TIDIDELPDPQRRAIVRDITG--GR  248 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCCe-EEcCcccccHHHHHHHHHHhC--CC
Confidence            688999997 59999999988888999 899898887765433 22   23221 111111111111122222222  13


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|+++.+.|.
T Consensus       249 ~~d~vid~~g~  259 (361)
T cd08231         249 GADVVIEASGH  259 (361)
T ss_pred             CCcEEEECCCC
Confidence            59999999874

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.33  E-value=0.098  Score=46.74  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      .|.+++|+|+++++|.+++..+...|++++.+++++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            578999999999999999988888999988888888776544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.29  E-value=0.042  Score=50.00  Aligned_cols=42  Identities=31%  Similarity=0.363  Sum_probs=36.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE   61 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~   61 (266)
                      ++.|.||+|.+|.++++.|.+.|++|.+++|+++..++.+.+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~   43 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE   43 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH
Confidence            689999999999999999999999999999998776544443

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.23  E-value=0.31  Score=42.01  Aligned_cols=84  Identities=15%  Similarity=0.183  Sum_probs=55.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH----------HhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW----------ESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l----------~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++.|.|. +.+|.++++.|++.|++|.+.+|++++.+++.+.-          .+.-....++.+=+.+. .++++++++
T Consensus         2 ~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~-~~~~v~~~l   79 (298)
T TIGR00872         2 QLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG-IVDAVLEEL   79 (298)
T ss_pred             EEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCch-HHHHHHHHH
Confidence            4667775 77999999999999999999999998877665421          11001122333334444 777788777


Q ss_pred             HhhcCCcccEEEecccc
Q 024551           90 SSVFDGKLNILVNNAAL  106 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~  106 (266)
                      .... .+=+++|++...
T Consensus        80 ~~~l-~~g~ivid~st~   95 (298)
T TIGR00872        80 APTL-EKGDIVIDGGNS   95 (298)
T ss_pred             HhhC-CCCCEEEECCCC
Confidence            7655 222677776554

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.22  E-value=0.22  Score=40.58  Aligned_cols=91  Identities=19%  Similarity=0.145  Sum_probs=59.0

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHH-----hc-----CCeeEEEeccCCC
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWE-----SK-----GFKVTGSVCDLSF   78 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~-----~~-----~~~~~~~~~D~~~   78 (266)
                      .+-.++++||.|+|.||+ ..|..=++.|++.|++|++++... +.+..+.++-.     +.     -..+.++.+...|
T Consensus         4 lPl~~~l~~k~VlvvGgG-~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d   82 (210)
T COG1648           4 LPLFLDLEGKKVLVVGGG-SVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDD   82 (210)
T ss_pred             cceEEEcCCCEEEEECCC-HHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCC
Confidence            445577999999999985 478888999999999999888766 44444443322     00     0124455566666


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEecccc
Q 024551           79 GDQREKLIETVSSVFDGKLNILVNNAAL  106 (266)
Q Consensus        79 ~~~i~~~~~~~~~~~~~~id~lv~~ag~  106 (266)
                      ++--++++..+.+.     .++||.+..
T Consensus        83 ~~ln~~i~~~a~~~-----~i~vNv~D~  105 (210)
T COG1648          83 EELNERIAKAARER-----RILVNVVDD  105 (210)
T ss_pred             HHHHHHHHHHHHHh-----CCceeccCC
Confidence            66666666655443     355565553

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.21  E-value=0.046  Score=46.87  Aligned_cols=39  Identities=26%  Similarity=0.372  Sum_probs=35.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~   52 (266)
                      .+++||+++|.|-+.-+|+.+|..|.++|+.|.++ .|++
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            47899999999999999999999999999999998 4665

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.19  E-value=0.16  Score=43.92  Aligned_cols=79  Identities=9%  Similarity=0.108  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|.+++|.|+++.+|.+++..+...|++|+.+.+++++.+.+ ++   .+... ++  +..+.. ....+.+...  +..
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~---~g~~~-~~--~~~~~~-~~~~~~~~~~--~~~  209 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KK---AGAWQ-VI--NYREEN-IVERVKEITG--GKK  209 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---CCCCE-EE--cCCCCc-HHHHHHHHcC--CCC
Confidence            578999999999999999988888999999888887765433 32   23221 22  222222 2222222222  135


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|+++.+.|
T Consensus       210 ~d~vl~~~~  218 (327)
T PRK10754        210 VRVVYDSVG  218 (327)
T ss_pred             eEEEEECCc
Confidence            899998877

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.18  E-value=0.16  Score=43.08  Aligned_cols=77  Identities=13%  Similarity=0.161  Sum_probs=48.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|.|+ +++|..++..+...|++ |+.+++++++++. ++++   +....   .|..+.   .+.+.+...  +.
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~-a~~~---Ga~~~---i~~~~~---~~~~~~~~~--~~  186 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL-ALSF---GATAL---AEPEVL---AERQGGLQN--GR  186 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc---CCcEe---cCchhh---HHHHHHHhC--CC
Confidence            6899999987 79999998888888987 7778877776543 3332   33221   122221   122222211  13


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.+.|.
T Consensus       187 g~d~vid~~G~  197 (280)
T TIGR03366       187 GVDVALEFSGA  197 (280)
T ss_pred             CCCEEEECCCC
Confidence            58999999884

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases

Probab=95.18  E-value=0.16  Score=39.81  Aligned_cols=75  Identities=25%  Similarity=0.338  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe--EEEecCChhHHHHHHHHHHhcCCe-eEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS--VHTCGRDQNMINERIQEWESKGFK-VTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~--v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|=.|+++|   .++..+++++.+  |+.++.++..++...+.+...+.. +.++..|+.+.-.            
T Consensus        31 ~~~~vLDlG~G~G---~i~~~la~~~~~~~v~~vDi~~~a~~~a~~n~~~n~~~~v~~~~~d~~~~~~------------   95 (170)
T PF05175_consen   31 KGGRVLDLGCGSG---VISLALAKRGPDAKVTAVDINPDALELAKRNAERNGLENVEVVQSDLFEALP------------   95 (170)
T ss_dssp             TTCEEEEETSTTS---HHHHHHHHTSTCEEEEEEESBHHHHHHHHHHHHHTTCTTEEEEESSTTTTCC------------
T ss_pred             cCCeEEEecCChH---HHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCcccccccccccccccc------------
Confidence            6778998998777   344455555544  999999999998888888777654 8899999875321            


Q ss_pred             CCcccEEEecccc
Q 024551           94 DGKLNILVNNAAL  106 (266)
Q Consensus        94 ~~~id~lv~~ag~  106 (266)
                      .+++|.++.|+..
T Consensus        96 ~~~fD~Iv~NPP~  108 (170)
T PF05175_consen   96 DGKFDLIVSNPPF  108 (170)
T ss_dssp             TTCEEEEEE---S
T ss_pred             ccceeEEEEccch
Confidence            2689999999883

; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A ....

>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A

Probab=95.16  E-value=0.21  Score=35.27  Aligned_cols=82  Identities=20%  Similarity=0.228  Sum_probs=55.0

Q ss_pred             CCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEec
Q 024551           26 GTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNN  103 (266)
Q Consensus        26 as~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~  103 (266)
                      |++...+.++..+ +.|  .+++.++.+++.++...+...+.+.++++++.|+.+..          .. .++.|+++.+
T Consensus         7 G~G~~~~~l~~~~-~~~~~~~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l~----------~~-~~~~D~v~~~   74 (101)
T PF13649_consen    7 GTGRVTRALARRF-DAGPSSRVIGVDISPEMLELAKKRFSEDGPKVRFVQADARDLP----------FS-DGKFDLVVCS   74 (101)
T ss_dssp             TTSHHHHHHHHHS------SEEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTCHH----------HH-SSSEEEEEE-
T ss_pred             CCcHHHHHHHHHh-hhcccceEEEEECCHHHHHHHHHhchhcCCceEEEECCHhHCc----------cc-CCCeeEEEEc
Confidence            5566666677766 666  78999999999999888888776779999999998742          11 2689999995


Q ss_pred             cccccccCCCCCCHHHHHHHh
Q 024551          104 AALVVMKRATEYTLEEYSSVM  124 (266)
Q Consensus       104 ag~~~~~~~~~~~~~~~~~~~  124 (266)
                      .....     ..+.+++++.+
T Consensus        75 ~~~~~-----~~~~~~~~~ll   90 (101)
T PF13649_consen   75 GLSLH-----HLSPEELEALL   90 (101)
T ss_dssp             TTGGG-----GSSHHHHHHHH
T ss_pred             CCccC-----CCCHHHHHHHH
Confidence            55221     23555555443

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.14  E-value=0.12  Score=41.68  Aligned_cols=76  Identities=18%  Similarity=0.201  Sum_probs=54.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ...++++|-.|++.|.   .+..|+++|++|+.++.+++.++...+.....+. ++.+...|+.+..            +
T Consensus        28 ~~~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~------------~   92 (197)
T PRK11207         28 VVKPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLT------------F   92 (197)
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCC------------c
Confidence            3467889999988775   5677888999999999999888777666655443 3666666765321            1


Q ss_pred             CCcccEEEeccc
Q 024551           94 DGKLNILVNNAA  105 (266)
Q Consensus        94 ~~~id~lv~~ag  105 (266)
                      ++.+|+++.+..
T Consensus        93 ~~~fD~I~~~~~  104 (197)
T PRK11207         93 DGEYDFILSTVV  104 (197)
T ss_pred             CCCcCEEEEecc
Confidence            246899887654

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.13  E-value=0.25  Score=42.84  Aligned_cols=116  Identities=12%  Similarity=0.051  Sum_probs=66.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           20 TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ++.|+|++|.+|.++|..|+.+|  ..+++++.+  .++-.+-+|.+.........+. .+ ++       ..+.+ ..-
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~-------~y~~~-~da   69 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EE-------LKKAL-KGA   69 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cc-------hHHhc-CCC
Confidence            67899999999999999999988  358999987  3332333333321111111110 00 00       11112 458


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                      |++|.+||.... +  ..+.   .+.++.|..-.-.+    .+.+.+. ..+.++++|...
T Consensus        70 DivvitaG~~~k-~--g~tR---~dll~~N~~i~~~i----~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          70 DVVVIPAGVPRK-P--GMTR---DDLFNINAGIVRDL----ATAVAKACPKALILIISNPV  120 (310)
T ss_pred             CEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHH----HHHHHHhCCCeEEEEccCch
Confidence            999999997532 1  1232   33466665544444    4444433 367888888765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.12  E-value=0.43  Score=41.32  Aligned_cols=110  Identities=11%  Similarity=0.045  Sum_probs=66.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           20 TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+.|.|+ |.+|..++..|+.+|  ..|++++++++..+..+.++....   ...... .  .|.+       .    + 
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~~-------~----l-   65 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDYA-------D----C-   65 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCHH-------H----h-
Confidence            4788998 789999999999999  579999999887765444444321   111111 1  1211       1    1 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEec
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSS  155 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss  155 (266)
                      ...|++|.++|.....   ..+   ..+.+..|.    .+.+.+.+.+.+. ..|.+++++.
T Consensus        66 ~~aDiViita~~~~~~---~~~---r~dl~~~n~----~i~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          66 KGADVVVITAGANQKP---GET---RLDLLKRNV----AIFKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             CCCCEEEEccCCCCCC---CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            4589999999975321   112   223344443    4444455554443 3567777754

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.11  E-value=0.071  Score=42.24  Aligned_cols=44  Identities=30%  Similarity=0.337  Sum_probs=37.0

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN   56 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~   56 (266)
                      ....+.||++.|.|. |.||+++|+.|..-|++|+.++|......
T Consensus        30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            345789999999987 78999999999999999999999887544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.11  E-value=0.15  Score=44.88  Aligned_cols=74  Identities=19%  Similarity=0.226  Sum_probs=48.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC---ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGR---DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .|++++|+|+ +++|...+..+...|++|++++|   ++++.+ +++   +.|...    .|..+. ++.+    . +..
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~---~~Ga~~----v~~~~~-~~~~----~-~~~  236 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVE---ELGATY----VNSSKT-PVAE----V-KLV  236 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHH---HcCCEE----ecCCcc-chhh----h-hhc
Confidence            6899999986 99999999888888999999988   344433 333   334332    233322 2222    1 112


Q ss_pred             CCcccEEEecccc
Q 024551           94 DGKLNILVNNAAL  106 (266)
Q Consensus        94 ~~~id~lv~~ag~  106 (266)
                       +.+|++|.+.|.
T Consensus       237 -~~~d~vid~~g~  248 (355)
T cd08230         237 -GEFDLIIEATGV  248 (355)
T ss_pred             -CCCCEEEECcCC
Confidence             469999999983

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.10  E-value=0.21  Score=43.75  Aligned_cols=40  Identities=18%  Similarity=0.320  Sum_probs=33.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINE   57 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~   57 (266)
                      .|++++|+|+ +++|.+++..+...|++ |+.+++++++.+.
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~  200 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLAL  200 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            5889999975 99999999888889997 6778888877654

>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis]

Probab=95.07  E-value=0.93  Score=35.90  Aligned_cols=111  Identities=13%  Similarity=0.091  Sum_probs=71.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      .+.++=.|++||+-..........+.-.+.++-|+..++.+.+-.+.++.++..+++|+.+  +++.          +++
T Consensus        44 ~~i~lEIG~GSGvvstfL~~~i~~~~~~latDiNp~A~~~Tl~TA~~n~~~~~~V~tdl~~--~l~~----------~~V  111 (209)
T KOG3191|consen   44 PEICLEIGCGSGVVSTFLASVIGPQALYLATDINPEALEATLETARCNRVHIDVVRTDLLS--GLRN----------ESV  111 (209)
T ss_pred             ceeEEEecCCcchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhcCCccceeehhHHh--hhcc----------CCc
Confidence            4567778999998666555544445557788999999999998888888888888888753  2221          579


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLL  142 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m  142 (266)
                      |+++.|.++... +......+.++..+.--..|- .++..++|++
T Consensus       112 DvLvfNPPYVpt-~~~~i~~~~i~~a~aGG~~Gr-~v~d~ll~~v  154 (209)
T KOG3191|consen  112 DVLVFNPPYVPT-SDEEIGDEGIASAWAGGKDGR-EVTDRLLPQV  154 (209)
T ss_pred             cEEEECCCcCcC-CcccchhHHHHHHHhcCcchH-HHHHHHHhhh
Confidence            999999997532 233333444444444333332 2344444444

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.06  E-value=0.26  Score=42.01  Aligned_cols=106  Identities=13%  Similarity=0.218  Sum_probs=70.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHH-CCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~-~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +|++++|.||++..|.- +-+||+ .|+.|+...-+.++..-+..++   |...   ..|-.++.++.+++.+.   ++.
T Consensus       153 ~geTv~VSaAsGAvGql-~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~---G~d~---afNYK~e~~~~~aL~r~---~P~  222 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQL-VGQFAKLMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLSAALKRC---FPE  222 (343)
T ss_pred             CCCEEEEeeccchhHHH-HHHHHHhcCCEEEEecCChhhhhhhHhcc---CCcc---ceeccCccCHHHHHHHh---CCC
Confidence            68999999999999975 455665 6999998888887765555543   2221   12344444556665553   345


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI  160 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~  160 (266)
                      .||+.+-|.|..                          +..+.+..|+.  .|||+.-+-++.+.
T Consensus       223 GIDiYfeNVGG~--------------------------~lDavl~nM~~--~gri~~CG~ISqYN  259 (343)
T KOG1196|consen  223 GIDIYFENVGGK--------------------------MLDAVLLNMNL--HGRIAVCGMISQYN  259 (343)
T ss_pred             cceEEEeccCcH--------------------------HHHHHHHhhhh--ccceEeeeeehhcc
Confidence            699999999963                          22344555655  46999877655443

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=95.06  E-value=0.53  Score=41.53  Aligned_cols=79  Identities=19%  Similarity=0.198  Sum_probs=48.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ..+.+|+|+|+ +.||...+..+...|+. |+++++++++++...+..   +.....   +....    .....+.+...
T Consensus       167 ~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~---g~~~~~---~~~~~----~~~~~~~~~t~  235 (350)
T COG1063         167 RPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG---GADVVV---NPSED----DAGAEILELTG  235 (350)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhC---CCeEee---cCccc----cHHHHHHHHhC
Confidence            34458999998 66999987777788866 667788888876555533   212111   11111    22222222221


Q ss_pred             C-cccEEEeccc
Q 024551           95 G-KLNILVNNAA  105 (266)
Q Consensus        95 ~-~id~lv~~ag  105 (266)
                      + .+|++|-++|
T Consensus       236 g~g~D~vie~~G  247 (350)
T COG1063         236 GRGADVVIEAVG  247 (350)
T ss_pred             CCCCCEEEECCC
Confidence            3 5999999999

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.03  E-value=0.058  Score=45.94  Aligned_cols=40  Identities=30%  Similarity=0.453  Sum_probs=35.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .+++||+++|.|.|.-+|+-++..|.++|++|.++.+...
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~  193 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR  193 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC
Confidence            5689999999999999999999999999999988765443

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.00  E-value=0.24  Score=39.98  Aligned_cols=38  Identities=21%  Similarity=0.329  Sum_probs=31.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~   52 (266)
                      ..+++.+|+|.|+++ +|..+++.|+..|.. +.+++.+.
T Consensus        15 ~~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          15 NKLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             HHHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence            346788999998865 999999999999977 77777653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=94.96  E-value=0.21  Score=43.60  Aligned_cols=81  Identities=20%  Similarity=0.267  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-C
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-D   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~   94 (266)
                      +|++++|+|+ +++|.+++..+...|++ |+.+.+++++.+.+ +++   +.+. +  .|..+... ..+.+++.+.. +
T Consensus       162 ~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~---g~~~-v--i~~~~~~~-~~~~~~~~~~~~~  232 (343)
T cd05285         162 PGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KEL---GATH-T--VNVRTEDT-PESAEKIAELLGG  232 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHc---CCcE-E--eccccccc-hhHHHHHHHHhCC
Confidence            5899999864 79999998888888998 88888887765444 322   3221 1  12222211 00222222222 2


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      .++|+++.+.|.
T Consensus       233 ~~~d~vld~~g~  244 (343)
T cd05285         233 KGPDVVIECTGA  244 (343)
T ss_pred             CCCCEEEECCCC
Confidence            359999999884

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.96  E-value=0.24  Score=44.23  Aligned_cols=114  Identities=13%  Similarity=0.052  Sum_probs=70.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC-e----EE--E--ecCChhHHHHHHHHHHhcC-C---eeEEEeccCCCHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA-S----VH--T--CGRDQNMINERIQEWESKG-F---KVTGSVCDLSFGDQREKL   85 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~-~----v~--~--~~r~~~~~~~~~~~l~~~~-~---~~~~~~~D~~~~~~i~~~   85 (266)
                      =.+.|+|++|.+|.++|..|+.+|. .    +.  +  ++++++.++..+-+|.+.. .   ++.+ ..  .+.++    
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~y~~----  117 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DPYEV----  117 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CCHHH----
Confidence            3789999999999999999998873 3    33  4  4888888877777776532 1   1111 11  12111    


Q ss_pred             HHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh-c-CCCeEEEEecCC
Q 024551           86 IETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA-S-GNASIVFMSSVA  157 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~-~~g~iv~vss~~  157 (266)
                             + ..-|++|..||.... +  ..+..   +.++.|..    +.+...+.+.+ . ..+.||++|...
T Consensus       118 -------~-kdaDIVVitAG~prk-p--g~tR~---dll~~N~~----I~k~i~~~I~~~a~~~~iviVVsNPv  173 (387)
T TIGR01757       118 -------F-EDADWALLIGAKPRG-P--GMERA---DLLDINGQ----IFADQGKALNAVASKNCKVLVVGNPC  173 (387)
T ss_pred             -------h-CCCCEEEECCCCCCC-C--CCCHH---HHHHHHHH----HHHHHHHHHHHhCCCCeEEEEcCCcH
Confidence                   1 458999999997532 1  22322   34555544    45555565555 3 466777777543

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK07877 hypothetical protein; Provisional

Probab=94.95  E-value=0.18  Score=48.63  Aligned_cols=81  Identities=20%  Similarity=0.201  Sum_probs=52.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCCh------------------hHHHHHHHHHHhcC--CeeEE
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQ------------------NMINERIQEWESKG--FKVTG   71 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~------------------~~~~~~~~~l~~~~--~~~~~   71 (266)
                      ..+++++|+|.|+ | +|..++..|+..|.  ++.+++.+.                  .+.+..++.+.+..  .++..
T Consensus       103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~  180 (722)
T PRK07877        103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV  180 (722)
T ss_pred             HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence            4578999999999 4 99999999999995  677776533                  23444555555443  35555


Q ss_pred             EeccCCCHHHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           72 SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        72 ~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      +...++ +++++++++        ..|+||.|.-
T Consensus       181 ~~~~i~-~~n~~~~l~--------~~DlVvD~~D  205 (722)
T PRK07877        181 FTDGLT-EDNVDAFLD--------GLDVVVEECD  205 (722)
T ss_pred             EeccCC-HHHHHHHhc--------CCCEEEECCC
Confidence            555555 444444433        2566665543

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=94.94  E-value=0.19  Score=43.57  Aligned_cols=41  Identities=17%  Similarity=0.296  Sum_probs=34.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINER   58 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~   58 (266)
                      |.+++|.|+++++|.+++...... |++|+.+.+++++.+.+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l  190 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV  190 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence            889999999999999987666556 99999998887765444

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PLN02827 Alcohol dehydrogenase-like

Probab=94.93  E-value=0.27  Score=43.82  Aligned_cols=79  Identities=11%  Similarity=0.164  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH-HHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG-DQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~   94 (266)
                      .|++++|.|+ +++|..++..+...|++ |+.+++++++.+.. +++   |... +  .|..+. ++..+.+.++.   +
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l---Ga~~-~--i~~~~~~~~~~~~v~~~~---~  261 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF---GVTD-F--INPNDLSEPIQQVIKRMT---G  261 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCcE-E--EcccccchHHHHHHHHHh---C
Confidence            5899999986 89999998888888985 66777777765433 333   3322 1  233321 23333333332   2


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.+.|.
T Consensus       262 ~g~d~vid~~G~  273 (378)
T PLN02827        262 GGADYSFECVGD  273 (378)
T ss_pred             CCCCEEEECCCC
Confidence            369999999984

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.91  E-value=0.24  Score=42.77  Aligned_cols=111  Identities=14%  Similarity=0.052  Sum_probs=69.2

Q ss_pred             EEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCe---eEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           22 LVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFK---VTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        22 lItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|.|+ +.+|.+++..|+.+|  ..+++++++++.++....+|.+....   ..+...  .|.       +.+     ..
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~-------~~l-----~~   66 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY-------ADA-----AD   66 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH-------HHh-----CC
Confidence            57787 579999999999999  57999999999888888777654221   111111  111       111     35


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                      -|++|.++|.....   ..+..   +.+..|+    -+.+.+.+.+++. ..+.+++++...
T Consensus        67 aDiVIitag~p~~~---~~~R~---~l~~~n~----~i~~~~~~~i~~~~p~~~viv~sNP~  118 (300)
T cd00300          67 ADIVVITAGAPRKP---GETRL---DLINRNA----PILRSVITNLKKYGPDAIILVVSNPV  118 (300)
T ss_pred             CCEEEEcCCCCCCC---CCCHH---HHHHHHH----HHHHHHHHHHHHhCCCeEEEEccChH
Confidence            79999999975321   12222   2333443    4455555555554 367777777543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.91  E-value=0.068  Score=45.50  Aligned_cols=41  Identities=27%  Similarity=0.383  Sum_probs=36.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM   54 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~   54 (266)
                      .+++||.++|.|-|.-+|+-++..|..+|++|.++.+....
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~  195 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN  195 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC
Confidence            57899999999999999999999999999999988765443

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=94.91  E-value=0.22  Score=43.45  Aligned_cols=115  Identities=14%  Similarity=0.172  Sum_probs=67.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC-------eEEEecCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA-------SVHTCGRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+.|+|++|.+|.+++..|+.+|.       .+++++.++  +.++-.+.++.+....  . .-+..    +.   ....
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~--~-~~~~~----i~---~~~~   74 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP--L-LAGVV----AT---TDPE   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccc--c-cCCcE----Ee---cChH
Confidence            688999999999999999998884       689999865  3355555555432100  0 00110    00   0001


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--CCeEEEEec
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--NASIVFMSS  155 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~vss  155 (266)
                      +.+ ..-|++|..||....   ...+..   +.++.|..    +.+.+.+.+.+..  .+.++++|.
T Consensus        75 ~~~-~daDvVVitAG~~~k---~g~tR~---dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        75 EAF-KDVDAALLVGAFPRK---PGMERA---DLLSKNGK----IFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             HHh-CCCCEEEEeCCCCCC---CCCcHH---HHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            111 357999999997532   122333   34555544    4555566556553  567777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.88  E-value=0.18  Score=44.65  Aligned_cols=74  Identities=19%  Similarity=0.260  Sum_probs=48.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|.|+ +++|..++..+...|++|++++.+.++..+..+++   |....   .|-.+.+.       +.+.. +.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~v---i~~~~~~~-------~~~~~-~~  247 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADSF---LVSTDPEK-------MKAAI-GT  247 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcEE---EcCCCHHH-------HHhhc-CC
Confidence            6889999775 89999998888889999888877766554444433   33221   12233222       22222 35


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|++|.+.|
T Consensus       248 ~D~vid~~g  256 (360)
T PLN02586        248 MDYIIDTVS  256 (360)
T ss_pred             CCEEEECCC
Confidence            899999888

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.87  E-value=0.087  Score=44.86  Aligned_cols=40  Identities=20%  Similarity=0.309  Sum_probs=35.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .+++||.++|.|.|.-+|+-++..|.++|++|.++.....
T Consensus       154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~  193 (284)
T PRK14190        154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK  193 (284)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch
Confidence            4689999999999999999999999999999988765443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	266
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-81
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		4e-81
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-78
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-78
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-41
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		1e-34
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		2e-31
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		1e-30
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-29
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		7e-29
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-28
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		3e-28
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-28
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		3e-28
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		1e-27
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		1e-27
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-27
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		2e-27
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-27
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		4e-27
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		8e-27
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		1e-26
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		1e-26
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-26
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		5e-26
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		5e-26
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-26
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-25
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		2e-25
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-25
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-25
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		4e-25
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-25
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		9e-25
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		1e-24
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-24
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-24
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-24
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-24
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		4e-24
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		4e-24
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		5e-24
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		5e-24
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		6e-24
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		6e-24
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		6e-24
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		6e-24
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		7e-24
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		7e-24
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-23
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		2e-23
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-23
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-23
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		3e-23
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		5e-23
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		7e-23
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-22
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		1e-22
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-22
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-22
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-22
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-22
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-22
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		3e-22
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		3e-22
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		4e-22
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		4e-22
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		5e-22
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		5e-22
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		6e-22
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-21
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-21
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-21
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-21
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-21
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		2e-21
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-21
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		3e-21
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		4e-21
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		4e-21
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		5e-21
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		8e-21
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		9e-21
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-21
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		9e-21
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-20
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-20
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-20
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		2e-20
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-20
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		2e-20
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		2e-20
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-20
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		3e-20
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		5e-20
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-20
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		5e-20
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-20
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		6e-20
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		7e-20
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		7e-20
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		9e-20
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-19
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-19
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-19
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		2e-19
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-19
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-19
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-19
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		2e-19
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		3e-19
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		3e-19
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		4e-19
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		4e-19
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		5e-19
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		6e-19
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		6e-19
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		7e-19
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		7e-19
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		7e-19
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		8e-19
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		9e-19
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		9e-19
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		2e-18
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-18
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		4e-18
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		4e-18
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-18
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-18
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		9e-18
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		9e-18
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-17
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		1e-17
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		1e-17
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		1e-17
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		2e-17
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		3e-17
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		3e-17
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		4e-17
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		4e-17
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		7e-17
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		9e-17
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-16
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		2e-16
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		2e-16
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-16
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-16
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-16
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-16
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		2e-16
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		4e-16
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		4e-16
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		4e-16
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		5e-16
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		7e-16
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		9e-16
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		1e-15
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-15
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		2e-15
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		2e-15
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		4e-15
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		8e-15
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		9e-15
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-14
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-14
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		3e-14
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		1e-13
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		1e-13
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-13
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-13
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		2e-13
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		3e-13
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		3e-13
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		3e-13
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		5e-13
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		8e-13
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		1e-12
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		1e-12
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-12
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-12
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		3e-12
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		5e-12
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		7e-12
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		8e-12
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		1e-11
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		2e-11
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		2e-11
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		2e-11
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		2e-11
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		2e-11
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		3e-11
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		3e-11
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		5e-11
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		5e-11
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		6e-11
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		6e-11
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		6e-11
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		7e-11
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		7e-11
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		7e-11
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		7e-11
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		7e-11
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		7e-11
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		8e-11
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		8e-11
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		8e-11
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		8e-11
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		9e-11
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		9e-11
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		9e-11
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		9e-11
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		1e-10
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-10
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		2e-10
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-10
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		3e-10
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		3e-10
3nrc_A	280	Crystal Stucture Of The Francisella Tularensis Enoy		3e-10
2jjy_A	268	Crystal Structure Of Francisella Tularensis Enoyl R		4e-10
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		5e-10
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-10
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		6e-10
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		6e-10
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		6e-10
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		7e-10
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		7e-10
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		9e-10
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		1e-09
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		1e-09
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-09
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-09
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		2e-09
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-09
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		3e-09
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		3e-09
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		3e-09
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		4e-09
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		5e-09
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		5e-09
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		6e-09
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		7e-09
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		8e-09
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		9e-09
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		9e-09
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		9e-09
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		2e-08
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-08
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		3e-08
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		3e-08
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		3e-08
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		4e-08
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		4e-08
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		4e-08
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		4e-08
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		4e-08
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		4e-08
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		2e-07
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		2e-07
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		2e-07
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-07
3ek2_A	271	Crystal Structure Of Eonyl-(Acyl Carrier Protein) R		2e-07
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		3e-07
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-07
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		4e-07
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		5e-07
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		5e-07
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		5e-07
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		6e-07
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		6e-07
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		7e-07
1zmo_A	244	Apo Structure Of Haloalcohol Dehalogenase Hhea Of A		7e-07
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		8e-07
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		9e-07
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-06
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-06
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-06
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-06
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		2e-06
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		2e-06
3k2e_A	296	Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) R		2e-06
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		3e-06
1sny_A	267	Carbonyl Reductase Sniffer Of D. Melanogaster Lengt		3e-06
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		3e-06
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		3e-06
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		3e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		4e-06
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		1e-05
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		1e-05
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		1e-05
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		1e-05
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		2e-05
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		2e-05
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		2e-05
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		3e-05
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		3e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		4e-05
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		5e-05
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		5e-05
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		7e-05
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		7e-05
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		8e-05

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score =  298 bits (763), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 143/253 (56%), Positives = 190/253 (75%), Gaps = 5/253 (1%)
Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           ++WSL+  T LVTGGT+GIG+AIVEE A FGA +HTC R++  +NE + +W+ KGF+VTG
Sbjct: 8   QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTG 67
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           SVCD S   +REKL++TVSS+F GKL+IL+NN   +  K   +YT E++S  +STN+ES+
Sbjct: 68  SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESA 127
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           YHL QLAHPLLKASG  +I+FMSS+AG +S    S Y+A+KGA+NQL +NLACEWA+D I
Sbjct: 128 YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 187
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           R NAV+P  + T ++    +D    E+ K +I++ PL R  EP E+S LVAFLC+PAASY
Sbjct: 188 RANAVAPAVIATPLAEAVYDD----EFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY 243
Query: 251 ITGQVISIDGGYT 263
           ITGQ I +DGG T
Sbjct: 244 ITGQTICVDGGLT 256

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score =  297 bits (761), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 140/256 (54%), Positives = 194/256 (75%), Gaps = 2/256 (0%)
Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           + +WSL+G TALVTGG++GIGYAIVEELA  GA V+TC R++  ++E ++ W  KG  V 
Sbjct: 14  EGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE 73
Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
           GSVCDL    +R+KL++TV+ VFDGKLNILVNNA +V+ K A ++T ++Y+ +M TN E+
Sbjct: 74  GSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEA 133
Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           +YHL Q+A+PLLKAS N +++F+SS+AG  ++P +S Y+ASKGAINQ+TK+LACEWA D+
Sbjct: 134 AYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDN 193
Query: 191 IRVNAVSPWAVNTQISPPDL--NDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           IRVN+V+P  + T +    +  N    +E    I KTP+ R+ +P E+S L+AFLC PAA
Sbjct: 194 IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAA 253
Query: 249 SYITGQVISIDGGYTA 264
           SYITGQ+I  DGG+TA
Sbjct: 254 SYITGQIIWADGGFTA 269

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score =  288 bits (737), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 138/253 (54%), Positives = 186/253 (73%), Gaps = 1/253 (0%)
Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           +W+L G TALVTGG+RGIGY IVEELA  GASV+TC R+Q  +N+ + +W SKGFKV  S
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62
Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           VCDLS   +R++L+ TV++ F GKLNILVNNA +V+ K A +YT+E+YS +MS N E++Y
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122
Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           HL  LAHP LKAS   ++VF+SSV+GA+++P  + Y A+KGA++QLT+ LA EWA D+IR
Sbjct: 123 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 182
Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           VN V P  + T +    + D   +E + KLI +  L R  EP E++ +VAFLC PAASY+
Sbjct: 183 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 242
Query: 252 TGQVISIDGGYTA 264
           TGQ+I +DGG  A
Sbjct: 243 TGQIIYVDGGLMA 255

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 138/253 (54%), Positives = 186/253 (73%), Gaps = 1/253 (0%)
Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           +W+L G TALVTGG+RGIGY IVEELA  GASV+TC R+Q  +N+ + +W SKGFKV  S
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63
Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           VCDLS   +R++L+ TV++ F GKLNILVNNA +V+ K A +YT+E+YS +MS N E++Y
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 123
Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           HL  LAHP LKAS   ++VF+SSV+GA+++P  + Y A+KGA++QLT+ LA EWA D+IR
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183
Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           VN V P  + T +    + D   +E + KLI +  L R  EP E++ +VAFLC PAASY+
Sbjct: 184 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 243
Query: 252 TGQVISIDGGYTA 264
           TGQ+I +DGG  A
Sbjct: 244 TGQIIYVDGGLMA 256

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  165 bits (417), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 147/253 (58%), Gaps = 5/253 (1%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGS 72
           + LRG  ALVTGG+RG+G+ I + LA  G SV    R+    +E  Q+   K G +    
Sbjct: 17  FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 76
Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
            CD+S  ++ +KL+E V   F GKL+ +VN A +     A E+ L+E+  V+  N+  +Y
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 135
Query: 133 HLCQLAHPLLKASGNASIVFMSSVA-GAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           ++C+ A  LL+ S N SI+ + S+    +++P +SAYAASKG +  LTK LA EW    I
Sbjct: 136 YVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 195
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RVN ++P    T+++    +D    +Y  ++ + PL R+  P ++  +  FL    A Y+
Sbjct: 196 RVNVIAPGWYRTKMTEAVFSDPEKLDY--MLKRIPLGRTGVPEDLKGVAVFLASEEAKYV 253
Query: 252 TGQVISIDGGYTA 264
           TGQ+I +DGG+TA
Sbjct: 254 TGQIIFVDGGWTA 266

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score =  143 bits (360), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 139/251 (55%), Gaps = 28/251 (11%)
Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN----ERIQEWESKGFKVTGSV 73
           G   LVTGG+ GIG AI  + A  GA V   G D + ++     RI+  E          
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREE---------- 60
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D++   + ++L E +      +L++LVNNA   + +   EY L  +  V+  N+ ++  
Sbjct: 61  LDITDSQRLQRLFEALP-----RLDVLVNNAG--ISRDREEYDLATFERVLRLNLSAAML 113
Query: 134 LCQLAHPLLKASGNA--SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             QLA PLL   G +  +I  M S  G+   P   AY+ASKGAI QLT++LACE+A + I
Sbjct: 114 ASQLARPLLAQRGGSILNIASMYSTFGSADRP---AYSASKGAIVQLTRSLACEYAAERI 170
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RVNA++P  ++T +      D  V+   +++ +TPLAR  E  E++   AFLC P AS++
Sbjct: 171 RVNAIAPGWIDTPLGAGLKAD--VEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFV 228
Query: 252 TGQVISIDGGY 262
           TG V+++DGGY
Sbjct: 229 TGAVLAVDGGY 239

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 132/252 (52%), Gaps = 4/252 (1%)
Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           +++  L    ALVT  T GIG AI   LA+ GA V    R Q  ++  +   + +G  VT
Sbjct: 7   ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 66
Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVE 129
           G+VC +   + RE+L+    ++  G ++ILV+NAA+        + T E +  ++  NV+
Sbjct: 67  GTVCHVGKAEDRERLVAMAVNLHGG-VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVK 125
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           ++  + +   P ++  G  S++ +SSV      P L  Y  SK A+  LTKNLA E A  
Sbjct: 126 ATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 185
Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           +IRVN ++P  + T  S     D   +EY+K      + R   P + + +V+FLC   AS
Sbjct: 186 NIRVNCLAPGLIKTNFSQVLWMDKARKEYMK--ESLRIRRLGNPEDCAGIVSFLCSEDAS 243
Query: 250 YITGQVISIDGG 261
           YITG+ + + GG
Sbjct: 244 YITGETVVVGGG 255

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  129 bits (325), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 132/251 (52%), Gaps = 4/251 (1%)
Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           ++  L    ALVT  T GIG+AI   LA+ GA V    R Q  +++ +   + +G  VTG
Sbjct: 9   RRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTG 68
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVES 130
           +VC +   + RE+L+ T   +  G ++ILV+NAA+        + T E +   +  NV++
Sbjct: 69  TVCHVGKAEDRERLVATAVKLHGG-IDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKA 127
Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
              + +   P ++  G  S+V +SS+A     P  S Y  SK A+  LTK LA E A  +
Sbjct: 128 PALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRN 187
Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           IRVN ++P  + T  S     D   +E +K   +  + R  EP + + +V+FLC   ASY
Sbjct: 188 IRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLR--IRRLGEPEDCAGIVSFLCSEDASY 245
Query: 251 ITGQVISIDGG 261
           ITG+ + + GG
Sbjct: 246 ITGETVVVGGG 256

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 139/248 (56%), Gaps = 8/248 (3%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-INERIQEWESKGFKVTGSVC 74
           L+G TA+VTG +RG+G AI  +L   GA++   G   +  ++   +E+++ G  V  +  
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+   +  E +++T    F G+++ILVNNA +       + + +++  V++TN++S+Y  
Sbjct: 63  DVKNPEDVENMVKTAMDAF-GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLC 121
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +    ++    +  I+ ++S+AG I     + YAASK  +   TK++A E+A   I  N
Sbjct: 122 TKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCN 181
Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKL-IAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           AV+P  + T     D+ D+L  +  ++ +   PL R   P E++ +V FL    ++YITG
Sbjct: 182 AVAPGIIKT-----DMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITG 236
Query: 254 QVISIDGG 261
           QVI+IDGG
Sbjct: 237 QVINIDGG 244

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 138/262 (52%), Gaps = 9/262 (3%)
Query: 9   FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK 68
           F   ++SL+G  ALVTG + GIG+AI    A+ GA++     +Q +++  +  +++ G  
Sbjct: 25  FSLDQFSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGIN 84
Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
             G VCD++  D  + ++  + S   G ++ILVNNA ++      E T  ++  V+  ++
Sbjct: 85  AHGYVCDVTDEDGIQAMVAQIESEV-GIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDL 143
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            + + + +   P +   G+  I+ + S+   +    +SAYAA+KG +  LTKN+A E+  
Sbjct: 144 NAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGE 203
Query: 189 DSIRVNAVSPWAVNTQISPP------DLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
            +I+ N + P  + T  + P      D +     +++  IAKTP AR  E  ++     F
Sbjct: 204 ANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFI--IAKTPAARWGEAEDLMGPAVF 261
Query: 243 LCLPAASYITGQVISIDGGYTA 264
           L   A++++ G ++ +DGG  A
Sbjct: 262 LASDASNFVNGHILYVDGGILA 283

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 135/257 (52%), Gaps = 25/257 (9%)
Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G   LVTGG RGIG AI +  AR GA V  C  D     + + E       + G+   + 
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALC--DLRPEGKEVAE------AIGGAFFQVD 57
Query: 78  FGDQREKL--IETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
             D+RE++  +E  +    G++++LVNNAA+     A    L E+  V+  N+ +  HL 
Sbjct: 58  LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116
Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
            LA   ++  G  +IV ++SV G  +    +AY ASKG +  LT++LA + A   IRVNA
Sbjct: 117 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176
Query: 196 VSPWAVNTQ-------ISP-PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
           V+P A+ T+       +SP P+      +++  L A   L R  +P E++  V FL    
Sbjct: 177 VAPGAIATEAVLEAIALSPDPERTR---RDWEDLHA---LRRLGKPEEVAEAVLFLASEK 230
Query: 248 ASYITGQVISIDGGYTA 264
           AS+ITG ++ +DGG TA
Sbjct: 231 ASFITGAILPVDGGMTA 247

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 20/249 (8%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTGG+RGIG AI E L   G  V    R+         E  ++         DL   D
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNP--------EEAAQSLGAVPLPTDLEKDD 56
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
            +  +   + ++  G L++LV+ AA+ V K A E + EE+  V+  +++ ++ L Q A P
Sbjct: 57  PKGLVKRALEAL--GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAP 114
Query: 141 LLKASGNASIVFMSSV-----AGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
            +  +G   ++F+ SV      G + IP   AY  +K A+  LT+ LA EWA   IRVN 
Sbjct: 115 HMAEAGWGRVLFIGSVTTFTAGGPVPIP---AYTTAKTALLGLTRALAKEWARLGIRVNL 171
Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           + P  V T+ + P   +   + Y  + A+ P+ R A P EI+ + A LC   A Y+TGQ 
Sbjct: 172 LCPGYVETEFTLPLRQN--PELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQA 229
Query: 256 ISIDGGYTA 264
           +++DGG+ A
Sbjct: 230 VAVDGGFLA 238

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 132/255 (51%), Gaps = 9/255 (3%)
Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV 69
           G    +L    A+VTG +RGIG AI  ELAR GA V      +         ++  G + 
Sbjct: 20  GSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEG 79
Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
            G+V +++     + L+E+    F G LN+LVNNA +   + A     +E+ +V+ TN++
Sbjct: 80  RGAVLNVNDATAVDALVESTLKEF-GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLK 138
Query: 130 SSYHLCQ-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           + + L + +  P++KA G   IV ++SV G+   P    YAA+K  +  +T+ LA E  +
Sbjct: 139 AVFRLSRAVLRPMMKARG-GRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGS 197
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
             I VN V+P  ++T     D+   L QE    L  + PL R   P +I+  VAFL  P 
Sbjct: 198 RGITVNCVAPGFIDT-----DMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQ 252
Query: 248 ASYITGQVISIDGGY 262
           A YITG  + ++GG 
Sbjct: 253 AGYITGTTLHVNGGM 267

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 10/255 (3%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           + L G TALVTG  RG+G+A  E LA  GA V        ++ E +     KG+   G  
Sbjct: 5   FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVA 64
Query: 74  CDLSFGDQREKLIETVSSVFDGK---LNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
            D++     E  IE   S  D +   ++IL+NNA +   K   E  LE +  V+ TN+ S
Sbjct: 65  FDVT----DELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTS 120
Query: 131 SYHLCQ-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           ++ + +  A  ++  +    I+ + S+    + P ++ Y A+KG I  LT ++A EWA  
Sbjct: 121 AFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQF 180
Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           +I+ NA+ P  + T ++   + D     +VK  + TP  R   P E+     FL   A+ 
Sbjct: 181 NIQTNAIGPGYILTDMNTALIEDKQFDSWVK--SSTPSQRWGRPEELIGTAIFLSSKASD 238
Query: 250 YITGQVISIDGGYTA 264
           YI GQ+I +DGG+ A
Sbjct: 239 YINGQIIYVDGGWLA 253

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 130/250 (52%), Gaps = 7/250 (2%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           + L G TALVTG +RG+G A+ E LA  GA +   G D + + + +QE+ + G       
Sbjct: 22  FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVA 81
Query: 74  CDLSFGDQREKLIETVSSVFDG--KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
            D++      ++IE  + + +    ++ILVNNA +   K   E    ++  V+ TN+ S+
Sbjct: 82  FDVT---SESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSA 138
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           + + + A   +   G   IV + S+   ++   ++ Y  +KG I  LT+ +A EWA   I
Sbjct: 139 FMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGI 198
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           + NA+ P  + T ++   +++     +VK  A+TP  R  +P E+     FL   A+ Y+
Sbjct: 199 QANAIGPGYMLTDMNQALIDNPEFDAWVK--ARTPAKRWGKPQELVGTAVFLSASASDYV 256
Query: 252 TGQVISIDGG 261
            GQ+I +DGG
Sbjct: 257 NGQIIYVDGG 266

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A++TGGT GIG AI  +    GA V   GR  + + E+  +      ++     D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSD-VGEKAAKSVGTPDQIQFFQHD 62
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
            S  D   KL +     F G ++ LVNNA + V K   E T  E+  +++ N++  +   
Sbjct: 63  SSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 136 QLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN--LACEWATDSIR 192
           +L    +K  G  ASI+ MSS+ G +  P L AY ASKGA+  ++K+  L C      +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 193 VNAVSPWAVNTQISPPDLNDLL-VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           VN V P  + T    P ++DL   +E +    KTP+    EPN+I+ +  +L    + + 
Sbjct: 182 VNTVHPGYIKT----PLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA 237
Query: 252 TGQVISIDGGYTA 264
           TG    +DGGYTA
Sbjct: 238 TGSEFVVDGGYTA 250

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 127/260 (48%), Gaps = 24/260 (9%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A++TGGT GIG AI  +    GA V        MI +R  +   K  K  G+   
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKV--------MITDRHSDVGEKAAKSVGTPDQ 55
Query: 76  LSF-------GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
           + F        D   KL +     F G ++ LVNNA + V K   E T  E+  +++ N+
Sbjct: 56  IQFFQHDSSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNL 114
Query: 129 ESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN--LACE 185
           +  +   +L    +K  G  ASI+ MSS+ G +  P L AY ASKGA+  ++K+  L C 
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLL-VQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
                +RVN V P  + T    P ++DL   +E +    KTP+    EPN+I+ +  +L 
Sbjct: 175 LKDYDVRVNTVHPGYIKT----PLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLA 230
Query: 245 LPAASYITGQVISIDGGYTA 264
              + + TG    +DGGYTA
Sbjct: 231 SNESKFATGSEFVVDGGYTA 250

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 134/248 (54%), Gaps = 16/248 (6%)
Query: 20  TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKG---FKVTGSVC 74
           +ALVTG +RGIG +I  +LA  G   +V+  G  +      ++E ++KG   F +  +V 
Sbjct: 12  SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKA-EAVVEEIKAKGVDSFAIQANVA 70
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D    D+ + +I+ V S F G L++LVNNA +           +E+  V+ TN++  ++ 
Sbjct: 71  D---ADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNC 126
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q A P +    + +I+ +SSV GA+  P  + Y A+K  +  LTK+ A E A+  I VN
Sbjct: 127 IQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 186
Query: 195 AVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           AV+P  +       D+ D L  E   +++ + PLAR  +  +I+  VAFL    A YITG
Sbjct: 187 AVAPGFI-----VSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITG 241
Query: 254 QVISIDGG 261
           Q I ++GG
Sbjct: 242 QTIHVNGG 249

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           + L G  AL+TG + GIG  +    A  GA V    R  + +     E    G K     
Sbjct: 28  FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIR 87
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CD++  DQ   +++ ++    G ++I V NA +V ++   +  LEE+  +  TNV   + 
Sbjct: 88  CDVTQPDQVRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFL 146
Query: 134 LCQLAHPLLKASG-NASIVFMSSVAGAI-SIPR-LSAYAASKGAINQLTKNLACEWATDS 190
             Q A   +   G   +I+  +S++G I +IP+ +S Y  SK A+  LTK +A E A   
Sbjct: 147 TAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQ 206
Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           IRVN+VSP  + T++  P     L   +     K PL R   P E++ L  +L   A+SY
Sbjct: 207 IRVNSVSPGYIRTELVEP-----LADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSY 261
Query: 251 ITGQVISIDGGYT 263
           +TG  I IDGGYT
Sbjct: 262 MTGSDIVIDGGYT 274

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 7/251 (2%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE-----SKGFKVT 70
           L+G  A+VTGG  GIG AIV+EL   G++V    R    +     E +     +K  +V 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
              C++   ++   L+++    F GK+N LVNN     +  A   + + + +V+ TN+  
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 134
Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           ++++C+  +         SIV +  V      P      A++  +  LTK+LA EWA   
Sbjct: 135 TFYMCKAVYSSWMKEHGGSIVNII-VPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSG 193
Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           IR+N V+P  + +Q +  +        +     K P  R   P E+S +V FL  PAAS+
Sbjct: 194 IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF 253
Query: 251 ITGQVISIDGG 261
           ITGQ + +DGG
Sbjct: 254 ITGQSVDVDGG 264

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score =  117 bits (292), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 132/252 (52%), Gaps = 7/252 (2%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           +SL G TA+VTG   GIG AI    AR GA V   GR    + E   E    G      V
Sbjct: 27  FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVV 85
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DL+  +    + E +++    ++++LVNNA ++    A E +L  +  V++ N+++++ 
Sbjct: 86  ADLADLEGAANVAEELAATR--RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWV 143
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +     + A G+  IV ++S+        ++AYAASK A+  LT+ LA EWA   + V
Sbjct: 144 LSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGV 203
Query: 194 NAVSP-WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           NA++P + V    +    +D   +   ++ A+ P  R A P ++     FL   AASY+ 
Sbjct: 204 NALAPGYVVTANTAALRADD---ERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVH 260
Query: 253 GQVISIDGGYTA 264
           GQV+++DGG+ A
Sbjct: 261 GQVLAVDGGWLA 272

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 132/255 (51%), Gaps = 18/255 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS-VC 74
           L G  A VTG   GIG  I    A  GA +    R+   ++   QE    G  V    V 
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE---LGAAVAARIVA 65
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  D          +     ++ILVN+A +  +  A E     +  VM+ NV+  +  
Sbjct: 66  DVT--DAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWA 123
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAI-SIPRL-SAYAASKGAINQLTKNLACEWATDSIR 192
            +     + A G  +IV + S++G I + P+  S+Y ASKGA++QLT+ LA EWA   +R
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVR 183
Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKL----IAKTPLARSAEPNEISPLVAFLCLPAA 248
           VNA++P  V T+++      L ++E  +L    +  TP+ R  EP+EI+    FL  PAA
Sbjct: 184 VNALAPGYVATEMT------LKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAA 237
Query: 249 SYITGQVISIDGGYT 263
           SY+TG ++++DGGYT
Sbjct: 238 SYVTGAILAVDGGYT 252

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 135/260 (51%), Gaps = 16/260 (6%)
Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           +K  L    A+VTGG + IG A V  LA  GA V     D+ M  + +++   +G  V+ 
Sbjct: 7   EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSS 66
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK-RATEYTLEEYSSVMSTNVES 130
            V D++  +  +  + +V    +G+++ILV  A + + + +A + T  ++   +  N+  
Sbjct: 67  VVMDVTNTESVQNAVRSVHE-QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNG 125
Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAI--SIPRLSAYAASKGAINQLTKNLACEWAT 188
            +  CQ    ++       IV + S++G I     + +AY ASK  ++Q  ++LA EWA 
Sbjct: 126 MFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAP 185
Query: 189 DSIRVNAVSPWAVNTQIS-----PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL 243
             IR NAV+P  + T ++      P+L       Y   IA TP+ R  +P+E++ +V FL
Sbjct: 186 HGIRANAVAPTYIETTLTRFGMEKPEL-------YDAWIAGTPMGRVGQPDEVASVVQFL 238
Query: 244 CLPAASYITGQVISIDGGYT 263
              AAS +TG ++++D G+T
Sbjct: 239 ASDAASLMTGAIVNVDAGFT 258

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 129/248 (52%), Gaps = 8/248 (3%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
            +L G  ALVTG +RGIG AI E LA  GA V      ++   + I ++     K  G  
Sbjct: 8   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDYLGDNGK--GMA 64
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            +++  +  E +++ ++  F G ++ILVNNA +           EE+S +M TN+ S + 
Sbjct: 65  LNVTNPESIEAVLKAITDEFGG-VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +     +       I+ + SV G +     + YAA+K  +   TK++A E A+  + V
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N V+P A+ T ++   LND   ++    +A+ P  R  +P EI+  VAFL  P A+YITG
Sbjct: 184 NTVAPGAIETDMTKA-LND---EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITG 239
Query: 254 QVISIDGG 261
           + + ++GG
Sbjct: 240 ETLHVNGG 247

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score =  114 bits (285), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 131/256 (51%), Gaps = 10/256 (3%)
Query: 9   FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ-EWESKGF 67
           F        G   L+TG ++GIG  I + LA  G  V    R    + + ++ E E KG+
Sbjct: 20  FQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGY 79
Query: 68  KVTGSVCDLSFGDQREKLIETVSSVF--DGKLNILVNNAALVVMKRATEYTLEEYSSVMS 125
           K      D +        IE + ++   DG L+ LVNNA +V  K A +   E++  V+ 
Sbjct: 80  KAAVIKFDAA---SESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136
Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            N+ S++  C+ A  ++  S   S+V ++S+ G       + Y+ASKG +  ++K+ A E
Sbjct: 137 NNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYE 196
Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
            A  +IR N+V+P  + T ++  +L D L  +YVK I   PL R     E++  VAFL  
Sbjct: 197 GALRNIRFNSVTPGFIETDMN-ANLKDELKADYVKNI---PLNRLGSAKEVAEAVAFLLS 252
Query: 246 PAASYITGQVISIDGG 261
             +SYITG+ + ++GG
Sbjct: 253 DHSSYITGETLKVNGG 268

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  114 bits (285), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 131/248 (52%), Gaps = 8/248 (3%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV--HTCGRDQNMINERIQEWESKGFKVTGSV 73
           L+G  ALVTG +RGIG AI  +LA+ GA+V  +  G +Q   NE + E +  G       
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKA-NEVVDEIKKLGSDAIAVR 60
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D++  +    +++    VF G+++ILVNNA +           EE+ +V++TN++  + 
Sbjct: 61  ADVANAEDVTNMVKQTVDVF-GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFL 119
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
             +     +    +  IV ++SV G    P  + Y A+K  +  LTK  A E A+ +I V
Sbjct: 120 CTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NA++P  + T ++   L++ +  E +KLI   P A+  E  +I+  V F     + YITG
Sbjct: 180 NAIAPGFIATDMTDV-LDENIKAEMLKLI---PAAQFGEAQDIANAVTFFASDQSKYITG 235
Query: 254 QVISIDGG 261
           Q +++DGG
Sbjct: 236 QTLNVDGG 243

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 129/248 (52%), Gaps = 8/248 (3%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
            +L G  ALVTG +RGIG AI E LA  GA V      ++   + I ++     K  G  
Sbjct: 8   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDYLGDNGK--GMA 64
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            +++  +  E +++ ++  F G ++ILVNNAA+           EE+S +M TN+ S + 
Sbjct: 65  LNVTNPESIEAVLKAITDEFGG-VDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +     +       I+ + SV G +     + YAA+K  +   TK++A E A+  + V
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N V+P  + T ++   LND   ++    +A+ P  R  +P EI+  VAFL  P A+YITG
Sbjct: 184 NTVAPGFIETDMTKA-LND---EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITG 239
Query: 254 QVISIDGG 261
           + + ++GG
Sbjct: 240 ETLHVNGG 247

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 137/250 (54%), Gaps = 20/250 (8%)
Query: 20  TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKG---FKVTGSVC 74
           +ALVTG +RGIG +I  +LA  G   +V+  G  +      ++E ++KG   F +  +V 
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKA-EAVVEEIKAKGVDSFAIQANVA 64
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALV---VMKRATEYTLEEYSSVMSTNVESS 131
           D    D+ +  I+ V S F G L++LVNNA +    ++ R  E   +E+  V+ TN++  
Sbjct: 65  D---ADEVKAXIKEVVSQF-GSLDVLVNNAGITRDNLLXRXKE---QEWDDVIDTNLKGV 117
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           ++  Q A P      + +I+ +SSV GA+  P  + Y A+K  +  LTK+ A E A+  I
Sbjct: 118 FNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGI 177
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
            VNAV+P  + +  +   L+D L ++ +  I   PLAR  +  +I+  VAFL    A YI
Sbjct: 178 TVNAVAPGFIVSDXTDA-LSDELKEQXLTQI---PLARFGQDTDIANTVAFLASDKAKYI 233
Query: 252 TGQVISIDGG 261
           TGQ I ++GG
Sbjct: 234 TGQTIHVNGG 243

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 128/248 (51%), Gaps = 8/248 (3%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
            +L G  ALVTG +RGIG AI E LA  GA V      ++   + I ++     K  G  
Sbjct: 8   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDYLGDNGK--GMA 64
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            +++  +  E +++ ++  F G ++ILVNNA +           EE+S +M TN+ S + 
Sbjct: 65  LNVTNPESIEAVLKAITDEFGG-VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +     +       I+ + SV G +     + YAA+K  +   TK++A E A+  + V
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N V+P  + T ++   LND   ++    +A+ P  R  +P EI+  VAFL  P A+YITG
Sbjct: 184 NTVAPGFIETDMTKA-LND---EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITG 239
Query: 254 QVISIDGG 261
           + + ++GG
Sbjct: 240 ETLHVNGG 247

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 130/247 (52%), Gaps = 6/247 (2%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVC 74
           L+G  +LVTG TRGIG AI E+LA  G++V   G          +E  +K G K  G   
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           +L   +   K  E + ++ DG ++ILVNNA +   K     +L ++  V+  N+  ++ +
Sbjct: 65  NLLSEESINKAFEEIYNLVDG-IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLV 123
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q +   +       IV +SSV G         Y+ +K  +   TK+LA E A  ++ VN
Sbjct: 124 TQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVN 183
Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           AV+P  + T ++   L++ + Q+Y + I   PL R   P E++ +V FLC   ASYITG+
Sbjct: 184 AVAPGFIETDMTAV-LSEEIKQKYKEQI---PLGRFGSPEEVANVVLFLCSELASYITGE 239
Query: 255 VISIDGG 261
           VI ++GG
Sbjct: 240 VIHVNGG 246

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 128/248 (51%), Gaps = 8/248 (3%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
            +L G  ALVTG +RGIG AI E LA  GA V      ++   + I ++     K  G  
Sbjct: 8   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDYLGDNGK--GMA 64
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            +++  +  E +++ ++  F G ++ILVNNA +           EE+S +M TN+ S + 
Sbjct: 65  LNVTNPESIEAVLKAITDEFGG-VDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +     +       I+ + SV G +     + YAA+K  +   TK++A E A+  + V
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N V+P  + T ++   LND   ++    +A+ P  R  +P EI+  VAFL  P A+YITG
Sbjct: 184 NTVAPGFIETDMTKA-LND---EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITG 239
Query: 254 QVISIDGG 261
           + + ++GG
Sbjct: 240 ETLHVNGG 247

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 7/197 (3%)
Query: 66  GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMS 125
           G K  G  C+++    RE +I+     F GK+ +LVNNA      +  +  + ++     
Sbjct: 60  GGKAIGLECNVTDEQHREAVIKAALDQF-GKITVLVNNAG-GGGPKPFDMPMSDFEWAFK 117
Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            N+ S + L QLA P ++ +G  +I+ +SS+AG  +  R+++Y +SK A+N LT+N+A +
Sbjct: 118 LNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFD 177
Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLC 244
                IRVNA++P A+ T      L  +L  E  + ++  TPL R  E  +I+    FLC
Sbjct: 178 VGPMGIRVNAIAPGAIKTDA----LATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLC 233
Query: 245 LPAASYITGQVISIDGG 261
            PAA++I+GQV+++ GG
Sbjct: 234 SPAAAWISGQVLTVSGG 250

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 128/248 (51%), Gaps = 8/248 (3%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
            +L G  ALVTG +RGIG AI E LA  GA V      ++   + I ++     K  G  
Sbjct: 8   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDYLGDNGK--GMA 64
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            +++  +  E +++ ++  F G ++ILVNNA +           EE+S +M TN+ S + 
Sbjct: 65  LNVTNPESIEAVLKAITDEFGG-VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +     +       I+ + SV G +     + +AA+K  +   TK++A E A+  + V
Sbjct: 124 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N V+P  + T ++   LND   ++    +A+ P  R  +P EI+  VAFL  P A+YITG
Sbjct: 184 NTVAPGFIETDMTKA-LND---EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITG 239
Query: 254 QVISIDGG 261
           + + ++GG
Sbjct: 240 ETLHVNGG 247

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 124/257 (48%), Gaps = 10/257 (3%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L+G TALVTG T GIG  I + LAR GA++   G         + E    G K      
Sbjct: 1   TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPA 58
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DLS   Q E L       F G ++ILVNNA +  +    ++ LE +  +++ N+ + +H 
Sbjct: 59  DLSDVAQIEALFALAEREFGG-VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHG 117
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +LA P ++A     I+ ++SV G +     +AY A+K  +  LTK +  E AT ++  N
Sbjct: 118 TRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCN 177
Query: 195 AVSP-WA----VNTQISPPDLN--DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
           A+ P W     V  QI     N  D L  ++  L  K P      P  +  LV FLC  A
Sbjct: 178 AICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEA 237
Query: 248 ASYITGQVISIDGGYTA 264
            S + G   ++DGG+ A
Sbjct: 238 GSQVRGAAWNVDGGWLA 254

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 24/259 (9%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L+G  ALVTG +RGIG AI + LA  GA  ++H   R +    E + E +S G    GS 
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA-EETVYEIQSNG----GSA 59
Query: 74  CDLSFGDQREKL--IETVSSVFDG---------KLNILVNNAALVVMKRATEYTLEEYSS 122
              S G   E L  +E + S  D          K +IL+NNA +       E T + +  
Sbjct: 60  --FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDR 117
Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
            +S N ++ + + Q A   L+   N+ I+ +SS A  IS+P   AY+ +KGAIN  T  L
Sbjct: 118 XVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRISLPDFIAYSXTKGAINTXTFTL 175
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A +     I VNA+ P  V T  +   L+D   ++Y   I  +   R  E  +I+   AF
Sbjct: 176 AKQLGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTI--SAFNRLGEVEDIADTAAF 233
Query: 243 LCLPAASYITGQVISIDGG 261
           L  P + ++TGQ+I + GG
Sbjct: 234 LASPDSRWVTGQLIDVSGG 252

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 3   EAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW 62
           E+AEP      + L   + LVTGGT+GIG  I    AR GA+V    R    ++    E 
Sbjct: 26  ESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAEL 85
Query: 63  ESKGF-KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS 121
              G   V G   D+S          TV   F G L+++  NA +    R    T E+ S
Sbjct: 86  GELGAGNVIGVRLDVSDPGSCADAARTVVDAF-GALDVVCANAGIFPEARLDTMTPEQLS 144
Query: 122 SVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-IPRLSAYAASKGAINQLTK 180
            V+  NV+ + +  Q     L ASG   ++  SS+ G ++  P  S Y ASK A     +
Sbjct: 145 EVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMR 204
Query: 181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-PLARSAEPNEISPL 239
             A E A   + VNA+ P  + T+     L D + +EY+  +A++ P+     P +I  L
Sbjct: 205 TAAIELAPRGVTVNAILPGNILTE----GLVD-MGEEYISGMARSIPMGMLGSPVDIGHL 259
Query: 240 VAFLCLPAASYITGQVISIDGG 261
            AFL    A YITGQ I +DGG
Sbjct: 260 AAFLATDEAGYITGQAIVVDGG 281

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 16/253 (6%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG T GIG  I   L + G  V  C R +  +   ++E    G +  G  CD+    
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           + E L+  V   + G +++LVNNA  +      E   E +  V+ TN+   + + +    
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTK---Q 144
Query: 141 LLKAS-----GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +LKA      G   IV ++S  G   +   + Y+ASK  +   TK L  E A   I VNA
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 196 VSPWAVNTQISP------PDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  V T ++        D+ ++  +E + ++ A+ P+ R  +P+E++ +VA+L  P A
Sbjct: 205 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 249 SYITGQVISIDGG 261
           + +T Q +++ GG
Sbjct: 265 AAVTAQALNVCGG 277

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 16/253 (6%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG T GIG  I   L + G  V  C R +  +   ++E    G +  G  CD+    
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           + E L+  V   + G +++LVNNA  +      E   E +  V+ TN+   + + +    
Sbjct: 85  EIEALVAAVVERY-GPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTK---Q 140
Query: 141 LLKAS-----GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +LKA      G   IV ++S  G   +   + Y+ASK  +   TK L  E A   I VNA
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 200
Query: 196 VSPWAVNTQISP------PDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  V T ++        D+ ++  +E + ++ A+ P+ R  +P+E++ +VA+L  P A
Sbjct: 201 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 260
Query: 249 SYITGQVISIDGG 261
           + +T Q +++ GG
Sbjct: 261 AAVTAQALNVCGG 273

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 123/253 (48%), Gaps = 13/253 (5%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGS 72
           + L+G + +VTGGT+GIG  I    AR GA+V   GR    I+  + + +  G  KV G 
Sbjct: 6   FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65
Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             D+S   Q + L       F G ++++  NA +         T E+ + + + NV  ++
Sbjct: 66  QTDVSDRAQCDALAGRAVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTF 124
Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAIS-IPRLSAYAASKGAINQLTKNLACEWATDSI 191
           +  Q     L ASG+  +V  SS+ G I+  P  S Y A+K A     +  A E A   I
Sbjct: 125 YAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKI 184
Query: 192 RVNAVSPWAVNTQISPPDLNDLL--VQEYVKLIAKT-PLARSAEPNEISPLVAFLCLPAA 248
            VNA+ P  + T+        LL   +EY+  +A++ P      P +I  L AFL    A
Sbjct: 185 TVNAIMPGNIMTE-------GLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEA 237
Query: 249 SYITGQVISIDGG 261
            YITGQ I++DGG
Sbjct: 238 GYITGQAIAVDGG 250

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 18/248 (7%)
Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           + LVTGG RGIG AI    A  G        D+  I  R  E   +GF      CD++  
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAG--------DKVAITYRSGE-PPEGFLAVK--CDITDT 71
Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           +Q E+  + +     G + +L+ NA +   +     + E+++SV+ TN+  ++ + + A+
Sbjct: 72  EQVEQAYKEIEETH-GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRAN 130
Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
             +  +    +V +SSV G +     + YAASK  +    ++LA E  + +I  N V+P 
Sbjct: 131 RAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPG 190
Query: 200 AVNTQISPPDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISI 258
            V+T     D+  +L  E    ++++ PL R A P EI+  V FL    ASYITG VI +
Sbjct: 191 FVDT-----DMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPV 245
Query: 259 DGGYTAGN 266
           DGG   G+
Sbjct: 246 DGGLGMGH 253

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 121/254 (47%), Gaps = 9/254 (3%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           +SL G  ALVTGG+RGIG  I + L   GA V  C RD     +      + G       
Sbjct: 25  FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIP 83
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DLS      +L + +      +L+ILVNNA          Y +  +  VM  NV S + 
Sbjct: 84  ADLSSEAGARRLAQALGE-LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFS 142
Query: 134 LCQLAHPLLKASGNAS----IVFMSSVAGAISIPRLS-AYAASKGAINQLTKNLACEWAT 188
             Q   PLL+ S +A     ++ + SVAG  ++   + AY  SK A++QL++ LA E   
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVG 202
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           + I VN ++P    ++++    ND    E     A  P+ R   P E++ L   L   A 
Sbjct: 203 EHINVNVIAPGRFPSRMTRHIANDPQALEADS--ASIPMGRWGRPEEMAALAISLAGTAG 260
Query: 249 SYITGQVISIDGGY 262
           +Y+TG VI IDGG+
Sbjct: 261 AYMTGNVIPIDGGF 274

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 128/257 (49%), Gaps = 35/257 (13%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-WESKGFKVTGSVCDLSFGD 80
           LVTGG++GIG A+VE L +         ++  +IN  IQ+ + ++  K   +  DL+   
Sbjct: 8   LVTGGSKGIGKAVVELLLQ--------NKNHTVINIDIQQSFSAENLKFIKA--DLTKQQ 57
Query: 81  QREKLIETVSSV-FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
               +++ + +V FDG    +  NA +++     +  +E    V+  NV SS +  +   
Sbjct: 58  DITNVLDIIKNVSFDG----IFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLE 113
Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
             LK    ASIVF  S    I+ P   AY  SKGAI Q TK+LA + A   IRVN V P 
Sbjct: 114 NNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPG 171
Query: 200 AVNTQISPPDLNDLLVQEYVKLIA------------KTPLARSAEPNEISPLVAFLCLPA 247
            V+T     DL   L+Q+Y   +             + PL R A+P EI+ LV FL    
Sbjct: 172 TVDT-----DLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK 226
Query: 248 ASYITGQVISIDGGYTA 264
           + + TG +I IDGGYTA
Sbjct: 227 SKFXTGGLIPIDGGYTA 243

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 16/253 (6%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG T GIG  I   L + G  V  C R +  +   ++E    G +  G  CD+    
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           + E L+  V   + G +++LVNNA         E   E +  V+ TN+   + + +    
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 144
Query: 141 LLKAS-----GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +LKA      G   IV ++S  G   +   + Y+ASK  +   TK L  E A   I VNA
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 196 VSPWAVNTQISP------PDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  V T ++        D+ ++  +E + ++ A+ P+ R  +P+E++ +VA+L  P A
Sbjct: 205 VCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 249 SYITGQVISIDGG 261
           + +T Q +++ GG
Sbjct: 265 AAVTAQALNVCGG 277

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 16/253 (6%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG T GIG  I   L + G  V  C R +  +   ++E    G +  G  CD+    
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 68
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           + E L+  V   + G +++LVNNA         E   E +  V+ TN+   + + +    
Sbjct: 69  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 124
Query: 141 LLKAS-----GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +LKA      G   IV ++S  G   +   + Y+ASK  +   TK L  E A   I VNA
Sbjct: 125 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 184
Query: 196 VSPWAVNTQISP------PDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  V T ++        D+ ++  +E + ++ A+ P+ R  +P+E++ +VA+L  P A
Sbjct: 185 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 244
Query: 249 SYITGQVISIDGG 261
           + +T Q +++ GG
Sbjct: 245 AAVTAQALNVCGG 257

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 16/253 (6%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG T GIG  I   L + G  V  C R +  +   ++E    G +  G  CD+    
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           + E L+  V   + G +++LVNNA         E   E +  V+ TN+   + + +    
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 144
Query: 141 LLKAS-----GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +LKA      G   IV ++S  G   +   + Y+ASK  +   TK L  E A   I VNA
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 196 VSPWAVNTQISP------PDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  V T ++        D+ ++  +E + ++ A+ P+ R  +P+E++ +VA+L  P A
Sbjct: 205 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 249 SYITGQVISIDGG 261
           + +T Q +++ GG
Sbjct: 265 AAVTAQALNVCGG 277

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 16/253 (6%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG T GIG  I   L + G  V  C R +  +   ++E    G +  G  CD+    
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           + E L+  V   + G +++LVNNA         E   E +  V+ TN+   + + +    
Sbjct: 85  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 140
Query: 141 LLKAS-----GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +LKA      G   IV ++S  G   +   + Y+ASK  +   TK L  E A   I VNA
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 200
Query: 196 VSPWAVNTQISP------PDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  V T ++        D+ ++  +E + ++ A+ P+ R  +P+E++ +VA+L  P A
Sbjct: 201 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 260
Query: 249 SYITGQVISIDGG 261
           + +T Q +++ GG
Sbjct: 261 AAVTAQALNVCGG 273

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 14/262 (5%)
Query: 7   PVFGDKKWS----LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-INERIQE 61
           P F D  +     L+G   L+TGG  GIG A+    A+ GA++     D+    NE  Q 
Sbjct: 32  PQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQY 91
Query: 62  WESKGFKVTGSVCDLSFGDQREKLI-ETVSSVFDGKLNILVNNAALVVMKRATEY-TLEE 119
            E +G K      DLS     + ++ ETV  +  G LNILVNN A    ++  EY T E+
Sbjct: 92  VEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL--GSLNILVNNVAQQYPQQGLEYITAEQ 149
Query: 120 YSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT 179
                  N+ S +H+ + A   LK  G+  I+  +S+        L  Y+A+KGAI   T
Sbjct: 150 LEKTFRINIFSYFHVTKAALSHLK-QGDV-IINTASIVAYEGNETLIDYSATKGAIVAFT 207
Query: 180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL 239
           ++L+       IRVN V+P  + T + P   ++  V ++    +  P+ R  +P E++P 
Sbjct: 208 RSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG---SNVPMQRPGQPYELAPA 264
Query: 240 VAFLCLPAASYITGQVISIDGG 261
             +L    +SY+TGQ+I ++GG
Sbjct: 265 YVYLASSDSSYVTGQMIHVNGG 286

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 16/253 (6%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG T GIG  I   L + G  V  C R +  +   ++E    G +  G  CD+    
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           + E L+  V   + G +++LVNNA         E   E +  V+ TN+   + + +    
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 144
Query: 141 LLKAS-----GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +LKA      G   IV ++S  G   +   + Y+ASK  +   TK L  E A   I VNA
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 196 VSPWAVNTQISP------PDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  V T ++        D+ ++  +E + ++ A+ P+ R  +P+E++ +VA+L  P A
Sbjct: 205 VCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 249 SYITGQVISIDGG 261
           + +T Q +++ GG
Sbjct: 265 AAVTAQALNVCGG 277

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 16/253 (6%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG T GIG  I   L + G  V  C R +  +   ++E    G +  G  CD+    
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           + E L+  V   + G +++LVNNA         E   E +  V+ TN+   + + +    
Sbjct: 89  EIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---Q 144
Query: 141 LLKAS-----GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +LKA      G   IV ++S  G   +   + Y+ASK  +   TK L  E A   I VNA
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 196 VSPWAVNTQISP------PDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  V T ++        D+ ++  +E + ++ A+ P+ R  +P+E++ +VA+L  P A
Sbjct: 205 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 249 SYITGQVISIDGG 261
           + +T Q +++ GG
Sbjct: 265 AAVTAQALNVCGG 277

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 127/250 (50%), Gaps = 14/250 (5%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L G  ALVTG +RGIG AI E LA  GA V      ++   + I ++     K  G   
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDYLGDNGK--GXAL 62
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALV---VMKRATEYTLEEYSSVMSTNVESS 131
           +++  +  E +++ ++  F G ++ILVNNA +    ++ R  E   EE+S +  TN+ S 
Sbjct: 63  NVTNPESIEAVLKAITDEFGG-VDILVNNAGITRDNLLXRXKE---EEWSDIXETNLTSI 118
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           + L +             I+ + SV G       + YAA+K  +   TK+ A E A+  +
Sbjct: 119 FRLSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGV 178
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
            VN V+P  + T  +   LND   ++    +A+ P  R  +P EI+  VAFL  P A+YI
Sbjct: 179 TVNTVAPGFIETDXTKA-LND---EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYI 234
Query: 252 TGQVISIDGG 261
           TG+ + ++GG
Sbjct: 235 TGETLHVNGG 244

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 5/250 (2%)
Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           +  SL+G  ALVTG +RGIG AI  EL R GA V       +   +  +  ++ G +  G
Sbjct: 21  QSMSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAG 80
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
            V D+S  +     +E +     G+  I+VNNA +           +E+  V++TN+ S 
Sbjct: 81  LVLDVSSDESVAATLEHIQQHL-GQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSL 139
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           Y L +     +  +    I+ + SV GA+     + YAA+K  +   T+ LA E  + +I
Sbjct: 140 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 199
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
            VNAV+P  ++T ++     +L   +   L+ + PL R  +  EI+ +V FL    A+Y+
Sbjct: 200 TVNAVAPGFIDTDMT----RELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYV 255
Query: 252 TGQVISIDGG 261
           TG  + ++GG
Sbjct: 256 TGATVPVNGG 265

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 126/260 (48%), Gaps = 20/260 (7%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           + L G  A+VTGG++GIG AI   L + GA+V     D       +   E+ GF V   V
Sbjct: 8   FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDV 67
Query: 74  CDLSFGDQ-REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
              +  D   +K I+ +     G  ++L  NA +  M+ A + T EE+      N    +
Sbjct: 68  TKRASVDAAMQKAIDAL-----GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVF 122
Query: 133 HLCQLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
              Q+A    L ++    IV  +S+A  +  P L+ Y+ASK A+   T+ LA E A  +I
Sbjct: 123 LANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNI 182
Query: 192 RVNAVSPWAVNTQISPPDL----------NDLLVQEYVKLIAKTPLARSAEPNEISPLVA 241
           RVN V P  V T +   ++           + +  EYV L   TPL R  EP +++ +V 
Sbjct: 183 RVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL---TPLGRIEEPEDVADVVV 239
Query: 242 FLCLPAASYITGQVISIDGG 261
           FL   AA ++TGQ I++ GG
Sbjct: 240 FLASDAARFMTGQGINVTGG 259

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 19/254 (7%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL    ALVTG +RGIG+ +   LA  GA+V      Q    +     + KGFK  G V 
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVL 61
Query: 75  DLSFGDQREKLIETVSSVF------DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
           ++S        IE++ + F      +  ++ILVNNA +         + +E+ SV++TN+
Sbjct: 62  NIS-------DIESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNL 114
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            S +   +             I+ + SV G+   P  + Y A+K  +   +K+LA E A+
Sbjct: 115 SSIFRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVAS 174
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA-KTPLARSAEPNEISPLVAFLCLPA 247
            +I VN V+P  + T     D  D L  E    IA K P  +  EP +I+  VAFL    
Sbjct: 175 RNITVNVVAPGFIAT-----DXTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEE 229
Query: 248 ASYITGQVISIDGG 261
           A YITGQ + ++GG
Sbjct: 230 AKYITGQTLHVNGG 243

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 14/262 (5%)
Query: 7   PVFGDKKWS----LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-INERIQE 61
           P F D  +     L+G   L+TGG  GIG A+    A+ GA++     D+    NE  Q 
Sbjct: 32  PQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQY 91
Query: 62  WESKGFKVTGSVCDLSFGDQREKLI-ETVSSVFDGKLNILVNNAALVVMKRATEY-TLEE 119
            E +G K      DLS     + ++ ETV  +  G LNILVNN A    ++  EY T E+
Sbjct: 92  VEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL--GSLNILVNNVAQQYPQQGLEYITAEQ 149
Query: 120 YSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT 179
                  N+ S +H+ + A   LK  G+  I+  +S+        L  Y+A+KGAI   T
Sbjct: 150 LEKTFRINIFSYFHVTKAALSHLK-QGDV-IINTASIVAYEGNETLIDYSATKGAIVAFT 207
Query: 180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL 239
           ++L+       IRVN V+P  + T + P   ++  V ++    +  P  R  +P E++P 
Sbjct: 208 RSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG---SNVPXQRPGQPYELAPA 264
Query: 240 VAFLCLPAASYITGQVISIDGG 261
             +L    +SY+TGQ I ++GG
Sbjct: 265 YVYLASSDSSYVTGQXIHVNGG 286

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 130/255 (50%), Gaps = 7/255 (2%)
Query: 8   VFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF 67
           +F      L G  A++TG   GIG  I    A  GASV     + +  N  + E +  G 
Sbjct: 1   MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG 60
Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
           +     CD++   +   L +   S   GK++ILVNNA      +  +  + ++      N
Sbjct: 61  QAFACRCDITSEQELSALADFAISKL-GKVDILVNNAG-GGGPKPFDMPMADFRRAYELN 118
Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           V S +HL QL  P ++ +G   I+ ++S+A       +++YA+SK A + L +N+A +  
Sbjct: 119 VFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG 178
Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQEY-VKLIAKTPLARSAEPNEISPLVAFLCLP 246
             +IRVN ++P A+ T      L  ++  E   K++  TP+ R  +P +I+    FLC P
Sbjct: 179 EKNIRVNGIAPGAILTDA----LKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSP 234
Query: 247 AASYITGQVISIDGG 261
           AAS+++GQ++++ GG
Sbjct: 235 AASWVSGQILTVSGG 249

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score =  103 bits (258), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 13/260 (5%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV--HTCGRDQNMINERIQEWESK-GFKVTGS 72
           L+G  A+VTG T GIG A+  ELA+ GA V  +  G+ +++  ER    ESK G K    
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERER-STLESKFGVKAYYL 60
Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             DLS        I   +    G L+ILVNNA +       E+ +++++++++ N+ + +
Sbjct: 61  NADLSDAQATRDFIAKAAEALGG-LDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVF 119
Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           H    A P+++  G   I+ ++S  G ++    SAY A+K  +  LTK  A E A   I 
Sbjct: 120 HGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGIT 179
Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIA--------KTPLARSAEPNEISPLVAFLC 244
            NA+ P  V T +    +  +  Q+ + + A        K P  +   P ++     FL 
Sbjct: 180 CNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLS 239
Query: 245 LPAASYITGQVISIDGGYTA 264
             AA  +TG  +S+DGG+TA
Sbjct: 240 SAAADQMTGTTLSLDGGWTA 259

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 127/246 (51%), Gaps = 11/246 (4%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG  RGIG  I + LA+  + V    R Q   +  + E +S G++ +G   D+S   
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVS--- 103
Query: 81  QREKLIETVSSVF--DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
           ++E++ E ++ +      ++ILVNNA +           +E+  V+ TN+ S +++ Q  
Sbjct: 104 KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPI 163
Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
              +  +    I+ +SS+ G       + Y++SK  +   TK+LA E A+ +I VNA++P
Sbjct: 164 SKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAP 223
Query: 199 WAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
             +++     D+ D + ++  K +I+  P  R   P E++ L  FL    + YI G+V  
Sbjct: 224 GFISS-----DMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFV 278
Query: 258 IDGGYT 263
           IDGG +
Sbjct: 279 IDGGLS 284

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 125/255 (49%), Gaps = 16/255 (6%)
Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           K +  G+ ALVTG  +GIG   V+ L   GA V    R  + +    +E           
Sbjct: 2   KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-----IEP 56
Query: 73  VC-DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           VC DL   D  EK +  +     G +++LVNNAALV+M+   E T E +    S N+ S 
Sbjct: 57  VCVDLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSV 111
Query: 132 YHLCQL-AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           + + Q+ A  ++      SIV +SS+   ++ P L  Y+++KGA+  LTK +A E     
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHK 171
Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           IRVN+V+P  V T +      D    E+  KL  + PL + AE  ++   + FL    ++
Sbjct: 172 IRVNSVNPTVVLTDMGKKVSAD---PEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA 228
Query: 250 YITGQVISIDGGYTA 264
             +G  I +D GY A
Sbjct: 229 STSGGGILVDAGYLA 243

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 23/264 (8%)
Query: 3   EAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW 62
           E A+P F  +       + LVTGG RGIG AI + LA  G  V    R            
Sbjct: 7   EGAKPPFVSR-------SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG--------- 50
Query: 63  ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS 122
             KG  + G  CD++  D  ++    V     G + +LV+NA L         T E++  
Sbjct: 51  APKG--LFGVECDVTDSDAVDRAFTAVEE-HQGPVEVLVSNAGLSADAFLMRMTEEKFEK 107
Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
           V++ N+  ++ + Q A   ++ +    ++F+ SV+G+  I   + YAASK  +  + +++
Sbjct: 108 VINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSI 167
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A E +  ++  N V+P  ++T ++   L++ + Q  ++ I   P  R   P E++ +V+F
Sbjct: 168 ARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFI---PAKRVGTPAEVAGVVSF 223
Query: 243 LCLPAASYITGQVISIDGGYTAGN 266
           L    ASYI+G VI +DGG   G+
Sbjct: 224 LASEDASYISGAVIPVDGGMGMGH 247

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 16/265 (6%)
Query: 9   FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGF 67
            G +  SL G  ALVTG  RGIG  +  EL R G  V            E +   +  G 
Sbjct: 20  LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS 79
Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
                  ++   +   ++ E    +F GKL+I+ +N+ +V      + T EE+  V + N
Sbjct: 80  DAACVKANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTIN 138
Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAG-AISIPRLSAYAASKGAINQLTKNLACEW 186
               + + + A+  L+  G   ++ M S+ G A ++P+ + Y+ SKGAI    + +A + 
Sbjct: 139 TRGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 196
Query: 187 ATDSIRVNAVSPWAVNTQI----------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEI 236
           A   I VN V+P  + T +          +  +L++  V EY   +  +PL R   P +I
Sbjct: 197 ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAA-VQWSPLRRVGLPIDI 255
Query: 237 SPLVAFLCLPAASYITGQVISIDGG 261
           + +V FL      ++TG+VI IDGG
Sbjct: 256 ARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 16/265 (6%)
Query: 9   FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGF 67
            G +  SL G  ALVTG  RGIG  +  EL R G  V            E +   +  G 
Sbjct: 20  LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS 79
Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
                  ++   +   ++ E    +F GKL+I+ +N+ +V      + T EE+  V + N
Sbjct: 80  DAACVKANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTIN 138
Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAG-AISIPRLSAYAASKGAINQLTKNLACEW 186
               + + + A+  L+  G   ++ M S+ G A ++P+ + Y+ SKGAI    + +A + 
Sbjct: 139 TRGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 196
Query: 187 ATDSIRVNAVSPWAVNTQI----------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEI 236
           A   I VN V+P  + T +          +  +L++  V EY   +  +PL R   P +I
Sbjct: 197 ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAA-VQWSPLRRVGLPIDI 255
Query: 237 SPLVAFLCLPAASYITGQVISIDGG 261
           + +V FL      ++TG+VI IDGG
Sbjct: 256 ARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 136/283 (48%), Gaps = 33/283 (11%)
Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNM---------INE 57
           G +   L+G  A +TG  RG G      LA+ GA   ++  C +  N+         + E
Sbjct: 38  GARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKE 97
Query: 58  RIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTL 117
            ++  E +G ++     D+      + +++   + F G ++ILV+N  +         T 
Sbjct: 98  TVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTD 156
Query: 118 EEYSSVMSTNVESSYHLCQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN 176
           +++S ++ TN+  ++H C+   P +++     S++F+SS  G    P  S YAASK  + 
Sbjct: 157 QQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216
Query: 177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSA----- 231
            L  +LA E    +IRVN+V+P AVNT+++   LN+ L++ ++  + + P    A     
Sbjct: 217 GLMLSLANEVGRHNIRVNSVNPGAVNTEMA---LNEKLLKMFLPHL-ENPTREDAAELFS 272
Query: 232 ----------EPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
                     EP ++S  VA+L    A YI G  I +DGG  A
Sbjct: 273 QLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVTGSV 73
           L+G  A+VTG T GIG  I   LA  GA +   G       E+++       G KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DLS G+    L++       G+++ILVNNA +       ++  E++ ++++ N+ + +H
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
               A P +K  G   I+ ++S  G ++    SAY A+K  +   TK  A E A   I  
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 194 NAVSP-WA----VNTQISPPDLNDLLVQEYVK---LIAKTPLARSAEPNEISPLVAFLCL 245
           NA+ P W     V  QIS     + + QE      L  K P  +   P ++     FL  
Sbjct: 181 NAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240
Query: 246 PAASYITGQVISIDGGYTA 264
            AA+ ITG  +S+DGG+TA
Sbjct: 241 DAAAQITGTTVSVDGGWTA 259

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVTGSV 73
           L+G  A+VTG T GIG  I   LA  GA +   G       E+++       G KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DLS G+    L++       G+++ILVNNA +       ++  E++ ++++ N+ + +H
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
               A P +K  G   I+ ++S  G ++    SAY A+K  +   TK  A E A   I  
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 194 NAVSP-WA----VNTQISPPDLNDLLVQEYVK---LIAKTPLARSAEPNEISPLVAFLCL 245
           NA+ P W     V  QIS     + + QE      L  K P  +   P ++     FL  
Sbjct: 181 NAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240
Query: 246 PAASYITGQVISIDGGYTA 264
            AA+ ITG  +S+DGG+TA
Sbjct: 241 DAAAQITGTTVSVDGGWTA 259

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVTGSV 73
           L+G  A+VTG T GIG  I   LA  GA +   G       E+++       G KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DLS G+    L++       G+++ILVNNA +       ++  E++ ++++ N+ + +H
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
               A P +K  G   I+ ++S  G ++    SAY A+K  +   TK  A E A   I  
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 194 NAVSP-WA----VNTQISPPDLNDLLVQEYVK---LIAKTPLARSAEPNEISPLVAFLCL 245
           NA+ P W     V  QIS     + + QE      L  K P  +   P ++     FL  
Sbjct: 181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240
Query: 246 PAASYITGQVISIDGGYTA 264
            AA+ ITG  +S+DGG+TA
Sbjct: 241 DAAAQITGTTVSVDGGWTA 259

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 16/255 (6%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF---KVTGSVCDLS 77
           A++TG + GIG A     AR GA V   GR    + E  Q+  + G     V   V D++
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYH 133
               +++++ T    F GKL+ILVNNA   +     K  T  ++E Y + ++ N+ S   
Sbjct: 69  TDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIA 127
Query: 134 LCQLAHPLLKASGNASIVFMSSVA-GAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           L + A P L +S    IV +SS+A G  + P    Y+ +K AI+Q T+N A +     IR
Sbjct: 128 LTKKAVPHL-SSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIR 186
Query: 193 VNAVSPWAVNTQIS-----PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC-LP 246
           VN++SP  V T        P + +         +    P     +P +I+ ++AFL    
Sbjct: 187 VNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRK 246
Query: 247 AASYITGQVISIDGG 261
            +SYI G  + +DGG
Sbjct: 247 TSSYIIGHQLVVDGG 261

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 125/256 (48%), Gaps = 18/256 (7%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV-----HTCGRDQNMINERIQEWESKGFKV 69
           SL G TA VTGG+RGIG AI + LA  GA+V     +   R Q +++E     E  G + 
Sbjct: 28  SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSE----IEQAGGRA 83
Query: 70  TGSVCDLSFGDQREKLI-ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
                D    +  E+ I ETV ++  G L+ILVN+A +       E T+ ++  V + N 
Sbjct: 84  VAIRADNRDAEAIEQAIRETVEAL--GGLDILVNSAGIWHSAPLEETTVADFDEVXAVNF 141
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            + +   + A   L   G   I   S++A  +  P +S Y+ASK A+  LTK LA +   
Sbjct: 142 RAPFVAIRSASRHL-GDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGP 200
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
             I VN V P + +T  +P D +    Q       +       EP +I+ LVA+L  P  
Sbjct: 201 RGITVNIVHPGSTDTDXNPADGDHAEAQRE-----RIATGSYGEPQDIAGLVAWLAGPQG 255
Query: 249 SYITGQVISIDGGYTA 264
            ++TG  ++IDGG  A
Sbjct: 256 KFVTGASLTIDGGANA 271

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 125/248 (50%), Gaps = 8/248 (3%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
            +  G  ALVTG +RGIG AI E LA  GA V      +N   + I ++     K  G +
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYLGANGK--GLM 57
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            +++     E ++E + + F G+++ILVNNA +           EE++ ++ TN+ S + 
Sbjct: 58  LNVTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFR 116
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +     +    +  I+ + SV G +     + YAA+K  +   +K+LA E A+  I V
Sbjct: 117 LSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITV 176
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N V+P  + T ++    +D    +   ++A+ P  R     EI+  VAFL    A+YITG
Sbjct: 177 NVVAPGFIETDMTRALSDD----QRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITG 232
Query: 254 QVISIDGG 261
           + + ++GG
Sbjct: 233 ETLHVNGG 240

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 5/250 (2%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVC 74
           L G   ++TG + G+G ++    A   A V    R  ++  N  ++E +  G +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++       L+++    F GKL++++NNA L     + E +L +++ V+ TN+  ++  
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 135 CQLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A    ++     +++ MSSV   I  P    YAASKG +  +TK LA E+A   IRV
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIRV 183
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N + P A+NT I+     D   ++   + +  P+    EP EI+ + A+L    ASY+TG
Sbjct: 184 NNIGPGAINTPINAEKFAD--PEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG 241
Query: 254 QVISIDGGYT 263
             +  DGG T
Sbjct: 242 ITLFADGGMT 251

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 128/249 (51%), Gaps = 22/249 (8%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           ALVTG +RGIG AI  ELA  GA V           +E +    + G +      D+S  
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQE 90
Query: 80  DQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNVESSYH 133
            + E L   V   + G+L++LVNNA       L+ MKR      +++ SV+  N+   + 
Sbjct: 91  SEVEALFAAVIERW-GRLDVLVNNAGITRDTLLLRMKR------DDWQSVLDLNLGGVFL 143
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
             + A  ++    +  I+ ++SV G +  P  + Y+A+K  +  LTK +A E A+  I V
Sbjct: 144 CSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITV 203
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL-PAASYIT 252
           NAV+P  + T     D+   L  E  KL+   PL R  E  E++ +V FL   PAA+YIT
Sbjct: 204 NAVAPGFIAT-----DMTSELAAE--KLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYIT 256
Query: 253 GQVISIDGG 261
           GQVI+IDGG
Sbjct: 257 GQVINIDGG 265

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 5/250 (2%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVC 74
           L G   ++TG + G+G ++    A   A V    R  ++  N  ++E +  G +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++       L+++    F GKL++++NNA L     + E +L +++ V+ TN+  ++  
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 135 CQLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A    ++     +++ MSSV   I  P    YAASKG +  +T+ LA E+A   IRV
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N + P A+NT I+     D   ++   + +  P+    EP EI+ + A+L    ASY+TG
Sbjct: 184 NNIGPGAINTPINAEKFAD--PEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG 241
Query: 254 QVISIDGGYT 263
             +  DGG T
Sbjct: 242 ITLFADGGMT 251

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 123/262 (46%), Gaps = 19/262 (7%)
Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV 69
           G     L    A++TG   GIG      LAR GA V      +    +      S G   
Sbjct: 3   GSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPET---DLAGAAASVGRGA 59
Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSV 123
              V DL+       LI+     F G+L+I+ NNAA      ++V    T+ T++ +   
Sbjct: 60  VHHVVDLTNEVSVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLV----TQMTVDVWDDT 114
Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
            + N   +  +C+ A P L ++G  +IV +SS     +    +AYA +K AI  LT+ +A
Sbjct: 115 FTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVA 174
Query: 184 CEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA-RSAEPNEISPLVAF 242
            ++    +R NA++P  V T    P L   L Q  V + A   LA R  EP+EI+ LV F
Sbjct: 175 TQYGRHGVRCNAIAPGLVRT----PRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCF 230
Query: 243 LCLPAASYITGQVISIDGGYTA 264
           L    A++ITGQVI+ D G  A
Sbjct: 231 LASDRAAFITGQVIAADSGLLA 252

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 8/248 (3%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
            +  G  ALVTG +RGIG AI E LA  GA V      +N   + I ++     K  G +
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYLGANGK--GLM 57
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            +++     E ++E + + F G+++ILVNNA +           EE++ ++ TN+ S + 
Sbjct: 58  LNVTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFR 116
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +     +    +  I+ + SV G +     + +AA+K  +   +K+LA E A+  I V
Sbjct: 117 LSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITV 176
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N V+P  + T ++    +D    +   ++A+ P  R     EI+  VAFL    A+YITG
Sbjct: 177 NVVAPGFIETDMTRALSDD----QRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITG 232
Query: 254 QVISIDGG 261
           + + ++GG
Sbjct: 233 ETLHVNGG 240

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 5/250 (2%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVC 74
           L G   ++TG + G+G ++    A   A V    R  ++  N  ++E +  G +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++       L+++    F GKL++++NNA L     + E +L +++ V+ TN+  ++  
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 135 CQLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A    ++     +++ MSSV   I  P    YAASKG +  +T+ LA E+A   IRV
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N + P A+NT I+     D   ++   + +  P+    EP EI+ + A+L    ASY+TG
Sbjct: 184 NNIGPGAINTPINAEKFAD--PEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG 241
Query: 254 QVISIDGGYT 263
             +  DGG T
Sbjct: 242 ITLFADGGMT 251

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 5/250 (2%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVC 74
           L G   ++TG + G+G ++    A   A V    R  ++  N  ++E +  G +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++       L+++    F GKL++++NNA L     + E +L +++ V+ TN+  ++  
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 135 CQLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A    ++     +++ MSSV   I  P    YAASKG +  +T+ LA E+A   IRV
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N + P A+NT I+     D   ++   + +  P+    EP EI+ + A+L    ASY+TG
Sbjct: 184 NNIGPGAINTPINAEKFAD--PEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG 241
Query: 254 QVISIDGGYT 263
             +  DGG T
Sbjct: 242 ITLFADGGMT 251

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 17  RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           R  TA VTG + GIG A+   LA  G +V+ C RD   ++  +    + G  V GS CD+
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV 82
Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           +  D+    +      F G + ILVN+A         +     ++ V+ TN+   + + +
Sbjct: 83  TSTDEVHAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTR 141
Query: 137 --LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
             L    ++ +G   IV ++S  G   +   + Y ASK  +   TK++  E A   I VN
Sbjct: 142 EVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVN 201
Query: 195 AVSPWAVNTQISPP---------DLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
           AV P  V T ++            + +  V E  +  AK PL R + P E++ LV +L  
Sbjct: 202 AVCPGYVETPMAERVREGYARHWGVTEQEVHE--RFNAKIPLGRYSTPEEVAGLVGYLVT 259
Query: 246 PAASYITGQVISIDGG 261
            AA+ IT Q +++ GG
Sbjct: 260 DAAASITAQALNVCGG 275

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 119/254 (46%), Gaps = 19/254 (7%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ-EWESKGFKVTGSVCDLSF- 78
           A+VTG + G G AI       G  V         + E  +  W +   KV     D++  
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE 64
Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRA---TEYTLEEYSSVMSTNVESSYHLC 135
           GD    +  T+     G +++LVNNA +     A       +E++  VM+ NV   +  C
Sbjct: 65  GDVNAAIAATMEQF--GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P +   G   IV ++SVA  ++ P  SAY  SKGA+ QLTK++A ++A   IR NA
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 196 VSPWAVNT-----QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           V P  + T     ++  P+L D       +++A+ P        +++  V FL    A+Y
Sbjct: 183 VCPGMIETPMTQWRLDQPELRD-------QVLARIPQKEIGTAAQVADAVMFLAGEDATY 235
Query: 251 ITGQVISIDGGYTA 264
           + G  + +DG YTA
Sbjct: 236 VNGAALVMDGAYTA 249

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 21/254 (8%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV-C 74
           L G  ALV+GG RG+G + V  +   GA V       ++++E  +   ++       V  
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFG----DILDEEGKAMAAELADAARYVHL 60
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++   Q +  ++T  + F G L++LVNNA ++ +    +Y L E+  ++  N+   +  
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGG-LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +     +K +G  SI+ +SS+ G         Y A+K A+  LTK+ A E     IRVN
Sbjct: 120 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 195 AVSPWAVNTQIS---PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           ++ P  V T ++   P D            I +T L R+AEP E+S LV +L    +SY 
Sbjct: 180 SIHPGLVKTPMTDWVPED------------IFQTALGRAAEPVEVSNLVVYLASDESSYS 227
Query: 252 TGQVISIDGGYTAG 265
           TG    +DGG  AG
Sbjct: 228 TGAEFVVDGGTVAG 241

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 128/264 (48%), Gaps = 23/264 (8%)
Query: 3   EAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW 62
           E A+P F  +       + LVTGG RGIG AI + LA  G  V    R            
Sbjct: 27  EGAKPPFVSR-------SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG--------- 70
Query: 63  ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS 122
             KG    G   D++  D  ++    V     G + +LV+NA L         T E++  
Sbjct: 71  APKGL--FGVEVDVTDSDAVDRAFTAVEE-HQGPVEVLVSNAGLSADAFLMRMTEEKFEK 127
Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
           V++ N+  ++ + Q A   ++ +    ++F++SV+G   I   + YAASK  +  + +++
Sbjct: 128 VINANLTGAFRVAQRASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSI 187
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A E +  ++  N V+P  ++T ++   L++ + Q  ++ I   P  R   P E++ +V+F
Sbjct: 188 ARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFI---PAKRVGTPAEVAGVVSF 243
Query: 243 LCLPAASYITGQVISIDGGYTAGN 266
           L    ASYI+G VI +DGG   G+
Sbjct: 244 LASEDASYISGAVIPVDGGMGMGH 267

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 126/247 (51%), Gaps = 15/247 (6%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQN------MINERIQEWESKGFKVTGSVC 74
           A VTGG  G+G AI   L   G +V     ++N      +++ER    + K + V     
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV----- 82
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  +  E+  E V + F GK+++L+NNA +       + T  ++ +VM T++++ +++
Sbjct: 83  DVADFESCERCAEKVLADF-GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNV 141
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +     +       IV + SV G+      + YA++K  I+  TK LA E A   I VN
Sbjct: 142 TKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVN 201
Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
            VSP  + T +      D+L     K++ + P+ R   P+E++ L+AFLC   A ++TG 
Sbjct: 202 TVSPGYLATAMVEAVPQDVL---EAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGA 258
Query: 255 VISIDGG 261
            ++I+GG
Sbjct: 259 DLAINGG 265

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 127/264 (48%), Gaps = 23/264 (8%)
Query: 3   EAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW 62
           E A+P F  +       + LVTGG RGIG AI + LA  G  V    R            
Sbjct: 7   EGAKPPFVSR-------SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG--------- 50
Query: 63  ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS 122
             KG    G   D++  D  ++    V     G + +LV+NA L         T E++  
Sbjct: 51  APKGL--FGVEVDVTDSDAVDRAFTAVEE-HQGPVEVLVSNAGLSADAFLMRMTEEKFEK 107
Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
           V++ N+  ++ + Q A   ++ +    ++F+ SV+G   I   + YAASK  +  + +++
Sbjct: 108 VINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A E +  ++  N V+P  ++T ++   L++ + Q  ++ I   P  R   P E++ +V+F
Sbjct: 168 ARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFI---PAKRVGTPAEVAGVVSF 223
Query: 243 LCLPAASYITGQVISIDGGYTAGN 266
           L    ASYI+G VI +DGG   G+
Sbjct: 224 LASEDASYISGAVIPVDGGMGMGH 247

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 126/255 (49%), Gaps = 14/255 (5%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE-SKGFKVTGSV 73
           SL+G  A VTG + GIG+A+ E  A+ GA V     + +  +E+ +  + + G       
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADV-AIWYNSHPADEKAEHLQKTYGVHSKAYK 89
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS---VMSTNVES 130
           C++S     E+ I      F G +++ V NA  V   +  E  ++ Y S   ++S ++  
Sbjct: 90  CNISDPKSVEETISQQEKDF-GTIDVFVANAG-VTWTQGPEIDVDNYDSWNKIISVDLNG 147
Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAI-SIPRLSA-YAASKGAINQLTKNLACEWAT 188
            Y+       + K +G  S++  SS++G I +IP+L A Y  +K A   L K+LA EWA 
Sbjct: 148 VYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAP 207
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
            + RVN +SP  ++T I+     D+      K    TPL R     E+     +L   A+
Sbjct: 208 FA-RVNTISPGYIDTDITDFASKDMK----AKWWQLTPLGREGLTQELVGGYLYLASNAS 262
Query: 249 SYITGQVISIDGGYT 263
           ++ TG  + IDGGYT
Sbjct: 263 TFTTGSDVVIDGGYT 277

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 130/259 (50%), Gaps = 20/259 (7%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGAS---VHTCGRDQNMINERIQEWESKGFKVTG 71
           S    T +VTGG RGIG A    +A  GA+   ++    D   + E++ +    G K   
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGK--EFGVKTKA 68
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
             CD+S  D   K I+ + +   G ++ L+ NA + V+K ATE T E+++ V   NV   
Sbjct: 69  YQCDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGV 127
Query: 132 YHLCQLAHPL-LKASGNASIVFMSSVAGAI--------SIPRLSAYAASKGAINQLTKNL 182
           ++ C+    L L+     SIV  SS++  I        S+ ++  Y +SK A + L K L
Sbjct: 128 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV-FYNSSKAACSNLVKGL 186
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A EWA+  IRVNA+SP  VNT  +     D  ++++    +  PL R A+P E++     
Sbjct: 187 AAEWASAGIRVNALSPGYVNTDQTAH--MDKKIRDHQA--SNIPLNRFAQPEEMTGQAIL 242
Query: 243 LCLPAASYITGQVISIDGG 261
           L    A+Y+TG    IDGG
Sbjct: 243 LLSDHATYMTGGEYFIDGG 261

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 128/250 (51%), Gaps = 20/250 (8%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV----TG 71
           L G T+L+TG + GIG AI   L + G+ V   G ++       ++ +S G  +    T 
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE-------EKLKSLGNALKDNYTI 64
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
            VC+L+  ++   LI   S+     L+ILV NA +     A     +++  V+  N++++
Sbjct: 65  EVCNLANKEECSNLISKTSN-----LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKAN 119
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           + L + A   +       I+ +SS+ G    P  + Y ASK  +  +TK+L+ E AT  I
Sbjct: 120 FILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGI 179
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
            VNAV+P  + + ++   LN+   ++   ++ K PL     P +++  VAFL    ASYI
Sbjct: 180 TVNAVAPGFIKSDMTDK-LNE---KQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYI 235
Query: 252 TGQVISIDGG 261
           TGQ + ++GG
Sbjct: 236 TGQTLHVNGG 245

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 14/251 (5%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
           +VTGG  GIG A  E  A+ GA V     +++       E  SK F V     D+S    
Sbjct: 31  IVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVR---VDVSSAKD 87
Query: 82  REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPL 141
            E  +E  ++ + G++++LVNNA             E +  + S NV+  +   +   P+
Sbjct: 88  AESXVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYVIPV 146
Query: 142 LKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAV 201
            + +G  SI+  +S     +I   +AY ASKGAI+ LT+  A + A + IRVNAV+P  +
Sbjct: 147 XRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTI 206
Query: 202 NTQISPPDLNDLLVQ--EYVKLI----AKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           ++    P    +  +  +  KL     A+    R     EI+    FL    + + TG +
Sbjct: 207 DS----PYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEIAEAXLFLASDRSRFATGSI 262
Query: 256 ISIDGGYTAGN 266
           +++DGG + GN
Sbjct: 263 LTVDGGSSIGN 273

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 13/255 (5%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGAS-----VHTCGRDQNMINERIQEWESKGFKV 69
            L+    ++TGG+ G+G A+     RFG       ++    ++  ++ + +E E  G + 
Sbjct: 12  DLKDKVVVITGGSTGLGRAMA---VRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQA 67
Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
                D++  +    L++T    F G L++++NNA +     + E +L+ ++ V+ TN+ 
Sbjct: 68  IIVQGDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLT 126
Query: 130 SSYHLCQLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            ++   + A    ++     +++ MSSV   I  P    YAASKG +  +T+ LA E+A 
Sbjct: 127 GAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAP 186
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
             IRVN + P A+NT I+     D + +  V+  +  P+    +P E++ + AFL    A
Sbjct: 187 KGIRVNNIGPGAMNTPINAEKFADPVQRADVE--SMIPMGYIGKPEEVAAVAAFLASSQA 244
Query: 249 SYITGQVISIDGGYT 263
           SY+TG  +  DGG T
Sbjct: 245 SYVTGITLFADGGMT 259

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 13/255 (5%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGAS-----VHTCGRDQNMINERIQEWESKGFKV 69
            L+    ++TGG+ G+G A+     RFG       ++    ++  ++ + +E E  G + 
Sbjct: 12  DLKDKVVVITGGSTGLGRAMA---VRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQA 67
Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
                D++  +    L++T    F G L++++NNA +     + E +L+ ++ V+ TN+ 
Sbjct: 68  IIVQGDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLT 126
Query: 130 SSYHLCQLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            ++   + A    ++     +++ MSSV   I  P    YAASKG +  +T+ LA E+A 
Sbjct: 127 GAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAP 186
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
             IRVN + P A+NT I+     D + +  V+  +  P+    +P E++ + AFL    A
Sbjct: 187 KGIRVNNIGPGAMNTPINAEKFADPVQRADVE--SMIPMGYIGKPEEVAAVAAFLASSQA 244
Query: 249 SYITGQVISIDGGYT 263
           SY+TG  +  DGG T
Sbjct: 245 SYVTGITLFADGGMT 259

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 13/255 (5%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGAS-----VHTCGRDQNMINERIQEWESKGFKV 69
            L+    ++TGG+ G+G A+     RFG       ++    ++  ++ + +E E  G + 
Sbjct: 12  DLKDKVVVITGGSTGLGRAMA---VRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQA 67
Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
                D++  +    L++T    F G L++++NNA +     + E +L+ ++ V+ TN+ 
Sbjct: 68  IIVQGDVTKEEDVVNLVQTAIKEF-GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLT 126
Query: 130 SSYHLCQLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            ++   + A    ++     +++ MSSV   I  P    YAASKG +  +T+ LA E+A 
Sbjct: 127 GAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAP 186
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
             IRVN + P A+NT I+     D + +  V+  +  P+    +P E++ + AFL    A
Sbjct: 187 KGIRVNNIGPGAMNTPINAEKFADPVQRADVE--SMIPMGYIGKPEEVAAVAAFLASSQA 244
Query: 249 SYITGQVISIDGGYT 263
           SY+TG  +  DGG T
Sbjct: 245 SYVTGITLFADGGMT 259

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 28/257 (10%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-WESKGFKVTGSVC 74
           LR    +VTG + GIG AI E     G+ V         I+  I +  E+K   +    C
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGSKV---------IDLSIHDPGEAKYDHIE---C 60
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  DQ +  I+ +   + G +++LVNNA +    +    ++ E+  ++  N+   Y+ 
Sbjct: 61  DVTNPDQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYA 119
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            + A P +  S + SIV +SSV  +I     SAY  SK A+  LTK++A ++A   +R N
Sbjct: 120 SKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCN 178
Query: 195 AVSPWAVNTQI----------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
           AV P  ++T +          S P   +  + E+     + P+ R  +P E++  VAFL 
Sbjct: 179 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGH---EHPMQRIGKPQEVASAVAFLA 235
Query: 245 LPAASYITGQVISIDGG 261
              AS+ITG  + +DGG
Sbjct: 236 SREASFITGTCLYVDGG 252

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 115/246 (46%), Gaps = 5/246 (2%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+   A++TGG  GIG AI E  A  GA +     D     E      + G +V    CD
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAIRNLGRRVLTVKCD 62
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S     E   + V S F G+ +ILVNNA +  +    E T E++      NV+S + + 
Sbjct: 63  VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 121
Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P +K +G   I+ ++S    + I   + Y ++K A    T+ LA +   D I VNA
Sbjct: 122 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 181
Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           ++P  V T  +       +      ++   P  R   P +++   AFL    AS+ITGQ 
Sbjct: 182 IAPSLVRTATTEASALSAMFDVLPNMLQAIP--RLQVPLDLTGAAAFLASDDASFITGQT 239
Query: 256 ISIDGG 261
           +++DGG
Sbjct: 240 LAVDGG 245

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 28/257 (10%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-WESKGFKVTGSVC 74
           LR    +VTG + GIG AI E     G+ V         I+  I +  E+K   +    C
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKV---------IDLSIHDPGEAKYDHIE---C 53
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  DQ +  I+ +   + G +++LVNNA +    +    ++ E+  ++  N+   Y+ 
Sbjct: 54  DVTNPDQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYA 112
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            + A P +  S + SIV +SSV  +I     SAY  SK A+  LTK++A ++A   +R N
Sbjct: 113 SKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCN 171
Query: 195 AVSPWAVNTQI----------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
           AV P  ++T +          S P   +  + E+     + P+ R  +P E++  VAFL 
Sbjct: 172 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGH---EHPMQRIGKPQEVASAVAFLA 228
Query: 245 LPAASYITGQVISIDGG 261
              AS+ITG  + +DGG
Sbjct: 229 SREASFITGTCLYVDGG 245

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           KK++  G   LVTG    IG A    LA  G ++     ++  + +       KG +   
Sbjct: 3   KKFN--GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 60
Query: 72  SVCDLSFGDQREKLIETVSSVFD--GKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNV 128
            VCD++     E +I TV SV    GK++ L NNA          +Y  ++++ V++ NV
Sbjct: 61  YVCDVT---SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINV 117
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
             ++H+ +     +       IV  +S+AG    P ++AY  SKGAI  LT+  A + A 
Sbjct: 118 TGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAP 177
Query: 189 DSIRVNAVSP--------W--------AVNTQISPPDLNDLLVQEYVKLIAKTPLARSAE 232
            +IRVNA+SP        W         V +Q    D   +  Q    +I   P+ R  +
Sbjct: 178 YNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQ----MIGSVPMRRYGD 233
Query: 233 PNEISPLVAFLCLPAASYITGQVISIDGG 261
            NEI  +VAFL    +S++TG  + I GG
Sbjct: 234 INEIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 118/262 (45%), Gaps = 9/262 (3%)
Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV 69
           G    SL G  AL+TG   G G  + +  A+ GA V    RD+        E       V
Sbjct: 1   GPGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV 60
Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYT-LEEYSSVMSTNV 128
                D+S     +  +E   S F GK++ILVNNA +    +  E    EE+  ++  NV
Sbjct: 61  A---ADISKEADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNV 116
Query: 129 ESSYHLCQLAHPLLKASGNAS----IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLAC 184
              Y +     P  K +G       I+ ++S       P L+ Y A+KG +  +TK LA 
Sbjct: 117 RGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAI 176
Query: 185 EWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
           E A   IRV A++P A  T +    + +   +   K     P+ R  +P++++   AFLC
Sbjct: 177 ELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLC 236
Query: 245 LPAASYITGQVISIDGGYTAGN 266
            P AS ITG  + +DGG + G 
Sbjct: 237 SPQASMITGVALDVDGGRSIGG 258

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 123/246 (50%), Gaps = 9/246 (3%)
Query: 21  ALVTGGTRGIGYAIVEELAR--FGASVHTCGRDQNMINERIQEWESKGFKVTGSV-CDLS 77
           AL+TG +RGIG AI   LA   F  ++H  G+++    E  +E   +G  +   +  +L 
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIH-YGQNREKAEEVAEEARRRGSPLVAVLGANLL 62
Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
             +    L+   + V  G L+ LVNNA +           E++ +V+  N+ + +   + 
Sbjct: 63  EAEAATALVHQAAEVLGG-LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTRE 121
Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
           A  L+  +    IV ++SV G +  P  + Y ASK  +   T+ +A E+A   I VNAV+
Sbjct: 122 AVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVA 181
Query: 198 PWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
           P  + T+++   L   + + Y+K I   P  R   P E++  VAFL    A YITGQ + 
Sbjct: 182 PGFIETEMT-ERLPQEVKEAYLKQI---PAGRFGRPEEVAEAVAFLVSEKAGYITGQTLC 237
Query: 258 IDGGYT 263
           +DGG T
Sbjct: 238 VDGGLT 243

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 17/255 (6%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           +SL G  ALVTG   G+G AI   LA  GA V    R     +E +      G   +  +
Sbjct: 5   FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAAR--RAPDETLDIIAKDGGNASALL 62
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D  F D     +    S  D   +ILVNNA ++    + E++  ++  VM  N+++ + 
Sbjct: 63  ID--FADP----LAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFF 116
Query: 134 LCQ-LAHPLLKASGNASIVFMSSV---AGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
             Q  A  LL    +  +V ++S+    G I +P   +Y A+K  +  LTK LA EWA  
Sbjct: 117 TTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVP---SYTAAKHGVAGLTKLLANEWAAK 173
Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            I VNA++P  + T  +     D    + +  + + P  R     +I+    FL   AA 
Sbjct: 174 GINVNAIAPGYIETNNTEALRADAARNKAI--LERIPAGRWGHSEDIAGAAVFLSSAAAD 231
Query: 250 YITGQVISIDGGYTA 264
           Y+ G ++++DGG+ A
Sbjct: 232 YVHGAILNVDGGWLA 246

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 18/253 (7%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           + L G  ALVTG T G+G AI   L   GA V   G  +  + E   E   + F    ++
Sbjct: 6   FDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANL 65
Query: 74  CDL----SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
            D     + G + E+ +        G ++ILVNNA +         + E++ +V++ N+ 
Sbjct: 66  SDREAVKALGQKAEEEM--------GGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLT 117
Query: 130 SSYHLC-QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           S ++L  +L HP+++   N  I+ ++S+ G    P  + Y ASK  +   +K+LA E A+
Sbjct: 118 SVFNLTRELTHPMMRRR-NGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIAS 176
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
            ++ VN ++P  + + ++   LN+   ++   ++   P+ R     +I+  V +L    A
Sbjct: 177 RNVTVNCIAPGFIESAMTGK-LNE---KQKDAIMGNIPMKRMGVGADIAAAVVYLASDEA 232
Query: 249 SYITGQVISIDGG 261
           +Y+TGQ + ++GG
Sbjct: 233 AYVTGQTLHVNGG 245

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 131/251 (52%), Gaps = 25/251 (9%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           A+VTGG+ GIG A+V+ L R+GA V +   D     E+     S  FK+     D++  +
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLD-----EKSDVNVSDHFKI-----DVTNEE 66
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           + ++ +E  +  + G+++ILVNNA +           E +  ++  NV  SY + +   P
Sbjct: 67  EVKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIP 125
Query: 141 LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA 200
           ++ A G+ SI+ ++SV    +    +AY  SK A+  LT+++A ++A   IR NAV P  
Sbjct: 126 VMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGT 184
Query: 201 VNTQI----------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           + T +             +  +  ++E+ +   + P+ R   P E++ +VAFL    +S+
Sbjct: 185 IMTPMVIKAAKMEVGEDENAVERKIEEWGR---QHPMGRIGRPEEVAEVVAFLASDRSSF 241
Query: 251 ITGQVISIDGG 261
           ITG  +++DGG
Sbjct: 242 ITGACLTVDGG 252

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 18/253 (7%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           + L G  ALVTG T G+G AI   L   GA V   G  +  + E   E   + F    ++
Sbjct: 3   FDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANL 62
Query: 74  CDL----SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
            D     + G + E+ +        G ++ILVNNA +         + E++ +V++ N+ 
Sbjct: 63  SDREAVKALGQKAEEEM--------GGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLT 114
Query: 130 SSYHLC-QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           S ++L  +L HP+++   N  I+ ++S+ G    P  + Y ASK  +   +K+LA E A+
Sbjct: 115 SVFNLTRELTHPMMRRR-NGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIAS 173
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
            ++ VN ++P  + + ++   LN+   ++   ++   P+ R     +I+  V +L    A
Sbjct: 174 RNVTVNCIAPGFIESAMTGK-LNE---KQKDAIMGNIPMKRMGVGADIAAAVVYLASDEA 229
Query: 249 SYITGQVISIDGG 261
           +Y+TGQ + ++GG
Sbjct: 230 AYVTGQTLHVNGG 242

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           +VTG +RGIG AI   L + G  V     R      E  ++ E+ G +      D+S   
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEA 64
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
             E +++T    + G ++++VNNA +            ++  V+  N+   +   Q A  
Sbjct: 65  DVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK 123
Query: 141 LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA 200
           ++       I+ ++SV G I     + YAA+K  +   +K  A E A+ +I VN V P  
Sbjct: 124 IMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGF 183
Query: 201 VNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL-PAASYITGQVISID 259
           + + ++     D+      K++   PL R+ +P  ++ LV FL L PAASYITGQ  +ID
Sbjct: 184 IASDMTAKLGEDM----EKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTID 239
Query: 260 GG 261
           GG
Sbjct: 240 GG 241

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 21/254 (8%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV-C 74
           L G  ALV+GG RG G + V      GA V       ++++E  +   ++       V  
Sbjct: 5   LTGKVALVSGGARGXGASHVRAXVAEGAKVVFG----DILDEEGKAXAAELADAARYVHL 60
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++   Q +  ++T  + F G L++LVNNA ++ +    +Y L E+  ++  N+   +  
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGG-LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +      K +G  SI+ +SS+ G         Y A+K A+  LTK+ A E     IRVN
Sbjct: 120 IRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 195 AVSPWAVNTQIS---PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           ++ P  V T  +   P D            I +T L R+AEP E+S LV +L    +SY 
Sbjct: 180 SIHPGLVKTPXTDWVPED------------IFQTALGRAAEPVEVSNLVVYLASDESSYS 227
Query: 252 TGQVISIDGGYTAG 265
           TG    +DGG  AG
Sbjct: 228 TGAEFVVDGGTVAG 241

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 124/271 (45%), Gaps = 30/271 (11%)
Query: 7   PVFGDKKW----SLRGMTALVTGGTRGIGYAIVEELARFGASV-----HTCGRDQNMINE 57
           P  G+K +     L+   ALVTGG  GIG A     AR GA V          D   +  
Sbjct: 34  PDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKA 93
Query: 58  RIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT---- 113
            I+E   K   + G + D SF      L+        G L+IL    ALV  K+      
Sbjct: 94  LIEECGRKAVLLPGDLSDESFA---RSLVHKAREALGG-LDIL----ALVAGKQTAIPEI 145
Query: 114 -EYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK 172
            + T E++    + NV + + + Q A PLL     ASI+  SS+      P L  YAA+K
Sbjct: 146 KDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATK 203
Query: 173 GAINQLTKNLACEWATDSIRVNAVSPWAVNT--QISPPDLNDLLVQEYVKLIAKTPLARS 230
            AI   ++ LA + A   IRVN V+P  + T  QIS     D + Q       +TP+ R+
Sbjct: 204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ----FGQQTPMKRA 259
Query: 231 AEPNEISPLVAFLCLPAASYITGQVISIDGG 261
            +P E++P+  +L    +SY+T +V  + GG
Sbjct: 260 GQPAELAPVYVYLASQESSYVTAEVHGVCGG 290

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 94.0 bits (232), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 13/256 (5%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERI-QEWESKGFKVTGSVC 74
           L G  ALVTG  RGIG A+   L R GA V     +     E++  E ++ G        
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+    +  KL +   + F G L+I V+N+ +V      + T EE+  V S N    + +
Sbjct: 76  DIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFV 134
Query: 135 CQLAHPLLKASGNASIVFMSS-VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A+  L   G   IV  SS  +   S+P+ S Y+ SKGA++   +  + +     I V
Sbjct: 135 AREAYRHLTEGGR--IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITV 192
Query: 194 NAVSPWAVNTQISP-------PDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCL 245
           NAV+P    T +         P+      ++  ++ A  +PL R+  P +++ +V FL  
Sbjct: 193 NAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVS 252
Query: 246 PAASYITGQVISIDGG 261
               ++ G+V+++DGG
Sbjct: 253 KEGEWVNGKVLTLDGG 268

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 124/257 (48%), Gaps = 14/257 (5%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVC 74
           + G  A++TG + GIG AI E  A+ GA +    R  + ++E  +  + K G +V     
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  +  + ++E+V S F G  +ILVNNA     +   E   E++      +V ++  L
Sbjct: 65  DVATPEGVDAVVESVRSSFGGA-DILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRL 123
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +   P ++A G  +I+  +S+     +     Y  +K A+   +K LA E   D+IRVN
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 195 AVSPWAVNT--------QISPPDLNDLLVQEYVKLIA--KTPLARSAEPNEISPLVAFLC 244
            ++P  + T        +++  +  D   + Y++ +A    P+ R A P E++    FLC
Sbjct: 184 CINPGLILTPDWIKTAKELTKDNGGDW--KGYLQSVADEHAPIKRFASPEELANFFVFLC 241
Query: 245 LPAASYITGQVISIDGG 261
              A+Y  G    +DGG
Sbjct: 242 SERATYSVGSAYFVDGG 258

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 114/250 (45%), Gaps = 7/250 (2%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A+VTG + GIG A     AR GA V    R+ N + E   E    G +      D
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 76  LSFGDQ--REKLIETVSSVFDGKLNILVNNA-ALVVMKRATEYTLEEYSSVMSTNVESSY 132
           +  GD+   E L+E     F G L+   NNA AL  M   +  ++E +   + TN+ S++
Sbjct: 66  V--GDEALHEALVELAVRRFGG-LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAF 122
Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAIS-IPRLSAYAASKGAINQLTKNLACEWATDSI 191
              +   P + A G  S+ F SS  G  +    ++ YAASK  +  L + LA E     I
Sbjct: 123 LAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGI 182
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RVNA+ P   +T  +  +L     +    +     L R A P EI+    +L    AS++
Sbjct: 183 RVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFV 242
Query: 252 TGQVISIDGG 261
           TG  +  DGG
Sbjct: 243 TGAALLADGG 252

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 21/268 (7%)
Query: 7   PVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG 66
           P F +K       T ++TG + GIG       A+ GA+V   GR    + E  Q     G
Sbjct: 2   PRFSNK-------TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSG 54
Query: 67  F---KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK----RATEYTLEE 119
               +V   V D++  D ++++I +    F GK+++LVNNA   +        T+  ++ 
Sbjct: 55  VSEKQVNSVVADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDI 113
Query: 120 YSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT 179
           Y   +  N+++   + +   P L AS    +   S VAG  + P    YA +K A++Q T
Sbjct: 114 YHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYT 173
Query: 180 KNLACEWATDSIRVNAVSPWAVNTQISPP-DLNDLLVQEYVKLIAK----TPLARSAEPN 234
           ++ A + A   IRVN+VSP  V T  +    + D   Q++   +A      P+  + +P 
Sbjct: 174 RSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE 233
Query: 235 EISPLVAFLCLPAAS-YITGQVISIDGG 261
            I+ ++ FL     S YI GQ I  DGG
Sbjct: 234 HIANIILFLADRNLSFYILGQSIVADGG 261

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 21/249 (8%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           +R    LV   +RGIG A+ + L++ GA V  C R++ ++      +          VCD
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 67
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           L      + L E V  V     +ILV NA         E T E++   + +   +   + 
Sbjct: 68  LR--KDLDLLFEKVKEV-----DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 120
Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P +K  G   IV ++S +    I  L    +++ A+    K L+ E A   I VN 
Sbjct: 121 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 180
Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLI-AKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           V+P    T+     + +LL +E  K + ++ P+ R A+P EI+ +VAFLC   ASY+TGQ
Sbjct: 181 VAPGWTETE----RVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQ 236
Query: 255 VISIDGGYT 263
            I +DGG +
Sbjct: 237 TIVVDGGLS 245

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 23/268 (8%)
Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK------ 65
           K + L    A+VTGG+ GIG A VE L   GA+V  C RD     ER++  ES       
Sbjct: 2   KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD----GERLRAAESALRQRFP 57
Query: 66  GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMS 125
           G ++  SVCD+    Q     E       G  +ILVNNA    +    E T E +S  + 
Sbjct: 58  GARLFASVCDVLDALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQ 116
Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
               S  H  +   P L++  +A+IV ++S+  +   P + A +A++  +  L +++A E
Sbjct: 117 LKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFE 176
Query: 186 WATDSIRVNAV-------SPWAVNTQISPPDLNDLLVQEYVKLIAKT---PLARSAEPNE 235
           +A   +RVN +         W    +       D    ++   +A+    PL R  +P E
Sbjct: 177 FAPKGVRVNGILIGLVESGQWRRRFEAREERELDW--AQWTAQLARNKQIPLGRLGKPIE 234
Query: 236 ISPLVAFLCLPAASYITGQVISIDGGYT 263
            +  + FL  P ++Y TG  I + GG +
Sbjct: 235 AARAILFLASPLSAYTTGSHIDVSGGLS 262

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 129/264 (48%), Gaps = 29/264 (10%)
Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           TA++TG T GIG AI   LA+ GA++        ++N      E +   VT  V  LS G
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANI--------VLNGFGAPDEIR--TVTDEVAGLSSG 76
Query: 80  D---------QREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
                     +  ++ +  + V D  G  +ILVNNA +  +++  ++ +E++  +++ N+
Sbjct: 77  TVLHHPADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNL 136
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            SS+H  + A P  K  G   I+ ++S  G ++ P  SAY A+K  I  LTK +A E A 
Sbjct: 137 SSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAE 196
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDL-----LVQEYV---KLIAKTPLARSAEPNEISPLV 240
             + VN++ P  V T +    + D      + +E V     +   P  +     +++ L 
Sbjct: 197 SGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQVASLA 256
Query: 241 AFLCLPAASYITGQVISIDGGYTA 264
            +L    A+ ITG  +S DGG+TA
Sbjct: 257 LYLAGDDAAQITGTHVSXDGGWTA 280

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 115/257 (44%), Gaps = 18/257 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G TAL+TG  RGIG A  E   R GA V     D N+   R    E     +  + C 
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIA--DINLEAARATAAE-----IGPAACA 55
Query: 76  LSFGDQREKLIET-VSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           ++     +  I+  V+ + D  G ++ILVNNAAL  +    E T E Y  + + NV  + 
Sbjct: 56  IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTL 115
Query: 133 HLCQ-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
            + Q +A  ++       I+ M+S AG      +  Y A+K A+  LT++         I
Sbjct: 116 FMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 175
Query: 192 RVNAVSPWAVNTQ------ISPPDLNDLLVQEYVKLI-AKTPLARSAEPNEISPLVAFLC 244
            VNA++P  V+ +          D  +L   E  + + A  P  R     +++ +  FL 
Sbjct: 176 NVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLA 235
Query: 245 LPAASYITGQVISIDGG 261
            P A YI  Q  ++DGG
Sbjct: 236 TPEADYIVAQTYNVDGG 252

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 13/256 (5%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER-IQEWESKGFKVTGSVC 74
           L G  ALVTG  RGIG A+   L R GA V     +     E+ + E ++ G        
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+    +  KL +   + F G L+I V+N+ +V      + T EE+  V S N    + +
Sbjct: 76  DIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFV 134
Query: 135 CQLAHPLLKASGNASIVFMSS-VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A+  L   G   IV  SS  +   S+P+ S ++ SKGA++   +  + +     I V
Sbjct: 135 AREAYRHLTEGGR--IVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKITV 192
Query: 194 NAVSPWAVNTQISP-------PDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCL 245
           NAV+P    T +         P+      ++  ++ A  +PL R+  P +++ +V FL  
Sbjct: 193 NAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVS 252
Query: 246 PAASYITGQVISIDGG 261
               ++ G+V+++DGG
Sbjct: 253 KEGEWVNGKVLTLDGG 268

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 126/249 (50%), Gaps = 12/249 (4%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           A VTGG  GIG +I + L + G  V   CG +     + +++ ++ GF    S  ++   
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDW 75
Query: 80  DQREKLIETVSSVFDGKLNILVNNAAL---VVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           D  ++  + V +   G++++LVNNA +   VV ++ T    E++ +V+ TN+ S +++ +
Sbjct: 76  DSTKQAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTR---EDWQAVIDTNLTSLFNVTK 131
Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
                +   G   I+ +SSV G       + Y+ +K  I+  T +LA E AT  + VN V
Sbjct: 132 QVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTV 191
Query: 197 SPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI 256
           SP  + T +      D+L     K++A  P+ R   P+EI  +VA+L    + + TG   
Sbjct: 192 SPGYIGTDMVKAIRPDVLE----KIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF 247
Query: 257 SIDGGYTAG 265
           S++GG   G
Sbjct: 248 SLNGGLHMG 256

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 125/257 (48%), Gaps = 22/257 (8%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK------VTGSVCD 75
           L+TGG  G+G A    LA  GA +       ++ +E ++  ++   +      V  +V D
Sbjct: 17  LITGGGSGLGRATAVRLAAEGAKLSLV----DVSSEGLEASKAAVLETAPDAEVLTTVAD 72
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATE-YTLEEYSSVMSTNVESSYHL 134
           +S   Q E  +   +  F G+++   NNA +   +  TE +T  E+  V+S N+   +  
Sbjct: 73  VSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 131
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +    +++  G+  +V  +SV G   I   S YAA+K  +  LT+N A E+    IR+N
Sbjct: 132 LEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRIN 191
Query: 195 AVSPWAVNTQISPPDLNDL-------LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
           A++P A+ T +    +  L         +E++++    P  R  E  EI+ +VAFL    
Sbjct: 192 AIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV---NPSKRYGEAPEIAAVVAFLLSDD 248
Query: 248 ASYITGQVISIDGGYTA 264
           ASY+   V+ IDGG +A
Sbjct: 249 ASYVNATVVPIDGGQSA 265

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 131/258 (50%), Gaps = 18/258 (6%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+    +VTG   GIG AI ++ A   + V      ++ +N+ +QE    G +V G   
Sbjct: 4   SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63
Query: 75  DLSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRAT---EYTLEEYSSVMSTNVE 129
           D+S   +++ + E V   F+   ++++L NNA   +M   T   E + E +  V++ N+ 
Sbjct: 64  DVS---KKKDVEEFVRRTFETYSRIDVLCNNAG--IMDGVTPVAEVSDELWERVLAVNLY 118
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S+++  +   P++   G   IV  +S+AG       + Y  +K  +  LT+++A  +   
Sbjct: 119 SAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQ 178
Query: 190 SIRVNAVSPWAVNTQI----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
            IR  AV P  V T I    S P  ++L ++   KL++ +  +R AEP +I+ ++ FL  
Sbjct: 179 GIRAVAVLPGTVKTNIGLGSSKP--SELGMRTLTKLMSLS--SRLAEPEDIANVIVFLAS 234
Query: 246 PAASYITGQVISIDGGYT 263
             AS++ G  + +DGG T
Sbjct: 235 DEASFVNGDAVVVDGGLT 252

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 115/260 (44%), Gaps = 17/260 (6%)
Query: 9   FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK 68
           F      L    A++TG T GIG A  +     GA V   GR +++++  I E       
Sbjct: 20  FQSXTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVG 79
Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
           +     +L+   + ++L E V +   G++++L  NA         E T E+Y      NV
Sbjct: 80  IQADSANLA---ELDRLYEKVKAE-AGRIDVLFVNAGGGSXLPLGEVTEEQYDDTFDRNV 135
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           +      Q A PLL A G+ S+V   S AG+   P  S YAASK A+    +N   +   
Sbjct: 136 KGVLFTVQKALPLL-ARGS-SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKD 193
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-------LIAKTPLARSAEPNEISPLVA 241
             IR+N +SP    T      L +L  ++ V+       L A+ P  R     E++    
Sbjct: 194 RGIRINTLSPGPTET----TGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAAL 249
Query: 242 FLCLPAASYITGQVISIDGG 261
           FL    +S++TG  + +DGG
Sbjct: 250 FLASDDSSFVTGAELFVDGG 269

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 18/255 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC- 74
           L G T ++TGG RG+G     +    GA V        ++ + + E  +   +  G    
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARV--------VLADVLDEEGAATARELGDAAR 54
Query: 75  ----DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
               D++  +  ++++      F G ++ LVNNA +         ++E +  V+  N+  
Sbjct: 55  YQHLDVTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTG 113
Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
            +   +   P +K +G  SIV +SS AG + +   S+Y ASK  +  L+K  A E  TD 
Sbjct: 114 VFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDR 173
Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           IRVN+V P    T    P   +  +++       TP+ R  EP EI+  V  L    +SY
Sbjct: 174 IRVNSVHPGMTYT----PMTAETGIRQGEGNYPNTPMGRVGEPGEIAGAVVKLLSDTSSY 229
Query: 251 ITGQVISIDGGYTAG 265
           +TG  +++DGG+T G
Sbjct: 230 VTGAELAVDGGWTTG 244

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 116/249 (46%), Gaps = 26/249 (10%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL G  A+VTG +RGIG AI  +L   GA V    RD   +    +E  + G +     C
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA-------LVVMKRATEYTLEEYSSVMSTN 127
           DLS  D        V +   G+ ++LVNNA        L  MK A      E+ ++++ N
Sbjct: 86  DLSHSDAIAAFATGVLAAH-GRCDVLVNNAGVGWFGGPLHTMKPA------EWDALIAVN 138
Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           +++ Y L +   P + A+    I+ +SS+AG   +   +AY ASK  +N L  + A E  
Sbjct: 139 LKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELR 198
Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
              +RV+ V+P +V T+              V L AK     + EP++I+ +VA L   A
Sbjct: 199 QHQVRVSLVAPGSVRTEFG------------VGLSAKKSALGAIEPDDIADVVALLATQA 246
Query: 248 ASYITGQVI 256
                 +V+
Sbjct: 247 DQSFISEVL 255

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 123/257 (47%), Gaps = 14/257 (5%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVC 74
           + G  A++TG + GIG AI E  A+ GA +    R  + ++E  +  + K G +V     
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  +  + ++E+V S F G  +ILVNNA     +   E   E++       V ++  L
Sbjct: 65  DVATPEGVDAVVESVRSSFGGA-DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRL 123
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +   P ++A G  +I+  +S+     +     Y  +K A+   +K LA E   D+IRVN
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 195 AVSPWAVNT--------QISPPDLNDLLVQEYVKLIA--KTPLARSAEPNEISPLVAFLC 244
            ++P  + T        +++  +  D   + Y++ +A    P+ R A P E++    FLC
Sbjct: 184 CINPGLILTPDWIKTAKELTKDNGGDW--KGYLQSVADEHAPIKRFASPEELANFFVFLC 241
Query: 245 LPAASYITGQVISIDGG 261
              A+Y  G    +DGG
Sbjct: 242 SERATYSVGSAYFVDGG 258

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 8/246 (3%)
Query: 21  ALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           ALVTG +RG+G A    LA  G + V    R +    E  +E E  G KV     ++   
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQP 66
Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
            + +++ + +   F G+L++ VNNAA  V++   E     +   M+ N ++     Q A 
Sbjct: 67  AKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAA 125
Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
            L++ +G   IV +SS+     +   +    SK A+  LT+ LA E +   I VNAVS  
Sbjct: 126 KLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGG 185
Query: 200 AVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
           A++T      P+  DLL          TP  R  E  ++   V FL    A  I GQ I 
Sbjct: 186 AIDTDALKHFPNREDLLEDAR----QNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTII 241
Query: 258 IDGGYT 263
           +DGG +
Sbjct: 242 VDGGRS 247

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 69  VTGSVCDLSF-GDQREK-----LIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS 122
           V G   DL   GD RE      L   V++   G+L+I+VNNA ++   R TE T  ++S 
Sbjct: 62  VAGIAADLHLPGDLREAAYADGLPGAVAAGL-GRLDIVVNNAGVISRGRITETTDADWSL 120
Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
            +  NVE+ + +C+ A PL  A+G  +IV ++S  G    P  + Y  +K A+  LT+  
Sbjct: 121 SLGVNVEAPFRICRAAIPLXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCX 180
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQE-------YVKLIAKTPLARSAEPNE 235
             + A   IR+NAV P  VNT    P L     +          +L    PL R AEP +
Sbjct: 181 GXDHAPQGIRINAVCPNEVNT----PXLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPED 236
Query: 236 ISPLVAFLCLPAASYITGQVISIDGG 261
           I+ +V FL   AA Y+ G ++ ++GG
Sbjct: 237 IADVVLFLASDAARYLCGSLVEVNGG 262

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 122/247 (49%), Gaps = 14/247 (5%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-WESKGFKVTGSVCDLSFG 79
           AL+T GT+G+G  + E+L   G SV           E ++E ++    ++     D++  
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRA--TEYTLEEYSSVMSTNVESSYHLCQL 137
           +   K++E   S F GK++ L+NNA   V +R    +Y  +E++ ++  N+ + +HL +L
Sbjct: 70  EDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKL 128
Query: 138 AHPLLKASGNASIVFMSSVAGAISIP---RLSAYAASKGAINQLTKNLACEWATDSIRVN 194
             P+++   N   +      GA S P     SA+AA+K  +  LTK +A E A   I  N
Sbjct: 129 VVPVMRKQ-NFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITAN 187
Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAASYITG 253
            V P  +       ++ +  +QE  +L    TP+ RS    +I+  ++FLC   +  ITG
Sbjct: 188 MVCPGDI-----IGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITG 242
Query: 254 QVISIDG 260
            +I + G
Sbjct: 243 TIIEVTG 249

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 123/267 (46%), Gaps = 16/267 (5%)
Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-- 67
           G       G + ++TG + GIG +     A+ GA V   GR+++ + E  Q+    G   
Sbjct: 18  GSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPA 77
Query: 68  -KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA--LVVMKRATEYTLEEYSSVM 124
            K+   V D++    ++ +I T  + F GK++ILVNNA   L      T+  +E Y    
Sbjct: 78  EKINAVVADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTF 136
Query: 125 STNVESSYHLCQ-LAHPLLKASGNASIVFMSS-VAGAISIPRLSAYAASKGAINQLTKNL 182
             N ++   + Q     L+K  G   IV +SS VAG  +      YA +K A++Q T+  
Sbjct: 137 KLNFQAVIEMTQKTKEHLIKTKG--EIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCT 194
Query: 183 ACEWATDSIRVNAVSPWAVNTQIS-----PPDLNDLLVQEYVKLIAKTPLARSAEPNEIS 237
           A +     +RVN+VSP AV T        P   +D L           P+    +P EI+
Sbjct: 195 AIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA 254
Query: 238 PLVAFLC-LPAASYITGQVISIDGGYT 263
            ++ FL     +SYI GQ I  DGG T
Sbjct: 255 NIIVFLADRNLSSYIIGQSIVADGGST 281

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC- 74
           L G   LVTG  +GIG   V+ L   GA V    R Q  ++  ++E    G +    VC 
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE--CPGIE---PVCV 59
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL   +  E+ + +V     G +++LVNNAA+ +++   E T E +      N+ +   +
Sbjct: 60  DLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 135 CQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            Q+    L A G   +IV +SS     ++   S Y ++KGA++ LTK +A E     IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NAV+P  V T +     +D    +   ++ + PL + AE   +   + FL    +   TG
Sbjct: 175 NAVNPTVVMTSMGQATWSD--PHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG 232
Query: 254 QVISIDGGYTA 264
             + ++GG+ A
Sbjct: 233 STLPVEGGFWA 243

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC- 74
           L G   LVTG  +GIG   V+ L   GA V    R Q  ++  ++E    G +    VC 
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE--CPGIE---PVCV 59
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL   +  E+ + +V     G +++LVNNAA+ +++   E T E +      N+ +   +
Sbjct: 60  DLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 135 CQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            Q+    L A G   +IV +SS     ++   S Y ++KGA++ LTK +A E     IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NAV+P  V T +     +D    +   ++ + PL + AE   +   + FL    +   TG
Sbjct: 175 NAVNPTVVMTSMGQATWSD--PHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG 232
Query: 254 QVISIDGGYTA 264
             + ++GG+ A
Sbjct: 233 STLPVEGGFWA 243

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 22/267 (8%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG-------------RDQNMINERIQE 61
           SL+G  A +TG  RG G +    LA  GA +  C                   ++E  + 
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71
Query: 62  WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS 121
            E +G K    V D+       +L+      F G+L+++V NA ++   R  E T E++ 
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWD 130
Query: 122 SVMSTNVESSYHLCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
           +V+  N+  ++   +   P +  +GN  SIV +SS AG  + P    Y+ASK  +  LT 
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190
Query: 181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPN------ 234
            LA E     IRVN++ P++V T +  P+    +   +   +   P     +PN      
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFP-PMPVQPNGFMTAD 249
Query: 235 EISPLVAFLCLPAASYITGQVISIDGG 261
           E++ +VA+L    +  +TG  I +D G
Sbjct: 250 EVADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 23/248 (9%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
            +  G  ALVTG +RGIG AI E LA  GA V      +N   + I ++     K  G +
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYLGANGK--GLM 57
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            +++     E ++E + + F G+++ILVNNA +           EE++ ++ TN+ S + 
Sbjct: 58  LNVTDPASIESVLEKIRAEF-GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFR 116
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +     +    +  I         I+I   + YAA+K  +   +K+LA E A+  I V
Sbjct: 117 LSKAVMRAMMKKRHGRI---------ITIGGQANYAAAKAGLIGFSKSLAREVASRGITV 167
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N V+P  + T       +D    +   ++A+ P  R     EI+  VAFL    A+YITG
Sbjct: 168 NVVAPGFIETS------DD----QRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITG 217
Query: 254 QVISIDGG 261
           + + ++GG
Sbjct: 218 ETLHVNGG 225

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 9/247 (3%)
Query: 17  RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           +G  A+V GGT G G A V  L   GA V   GR+++ I    +E+  +   +   + DL
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 66
Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           +       ++   +    G +++L  NA +  ++   + +   Y    + N + ++   Q
Sbjct: 67  N----EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 122
Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
              PL++  G  SIVF SSVA     P  S Y+ASK A+      LA E     IRVN+V
Sbjct: 123 RLTPLIREGG--SIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSV 180
Query: 197 SPWAVNTQISP-PDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           SP  ++T       + +    E+  L    TP  R+   +E++  V FL    A++ TG 
Sbjct: 181 SPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE-ATFTTGA 239
Query: 255 VISIDGG 261
            +++DGG
Sbjct: 240 KLAVDGG 246

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 9/247 (3%)
Query: 17  RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           +G  A+V GGT G G A V  L   GA V   GR+++ I    +E+  +   +   + DL
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL 65
Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
           +       ++   +    G +++L  NA +  ++   + +   Y    + N + ++   Q
Sbjct: 66  N----EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 121
Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
              PL++  G  SIVF SSVA     P  S Y+ASK A+      LA E     IRVN+V
Sbjct: 122 RLTPLIREGG--SIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSV 179
Query: 197 SPWAVNTQISP-PDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           SP  ++T       + +    E+  L    TP  R+   +E++  V FL    A++ TG 
Sbjct: 180 SPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAFE-ATFTTGA 238
Query: 255 VISIDGG 261
            +++DGG
Sbjct: 239 KLAVDGG 245

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 10/244 (4%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
            +VTG   GIG A  E LAR GA+V     +        ++  + G        D+S  +
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPE 71
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTL--EEYSSVMSTNVESSYHLCQL 137
             + + +   + F G ++ LVNNAA+   MK     T+  E Y   MS N++ +    + 
Sbjct: 72  SAKAMADRTLAEF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRA 130
Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
            +  +   G  +IV  SS A  +     + Y  +K  IN LT+ L+ E    +IR+NA++
Sbjct: 131 VYKKMTKRGGGAIVNQSSTAAWL---YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIA 187
Query: 198 PWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
           P  ++T+ +       +V + VK +   PL+R   P+++  +  FL    AS+ITGQ+ +
Sbjct: 188 PGPIDTEANRTTTPKEMVDDIVKGL---PLSRMGTPDDLVGMCLFLLSDEASWITGQIFN 244
Query: 258 IDGG 261
           +DGG
Sbjct: 245 VDGG 248

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 7/242 (2%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ-EWESKGFKVTGSVCDLSFG 79
           A+VTG +RGIG AI   LA  G +V      +    E +  + E+ G K   +  D+S  
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDP 89
Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
               +L  T    F G +++LVNNA +  +    E     +  V++ N++ +++  + A 
Sbjct: 90  AAVRRLFATAEEAF-GGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLREAA 148
Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
             L+  G   I+  S+    +  P    YAA+K  +   T  L+ E     I VNAV+P 
Sbjct: 149 QRLRVGGR--IINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRGRDITVNAVAPG 206
Query: 200 AVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISID 259
              T +     +D +   + KL    PL R   P +I+  VAFL  P  +++ GQV+  +
Sbjct: 207 PTATDLFLEGKSDEVRDRFAKL---APLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRAN 263
Query: 260 GG 261
           GG
Sbjct: 264 GG 265

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 6   EPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK 65
           E +FG     LRG TALVTG +RGIG AI E LA  GA V   G          Q   + 
Sbjct: 26  ETIFG-----LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS 80
Query: 66  GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMS 125
           G        DLS       LIE   ++    ++ILV NA+  +    +  T  + +  ++
Sbjct: 81  GGTAQELAGDLSEAGAGTDLIERAEAI--APVDILVINASAQINATLSALTPNDLAFQLA 138
Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            N+ S+  + Q A P + A     +V + S+        ++AYAA+K A + L ++ A +
Sbjct: 139 VNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARD 198
Query: 186 WATDSIRVNAVSPWAVNT------QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL 239
           +A D++ +N ++P  V+T      +   P+  D    EYV+ +    + R+  P E+   
Sbjct: 199 FAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWD----EYVRTL--NWMGRAGRPEEMVGA 252
Query: 240 VAFLCLPAASYITGQVISIDGGY 262
             FL   A S++TG+ I + GGY
Sbjct: 253 ALFLASEACSFMTGETIFLTGGY 275

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
Query: 15  SLRGMTALVTG--GTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWE-SKGFKVT 70
           SL+G   +VTG  G +G+G       A  GA+V  T         E ++E E + G K  
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76
Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
              C +   +  EKL++ V + F G+++  + NA         + ++E ++ V+  ++  
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNG 135
Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAIS-IPR-LSAYAASKGAINQLTKNLACEWAT 188
           ++H  +      K  G  S+V  +S++G I+  P+  ++Y  +K     + ++LA EW  
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW-R 194
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKL-IAKTPLARSAEPNEISPLVAFLCLPA 247
           D  RVN++SP  ++T +S     D + +E  +L  +  P+ R     E+     +    A
Sbjct: 195 DFARVNSISPGYIDTGLS-----DFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDA 249
Query: 248 ASYITGQVISIDGGYT 263
           ++Y TG  + IDGGYT
Sbjct: 250 STYTTGADLLIDGGYT 265

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 95  GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIV-FM 153
           G+++ LVNNA + + K   E T E+Y   +  NV   +H+ Q A       G+  IV   
Sbjct: 95  GRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAAAEXLKQGSGHIVSIT 154
Query: 154 SSVAGAISIPRLSAYAA-SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND 212
           +S+     +   SA A+ +KG +N +T++LA E++   +RVNAVSP  + T   P + + 
Sbjct: 155 TSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKTPXHPAETHS 214
Query: 213 LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG 265
            L   +       P+ R  E  ++  + A L L  A +ITG+++ +DGG  AG
Sbjct: 215 TLAGLH-------PVGRXGEIRDV--VDAVLYLEHAGFITGEILHVDGGQNAG 258

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 19/256 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC- 74
           L G T ++TGG RG+G     +    GA V        ++ + + E  +   +  G    
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARV--------VLADVLDEEGAATARELGDAAR 54
Query: 75  ----DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
               D++  +  ++++      F G ++ LVNNA +         ++E +  V+  N+  
Sbjct: 55  YQHLDVTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTG 113
Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
            +   +   P +K +G  SIV +SS AG + +   S+Y ASK  +  L+K  A E  TD 
Sbjct: 114 VFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDR 173
Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSA-EPNEISPLVAFLCLPAAS 249
           IRVN+V P    T    P   +  +++       TP+ R   EP EI+  V  L    +S
Sbjct: 174 IRVNSVHPGMTYT----PMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSS 229
Query: 250 YITGQVISIDGGYTAG 265
           Y+TG  +++DGG+T G
Sbjct: 230 YVTGAELAVDGGWTTG 245

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 21/268 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGA---SVHTCGR----------DQNMINERIQEW 62
           L G  A +TG  RG G A    +A  GA   +V   G+            + ++E ++  
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 63  ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS 122
           E+   ++  +V D    D+  K+++   +   G+L+I+V NA +   +   + T E++  
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRD 127
Query: 123 VMSTNVESSYHLCQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN 181
           VM  NV  +++      P +++     SI+ +SS AG    P +  Y ASK A+  L + 
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARA 187
Query: 182 LACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ--EYVKLIAK--TPLARS--AEPNE 235
            A E    SIRVN+V P  VNT +   D+   + Q  E    ++   TP      AEP +
Sbjct: 188 FAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPED 247
Query: 236 ISPLVAFLCLPAASYITGQVISIDGGYT 263
           I+  V +L    +  +T   I +D G T
Sbjct: 248 IADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 21/256 (8%)
Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G    VTG  +GIGYA        GA V   G DQ    E+        +     V D++
Sbjct: 7   GKNVWVTGAGKGIGYATALAFVEAGAKV--TGFDQAFTQEQ--------YPFATEVMDVA 56
Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
              Q  ++ + + +  + +L+ LVN A ++ M    + + E++    + NV  +++L Q 
Sbjct: 57  DAAQVAQVCQRLLAETE-RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQ 115
Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
                +     +IV ++S A       +SAY ASK A+  L  ++  E A   +R N VS
Sbjct: 116 TMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVS 175
Query: 198 PWAVNTQIS-----PPDLNDLLVQ---EYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           P + +T +        D  +  ++   E  KL    PL + A P EI+  + FL    AS
Sbjct: 176 PGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKL--GIPLGKIARPQEIANTILFLASDLAS 233
Query: 250 YITGQVISIDGGYTAG 265
           +IT Q I +DGG T G
Sbjct: 234 HITLQDIVVDGGSTLG 249

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 118/251 (47%), Gaps = 20/251 (7%)
Query: 22  LVTGGTRGIGYAIVEELARFGASV---HTCGRDQ-NMINERIQEWESKGFKVTGSVCDLS 77
           LVTGG+RGIG A+    AR G  V   +   R+  + +   I E   +   + G V + +
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAA 89
Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLC- 135
                      V   F G+L+ LVNNA +V   +R  E ++E     +  NV  S  LC 
Sbjct: 90  ---DIAAXFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSI-LCA 144
Query: 136 ----QLAHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWATDS 190
               +    L    G A IV +SS A  + S  +   YAASK AI+  T  LA E A + 
Sbjct: 145 AEAVRRXSRLYSGQGGA-IVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEG 203
Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           IRVNAV P  + T +     +  L     +     P  R+  P E++  + +L  P+ASY
Sbjct: 204 IRVNAVRPGIIETDLHA---SGGLPDRAREXAPSVPXQRAGXPEEVADAILYLLSPSASY 260
Query: 251 ITGQVISIDGG 261
           +TG ++++ GG
Sbjct: 261 VTGSILNVSGG 271

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 10/248 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G TALVTG  +GIG AI   LA  GA+V     D N    +     S G K      D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVS--DINAEGAKAAA-ASIGKKARAIAAD 60
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S     + L   + +   G ++ILVNNA++V      +  L+ +  ++  N+  ++ + 
Sbjct: 61  ISDPGSVKALFAEIQA-LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 136 QLAHPLLKASGNAS-IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           +     ++A+G A  ++ ++S       P ++AY A+KG +   T+ LA E    +I  N
Sbjct: 120 RAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITAN 179
Query: 195 AVSPWAVNTQ-ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           AV+P  + +  +     N+     +V+++    +    +P  I+ +V+FL    A +ITG
Sbjct: 180 AVTPGLIESDGVKASPHNEAF--GFVEML--QAMKGKGQPEHIADVVSFLASDDARWITG 235
Query: 254 QVISIDGG 261
           Q +++D G
Sbjct: 236 QTLNVDAG 243

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 18/257 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV------ 69
           LR   ALVTG   GIG A+   LA  GA+V  C  D+    E ++     G K       
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64
Query: 70  -TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
                 D+S       L+E V + F    +++V+ A +   +     + +++  V++ N+
Sbjct: 65  HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNL 124
Query: 129 ESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           + ++ + Q A   L ++G   SI+ +SS+ G +     + YAASK  +  LT+  A E  
Sbjct: 125 KGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELG 184
Query: 188 TDSIRVNAVSPWAVN---TQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
              IR N+V P  +    TQ  P  + D       K+    P+    +P +++ +VAFL 
Sbjct: 185 RHGIRCNSVLPGFIATPMTQKVPQKVVD-------KITEMIPMGHLGDPEDVADVVAFLA 237
Query: 245 LPAASYITGQVISIDGG 261
              + YITG  + + GG
Sbjct: 238 SEDSGYITGTSVEVTGG 254

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 118/256 (46%), Gaps = 30/256 (11%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           L+TGG+RGIG A     AR G +V      +    +E +++    G +      D++   
Sbjct: 29  LITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVA--K 86
Query: 81  QREKL--IETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
           +RE L   ETV +   G+L+ LVNNA +V    R    TLE        NV  S+ LC  
Sbjct: 87  EREVLAXFETVDAQL-GRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSF-LC-- 142
Query: 138 AHPLLK------ASGNASIVFMSSVAGAISIP-RLSAYAASKGAINQLTKNLACEWATDS 190
           A   +K           SIV +SS A  +  P +   YAA+KGAI+  T  LA E AT+ 
Sbjct: 143 AREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEG 202
Query: 191 IRVNAVSPWAVNTQIS-----PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
           IRVNAV P  + T I      P    D+  Q         P  R+    E++  + +L  
Sbjct: 203 IRVNAVRPGIIETDIHASGGLPNRARDVAPQ--------VPXQRAGTAREVAEAIVWLLG 254
Query: 246 PAASYITGQVISIDGG 261
             ASY TG ++ + GG
Sbjct: 255 DQASYTTGALLDVTGG 270

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 32/259 (12%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+G  ALVTGG  G+G  +V+ L   GA V         INE             G    
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSD-----INE-----------AAGQQLA 47
Query: 76  LSFGDQREKLIETVSSVFD------------GKLNILVNNAALVVMKRATEYTLEEYSSV 123
              G++   +   VSS  D            G LN+LVNNA +++        LE++S +
Sbjct: 48  AELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRL 107
Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTK--N 181
           +  N ES +  CQ     +K +G  SI+ M+SV+  + I + + Y+ASK A++ LT+   
Sbjct: 108 LKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAA 166
Query: 182 LACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA-RSAEPNEISPLV 240
           L+C     +IRVN++ P  + T +    L   + +E V    K   A R+  P  I+ LV
Sbjct: 167 LSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLV 226
Query: 241 AFLCLPAASYITGQVISID 259
            FL    +S ++G  +  D
Sbjct: 227 LFLASDESSVMSGSELHAD 245

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 17/251 (6%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G T LVTG   GIG A ++  AR GAS+    R++ ++ E +    +   +    V D
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALEAEAIAVVAD 60
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S     E +       F G+L+ + + A +     +    LE +  V+  N+  S+ + 
Sbjct: 61  VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 119
Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A  +L+  G  S+V   SVAG +    L+ YAA K  +  L + LA E A   +RVN 
Sbjct: 120 RKAGEVLEEGG--SLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNV 176
Query: 196 VSPWAVNTQIS---PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           + P  + T ++   PP         + + +  +PL R+  P E++    FL    ++YIT
Sbjct: 177 LLPGLIQTPMTAGLPP-------WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYIT 229
Query: 253 GQVISIDGGYT 263
           GQ + +DGG +
Sbjct: 230 GQALYVDGGRS 240

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 11/254 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A+VTG   GIG A+   LA  G  V  C      I+    +  +       + C 
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHV-LC----ADIDGDAADAAATKIGCGAAACR 81
Query: 76  LSFGDQRE--KLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           +   D+++   +++   + F G ++ LV NA +V +    + T+E++  V++ N+  ++ 
Sbjct: 82  VDVSDEQQIIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWL 140
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
             + A P +   G  +IV +SS+AG +++    AY  SK  I QL++  A E  +  IR 
Sbjct: 141 CTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRS 200
Query: 194 NAVSPWAVNT---QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           N + P  V+T   Q +    +  L     + +      R A P E++ +V FL    AS 
Sbjct: 201 NTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASM 260
Query: 251 ITGQVISIDGGYTA 264
           ITG     DGG  A
Sbjct: 261 ITGTTQIADGGTIA 274

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 15/252 (5%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+    L+TG   GIG A +E  A+ GA +  C  ++  + E  +   +    V   V D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH--PVVXDVAD 60
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
            +         E ++ +  G+L+ +V+ A +       +  LE++  V+  N+  S+ + 
Sbjct: 61  PA--SVERGFAEALAHL--GRLDGVVHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVA 116
Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A    +     SIV  +S     ++ + + YAAS   +  LT+ LA E     IRVN 
Sbjct: 117 KAASEAXREKNPGSIVLTASRVYLGNLGQAN-YAASXAGVVGLTRTLALELGRWGIRVNT 175
Query: 196 VSPWAVNTQISPPDLNDLLVQEYV--KLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           ++P  + T+ +        V E V  K IA TPL R+ +P E++    FL    +S+ITG
Sbjct: 176 LAPGFIETRXTAK------VPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITG 229
Query: 254 QVISIDGGYTAG 265
           QV+ +DGG T G
Sbjct: 230 QVLFVDGGRTIG 241

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 120/252 (47%), Gaps = 5/252 (1%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE-RIQEWESKGFKVTGSVC 74
           L G  AL+TG T+GIG  I    A  GA +   GRD + ++  R    E  G  V     
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL+  D   +L    +  F G L++LVNNA +   +   +   + + + ++ N+ +   L
Sbjct: 78  DLAEPDAPAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALL 136
Query: 135 CQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
                  + A+G   +I+ ++S A    +P   AY  SK  +   TK LA E     IR 
Sbjct: 137 ASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRA 196
Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N+V P  V T++      D    +   +IA+ PL R A P+E+S  V +L   AAS I G
Sbjct: 197 NSVCPTVVLTEMGQRVWGD--EAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMING 254
Query: 254 QVISIDGGYTAG 265
             I +DGGYT G
Sbjct: 255 VDIPVDGGYTMG 266

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 23/258 (8%)
Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           D +  L G  A+VTG  RGIG  I E  AR GA  H    D     E + E  SK   V 
Sbjct: 206 DWEKPLDGKVAIVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAETASK---VG 260
Query: 71  GSVC--DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
           G+    D++  D  +K+ E +     GK +ILVNNA +   K         + +V++ N+
Sbjct: 261 GTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNL 320
Query: 129 ESSYHLCQLAHPLLKASGNASI------VFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
            +   L +         GN SI      + +SS+AG       + YA +K  +  +T+ L
Sbjct: 321 LAPLRLTE------GLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQAL 374
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A   A   I +NAV+P  + TQ++      L  +E  + +    L +  +P +++  +A+
Sbjct: 375 APGLAAKGITINAVAPGFIETQMTAA--IPLATREVGRRL--NSLLQGGQPVDVAEAIAY 430
Query: 243 LCLPAASYITGQVISIDG 260
              PA++ +TG VI + G
Sbjct: 431 FASPASNAVTGNVIRVCG 448

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 23/258 (8%)
Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           D +  L G  A+VTG  RGIG  I E  AR GA  H    D     E + E  SK   V 
Sbjct: 198 DWEKPLDGKVAIVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAETASK---VG 252
Query: 71  GSVC--DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
           G+    D++  D  +K+ E +     GK +ILVNNA +   K         + +V++ N+
Sbjct: 253 GTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNL 312
Query: 129 ESSYHLCQLAHPLLKASGNASI------VFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
            +   L +         GN SI      + +SS+AG       + YA +K  +  +T+ L
Sbjct: 313 LAPLRLTE------GLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQAL 366
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A   A   I +NAV+P  + TQ++      L  +E  + +    L +  +P +++  +A+
Sbjct: 367 APGLAAKGITINAVAPGFIETQMTAA--IPLATREVGRRL--NSLLQGGQPVDVAEAIAY 422
Query: 243 LCLPAASYITGQVISIDG 260
              PA++ +TG VI + G
Sbjct: 423 FASPASNAVTGNVIRVCG 440

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 23/258 (8%)
Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           D +  L G  A+VTG  RGIG  I E  AR GA  H    D     E + E  SK   V 
Sbjct: 227 DWEKPLDGKVAIVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAETASK---VG 281
Query: 71  GSVC--DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
           G+    D++  D  +K+ E +     GK +ILVNNA +   K         + +V++ N+
Sbjct: 282 GTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNL 341
Query: 129 ESSYHLCQLAHPLLKASGNASI------VFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
            +   L +         GN SI      + +SS+AG       + YA +K  +  +T+ L
Sbjct: 342 LAPLRLTE------GLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQAL 395
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A   A   I +NAV+P  + TQ++      L  +E  + +    L +  +P +++  +A+
Sbjct: 396 APGLAAKGITINAVAPGFIETQMTA--AIPLATREVGRRL--NSLLQGGQPVDVAEAIAY 451
Query: 243 LCLPAASYITGQVISIDG 260
              PA++ +TG VI + G
Sbjct: 452 FASPASNAVTGNVIRVCG 469

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 23/258 (8%)
Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           D +  L G  A+VTG  RGIG  I E  AR GA  H    D     E + E  SK   V 
Sbjct: 190 DWEKPLDGKVAIVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAETASK---VG 244
Query: 71  GSVC--DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
           G+    D++  D  +K+ E +     GK +ILVNNA +   K         + +V++ N+
Sbjct: 245 GTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNL 304
Query: 129 ESSYHLCQLAHPLLKASGNASI------VFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
            +   L +         GN SI      + +SS+AG       + YA +K  +  +T+ L
Sbjct: 305 LAPLRLTE------GLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQAL 358
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A   A   I +NAV+P  + TQ++      L  +E  + +    L +  +P +++  +A+
Sbjct: 359 APGLAAKGITINAVAPGFIETQMTAA--IPLATREVGRRL--NSLLQGGQPVDVAEAIAY 414
Query: 243 LCLPAASYITGQVISIDG 260
              PA++ +TG VI + G
Sbjct: 415 FASPASNAVTGNVIRVCG 432

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 23/258 (8%)
Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           D +  L G  A+VTG  RGIG  I E  AR GA  H    D     E + E  SK   V 
Sbjct: 214 DWEKPLDGKVAIVTGAARGIGATIAEVFARDGA--HVVAIDVESAAENLAETASK---VG 268
Query: 71  GSVC--DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
           G+    D++  D  +K+ E +     GK +ILVNNA +   K         + +V++ N+
Sbjct: 269 GTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNL 328
Query: 129 ESSYHLCQLAHPLLKASGNASI------VFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
            +   L +         GN SI      + +SS+AG       + YA +K  +  +T+ L
Sbjct: 329 LAPLRLTE------GLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQAL 382
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A   A   I +NAV+P  + TQ++      L  +E  + +    L +  +P +++  +A+
Sbjct: 383 APGLAAKGITINAVAPGFIETQMTAA--IPLATREVGRRL--NSLLQGGQPVDVAEAIAY 438
Query: 243 LCLPAASYITGQVISIDG 260
              PA++ +TG VI + G
Sbjct: 439 FASPASNAVTGNVIRVCG 456

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 11/251 (4%)
Query: 21  ALVTGGTRGIGYAIVEELAR--FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           A+VTGG +GIG  I E+LA   F  +V    + +    E I+  E+   K      D++ 
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD 64
Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
               +  I+  +    G  ++LVNNA +  +K   E T E+   + S NV S +   Q A
Sbjct: 65  KANFDSAIDEAAEKL-GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAA 123
Query: 139 HPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
                  G    I+  +S+A     P LSAY+ +K A+  LT+  A E A     VNA +
Sbjct: 124 SRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYA 183
Query: 198 PWAVNT----QISPP--DLNDLLVQEYVKLIAKT-PLARSAEPNEISPLVAFLCLPAASY 250
           P  V T    QI      +N   + E  K  + +  L R + P +++ LV+FL    ++Y
Sbjct: 184 PGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNY 243
Query: 251 ITGQVISIDGG 261
           +TGQV+ +DGG
Sbjct: 244 VTGQVMLVDGG 254

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 124/246 (50%), Gaps = 12/246 (4%)
Query: 20  TALVTGGTRGIGYAIVEELAR--FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           + LVTG ++GIG AI  +LA   F   VH   RD     E +    + G        D++
Sbjct: 28  SVLVTGASKGIGRAIARQLAADGFNIGVHYH-RDAAGAQETLNAIVANGGNGRLLSFDVA 86
Query: 78  FGDQ-REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
             +Q RE L   ++    G    +V+NA +         + +++ +V+ TN++S Y++ Q
Sbjct: 87  NREQCREVLEHEIAQ--HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQ 144
Query: 137 -LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
               P++ A     I+ +SSV+G +       Y+A+K  I   TK LA E A   I VN 
Sbjct: 145 PCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNC 204
Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           ++P  ++T +   ++ +  ++E + +I   P+ R  +  E++ L ++L    A Y+T QV
Sbjct: 205 IAPGLIDTGM--IEMEESALKEAMSMI---PMKRMGQAEEVAGLASYLMSDIAGYVTRQV 259
Query: 256 ISIDGG 261
           ISI+GG
Sbjct: 260 ISINGG 265

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 10/249 (4%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           + L G  ALVTG T GIG AI       GA V   G  ++ + E   +     F  + ++
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL 82
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D       ++L E      +G ++ILVNNA +           +++  V++ N+ ++  
Sbjct: 83  SDRK---SIKQLAEVAEREMEG-IDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAAST 138
Query: 134 LC-QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           L  +L H +++      I+ ++S+ G +  P  + Y A+K  +   +K LA E A+ +I 
Sbjct: 139 LTRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNIT 197
Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           VN ++P  + + ++   LN+   ++   ++A  P+ R     EI+    +L    A+Y+T
Sbjct: 198 VNCIAPGFIKSAMTDK-LNE---KQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLT 253
Query: 253 GQVISIDGG 261
           GQ + I+GG
Sbjct: 254 GQTLHINGG 262

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 14/250 (5%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G TALVTG  +GIG AI   LA  GA+V     D N    +     S G K      D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVS--DINAEGAKAAA-ASIGKKARAIAAD 60
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S     + L   + +   G ++ILVNNA++V      +  L+ +  ++  N+  ++ + 
Sbjct: 61  ISDPGSVKALFAEIQA-LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 136 QLAHPLLKASGNAS-IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           +      +A+G A  ++ ++S       P  +AY A+KG +   T+ LA E    +I  N
Sbjct: 120 RAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITAN 179
Query: 195 AVSPWAVNT---QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           AV+P  + +   + SP +     V+       K       +P  I+ +V+FL    A +I
Sbjct: 180 AVTPGLIESDGVKASPHNEAFGFVEXLQAXKGK------GQPEHIADVVSFLASDDARWI 233
Query: 252 TGQVISIDGG 261
           TGQ +++D G
Sbjct: 234 TGQTLNVDAG 243

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 109/252 (43%), Gaps = 15/252 (5%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           ALVTG  +GIG AI   L + G +V     +         E    G        D+S  D
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRD 64
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
           Q    +E       G  +++VNNA +         T E    V + NV+      Q A  
Sbjct: 65  QVFAAVEQARKTLGG-FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE 123
Query: 141 LLKASGNAS-IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP- 198
             K  G+   I+   S AG +  P L+ Y++SK A+  LT+  A + A   I VN   P 
Sbjct: 124 AFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPG 183
Query: 199 ------WA-VNTQISPPDLNDLL--VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
                 WA ++ Q+S      L     E+ K I    L R +EP +++  V++L  P + 
Sbjct: 184 IVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT---LGRLSEPEDVAACVSYLASPDSD 240
Query: 250 YITGQVISIDGG 261
           Y+TGQ + IDGG
Sbjct: 241 YMTGQSLLIDGG 252

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-INERIQEWESKGFKVTGSV 73
            L+G   L+TG ++GIG A     AR GA V   GR     I+E I    + G       
Sbjct: 4   DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVESSY 132
            DL+  +  ++L++   + F G +++L+NNA  LV  K   E     Y +VM  N+ S  
Sbjct: 64  ADLATSEACQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122
Query: 133 HLCQLAHPLL----KASGNAS-IVFMSSVA-GAISIPRLSAYAASKGAINQLTKNLACEW 186
              + A P L    KASG  S ++   S+A      P    Y A+K  ++ + KN     
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFH 182
Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
             D +R N VSP  V+T        D  V++  ++    P+ R     E++P   F    
Sbjct: 183 TKDGVRFNIVSPGTVDTAFHADKTQD--VRD--RISNGIPMGRFGTAEEMAPAFLFFASH 238
Query: 247 AAS-YITGQVISIDGG 261
            AS YITGQV+ I+GG
Sbjct: 239 LASGYITGQVLDINGG 254

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 28/274 (10%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM------------INERIQEWE 63
             G TAL+TGG RG+G +    LA  GA +  C R +N             + E +   E
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 64  SKGFKVTGSVCDLSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYS 121
             G +   +  D+     R  L   V+   D  G ++I + NA +  +    E    ++ 
Sbjct: 68  KTGRRCISAKVDVK---DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWD 124
Query: 122 SVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN 181
            V+ TN+  +++      P +       IV +SS+ G  +    ++Y +SK  +  LTK 
Sbjct: 125 EVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKC 184
Query: 182 LACEWATDSIRVNAVSPWAVNTQISP---------PDLNDLLVQEYVKLIAKTPL--ARS 230
            A +     I VNAV+P  + T ++          PDL    +++   + A   L  A  
Sbjct: 185 AAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF 244
Query: 231 AEPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
            +P E++  V FL   A+S+ITG V+ ID G TA
Sbjct: 245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 28/278 (10%)
Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNM---------INE 57
           G     + G  A +TG  RG G +    LAR GA   ++  C +   +         + E
Sbjct: 20  GSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAE 79
Query: 58  RIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVM-KRATEYT 116
            +++ E+ G ++  S  D+   D  +  ++   +   G+L+I++ NAAL     R     
Sbjct: 80  TVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMD 138
Query: 117 LEEYSSVMSTNVESSYHLCQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI 175
            + +  ++  N+  ++   ++A P ++      SIVF SS+ G      +  Y ASK  +
Sbjct: 139 PKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGL 198
Query: 176 NQLTKNLACEWATDSIRVNAVSPWAVNT---------QISPPDLNDLLVQEY---VKLIA 223
           + L + +A E    +IRVN V P +V T         ++  PDL +  V+++    + + 
Sbjct: 199 HGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH 258
Query: 224 KTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG 261
             P+    EP +IS  + FL    A YITG  + +DGG
Sbjct: 259 VLPIP-YVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 9/250 (3%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           LR   A +TGG  GIG+ I E   R G   HT    +++   R+     K    TG  C 
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHG--CHTVIASRSL--PRVLTAARKLAGATGRRCL 80
Query: 76  LSFGDQR--EKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
               D R    ++  V       G+++IL+N AA   +  A   +   + +VM  +   +
Sbjct: 81  PLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGT 140
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           +++ ++ +          IV +++  G           ++K A++ +T++LA EW   +I
Sbjct: 141 FNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNI 200
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RVN+++P  ++       L         K+ A +PL R     EI+  V +L  P ASY+
Sbjct: 201 RVNSLAPGPISGTEGLRRLGGPQASLSTKVTA-SPLQRLGNKTEIAHSVLYLASPLASYV 259
Query: 252 TGQVISIDGG 261
           TG V+  DGG
Sbjct: 260 TGAVLVADGG 269

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           G  A+VTGG  GIG A   E AR GA +     DQ  + + +     +GF   G VCD+ 
Sbjct: 31  GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR 90
Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
             D+  +L +    +  G ++++ +NA +VV     +   +++  V+  ++  S H  + 
Sbjct: 91  HLDEMVRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEA 149
Query: 138 AHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
             P LL+      I F +S AG +    L  Y  +K  +  L + LA E   + I V+ +
Sbjct: 150 FLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVL 209
Query: 197 SPWAVNTQI 205
            P  V T++
Sbjct: 210 CPMVVETKL 218

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 13/261 (4%)
Query: 2   AEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE 61
           A++  P   DK   L G  A+VTG  RGIG  I E  AR GA+V     D +   E ++ 
Sbjct: 199 ADSTPPADWDKP--LDGKVAVVTGAARGIGATIAEVFARDGATVVAI--DVDGAAEDLKR 254
Query: 62  WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS 121
              K    T    D++  D  +K+   V+    GK++ILVNNA +   K       + + 
Sbjct: 255 VADK-VGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWD 313
Query: 122 SVMSTNVESSYHLCQ--LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT 179
           +V++ N+ +   L +  + +  +   G   ++ +SS+AG       + YA +K  +  L 
Sbjct: 314 AVIAVNLLAPQRLTEGLVGNGTIGEGGR--VIGLSSMAGIAGNRGQTNYATTKAGMIGLA 371
Query: 180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL 239
           + LA   A   I +NAV+P  + T+++  +   L  +E  + +    L +  +P +++ L
Sbjct: 372 EALAPVLADKGITINAVAPGFIETKMT--EAIPLATREVGRRL--NSLFQGGQPVDVAEL 427
Query: 240 VAFLCLPAASYITGQVISIDG 260
           +A+   PA++ +TG  I + G
Sbjct: 428 IAYFASPASNAVTGNTIRVCG 448

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 38  LARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL 97
            A+ GA V   GR +  + E   E E    ++     D+   D  +K IE +   F G++
Sbjct: 26  FAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKF-GRI 84
Query: 98  NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ-LAHPLLKASGNASIVFMSSV 156
           +IL+NNAA   +  A + ++  ++SV++  +  +++  Q +    ++     +I+   + 
Sbjct: 85  DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINXVAT 144
Query: 157 AGAISIPRLSAYAASKGAINQLTKNLACEWATD-SIRVNAVSPWAVNTQISPPDLNDLLV 215
               + P +   AA+K  +   TK LA EW     IRVNA++P  +        L   + 
Sbjct: 145 YAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKL--WIS 202
Query: 216 QEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG 261
           +E  K  I   PL R   P EI+ L  +LC   A+YI G   + DGG
Sbjct: 203 EEXAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCXTXDGG 249

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 116/253 (45%), Gaps = 11/253 (4%)
Query: 11  DKKWSLRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF- 67
           D    L+G   LVT   GT GIG          GA V      +  + E   +    G  
Sbjct: 15  DGHGLLKGKVVLVTAAAGT-GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG 73
Query: 68  KVTGSVCDLSFGDQREKLI-ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMST 126
           +V   VCD++  +  + LI +TV     G+L++LVNNA L       + T EE+  V++ 
Sbjct: 74  RVEAVVCDVTSTEAVDALITQTVEKA--GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNV 131
Query: 127 NVESSYHLCQLAHPLLKASGNAS-IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            + S     + A    +   +   IV  +SV G  +    S YAA+K  +  LT+  A E
Sbjct: 132 TLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIE 191
Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
                +R+NAVSP     +      +  L+    +L +     R+AEP E++  +AFL  
Sbjct: 192 AVEFGVRINAVSPSIARHKFLEKTSSSELLD---RLASDEAFGRAAEPWEVAATIAFLAS 248
Query: 246 PAASYITGQVISI 258
             +SY+TG+V+S+
Sbjct: 249 DYSSYMTGEVVSV 261

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 20/258 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G +AL+TG  RGIG A  E   R GA+V     D     +   E     + V   V  
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDVT- 64
Query: 76  LSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS-Y 132
                +++ +   +++  +  G L+ILVNNAAL  +    E T E Y  + + NV  + +
Sbjct: 65  -----RQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLF 119
Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
            L   A   +       I+  +S AG      ++ Y A+K A+  LT++   +     I 
Sbjct: 120 TLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179
Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEY--------VKLIAK-TPLARSAEPNEISPLVAFL 243
           VNA++P  V+ +    D  D L   Y         +L+ +  P  R     +++    FL
Sbjct: 180 VNAIAPGVVDGE--HWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGXAIFL 237
Query: 244 CLPAASYITGQVISIDGG 261
               + YI  Q  ++DGG
Sbjct: 238 ASAESDYIVSQTYNVDGG 255

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 12/228 (5%)
Query: 42  GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILV 101
           GA V  C +D++      QE     F     +CD++  D  + L+      F G+L+ +V
Sbjct: 33  GARVVICDKDESGGRALEQELPGAVF----ILCDVTQEDDVKTLVSETIRRF-GRLDCVV 87
Query: 102 NNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI 160
           NNA      +R  E + + +  ++  N+  +Y L +LA P L+ S   +++ +SS+ GAI
Sbjct: 88  NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI 146
Query: 161 SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK 220
              +   Y A+KGA+  +TK LA + +   +RVN +SP  + T +   +L  L+      
Sbjct: 147 GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLW-EELAALMPDPRAS 205
Query: 221 L---IAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG 265
           +   +   PL R  +P E+     FL    A++ TG  + + GG   G
Sbjct: 206 IREGMLAQPLGRMGQPAEVGAAAVFLA-SEANFCTGIELLVTGGAELG 252

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 13/251 (5%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
           AL+TG   GIG A    LA  G +V   GR +  + E   E    G +      D+S   
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDEL 90
Query: 81  QREKLIETVSSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           Q    +  +   F G L+I+V NA +  V     +    E+   ++ N+  ++    L  
Sbjct: 91  QXRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149
Query: 140 PLLKASGNASIVFMSSVAGA--ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
           P LK  G  +IV +SS+ G    + P  +AY A+K A   + + LA E     IRVNAV 
Sbjct: 150 PYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVC 209
Query: 198 PWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR----SAEPN---EISPLVAFLCLPAASY 250
           P A+ T IS  D   L  +E   +  + P  +      +P    +++ L+ FL    A +
Sbjct: 210 PGAIETNIS--DNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARH 267
Query: 251 ITGQVISIDGG 261
           +TG  + IDGG
Sbjct: 268 VTGSPVWIDGG 278

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 19/259 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVC 74
           ++G  A+VT G+ G+G+A   ELAR GA +    R++    E+++   S+    V+G+  
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNR----EKLEAAASRIASLVSGAQV 60
Query: 75  DLSFGDQRE-----KLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
           D+  GD RE     +L E    +  G  +ILV +       R  E  +E++         
Sbjct: 61  DIVAGDIREPGDIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYRLLAR 118
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S+  + + A   +   G   +V++ SV        L+     +  +  + + LA E A  
Sbjct: 119 SAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPH 178
Query: 190 SIRVNAVSPWAVNTQI------SPPDLNDLLVQEYVKLIA-KTPLARSAEPNEISPLVAF 242
            + VNAV P  + T             + + V+E +K +A + P+ R  +P E++ +VAF
Sbjct: 179 GVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAF 238
Query: 243 LCLPAASYITGQVISIDGG 261
           L    AS+ITG VI +DGG
Sbjct: 239 LASEKASFITGAVIPVDGG 257

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 109/245 (44%), Gaps = 23/245 (9%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD-LSFGD 80
           +VTGG  GIG  I  +    G  V     D+    +  +E     F   G V D L+   
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-RPNLFYFHGDVADPLTLKK 64
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP 140
             E  +E +      ++++LVNNA        +    EE+  ++S  +++ Y L +L   
Sbjct: 65  FVEYAMEKLQ-----RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRD 119
Query: 141 -LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
            L+K  G   I+ ++S     S P   AYA++KG I  LT  LA     D + VN ++P 
Sbjct: 120 ELIKNKGR--IINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPD-VLVNCIAPG 176
Query: 200 AVNTQISPPDLNDLLVQEYVKL-IAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISI 258
            +N             QE+ +   A  P  +   P +IS +V FLC     +ITG+ I +
Sbjct: 177 WINVTEQ---------QEFTQEDCAAIPAGKVGTPKDISNMVLFLC--QQDFITGETIIV 225
Query: 259 DGGYT 263
           DGG +
Sbjct: 226 DGGMS 230

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 22/261 (8%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSV 73
           L+G TALVTG T GIG AI   L   GA+V   GR +  +NE I+E  ++     +   V
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DL      + +IE        K++IL+NN  +       +   E++  +   N+ S   
Sbjct: 68  ADLGTEQGCQDVIEKYP-----KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVR 122
Query: 134 LCQ--LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           L +  L   + +  G   ++F++S A        + Y+A+K     L+++LA      ++
Sbjct: 123 LTRSYLKKXIERKEGR--VIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTNV 180
Query: 192 RVNAVSPWAVNTQISPPDLN------DLLVQEYVKLIAK-----TPLARSAEPNEISPLV 240
            VN + P +  T+     LN       L ++E  K   K     + + R   P EI+ LV
Sbjct: 181 TVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAHLV 240
Query: 241 AFLCLPAASYITGQVISIDGG 261
            FL  P +S I G  + IDGG
Sbjct: 241 TFLSSPLSSAINGSALRIDGG 261

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 15/226 (6%)
Query: 44  SVHTCGRDQNMINERIQEWES---KGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNIL 100
           SV   GR+ + +   +QE E+    G  +     D++  D+  + ++ V++ + G+L+ +
Sbjct: 37  SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA-WHGRLHGV 95
Query: 101 VNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA 159
           V+ A     +   T+   E +   +  NV  + ++ + A   +   G  S V +SS+A +
Sbjct: 96  VHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAAS 155
Query: 160 ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV 219
            +     AY  +K A++ L +  A E     +RVN++ P  + T +         + E  
Sbjct: 156 NTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAA------ITESA 209
Query: 220 KLIAK----TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG 261
           +L +     TPL R  E  +++ +  FL   AAS++TGQVI++DGG
Sbjct: 210 ELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGG 255

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 40/276 (14%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNM---------INERIQEWE 63
           L G  A +TG  RG G A    LA  GA   +V  C +  ++         +   ++  E
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 64  SKGFKVTGSVCDLSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYS 121
             G ++     D+     RE L   + +  D  G+L+I+V NA +  M    +     + 
Sbjct: 71  DIGSRIVARQADVR---DRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDD----GWH 123
Query: 122 SVMSTNVESSYHLCQLAHP-LLKASGNASIVFMSSVAGAISI----PRLSAYAASKGAIN 176
            V+  N+   YH  ++A P L+K     SIV +SS AG   +    P    Y A+K  + 
Sbjct: 124 DVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVV 183
Query: 177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA---KTPLARS--- 230
            L +  A   A   IRVN++ P  V T    P +N+   +E++  +A    TP A     
Sbjct: 184 GLMRVYANLLAGQMIRVNSIHPSGVET----PMINNEFTREWLAKMAAATDTPGAMGNAM 239
Query: 231 ----AEPNEISPLVAFLCLPAASYITGQVISIDGGY 262
                 P +++  VA+L    A YITG  + +D G+
Sbjct: 240 PVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 111/262 (42%), Gaps = 14/262 (5%)
Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKV 69
           D    L G  AL TG  RGIG  I  EL R GAS V   G       E + E +  G + 
Sbjct: 14  DASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQG 73
Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
                D+S   +   L +   S F G L+ +++N+ + V     E T E +  V + N  
Sbjct: 74  VAIQADISKPSEVVALFDKAVSHFGG-LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTR 132
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-IPRLSAYAASKGAINQLTKNLACEWAT 188
             + + Q      +  G   I+  SS+A  ++ IP  + YA SK A+    +  A +   
Sbjct: 133 GQFFVAQQGLKHCRRGGR--IILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGA 190
Query: 189 DSIRVNAVSPWAVNTQI-------SPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPL 239
             + VN ++P  V T +         P     + QE +   L    PL R   P +I   
Sbjct: 191 KGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA 250
Query: 240 VAFLCLPAASYITGQVISIDGG 261
           V+ LC   + +I GQVI + GG
Sbjct: 251 VSALCQEESEWINGQVIKLTGG 272

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 115/255 (45%), Gaps = 16/255 (6%)
Query: 16  LRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L G  ALV G T  R +G+AI  +L   GA V    + + +  E  +  E+ G  +    
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFR- 64
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSVMSTNVE 129
            D++  ++ + L   V   F G L+ LV+  A      +  R  +   +++   +  +  
Sbjct: 65  ADVTQDEELDALFAGVKEAFGG-LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S   + + A PLL+  G   IV ++  A    +P+ +  A +K A+    + LA E    
Sbjct: 124 SLVAVARRAEPLLREGGG--IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPK 181
Query: 190 SIRVNAVSPWAVNT--QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
            +RVNA+S   V T    S P    +    Y ++    PL R+    E+  L  FL  P 
Sbjct: 182 GVRVNAISAGPVRTVAARSIPGFTKM----YDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237
Query: 248 ASYITGQVISIDGGY 262
           AS ITG+V+ +D GY
Sbjct: 238 ASGITGEVVYVDAGY 252

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 107/268 (39%), Gaps = 51/268 (19%)
Query: 23  VTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQR 82
           +TG   GIG A+ E LAR G +V    R Q  I                   DLS    R
Sbjct: 6   ITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------------ADLSTPGGR 48
Query: 83  EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN-VESSYHLCQLAHPL 141
           E  +  V     G L+ LV  A + V       T      V++ N    S  L  LA  L
Sbjct: 49  ETAVAAVLDRCGGVLDGLVCCAGVGV-------TAANSGLVVAVNYFGVSALLDGLAEAL 101
Query: 142 LKASGNASIVFMSSVA---GAISIPRLSA----------------------YAASKGAIN 176
            +    A+++  S  A   GA  +P + A                      YA SK A+ 
Sbjct: 102 SRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVT 161
Query: 177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEI 236
            L +    +WA   +R+N V+P AV T +      D    E  +     PL R +EP E+
Sbjct: 162 CLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFV-APLGRGSEPREV 220
Query: 237 SPLVAFLCLPAASYITGQVISIDGGYTA 264
           +  +AFL  P AS+I G V+ +DGG  A
Sbjct: 221 AEAIAFLLGPQASFIHGSVLFVDGGMDA 248

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 115/255 (45%), Gaps = 16/255 (6%)
Query: 16  LRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L G  ALV G T  R +G+AI  +L   GA V    + + +  E  +  E+ G  +    
Sbjct: 6   LSGKKALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFR- 64
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK----RATEYTLEEYSSVMSTNVE 129
            D++  ++ + L   V   F G L+ LV+  A    +    R  +   +++   +  +  
Sbjct: 65  ADVTQDEELDALFAGVKEAFGG-LDYLVHAIAFAPREAXEGRYIDTRRQDWLLALEVSAY 123
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S   + + A PLL+  G   IV ++  A    +P+ +  A +K A+    + LA E    
Sbjct: 124 SLVAVARRAEPLLREGGG--IVTLTYYASEKVVPKYNVXAIAKAALEASVRYLAYELGPK 181
Query: 190 SIRVNAVSPWAVNT--QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
            +RVNA+S   V T    S P       + Y ++    PL R+    E+  L  FL  P 
Sbjct: 182 GVRVNAISAGPVRTVAARSIPGFT----KXYDRVAQTAPLRRNITQEEVGNLGLFLLSPL 237
Query: 248 ASYITGQVISIDGGY 262
           AS ITG+V+ +D GY
Sbjct: 238 ASGITGEVVYVDAGY 252

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK-- 224
           AYA SK A+    +  A  W    +R+N ++P A  T +    L D     Y + IAK  
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD---PRYGESIAKFV 210
Query: 225 TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
            P+ R AEP+E++ ++AFL  PAASY+ G  I IDGG  A
Sbjct: 211 PPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 4/226 (1%)
Query: 38  LARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVFDGK 96
           L+  GA      R  +++    ++  S+ G KV    CD+   D  +  +  +  V  G 
Sbjct: 46  LSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV-AGH 104
Query: 97  LNILVNNAALVVMKRATEYTLEEYSSVMSTNVE-SSYHLCQLAHPLLKASGNASIVFMSS 155
            NI++NNAA   +      +   + ++    +  +++   ++   L+KA   A+ + +++
Sbjct: 105 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITT 164
Query: 156 VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV 215
           +        +   A++K  +  ++K+LA EW    +R N + P  + T+ +   L+    
Sbjct: 165 IYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT 224
Query: 216 QEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG 261
            E  ++I + P  R     E++ L AFLC   AS+I G VI  DGG
Sbjct: 225 FEK-EMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 18/219 (8%)
Query: 55  INE-RIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT 113
           INE ++QE E K   +   V D++   Q ++    V      +L++L N A  V      
Sbjct: 38  INESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVE-----RLDVLFNVAGFVHHGTVL 91
Query: 114 EYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-IPRLSAYAASK 172
           +   +++   M+ NV S Y + +   P + A  + +I+ MSSVA ++  +     Y+ +K
Sbjct: 92  DCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK 151
Query: 173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV------QEYVKLIAKTP 226
            A+  LTK++A ++    IR N V P  V+T    P L + +       +     + +  
Sbjct: 152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDT----PSLQERIQARGNPEEARNDFLKRQK 207
Query: 227 LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG 265
             R A   EI+ L  +L    ++Y+TG  + IDGG++ G
Sbjct: 208 TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSLG 246

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 5/185 (2%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
           L+TG +RGIG A    L   G  V    RD+  +     E E     + G V +   GD 
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGA-LPLPGDVRE--EGDW 65
Query: 82  REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPL 141
             + +  +   F G+L+ LVNNA + VMK   E TLEE+  V+ TN+  ++   + A P 
Sbjct: 66  -ARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPA 123
Query: 142 LKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAV 201
           L   G  +IV + S+AG       +AY ASK  +  L      +    ++RV  V P +V
Sbjct: 124 LLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSV 183
Query: 202 NTQIS 206
           +T  +
Sbjct: 184 DTGFA 188

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 107/246 (43%), Gaps = 12/246 (4%)
Query: 20  TALVTGGTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           T +V G  R IG A     A+ GA+V  T           + E E  G        DL+ 
Sbjct: 10  TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN 69
Query: 79  GDQREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
             + E  I   +  F G+++ LV+ A  L+  K   E     +  V+  N+ S +   + 
Sbjct: 70  AAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKT 128
Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
           A P + A G A + F S        P   AYA SKGA+   T+ LA E     IRVNAV 
Sbjct: 129 ALPKM-AKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIRVNAVC 186
Query: 198 PWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           P  ++T       +D   +  V+  +   T L R     +++ LVAFL    A+Y+TG  
Sbjct: 187 PGMISTT-----FHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGAC 241
Query: 256 ISIDGG 261
             I+GG
Sbjct: 242 YDINGG 247

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 112/263 (42%), Gaps = 28/263 (10%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE-SKGFKVTGSVC 74
           L G  AL+TGG  G+G A+V+     GA V    +      ER++E E + G    G V 
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSA----ERLRELEVAHGGNAVGVVG 58
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEE-----YSSVMSTNVE 129
           D+     +++  E   + F GK++ L+ NA +     A     E+     +  +   NV+
Sbjct: 59  DVRSLQDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVK 117
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
              H  +   P L +S   S+VF  S AG         Y A+K A+  L + +A E A  
Sbjct: 118 GYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP- 175
Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVK------LIAKTPLARSAEPNEISPLVAFL 243
            +RVN V+P  +NT +  P    L  Q          L +  P+ R     E +    F 
Sbjct: 176 HVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFF 235
Query: 244 C-----LPAASYITGQVISIDGG 261
                 LPA    TG +++ DGG
Sbjct: 236 ATRGDSLPA----TGALLNYDGG 254

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 26/262 (9%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFKVTGSVC 74
           L+G   L+TGG  G+G A+V+     GA V    +      ER+ E E+  G  V G V 
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA----ERLAELETDHGDNVLGIVG 58
Query: 75  DL-SFGDQREKLIETVSSVFDGKLNILVNNAAL----VVMKRATEYTLE-EYSSVMSTNV 128
           D+ S  DQ++     V+    GK++ L+ NA +      +    E +L+  +  V   NV
Sbjct: 59  DVRSLEDQKQAASRCVARF--GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINV 116
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           +   H  +   P L AS   +++F  S AG         Y A+K AI  L + LA E A 
Sbjct: 117 KGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAP 175
Query: 189 DSIRVNAVSPWAVNTQISPPD--------LNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
             +RVN V    +N+ +  P         ++ + + + +K +   P+ R  E  E +   
Sbjct: 176 -YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV--LPIGRMPEVEEYTGAY 232
Query: 241 AFLCLPA-ASYITGQVISIDGG 261
            F      A+  TG +++ DGG
Sbjct: 233 VFFATRGDAAPATGALLNYDGG 254

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
           LVTG + G G AI E     G +V    R    +++ +  +  +   ++  V D   G++
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTD---GER 65
Query: 82  REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPL 141
            + +   V + + G++++LVNNA    +    E T  E   +   +V     L +   P 
Sbjct: 66  IDVVAADVLARY-GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQ 124
Query: 142 LKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAV 201
            +  G+ S+V +SS  G +S    SAY+A+K A+ QL++ LA E A   I+V  V P A 
Sbjct: 125 XRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAF 184
Query: 202 NTQI 205
            T +
Sbjct: 185 RTNL 188

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 25/207 (12%)
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTL-----EEYSSVMSTNV 128
           CD++  +    L++T  +   GKL+I+  N  ++     T Y++     E++  VM  NV
Sbjct: 71  CDVTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVL---STTPYSILEAGNEDFKRVMDINV 126
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS-AYAASKGAINQLTKNLACEWA 187
             ++ + + A  ++  +   SIVF +S++   +   +S  Y A+K A+  LT +L  E  
Sbjct: 127 YGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELG 186
Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLL------VQEYVKLIA--KTPLARSAEPNEISPL 239
              IRVN VSP+ V    + P L D+       V+E     A  K  L R+    +++  
Sbjct: 187 EYGIRVNCVSPYIV----ASPLLTDVFGVDSSRVEELAHQAANLKGTLLRA---EDVADA 239
Query: 240 VAFLCLPAASYITGQVISIDGGYTAGN 266
           VA+L    + Y++G  + IDGGYT  N
Sbjct: 240 VAYLAGDESKYVSGLNLVIDGGYTRTN 266

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 117/248 (47%), Gaps = 20/248 (8%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+    L+TG   G+G    +  A++GA V     D     + + E ++ G +      
Sbjct: 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKV--VVNDFKDATKTVDEIKAAGGEAWPDQH 376
Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++     E +I+ V   + G ++ILVNNA ++  +   + + +E+ SV   ++  +++L
Sbjct: 377 DVA--KDSEAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNL 433
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +LA P         I+ ++S +G       + Y++SK  I  L+K +A E A ++I+VN
Sbjct: 434 SRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVN 493
Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
            V+P A             +++E  K +           ++++PL+ +L       +TG+
Sbjct: 494 IVAPHAETAMTLS------IMREQDKNL--------YHADQVAPLLVYLGTDDVP-VTGE 538
Query: 255 VISIDGGY 262
              I GG+
Sbjct: 539 TFEIGGGW 546

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 12/251 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           + G   +VTG +RGIG  I  +L + GA+V+  GR  + +    QE +S G +    VCD
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVM-------KRATEYTLEEYSSVMSTNV 128
            S   +   L E V     G+L++LVNNA   V        K   E     +  + +  +
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
              Y        L+  +G   IV +SS  G++       Y   K A ++L  + A E   
Sbjct: 123 RGHYFCSVYGARLMVPAGQGLIVVISS-PGSLQYMFNVPYGVGKAACDKLAADCAHELRR 181
Query: 189 DSIRVNAVSPWAVNTQISPPDL-NDLLVQEYVKLIAKTPLARSAEPNEISP--LVAFLCL 245
             +   ++ P  V T++    +  + ++Q+ V    K+  + SAE  E+S   +VA    
Sbjct: 182 HGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFS-SAETTELSGKCVVALATD 240
Query: 246 PAASYITGQVI 256
           P    ++G+V+
Sbjct: 241 PNILSLSGKVL 251

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 33/264 (12%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S++G+ A++TGG  G+G A  E L   GAS         +++      E++  K+ G+ C
Sbjct: 7   SVKGLVAVITGGASGLGLATAERLVGQGASAV-------LLDLPNSGGEAQAKKL-GNNC 58
Query: 75  DLSFGD-QREKLIETVSSVFDGK---LNILVNNAALVV------MKRATEYTLEEYSSVM 124
             +  D   EK ++T  ++  GK   +++ VN A + V      +K+   +TLE++  V+
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 118
Query: 125 STNVESSYHLCQLAHPLL------KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL 178
             N+  ++++ +L    +      +      I+  +SVA        +AY+ASKG I  +
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEIS 237
           T  +A + A   IRV  ++P    T    P L  L  +    L ++ P  +R  +P E +
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGLFGT----PLLTSLPEKVRNFLASQVPFPSRLGDPAEYA 234
Query: 238 PLV-AFLCLPAASYITGQVISIDG 260
            LV A +  P   ++ G+VI +DG
Sbjct: 235 HLVQAIIENP---FLNGEVIRLDG 255

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN-----ERIQEW------ESKGFK 68
           T L+TG + GIG A   E       +     D  +I      E+++E       E    K
Sbjct: 35  TVLITGASAGIGKATALEY------LEASNGDMKLILAARRLEKLEELKKTIDQEFPNAK 88
Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTN 127
           V  +  D++  ++ +  IE +   F   ++ILVNNA   +   R  +   E+   V  TN
Sbjct: 89  VHVAQLDITQAEKIKPFIENLPQEFK-DIDILVNNAGKALGSDRVGQIATEDIQDVFDTN 147
Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           V +  ++ Q   P+ +A  +  IV + S+AG  + P  S Y ASK A+   T +L  E  
Sbjct: 148 VTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELI 207
Query: 188 TDSIRVNAVSPWAVNTQIS 206
              IRV  ++P  V T+ S
Sbjct: 208 NTKIRVILIAPGLVETEFS 226

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Query: 168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL 227
           Y  +K A+  LT++ A E A+  IRVN VSP      + P D+   + ++Y +   K PL
Sbjct: 195 YTMAKEALEGLTRSAALELASLQIRVNGVSP---GLSVLPDDMPFSVQEDYRR---KVPL 248
Query: 228 -ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
             R++   E+S +V FLC P A YITG  I +DGGY+
Sbjct: 249 YQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYS 285

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 33/264 (12%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S++G+ A++TGG  G+G A  E L   GAS         +++      E++  K+ G+ C
Sbjct: 7   SVKGLVAVITGGASGLGLATAERLVGQGASAV-------LLDLPNSGGEAQAKKL-GNNC 58
Query: 75  DLSFGD-QREKLIETVSSVFDGK---LNILVNNAALVV------MKRATEYTLEEYSSVM 124
             +  D   EK ++T  ++  GK   +++ VN A + V      +K+   +TLE++  V+
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 118
Query: 125 STNVESSYHLCQLAHPLL------KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL 178
             N+  ++++ +L    +      +      I+  +SVA        +AY+ASKG I  +
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEIS 237
           T  +A + A   IRV  ++P    T    P L  L  +    L ++ P  +R  +P E +
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGLFGT----PLLTSLPEKVCNFLASQVPFPSRLGDPAEYA 234
Query: 238 PLV-AFLCLPAASYITGQVISIDG 260
            LV A +  P   ++ G+VI +DG
Sbjct: 235 HLVQAIIENP---FLNGEVIRLDG 255

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 33/264 (12%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S++G+ A++TGG  G+G A  E L   GAS         +++      E++  K+ G+ C
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAV-------LLDLPNSGGEAQAKKL-GNNC 60
Query: 75  DLSFGD-QREKLIETVSSVFDGK---LNILVNNAALVV------MKRATEYTLEEYSSVM 124
             +  D   EK ++T  ++  GK   +++ VN A + V      +K+   +TLE++  V+
Sbjct: 61  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 120
Query: 125 STNVESSYHLCQLAHPLL------KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL 178
             N+  ++++ +L    +      +      I+  +SVA        +AY+ASKG I  +
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 180
Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEIS 237
           T  +A + A   IRV  ++P    T    P L  L  +    L ++ P  +R  +P E +
Sbjct: 181 TLPIARDLAPIGIRVMTIAPGLFGT----PLLTSLPEKVCNFLASQVPFPSRLGDPAEYA 236
Query: 238 PLV-AFLCLPAASYITGQVISIDG 260
            LV A +  P   ++ G+VI +DG
Sbjct: 237 HLVQAIIENP---FLNGEVIRLDG 257

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L+G  AL+TG + GIG A    LA  GA+V    R    +     E  + G KV   V 
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKV--HVL 61
Query: 75  DLSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           +L   D R+ +   V+S  +  G L+ILVNNA ++++    +    +++ ++ TN+    
Sbjct: 62  ELDVAD-RQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLM 120
Query: 133 HLCQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           ++ + A P LL++ G  ++V MSS+AG +++   + Y A+K  +N  ++ L  E     +
Sbjct: 121 YMTRAALPHLLRSKG--TVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178
Query: 192 RVNAVSPWAVNTQI 205
           RV  + P   +T++
Sbjct: 179 RVVVIEPGTTDTEL 192

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 4/249 (1%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSV 73
           S +G  A +TGG  G+G      L+  GA      R  +++    ++  S+ G KV    
Sbjct: 23  SFQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNKVHAIQ 82
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE-SSY 132
           CD+   D  +  +  +  V  G  NI++NNAA   +      +   + ++    +  +++
Sbjct: 83  CDVRDPDXVQNTVSELIKV-AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 141
Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
              ++   L+KA   A+ + ++++        +   A++K  +   +K+LA EW     R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXR 201
Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            N + P  + T+ +   L+     E  + I + P  R     E++ L AFLC   AS+I 
Sbjct: 202 FNVIQPGPIKTKGAFSRLDPTGTFEK-EXIGRIPCGRLGTVEELANLAAFLCSDYASWIN 260
Query: 253 GQVISIDGG 261
           G VI  DGG
Sbjct: 261 GAVIKFDGG 269

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  I   LA+ GA V    R     Q ++   ++   +    + G
Sbjct: 7   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 66
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEY--TLEEYSSVMSTNVE 129
           S+ D++F    E+ +    ++  G L++L+ N   V+  R T +   ++     M  N  
Sbjct: 67  SMEDMTFA---EEFVAEAGNLMGG-LDMLILNH--VLYNRLTFFHGEIDNVRKSMEVNFH 120
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S   L   A P+L  S   SI  +SSVAG I+ P ++ Y+ASK A++     L  E+  +
Sbjct: 121 SFVVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVN 179
Query: 190 SIRVN 194
            + V+
Sbjct: 180 KVNVS 184

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 22  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 82  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 137
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 138 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 196
Query: 192 RVN 194
            V+
Sbjct: 197 NVS 199

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  I   LA+ GA V    R     Q ++   ++   +    + G
Sbjct: 30  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 89
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEY--TLEEYSSVMSTNVE 129
           S+ D++F    E+ +    ++  G L++L+ N   V+  R T +   ++     M  N  
Sbjct: 90  SMEDMTFA---EEFVAEAGNLMGG-LDMLILNH--VLYNRLTFFHGEIDNVRKSMEVNFH 143
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S   L   A P+L  S   SI  +SSVAG I+ P ++ Y+ASK A++     L  E+  +
Sbjct: 144 SFVVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVN 202
Query: 190 SIRVN 194
            + V+
Sbjct: 203 KVNVS 207

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 72  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 127
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 128 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 186
Query: 192 RVN 194
            V+
Sbjct: 187 NVS 189

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 13  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 73  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 128
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 129 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 187
Query: 192 RVN 194
            V+
Sbjct: 188 NVS 190

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 86  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 141
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 142 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 200
Query: 192 RVN 194
            V+
Sbjct: 201 NVS 203

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  I   LA+ GA V    R     Q ++   ++   +    + G
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEY--TLEEYSSVMSTNVE 129
           S+ D++F    E+ +    ++  G L++L+ N   V+  R T +   ++     M  N  
Sbjct: 69  SMEDMTFA---EEFVAEAGNLMGG-LDMLILNH--VLYNRLTFFHGEIDNVRKSMEVNFH 122
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S   L   A P+L  S   SI  +SSVAG I+ P ++ Y+ASK A++     L  E+  +
Sbjct: 123 SFVVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVN 181
Query: 190 SIRVN 194
            + V+
Sbjct: 182 KVNVS 186

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  I   LA+ GA V    R     Q ++   ++   +    + G
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEY--TLEEYSSVMSTNVE 129
           S+ D++F    E+ +    ++  G L++L+ N   V+  R T +   ++     M  N  
Sbjct: 69  SMEDMTFA---EEFVAEAGNLMGG-LDMLILNH--VLYNRLTFFHGEIDNVRKSMEVNFH 122
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S   L   A P+L  S   SI  +SSVAG I+ P ++ Y+ASK A++     L  E+  +
Sbjct: 123 SFVVLSVAAMPMLMQS-QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVN 181
Query: 190 SIRVN 194
            + V+
Sbjct: 182 KVNVS 186

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 67  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 122
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 123 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 181
Query: 192 RVN 194
            V+
Sbjct: 182 NVS 184

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 15  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 75  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 130
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 131 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 189
Query: 192 RVN 194
            V+
Sbjct: 190 NVS 192

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 27/243 (11%)
Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASV--------HTC-GRDQNMINERIQE 61
           D K    G  A+VTG   G+G       A  GA V        H+  G  Q   +  + E
Sbjct: 12  DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDE 71
Query: 62  WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS 121
               G +   +V D +      K+IET    F G+++ILVNNA ++  +   + + ++++
Sbjct: 72  IRKAGGE---AVADYNSVIDGAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWN 127
Query: 122 SVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN 181
            V   +++ S+   Q A P +K      I+  SS +G         Y A+K  +  L   
Sbjct: 128 LVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANT 187
Query: 182 LACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA 241
           +A E A +++  N + P A  ++++   L D+L  E              +P  I+P+VA
Sbjct: 188 VAIEGARNNVLCNVIVPTAA-SRMTEGILPDILFNEL-------------KPKLIAPVVA 233
Query: 242 FLC 244
           +LC
Sbjct: 234 YLC 236

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 29  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 89  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 144
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 145 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 203
Query: 192 RVN 194
            V+
Sbjct: 204 NVS 206

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 92  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 147
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 148 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRV 206
Query: 192 RVN 194
            V+
Sbjct: 207 NVS 209

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 92  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 147
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 148 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRV 206
Query: 192 RVN 194
            V+
Sbjct: 207 NVS 209

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 72  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 127
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 128 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRV 186
Query: 192 RVN 194
            V+
Sbjct: 187 NVS 189

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 13/254 (5%)
Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L G  AL+TG    R I Y I +   R GA +        +  +R++E  +KGF     V
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKL-EKRVREI-AKGFGSDLVV 76
Query: 74  -CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKR----ATEYTLEEYSSVMSTNV 128
            CD+S  +  + L + +   + G L+I+V++ A    +       + + E +   M  +V
Sbjct: 77  KCDVSLDEDIKNLKKFLEENW-GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISV 135
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            S   L +   PL++   N +IV +S       +P  +    +K A+    + LA + A 
Sbjct: 136 YSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAK 194
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
              R+NA+S   V T  +       L+ E+   +   P  +     ++     FLC   A
Sbjct: 195 HGHRINAISAGPVKTLAAYSITGFHLLMEHTTKV--NPFGKPITIEDVGDTAVFLCSDWA 252
Query: 249 SYITGQVISIDGGY 262
             ITG+V+ +D GY
Sbjct: 253 RAITGEVVHVDNGY 266

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   LA+ GA V    R     Q +++  ++   +    + G
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++ D++F +Q    +     +  G L++L+ N             +      M  N  S 
Sbjct: 86  TMEDMTFAEQ---FVAQAGKLMGG-LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSY 141
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L   A P+LK S N SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   +
Sbjct: 142 VVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 200
Query: 192 RVN 194
            V+
Sbjct: 201 NVS 203

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 6/184 (3%)
Query: 84  KLIETVSSVFDGKLNILV-NNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLL 142
           +LIE V+S   G ++ILV N+ A V  +   +Y +E+Y  ++       + L       +
Sbjct: 61  ELIEAVTSAL-GHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEALQIKPFALANAVASQM 119
Query: 143 KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVN 202
           K   +  I+F++S A       LS YA+++   + L   L+ E    +I V A++P  V+
Sbjct: 120 KRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNIPVFAIAPNGVD 179
Query: 203 TQISP---PDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAASYITGQVISI 258
           +  SP   P        E+V  + K T L R     E+  LV FL   +  Y+TGQV  +
Sbjct: 180 SGDSPYYYPSEPWKTSPEHVAWVRKYTALQRLGTQKELGELVTFLASGSCDYLTGQVFWL 239
Query: 259 DGGY 262
            GG+
Sbjct: 240 AGGF 243

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 115/265 (43%), Gaps = 32/265 (12%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASV-----HTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           A++TGG R IG++I   L + G  V     H+ G  Q ++ E             G +  
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73
Query: 76  LSFG-DQREKLIETVSSVFDGKLNILVNNAAL-----VVMKRATEYTLE------EYSSV 123
            S   D  E +I+     F G+ ++LVNNA+      ++    T    +      + + +
Sbjct: 74  SSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 132
Query: 124 MSTNVESSYHLCQLAHPLLKASG------NASIVFMSSVAGAISIPRLSAYAASKGAINQ 177
             +N  +   L + A    +  G      N S+V +      + +P    Y  +K A+  
Sbjct: 133 FGSNAVAPLFLIR-AFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 191
Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARS-AEPNEI 236
           LT+  A E A   IRVNAV+P      + PP +     +EY +   K PL +S A   +I
Sbjct: 192 LTRAAALELAPRHIRVNAVAP---GLSLLPPAMPQETQEEYRR---KVPLGQSEASAAQI 245
Query: 237 SPLVAFLCLPAASYITGQVISIDGG 261
           +  +AFL    A YITG  + +DGG
Sbjct: 246 ADAIAFLVSKDAGYITGTTLKVDGG 270

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 7/187 (3%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
           L+TG + GIG  I  EL   GA +    R Q  I     E    G      V D++    
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT---D 64
Query: 82  REKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           R  +     +  D  G++++LVNNA ++ +       ++E+  ++  N++          
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVL 124
Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P+++A  +  I+ + S+     +P  + Y A+K A+  ++  L  E  + +IRV  V+P 
Sbjct: 125 PIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPG 182
Query: 200 AVNTQIS 206
            V ++++
Sbjct: 183 VVESELA 189

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 114/265 (43%), Gaps = 32/265 (12%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASV-----HTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           A++TGG R IG++I   L + G  V     H+ G  Q ++ E             G +  
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73
Query: 76  LSFG-DQREKLIETVSSVFDGKLNILVNNAAL-----VVMKRATEYTLE------EYSSV 123
            S   D  E +I+     F G+ ++LVNNA+      ++    T    +      + + +
Sbjct: 74  SSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 132
Query: 124 MSTNVESSYHLCQLAHPLLKASG------NASIVFMSSVAGAISIPRLSAYAASKGAINQ 177
             +N  +   L + A    +  G      N S+V +      + +P    Y  +K A+  
Sbjct: 133 FGSNAVAPLFLIR-AFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKHALGG 191
Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARS-AEPNEI 236
           LT+  A E A   IRVNAV+P      + PP       +EY +   K PL +S A   +I
Sbjct: 192 LTRAAALELAPRHIRVNAVAP---GLSLLPPAXPQETQEEYRR---KVPLGQSEASAAQI 245
Query: 237 SPLVAFLCLPAASYITGQVISIDGG 261
           +  +AFL    A YITG  + +DGG
Sbjct: 246 ADAIAFLVSKDAGYITGTTLKVDGG 270

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 29/262 (11%)
Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHT----CGRDQN------MINERIQEWESKGF 67
           G   +VTG   GIG A     A  GA V       G D +           + E  + G 
Sbjct: 27  GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG 86
Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
           +      +++  DQ   LI+T    F G L++LVNNA +V  +     + EE+ +V++ +
Sbjct: 87  EAVADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVH 145
Query: 128 VESSYHLCQLAHPL-----LKASGNA---SIVFMSSVAGAISIPRLSAYAASKGAINQLT 179
           ++   H   + H       L  +G A    I+  SS AG         Y+A+K  I  LT
Sbjct: 146 LKG--HFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLT 203
Query: 180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL 239
              A E     + VNA++P A  T+++     +++  +     A  P         +SPL
Sbjct: 204 LVGAAEMGRYGVTVNAIAPSA-RTRMTETVFAEMMATQDQDFDAMAP-------ENVSPL 255
Query: 240 VAFLCLPAASYITGQVISIDGG 261
           V +L    A  +TG+V  ++GG
Sbjct: 256 VVWLGSAEARDVTGKVFEVEGG 277

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEE-YSSVMSTNVESSYHLCQLAH 139
           Q  +L   V   F G+L+ L++NA+++  +   E   +E +  V   NV +++ L +   
Sbjct: 80  QYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATFXLTRALL 138
Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW-ATDSIRVNAVSP 198
           PLLK S +ASI F SS  G        AY  SK A   L + LA E     ++R N+++P
Sbjct: 139 PLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLXQTLADELEGVTAVRANSINP 198
Query: 199 WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
            A  T            Q Y     + PL   A P +I P+  +L  P ++ I GQ ++
Sbjct: 199 GATRTGXR--------AQAYPD---ENPLNNPA-PEDIXPVYLYLXGPDSTGINGQALN 245

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 111/262 (42%), Gaps = 24/262 (9%)
Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASV---HTCGRDQNMINERIQEWESKGFK 68
           K   L+    ++ GG + +G    +  A    ++   +   +D +  N+   E E +G K
Sbjct: 5   KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAK 64
Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
           V     DLS  ++  KL +     F GK++I +N    V+ K   E +  E+ ++ + N 
Sbjct: 65  VALYQSDLSNEEEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINN 123
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           + +Y   + A   +  +G+   +  S +A        S YA +K  +   T+  + E   
Sbjct: 124 KVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF--YSTYAGNKAPVEHYTRAASKELMK 181
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARS-------AEPNEISPLVA 241
             I VNA++P        P D +    QE  +    T   +S        +  +I+P++ 
Sbjct: 182 QQISVNAIAP-------GPMDTSFFYGQETKE---STAFHKSQAMGNQLTKIEDIAPIIK 231
Query: 242 FLCLPAASYITGQVISIDGGYT 263
           FL      +I GQ I  +GGYT
Sbjct: 232 FLTTDGW-WINGQTIFANGGYT 252

>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) In Complex With Nad+ And Triclosan Length = 280

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 13/260 (5%)
Query: 10  GDKKWSLRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF 67
           G     L G   L+TG    + I Y I + + R GA +      Q    +R+++  ++  
Sbjct: 18  GSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN 75
Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATE-----YTLEEYSS 122
                 CD+    + + L   +  V+DG L+ +V++ A     +         T E +S 
Sbjct: 76  PAAVLPCDVISDQEIKDLFVELGKVWDG-LDAIVHSIAFAPRDQLEGNFIDCVTREGFSI 134
Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
               +  S   L +    ++K + NAS+V ++ +    ++P  +    +K ++    +  
Sbjct: 135 AHDISAYSFAALAKEGRSMMK-NRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYT 193
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           A     D I+VNAVS   + T  +    N   + +Y  ++  +PL ++ +  E+   VAF
Sbjct: 194 ALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMV--SPLKKNVDIMEVGNTVAF 251
Query: 243 LCLPAASYITGQVISIDGGY 262
           LC   A+ ITG+V+ +D GY
Sbjct: 252 LCSDMATGITGEVVHVDAGY 271

>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl Reductase (Ftfabi) With Bound Nad Length = 268

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 13/254 (5%)
Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L G   L+TG    + I Y I + + R GA +      Q    +R+++  ++        
Sbjct: 4   LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLP 61
Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATE-----YTLEEYSSVMSTNV 128
           CD+    + + L   +  V+DG L+ +V++ A     +         T E +S     + 
Sbjct: 62  CDVISDQEIKDLFVELGKVWDG-LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISA 120
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            S   L +    ++K + NAS+V ++ +    ++P  +    +K ++    +  A     
Sbjct: 121 YSFAALAKEGRSMMK-NRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGE 179
Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           D I+VNAVS   + T  +    N   + +Y  ++  +PL ++ +  E+   VAFLC   A
Sbjct: 180 DGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMV--SPLKKNVDIMEVGNTVAFLCSDMA 237
Query: 249 SYITGQVISIDGGY 262
           + ITG+V+ +D GY
Sbjct: 238 TGITGEVVHVDAGY 251

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 4/189 (2%)
Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           T  +TG T G G A     A  G S+   GR +  +     E  +K  +V     D+   
Sbjct: 23  TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDR 81
Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
                 ++ +   F   L  L+NNA L +    A    L+++ + + TN++   +  +L 
Sbjct: 82  AAXSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLL 140
Query: 139 HPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
            P L A G  ASIV + SVAG    P    Y  +K  + Q + NL C+     +RV  + 
Sbjct: 141 LPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLE 200
Query: 198 PWAVNTQIS 206
           P    ++ S
Sbjct: 201 PGLCESEFS 209

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 116/274 (42%), Gaps = 36/274 (13%)
Query: 18  GMTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNM------------INERIQEW 62
           G  A ++G  RG G +    LA+ GA   ++  CG  +N+              + +++ 
Sbjct: 15  GKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVKDL 74
Query: 63  ESKGFKVTGSVCDLSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEE- 119
           + +   VT  V    F    E L   V S  +  G+L+I+V NA +    R      +  
Sbjct: 75  DRR--IVTAQVDVRDF----EALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNV 128
Query: 120 YSSVMSTNVESSYHLCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQL 178
           +  ++  N+   +H  +   P + + G   SIV  SSV G  + P    Y A+K  +  L
Sbjct: 129 WQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGL 188
Query: 179 TKNLACEWATDSIRVNAVSPWAVNT---------QISPPDLNDLLVQEYVKL--IAKTPL 227
            +  A E     IRVNAV P  V+T         ++  PDL +    ++  +  +  T  
Sbjct: 189 MRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLP 248
Query: 228 ARSAEPNEISPLVAFLCLPAASYITGQVISIDGG 261
               + ++IS  V FL    + Y+TG  + +D G
Sbjct: 249 VPWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 46/255 (18%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   L++ GA V    R     Q +++  ++   +    + G
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 66
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS-------VM 124
           ++ D++F +Q           F  K   L+    ++++   T+ +L  +         VM
Sbjct: 67  TMEDMTFAEQ-----------FIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVM 115
Query: 125 STNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLAC 184
             N  S   +   A P+LK S N SI  +SS+AG ++ P ++ Y+ASK A++     +  
Sbjct: 116 EVNFLSYVVMSTAALPMLKQS-NGSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRT 174
Query: 185 EWATDSIRVN----------------AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA 228
           E     + V+                AVS   VN Q SP +      +  +++I  T L 
Sbjct: 175 ELYITKVNVSITLCVLGLIDTETAMKAVS-GIVNAQASPKE------ECALEIIKGTALR 227
Query: 229 RSAEPNEISPLVAFL 243
           +S    + SPL   L
Sbjct: 228 KSEVYYDKSPLTPIL 242

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 28/262 (10%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR--DQNMINERIQEWESKGFKVTGS 72
           +LRG  AL+T GT+G G A V      GA V T  R   + +  E   E +      T  
Sbjct: 8   NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEAD----LTTKE 63
Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTL--EEYSSVMSTNVES 130
            C +     R++L         G ++++V+              L  +++ + +S N+ +
Sbjct: 64  GCAIVAEATRQRL---------GGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLNLFA 114
Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR-LSAYAASKGAINQLTKNLACEWATD 189
           +  L +   P   A G+  +V ++S+   + +P   +AYAA+K A++  +K  + E +  
Sbjct: 115 AVRLDRQLVPDXVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAXSKEVSPK 174
Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKL----------IAKTPLARSAEPNEISPL 239
            +RV  VSP  + T+ S      L  Q    L          +   PL R A+P E++ L
Sbjct: 175 GVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPLGRPAKPEEVANL 234
Query: 240 VAFLCLPAASYITGQVISIDGG 261
           +AFL    A+ ITG   +IDGG
Sbjct: 235 IAFLASDRAASITGAEYTIDGG 256

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 113/279 (40%), Gaps = 38/279 (13%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQ-NMINERIQEWESKGFKVTG 71
           + G  A VTG  RG G +    LA+ GA   +V  C   +  +++  I     +    T 
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET- 67
Query: 72  SVCDLSFGDQREKLIETVSSVFD---------------GKLNILVNNAALVVMKRATEYT 116
              DL  G  R +++     V D               G+L+I+V NA +       + T
Sbjct: 68  --ADLVKGHNR-RIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKT 124
Query: 117 LEE-YSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGA 174
            EE ++ ++  N+   +   +   P + A G   SI+  SSV G  + P    Y A+K  
Sbjct: 125 SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHG 184
Query: 175 INQLTKNLACEWATDSIRVNAVSPWAVNT---------QISPPDLNDLLVQEYV---KLI 222
           +  L +    E     IRVN+V P  V T         ++  PDL +    +     ++ 
Sbjct: 185 VVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF 244
Query: 223 AKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG 261
              P+    EP +IS  V F     A YITG  + ID G
Sbjct: 245 HTLPIPW-VEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 33/239 (13%)
Query: 18  GMTALVTGGTRGIGYAIVEELARFGASV---------HTCGRDQNMINERIQEWESKGFK 68
           G   LVTG   G+G A     A  GA V            G+     ++ ++E   +G K
Sbjct: 30  GRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGK 89
Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
              +V +    ++ EK+++T    F G+++++VNNA ++  +     + E++  +   ++
Sbjct: 90  ---AVANYDSVEEGEKVVKTALDAF-GRIDVVVNNAGILRDRSFARISDEDWDIIHRVHL 145
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
             S+ + + A   +K      I+  SS +G       + Y+A+K  +  L  +LA E   
Sbjct: 146 RGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRK 205
Query: 189 DSIRVNAVSPWA---VNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
            +I  N ++P A   +   + P DL + L  EYV                 +PLV +LC
Sbjct: 206 SNIHCNTIAPNAGSRMTQTVMPEDLVEALKPEYV-----------------APLVLWLC 247

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD--------QNMINERIQEWESKGF 67
           L+    LVTG + GIG       AR+GA+V   GR+        Q++ +E  Q  + + F
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADE--QHVQPQWF 69
Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
            +    C      Q    I       DG   +L N   L  +   +E   + +  VM  N
Sbjct: 70  TLDLLTCTAEECRQVADRIAAHYPRLDG---VLHNAGLLGEIGPMSEQDPQIWQDVMQVN 126
Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           V +++ L Q   PLL  S   S+VF SS  G        AYA SK A   + + LA E+ 
Sbjct: 127 VNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQ 186
Query: 188 TDSIRVNAVSPWAVNTQI 205
             S+RVN ++P    T +
Sbjct: 187 NRSLRVNCINPGGTRTSM 204

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLS 77
           M  LVTG T G G  I     + G  V   GR Q    ER+QE + + G  +  +  D+ 
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVR 56
Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQ 136
                E+++ ++ + +   ++ILVNNA L + M+ A + ++E++ +++ TN +   ++ +
Sbjct: 57  NRAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115
Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
              P +    +  I+ + S AG+      + Y A+K  + Q + NL  +    ++RV  +
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175
Query: 197 SP 198
            P
Sbjct: 176 EP 177

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 33/239 (13%)
Query: 18  GMTALVTGGTRGIGYAIVEELARFGASV---------HTCGRDQNMINERIQEWESKGFK 68
           G   LVTG   G+G A     A  GA V            G+  +  ++ ++E   +G K
Sbjct: 9   GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK 68
Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
              +   +  G   EKL++T    F G+++++VNNA ++  +  +  + E++  +   ++
Sbjct: 69  AVANYDSVEAG---EKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHL 124
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
             S+ + + A    K      I+  +S +G       + Y+A+K  +  L   L  E   
Sbjct: 125 RGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRK 184
Query: 189 DSIRVNAVSPWA---VNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
           ++I  N ++P A       + P DL + L  EYV                 +PLV +LC
Sbjct: 185 NNIHCNTIAPNAGSRXTETVXPEDLVEALKPEYV-----------------APLVLWLC 226

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 8/194 (4%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L+G  AL+TG + GIG A    LA  GA+V    R    +     E  + G KV   V 
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKV--HVL 61
Query: 75  DLSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           +L   D R+ +   V+S  +  G L+ILVNNA + ++    +    +++  + TN+    
Sbjct: 62  ELDVAD-RQGVDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLX 120
Query: 133 HLCQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           +  + A P LL++ G  ++V  SS+AG +++   + Y A+K  +N  ++ L  E     +
Sbjct: 121 YXTRAALPHLLRSKG--TVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178
Query: 192 RVNAVSPWAVNTQI 205
           RV  + P   +T++
Sbjct: 179 RVVVIEPGTTDTEL 192

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 29/262 (11%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S++G+ A++TGG  G+G +  + L   GA+         +++    E E++  K+ G+  
Sbjct: 6   SVKGLVAVITGGASGLGLSTAKRLVGQGATAV-------LLDVPNSEGETEAKKLGGNCI 58
Query: 75  DLSFGDQREKLIE---TVSSVFDGKLNILVNNAALVVM------KRATEYTLEEYSSVMS 125
                   EK ++   T++    G++++ VN A + V       K+   +TLE++  V++
Sbjct: 59  FAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVIN 118
Query: 126 TNVESSYHLCQLAHPLL------KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT 179
            N+  ++++ +L   ++      +      I+  +SVA        +AY+ASKG I  +T
Sbjct: 119 VNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMT 178
Query: 180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISP 238
             +A + A   IRV  ++P    T    P L  L  +    L ++ P  +R  +P E + 
Sbjct: 179 LPIARDLAPIGIRVVTIAPGLFAT----PLLTTLPDKVRNFLASQVPFPSRLGDPAEYAH 234
Query: 239 LVAFLCLPAASYITGQVISIDG 260
           LV  +      ++ G+VI +DG
Sbjct: 235 LVQMVI--ENPFLNGEVIRLDG 254

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 29/262 (11%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S++G+ A++TGG  G+G +  + L   GA+         +++    E E++  K+ G+  
Sbjct: 7   SVKGLVAVITGGASGLGLSTAKRLVGQGATAV-------LLDVPNSEGETEAKKLGGNCI 59
Query: 75  DLSFGDQREKLIE---TVSSVFDGKLNILVNNAALVVM------KRATEYTLEEYSSVMS 125
                   EK ++   T++    G++++ VN A + V       K+   +TLE++  V++
Sbjct: 60  FAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVIN 119
Query: 126 TNVESSYHLCQLAHPLL------KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT 179
            N+  ++++ +L   ++      +      I+  +SVA        +AY+ASKG I  +T
Sbjct: 120 VNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMT 179
Query: 180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISP 238
             +A + A   IRV  ++P    T    P L  L  +    L ++ P  +R  +P E + 
Sbjct: 180 LPIARDLAPIGIRVVTIAPGLFAT----PLLTTLPDKVRNFLASQVPFPSRLGDPAEYAH 235
Query: 239 LVAFLCLPAASYITGQVISIDG 260
           LV  +      ++ G+VI +DG
Sbjct: 236 LVQMVI--ENPFLNGEVIRLDG 255

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 23/190 (12%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWESKGFKVTG 71
           L+G   +VTG ++GIG  +   L++ GA V    R     Q +++  ++   +    + G
Sbjct: 16  LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 75
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS-------VM 124
           ++ D++F +Q           F  K   L+    ++++   T+ +L  +         VM
Sbjct: 76  TMEDMTFAEQ-----------FIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVM 124
Query: 125 STNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLAC 184
             N  S   +   A P+LK S N SI  +SS+AG ++ P ++ Y+ASK A++     +  
Sbjct: 125 EVNFLSYVVMSTAALPMLKQS-NGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRT 183
Query: 185 EWATDSIRVN 194
           E     + V+
Sbjct: 184 ELYITKVNVS 193

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 127/264 (48%), Gaps = 33/264 (12%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S++G+ A++TGG  G+G +  + L   GA+         +++    E E++  K+ G+  
Sbjct: 7   SVKGLVAVITGGASGLGLSTAKRLVGQGATAV-------LLDVPNSEGETEAKKLGGNCI 59
Query: 75  DLSFGDQREKLIE---TVSSVFDGKLNILVNNAALVVM------KRATEYTLEEYSSVMS 125
                   EK ++   T++    G++++ VN A + V       K+   +TLE++  V++
Sbjct: 60  FAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVIN 119
Query: 126 TNVESSYHLCQLAHPLL------KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLT 179
            N+  ++++ +L   ++      +      I+  +SVA        +AY+ASKG I  +T
Sbjct: 120 VNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMT 179
Query: 180 KNLACEWATDSIRVNAVSPWAVNTQI--SPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEI 236
             +A + A   IRV  ++P    T +  + PD     V+ +  L ++ P  +R  +P E 
Sbjct: 180 LPIARDLAPIGIRVVTIAPGLFATPLLTTLPD----TVRNF--LASQVPFPSRLGDPAEY 233
Query: 237 SPLVAFLCLPAASYITGQVISIDG 260
           + LV  +      ++ G+VI +DG
Sbjct: 234 AHLVQMVI--ENPFLNGEVIRLDG 255

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 121 SSVMSTNVESSYHLCQ-LAH-----PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA 174
           + +  +N  + Y L +  AH     P  +   N SIV M     +  +   + Y  +KGA
Sbjct: 141 ADLFGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNMVDAMTSQPLLGYTIYTMAKGA 200
Query: 175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEP 233
           +  LT++ A E A   IRVN V P      +   D+   + ++Y    +K PL  R +  
Sbjct: 201 LEGLTRSAALELAPLQIRVNGVGP---GLSVLADDMPPAVREDYR---SKVPLYQRDSSA 254
Query: 234 NEISPLVAFLCLPAASYITGQVISIDGGYT 263
            E+S +V FLC   A Y+TG  + +DGGY+
Sbjct: 255 AEVSDVVIFLCSSKAKYVTGTCVKVDGGYS 284

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 20/251 (7%)
Query: 18  GMTALVTGGTRGIGYAIVEELARFGAS--VHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           G   LVTG +RGIG +IV+ L        V+   R +  + +  +++  + F V G + +
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE 61
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHL 134
               D   K +   +    GK++ LV NA ++  ++   E  +  +  +   N  S   L
Sbjct: 62  ----DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117
Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
             +A P LK + N ++VF+SS A  +      AY +SK A+N     LA E     ++  
Sbjct: 118 VGIALPELKKT-NGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAI 174
Query: 195 AVSPWAVNTQ--------ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
           AV+P  V+T         + P  ++   ++ +  L     L  S+ P  +   +A   +P
Sbjct: 175 AVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP 234
Query: 247 AASYITGQVIS 257
               + GQ +S
Sbjct: 235 DG--VNGQYLS 243

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           ++ S+ G   L+TG   GIG     E A+  + +     +++ + E   + +  G KV  
Sbjct: 25  RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHT 84
Query: 72  SVCDLSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
            V D S    RE +  +   V    G ++ILVNNA +V       YT + +++     +E
Sbjct: 85  FVVDCS---NREDIYSSAKKVKAEIGDVSILVNNAGVV-------YTSDLFAT-QDPQIE 133
Query: 130 SSYHLCQLAH--------PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN 181
            ++ +  LAH        P +  + +  IV ++S AG +S+P L AY +SK A     K 
Sbjct: 134 KTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKT 193
Query: 182 LACEWAT---DSIRVNAVSPWAVNT 203
           L  E A      ++   + P  VNT
Sbjct: 194 LTDELAALQITGVKTTCLCPNFVNT 218

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-------QNMINERIQEW 62
           G    SLRG T  ++GG+RGIG AI + +A  GA+V    +           I    +E 
Sbjct: 1   GPGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEI 60
Query: 63  ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS 122
           E  G +    V D+  GD     +      F G ++I VNNA+ + +    E  L+ +  
Sbjct: 61  EEAGGQALPIVGDIRDGDAVAAAVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDL 119
Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMS 154
           +    V  +Y + Q   P +K   N  I+ +S
Sbjct: 120 MNGIQVRGTYAVSQSCIPHMKGRDNPHILTLS 151

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC---DLSF 78
           ++TG + GIG AI    +  G  +    R       R++    K   +  ++C   D++ 
Sbjct: 20  VITGASSGIGEAIARRFSEEGHPLLLLAR-------RVERL--KALNLPNTLCAQVDVTD 70
Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
               +  I     ++ G  + +VNNA ++++ +       E+  +   NV    +  Q  
Sbjct: 71  KYTFDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAV 129
Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
              +KA    +I+ +SS+AG  + P  +AY  +K A++ +++N+  E A  ++RV  ++P
Sbjct: 130 LAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAP 189
Query: 199 WAVNTQI 205
            AV T++
Sbjct: 190 SAVKTEL 196

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 59  IQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTL- 117
           I E    G +V     DL+     +  ++ V + F G+++ LVNNA +  + R     L 
Sbjct: 71  IAELSGLGARVIFLRADLADLSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLK 129
Query: 118 -EEYSSVMSTNVESSYHLCQLAHPLLKAS---GNASIVFMSSVAGAISIPRLSAYAASKG 173
            E + +++  N+  +    Q       AS    + SI+ ++SV+   + P    Y  SK 
Sbjct: 130 PENFDTIVGVNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKA 189
Query: 174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK--TPLARSA 231
            +   ++ LA   A   I V  V P  + +     D    +  +Y  LI     P  R  
Sbjct: 190 GLAAFSQGLALRLAETGIAVFEVRPGIIRS-----DXTAAVSGKYDGLIESGLVPXRRWG 244
Query: 232 EPNEISPLVAFLCLPAASYITGQVISIDGGYTAGN 266
           EP +I  +VA L      + TG VI  DGG + G 
Sbjct: 245 EPEDIGNIVAGLAGGQFGFATGSVIQADGGLSIGR 279

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 23/220 (10%)
Query: 22  LVTGGTRGIGYAIVEELAR-------FGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           L+TG  +GIG AI  E AR       F   +    R    + +   E  ++G        
Sbjct: 6   LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITA 65
Query: 75  DLS-FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           D+S   D R      V     G ++ LVNNA +      ++ T E++   M+TN++ ++ 
Sbjct: 66  DISDMADVRRLTTHIVERY--GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L Q    L++   +  I F++SVA   +    S Y  SK     L + +       ++R+
Sbjct: 124 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 183
Query: 194 NAVSPWAVNT-------------QISPPDLNDLLVQEYVK 220
             V P AV T              + P D+   +VQ Y++
Sbjct: 184 TDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQ 223

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV 69
           G ++W  R   ALVTG + GIG A+   L + G  V  C R    I E   E +S G+  
Sbjct: 26  GMERW--RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPG 83
Query: 70  T--GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
           T     CDLS  +    +   + S   G ++I +NNA L         +   +  + + N
Sbjct: 84  TLIPYRCDLSNEEDILSMFSAIRSQHSG-VDICINNAGLARPDTLLSGSTSGWKDMFNVN 142
Query: 128 VESSYHLCQLAHPLLKASG--NASIVFMSSVAGAISIPRLSA---YAASKGAINQLTKNL 182
           V +     + A+  +K     +  I+ ++S++G   +P LS    Y+A+K A+  LT+ L
Sbjct: 143 VLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP-LSVTHFYSATKYAVTALTEGL 201
Query: 183 ACEW--ATDSIRVNAVSPWAVNTQIS 206
             E   A   IR   +SP  V TQ +
Sbjct: 202 RQELREAQTHIRATCISPGVVETQFA 227

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 6/186 (3%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGSVCDL--SF 78
           LVTG + GIG       AR+GA+V   GR++  + +      E  G +    + DL    
Sbjct: 16  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 75
Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
            +  ++L + ++  +  +L+ +++NA L+  +   +E   + +  VM  NV +++ L Q 
Sbjct: 76  SENCQQLAQRIAVNYP-RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQA 134
Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
             PLL  S   S+VF SS  G        AYAASK A   + + LA E+    +RVN ++
Sbjct: 135 LLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNCIN 193
Query: 198 PWAVNT 203
           P    T
Sbjct: 194 PGGTRT 199

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 30/204 (14%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM---------INERIQEWESKG 66
           + G  ALVTG  +GIG A  E L   GA V     D N+         ++E+ +  ++  
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALV--DWNLEAGVQCKAALHEQFEPQKTLF 62
Query: 67  FKVTGSVCDLSFGDQREKLIETVSSVFD--GKLNILVNNAALVVMKRATEYTLEEYSSVM 124
            +     CD++  DQ++ L +T   V D  G+L+ILVNNA +       E   E+   + 
Sbjct: 63  IQ-----CDVA--DQQQ-LRDTFRKVVDHFGRLDILVNNAGV-----NNEKNWEKTLQIN 109
Query: 125 STNVESSYHLCQLAHPLLKASGNASIVF-MSSVAGAISIPRLSAYAASKGAINQLTKN-- 181
             +V S  +L  L +   +  G   I+  MSS+AG + + +   Y ASK  I   T++  
Sbjct: 110 LVSVISGTYLG-LDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAA 168
Query: 182 LACEWATDSIRVNAVSPWAVNTQI 205
           LA       +R+NA+ P  VNT I
Sbjct: 169 LAANLMNSGVRLNAICPGFVNTAI 192

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 6/186 (3%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGSVCDL--SF 78
           LVTG + GIG       AR+GA+V   GR++  + +      E  G +    + DL    
Sbjct: 18  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 77
Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
            +  ++L + ++  +  +L+ +++NA L+  +   +E   + +  VM  NV +++ L Q 
Sbjct: 78  SEDCQQLAQRIAVNYP-RLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATFMLTQA 136
Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
             PLL  S   S+VF SS  G        AYAASK A   + + LA E+    +RVN ++
Sbjct: 137 LLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRLRVNCIN 195
Query: 198 PWAVNT 203
           P    T
Sbjct: 196 PGGTRT 201

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 130 SSYHL---CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           SSY L    + A P++   G  SIV ++ + G + +P  +    +K +++   K LA + 
Sbjct: 122 SSYSLTAVVKAARPMMTEGG--SIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADL 179
Query: 187 ATDSIRVNAVSPWAVNTQISP--PDLNDLL--VQEYVKLIAKTPLARSAEPNEISPLVAF 242
             ++IRVN++S   + T  +    D N +L  ++E      + PL R+  P E+    AF
Sbjct: 180 GKENIRVNSISAGPIRTLSAKGISDFNSILKDIEE------RAPLRRTTTPEEVGDTAAF 233
Query: 243 LCLPAASYITGQVISIDGGY 262
           L    +  ITG+ + +D G+
Sbjct: 234 LFSDMSRGITGENLHVDSGF 253

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 84/192 (43%), Gaps = 18/192 (9%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQ-------NMINE---RIQEWESKGFKVTG 71
           LVTG + GIG       AR+GA+V   GR++       + INE   R  +W    F +  
Sbjct: 14  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW----FILDL 69
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
             C      Q  + I       DG   +L N   L  +   +E   + +  VM  NV ++
Sbjct: 70  LTCTSENCQQLAQRIVVNYPRLDG---VLHNAGLLGDVCPMSEQNPQVWQDVMQINVNAT 126
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           + L Q   PLL  S   S+VF SS  G        AYAASK A   + + LA E+    +
Sbjct: 127 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY-QQRL 185
Query: 192 RVNAVSPWAVNT 203
           RVN ++P    T
Sbjct: 186 RVNCINPGGTRT 197

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 29/265 (10%)
Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESKGFK 68
           G     +R   A+VTGG  G+G A  + L   GA V     R ++++ +           
Sbjct: 1   GPGSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAAD 60
Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNA----ALVVMKRATEYTLEEYSSVM 124
           VT      S  D  E +         G L I+VN A    A+ V+ R   ++L  +  ++
Sbjct: 61  VTDEAAVASALDLAETM---------GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIV 111
Query: 125 STNVESSYHLCQLAHPLL--------KASGNASIVFMSSVAGAISIPRLSAYAASKGAIN 176
             N+  S+++ +LA   +         A     I+  +SVA        +AY+ASKG + 
Sbjct: 112 DINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVV 171
Query: 177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNE 235
            +T  +A + A+  IRV  ++P   +T    P L  L  +    L  + P  +R   P+E
Sbjct: 172 GMTLPIARDLASHRIRVMTIAPGLFDT----PLLASLPEEARASLGKQVPHPSRLGNPDE 227
Query: 236 ISPLVAFLCLPAASYITGQVISIDG 260
              L   +       + G+VI +DG
Sbjct: 228 YGALAVHII--ENPMLNGEVIRLDG 250

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 84  KLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLL 142
           +LIE V+S + G++++LV+N       +   +Y +E+Y   +       + L       +
Sbjct: 61  ELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQM 119
Query: 143 KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVN 202
           K   +  I+F++S         LS Y +++     L   L+ E    +I V A+ P  ++
Sbjct: 120 KKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLH 179
Query: 203 TQISP---PDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAASYITGQVISI 258
           ++ SP   P        E+V  + K T L R     E+  LVAFL   +  Y+TGQV  +
Sbjct: 180 SEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWL 239
Query: 259 DGGY 262
            GG+
Sbjct: 240 AGGF 243

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 22/202 (10%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-------QNMINERIQEWESKGF 67
           +L G T  +TG +RGIG AI    AR GA+V    +           I+       + G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62
Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
           +     CD+   DQ    +      F G ++ILVNNA+ + ++   +   + +      N
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLRGTLDTPXKRFDLXQQVN 121
Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL--------SAYAASKGAINQLT 179
              S+   Q   P L  + N  I+ ++        P L        + Y  +K   + +T
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPP------PSLNPAWWGAHTGYTLAKXGXSLVT 175
Query: 180 KNLACEWATDSIRVNAVSPWAV 201
             LA E+    + +NA+ P  V
Sbjct: 176 LGLAAEFGPQGVAINALWPRTV 197

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 20  TALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCD 75
            A++TG +RGIG AI   LAR G ++     +  R + + +E +QE   +G +V     D
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE---QGVEVFYHHLD 60
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S  +  E+  + V   F G ++++V NA L   KR  E + EE+  ++  N+   +   
Sbjct: 61  VSKAESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTL 119
Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +     LK +G  ++V  S V+  + IP    Y ++K A   L +    E     +R   
Sbjct: 120 KAFLDSLKRTGGLALVTTSDVSARL-IPYGGGYVSTKWAARALVRTFQIE--NPDVRFFE 176
Query: 196 VSPWAVNT 203
           + P AV+T
Sbjct: 177 LRPGAVDT 184

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 168 YAASKGAINQLTKNLACEWATDSIRVNAVSP-WAVNTQISPPDLNDLLVQEYVKLIAKTP 226
           Y  +KGA+  LT++ A E A   IRVN V P  +V     PP +       +    +K P
Sbjct: 197 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAV-------WEGHRSKVP 249
Query: 227 L-ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
           L  R +   E+S +V FLC   A YITG  + +DGGY+
Sbjct: 250 LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 116/256 (45%), Gaps = 15/256 (5%)
Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR---DQNMINERIQEWESKGFKVTG 71
           +L+    +VTGG  GIG AI   LA   A      R   D   ++   Q    +  + T 
Sbjct: 4   NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQ----RQPRATY 59
Query: 72  SVCDLSFGDQ-REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
              +L    Q R+ + +T+++   G+L+ LVNNA  V      +   + + + +  N+  
Sbjct: 60  LPVELQDDAQCRDAVAQTIATF--GRLDGLVNNAG-VNDGIGLDAGRDAFVASLERNLIH 116
Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
            Y +     P LKA+  A IV +SS          S Y ASKGA   LT+  A       
Sbjct: 117 YYAMAHYCVPHLKATRGA-IVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHG 175
Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQE--YVKLIAKTPLARS-AEPNEISPLVAFLCLPA 247
           +RVNAV P  V T +    +      E    ++ AK PL R    P+EI+    FL  P 
Sbjct: 176 VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPR 235
Query: 248 ASYITGQVISIDGGYT 263
           AS+ TG+ + +DGGYT
Sbjct: 236 ASHTTGEWLFVDGGYT 251

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 168 YAASKGAINQLTKNLACEWATDSIRVNAVSP-WAVNTQISPPDLNDLLVQEYVKLIAKTP 226
           Y  +KGA+  LT++ A E A   IRVN V P  +V     PP +       +    +K P
Sbjct: 213 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAV-------WEGHRSKVP 265
Query: 227 L-ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
           L  R +   E+S +V FLC   A YITG  + +DGGY+
Sbjct: 266 LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 303

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 20  TALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCD 75
            A++TG +RGIG AI   LAR G ++     +  R + + +E +QE   +G +V     D
Sbjct: 26  VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE---QGVEVFYHHLD 82
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S  +  E+  + V   F G ++++V NA L   KR  E + EE+  ++  N+   +   
Sbjct: 83  VSKAESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTL 141
Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +     LK +G  ++V  S V+  + IP    Y ++K A   L +    E     +R   
Sbjct: 142 KAFLDSLKRTGGLALVTTSDVSARL-IPYGGGYVSTKWAARALVRTFQIE--NPDVRFFE 198
Query: 196 VSPWAVNT 203
           + P AV+T
Sbjct: 199 LRPGAVDT 206

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 168 YAASKGAINQLTKNLACEWATDSIRVNAVSP-WAVNTQISPPDLNDLLVQEYVKLIAKTP 226
           Y  +KGA+  LT++ A E A   IRVN V P  +V     PP +       +    +K P
Sbjct: 234 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAV-------WEGHRSKVP 286
Query: 227 L-ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
           L  R +   E+S +V FLC   A YITG  + +DGGY+
Sbjct: 287 LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 168 YAASKGAINQLTKNLACEWATDSIRVNAVSP-WAVNTQISPPDLNDLLVQEYVKLIAKTP 226
           Y  +KGA+  LT++ A E A   IRVN V P  +V     PP +       +    +K P
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAV-------WEGHRSKVP 246
Query: 227 L-ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
           L  R +   E+S +V FLC   A YITG  + +DGGY+
Sbjct: 247 LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 284

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 110/270 (40%), Gaps = 38/270 (14%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           A+VTG  + IG AI  +L + G  V    H        + + + +  S     T  VC  
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN----TAVVCQA 81
Query: 77  SFGDQR------EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS-------- 122
              +        E++I +    F G+ ++LVNNA+        +   E+ S+        
Sbjct: 82  DLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 123 --VMSTNVESSYHLCQLAHPLLKA------SGNASIVFMSSVAGAISIPRLSAYAASKGA 174
             ++ TN  + + L        K       S N SIV +            S Y   K A
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 200
Query: 175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-SAEP 233
           +  LT++ A E A   IRVN V+P      + P  + +   +E  K   K PL R  A  
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGE---EEKDKWRRKVPLGRREASA 254
Query: 234 NEISPLVAFLCLPAASYITGQVISIDGGYT 263
            +I+  V FL   +A YITG +I +DGG +
Sbjct: 255 EQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 83/196 (42%), Gaps = 13/196 (6%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD--------QNMINERIQEWESKGF 67
           L+    LVTG + GIG       AR+GA+V   GR+        Q++ +E  Q  + + F
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADE--QHVQPQWF 70
Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
            +    C      Q    I       DG   +L N   L  +   +E   + +  V   N
Sbjct: 71  TLDLLTCTAEECRQVADRIAAHYPRLDG---VLHNAGLLGEIGPXSEQDPQIWQDVXQVN 127
Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           V +++ L Q   PLL  S   S+VF SS  G        AYA SK A     + LA E+ 
Sbjct: 128 VNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQ 187
Query: 188 TDSIRVNAVSPWAVNT 203
             S+RVN ++P    T
Sbjct: 188 NRSLRVNCINPGGTRT 203

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 110/270 (40%), Gaps = 38/270 (14%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           A+VTG  + IG AI  +L + G  V    H        + + + +  S     T  VC  
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN----TAVVCQA 81
Query: 77  SFGDQR------EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS-------- 122
              +        E++I +    F G+ ++LVNNA+        +   E+ S+        
Sbjct: 82  DLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140
Query: 123 --VMSTNVESSYHLCQLAHPLLKA------SGNASIVFMSSVAGAISIPRLSAYAASKGA 174
             ++ TN  + + L        K       S N SIV +            S Y   K A
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHA 200
Query: 175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-SAEP 233
           +  LT++ A E A   IRVN V+P      + P  + +   +E  K   K PL R  A  
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGE---EEKDKWRRKVPLGRREASA 254
Query: 234 NEISPLVAFLCLPAASYITGQVISIDGGYT 263
            +I+  V FL   +A YITG +I +DGG +
Sbjct: 255 EQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 110/270 (40%), Gaps = 38/270 (14%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           A+VTG  + IG AI  +L + G  V    H        + + + +  S     T  VC  
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN----TAVVCQA 61
Query: 77  SFGDQR------EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS-------- 122
              +        E++I +    F G+ ++LVNNA+        +   E+ S+        
Sbjct: 62  DLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 120
Query: 123 --VMSTNVESSYHLCQLAHPLLKA------SGNASIVFMSSVAGAISIPRLSAYAASKGA 174
             ++ TN  + + L        K       S N SIV +            S Y   K A
Sbjct: 121 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 180
Query: 175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-SAEP 233
           +  LT++ A E A   IRVN V+P      + P  + +   +E  K   K PL R  A  
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGE---EEKDKWRRKVPLGRREASA 234
Query: 234 NEISPLVAFLCLPAASYITGQVISIDGGYT 263
            +I+  V FL   +A YITG +I +DGG +
Sbjct: 235 EQIADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein) Reductase From Burkholderia Pseudomallei 1719b Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 19/259 (7%)
Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV---HTCGRDQNMINERIQEWESKGFKVT 70
           L G   L+TG    R I Y I +   R GA +   +   R ++ I E   E+ S+     
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSE----L 67
Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKR-ATEY----TLEEYSSVMS 125
              CD++   Q + L  ++ + +D  L+ LV++      +  A ++    T E +     
Sbjct: 68  VFPCDVADDAQIDALFASLKTHWD-SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHD 126
Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            +  S   L + A P+L  S +AS++ +S +    +IP  +    +K A+    + LA  
Sbjct: 127 ISAYSFPALAKAALPML--SDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVS 184
Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
                +RVNA+S   + T  +    +   + ++V+  + +PL R+    ++    AFL  
Sbjct: 185 LGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVE--SNSPLKRNVTIEQVGNAGAFLLS 242
Query: 246 PAASYITGQVISIDGGYTA 264
             AS +T +V+ +D G+ A
Sbjct: 243 DLASGVTAEVMHVDSGFNA 261

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 21/233 (9%)
Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE--RIQEWESKGFKVTG 71
            SL+   A+VTG T G+G  IV++L+R    V+  GR+   +     I+  E     +  
Sbjct: 1   MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVK 59
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
            V +    D+ + L           ++ LV+ AA+         ++ E+ + +  NV   
Sbjct: 60  EVLEEGGVDKLKNL---------DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVP 110
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             L +   P L+A+ +  +++++S AG    P  + YAASK A+  L      E A + I
Sbjct: 111 AELSRQLLPALRAA-SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGI 169
Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
           RV+ VSP   NT    P L  L+  +      +  +    EP EI+  + F+ 
Sbjct: 170 RVSTVSPGPTNT----PMLQGLMDSQGTNFRPEIYI----EPKEIANAIRFVI 214

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 116/277 (41%), Gaps = 45/277 (16%)
Query: 22  LVTGGTRGIGYAIVEELARFGASV------HTCGRDQNMINERIQEWESKGFKV--TGSV 73
           LVTGG RG G +   +LA  GA +      H    ++  +    ++ E  G +V  TG  
Sbjct: 14  LVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATS-RDLEEAGLEVEKTGRK 72
Query: 74  CDLSFGDQREKLI---ETVSSVFD-GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
              +  D R++     E  ++V + GKL+++V NA +  +       ++ ++     +  
Sbjct: 73  AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPL--GAHLPVQAFADAFDVDFV 130
Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA-----------YAASKGAINQL 178
              +    A P L  +  ASI+   SVAG I+  +              Y+ +K  ++  
Sbjct: 131 GVINTVHAALPYL--TSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSY 188
Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQI---SP------PDLN-----DLLVQEYVKLIAK 224
           T  LA + A  SIR N + P  VNT +   +P      PDL      D L+         
Sbjct: 189 TLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMP 248
Query: 225 TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG 261
           TP     E ++IS  V FL    + Y+TG    +D G
Sbjct: 249 TPY---VEASDISNAVCFLASDESRYVTGLQFKVDAG 282

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-------MINERIQEWESKGFK 68
           L G T  +TG +RGIG AI  + A+ GA++    +           I    +E E+ G K
Sbjct: 43  LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 102
Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
               + D+    Q    +E     F G ++ILVNNA+ + +    +   +    +M+ N 
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGG-IDILVNNASAISLTNTLDTPTKRLDLMMNVNT 161
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSV--AGAISIPRLSAYAASKGAINQLTKNLACEW 186
             +Y   +   P LK S  A I+ +S       +   +  AY  +K  ++     +A E+
Sbjct: 162 RGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF 221
Query: 187 ATDSIRVNAVSP 198
             + I VNA+ P
Sbjct: 222 KGE-IAVNALWP 232

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 130 SSYHLCQLAH---PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           SSY L  +AH    L+   G  SIV  + + G  ++   +    +K ++    K LA + 
Sbjct: 142 SSYSLTIVAHEAKKLMPEGG--SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDL 199
Query: 187 ATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
             D+IRVNA+S   + T  +      N +L +    +  + PL R+ +  E+    A+L 
Sbjct: 200 GPDNIRVNAISAGPIRTLSAKGVGGFNTILKE----IEERAPLKRNVDQVEVGKTAAYLL 255
Query: 245 LPAASYITGQVISIDGGYTA 264
              +S +TG+ I +D G+ A
Sbjct: 256 SDLSSGVTGENIHVDSGFHA 275

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 130 SSYHLCQLAH---PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           SSY L  +AH    L+   G  SIV  + + G  ++   +    +K ++    K LA + 
Sbjct: 121 SSYSLTIVAHEAKKLMPEGG--SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDL 178
Query: 187 ATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
             D+IRVNA+S   + T  +      N +L +    +  + PL R+ +  E+    A+L 
Sbjct: 179 GPDNIRVNAISAGPIRTLSAKGVGGFNTILKE----IKERAPLKRNVDQVEVGKTAAYLL 234
Query: 245 LPAASYITGQVISIDGGYTA 264
              +S +TG+ I +D G+ A
Sbjct: 235 SDLSSGVTGENIHVDSGFHA 254

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 28/252 (11%)
Query: 29  GIGYAIVEELARF----GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREK 84
           G+G A+   LAR     GA +    R    + +  ++    G +      D++   Q   
Sbjct: 18  GVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAH 77
Query: 85  LIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLK 143
           L++     + G++++++NNA  V  MK     T E     +   V  +  L Q   P L+
Sbjct: 78  LVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALE 136
Query: 144 ASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP---W- 199
            S  A +V ++S+    S  +  AY  +K A+  +++ LA E     IRVN+V P   W 
Sbjct: 137 ESKGA-VVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWG 195
Query: 200 ----------AVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
                     A     S  D+       Y    A + L R    +E++  + F+    AS
Sbjct: 196 GTLKSYFEHQAGKYGTSVEDI-------YNAAAAGSDLKRLPTEDEVASAILFMASDLAS 248
Query: 250 YITGQVISIDGG 261
            ITGQ + ++ G
Sbjct: 249 GITGQALDVNCG 260

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 130 SSYHLCQLAH---PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           SSY L  +AH    L+   G  SIV  + + G  ++   +    +K ++    K LA + 
Sbjct: 121 SSYSLTIVAHEAKKLMPEGG--SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDL 178
Query: 187 ATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
             D+IRVNA+S   + T  +      N +L +    +  + PL R+ +  E+    A+L 
Sbjct: 179 GPDNIRVNAISAGPIRTLSAKGVGGFNTILKE----IEERAPLKRNVDQVEVGKTAAYLL 234
Query: 245 LPAASYITGQVISIDGGYTA 264
              +S +TG+ I +D G+ A
Sbjct: 235 SDLSSGVTGENIHVDSGFHA 254

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 130 SSYHLCQLAH---PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           SSY L  +AH    L+   G  SIV  + + G  ++   +    +K ++    K LA + 
Sbjct: 125 SSYSLTIVAHEAKKLMPEGG--SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDL 182
Query: 187 ATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
             D+IRVNA+S   + T  +      N +L +    +  + PL R+ +  E+    A+L 
Sbjct: 183 GPDNIRVNAISAGPIRTLSAKGVGGFNTILKE----IEERAPLKRNVDQVEVGKTAAYLL 238
Query: 245 LPAASYITGQVISIDGGYTA 264
              +S +TG+ I +D G+ A
Sbjct: 239 SDLSSGVTGENIHVDSGFHA 258

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 130 SSYHLCQLAH---PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           SSY L  +AH    L+   G  SIV  + + G  ++   +    +K ++    K LA + 
Sbjct: 147 SSYSLTIVAHEAKKLMPEGG--SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDL 204
Query: 187 ATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
             D+IRVNA+S   + T  +      N +L +    +  + PL R+ +  E+    A+L 
Sbjct: 205 GPDNIRVNAISAGPIRTLSAKGVGGFNTILKE----IEERAPLKRNVDQVEVGKTAAYLL 260
Query: 245 LPAASYITGQVISIDGGYTA 264
              +S +TG+ I +D G+ A
Sbjct: 261 SDLSSGVTGENIHVDSGFHA 280

>pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of Arthrobacter Sp. Ad2 Length = 244

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L Q A   L+A+G AS++F++S  G   +     Y  ++ A   L ++ A   + D I +
Sbjct: 113 LLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILL 172
Query: 194 NAVSPWAVNTQISPPDL---NDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
            A+ P   N     P     N+  ++E V      PL R   P+E+  L+ FL    A+ 
Sbjct: 173 YAIGPNFFNNPTYFPTSDWENNPELRERVD--RDVPLGRLGRPDEMGALITFLASRRAAP 230
Query: 251 ITGQVISIDGGY 262
           I GQ  +  GGY
Sbjct: 231 IVGQFFAFTGGY 242

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTG 71
           K S  G  ALVTGG  G+G  I + L+  G SV   GR  ++++    E   + G  V  
Sbjct: 28  KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRA 87
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRA-TEYTLEEYSSVMSTNVES 130
            VCD+   DQ   L   V + F  +L++LVNNA   V      E T E+++ +++ N+  
Sbjct: 88  VVCDVGDPDQVAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTG 146
Query: 131 SYHLCQLAHPLLKASG--NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           ++   Q A    KA       I+   S++     P  + Y A+K AI  LTK+ A +   
Sbjct: 147 AFLCTQHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRX 206
Query: 189 DSI 191
             I
Sbjct: 207 HDI 209

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 21  ALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           ALVTG  +GIG+AIV +L R F   V    RD       +++ +++G        D+   
Sbjct: 7   ALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDIIDL 66
Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
                L + +   + G L++LVNNAA+   +   T + ++   + M TN   + ++C   
Sbjct: 67  QSIRALCDFLRKEYGG-LDVLVNNAAIAFQLDNPTPFHIQAELT-MKTNFMGTRNVCTEL 124
Query: 139 HPLLKASGNASIVFMSSVAG 158
            PL+K  G   +V +SS  G
Sbjct: 125 LPLIKPQGR--VVNVSSTEG 142

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 34/268 (12%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           A+VTG  + IG AI  +L + G  V    H        + + + +  S    V  +  DL
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQA--DL 63
Query: 77  SFGD----QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS---------- 122
           +  +      E++I +    F G+ ++LVNNA+        +   E+ S+          
Sbjct: 64  TNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAE 122
Query: 123 VMSTNVESSYHLCQLAHPLLKA------SGNASIVFMSSVAGAISIPRLSAYAASKGAIN 176
           ++ TN  + + L        K       S N SIV +            S Y   K A+ 
Sbjct: 123 LIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALV 182
Query: 177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-SAEPNE 235
            LT++ A E A   IRVN V+P      + P  + +   +E  K   K PL R  A   +
Sbjct: 183 GLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGE---EEKDKWRRKVPLGRREASAEQ 236
Query: 236 ISPLVAFLCLPAASYITGQVISIDGGYT 263
           I+  V FL   +A YITG +I +DGG +
Sbjct: 237 IADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 34/268 (12%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           A+VTG  + IG AI  +L + G  V    H        + + + +  S    V  +  DL
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQA--DL 63
Query: 77  SFGD----QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS---------- 122
           +  +      E++I +    F G+ ++LVNNA+        +   E+ S+          
Sbjct: 64  TNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAE 122
Query: 123 VMSTNVESSYHLCQLAHPLLKA------SGNASIVFMSSVAGAISIPRLSAYAASKGAIN 176
           ++ TN  + + L        K       S N SIV +            S Y   K A+ 
Sbjct: 123 LIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALV 182
Query: 177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-SAEPNE 235
            LT++ A E A   IRVN V+P      + P  + +   +E  K   K PL R  A   +
Sbjct: 183 GLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGE---EEKDKWRRKVPLGRREASAEQ 236
Query: 236 ISPLVAFLCLPAASYITGQVISIDGGYT 263
           I+  V FL   +A YITG +I +DGG +
Sbjct: 237 IADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 34/268 (12%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           A+VTG  + IG AI  +L + G  V    H        + + + +  S    V  +  DL
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQA--DL 83
Query: 77  SFGD----QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS---------- 122
           +  +      E++I +    F G+ ++LVNNA+        +   E+ S+          
Sbjct: 84  TNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAE 142
Query: 123 VMSTNVESSYHLCQLAHPLLKA------SGNASIVFMSSVAGAISIPRLSAYAASKGAIN 176
           ++ TN  + + L        K       S N SIV +            S Y   K A+ 
Sbjct: 143 LIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALV 202
Query: 177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-SAEPNE 235
            LT++ A E A   IRVN V+P      + P  + +   +E  K   K PL R  A   +
Sbjct: 203 GLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGE---EEKDKWRRKVPLGRREASAEQ 256
Query: 236 ISPLVAFLCLPAASYITGQVISIDGGYT 263
           I+  V FL   +A YITG +I +DGG +
Sbjct: 257 IADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 34/268 (12%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           A+VTG  + IG AI  +L + G  V    H        + + + +  S    V  +  DL
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQA--DL 83
Query: 77  SFGD----QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS---------- 122
           +  +      E++I +    F G+ ++LVNNA+        +   E+ S+          
Sbjct: 84  TNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAE 142
Query: 123 VMSTNVESSYHLCQLAHPLLKA------SGNASIVFMSSVAGAISIPRLSAYAASKGAIN 176
           ++ TN  + + L        K       S N SIV +            S Y   K A+ 
Sbjct: 143 LIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALV 202
Query: 177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-SAEPNE 235
            LT++ A E A   IRVN V+P      + P  + +   +E  K   K PL R  A   +
Sbjct: 203 GLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGE---EEKDKWRRKVPLGRREASAEQ 256
Query: 236 ISPLVAFLCLPAASYITGQVISIDGGYT 263
           I+  V FL   +A YITG +I +DGG +
Sbjct: 257 IADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 21  ALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           ALVTGG +GIG AIV +L R F   V    RD       +Q+ +++G        D+   
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66
Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV-MSTNVESSYHLCQLA 138
                L + +   + G L++LVNNA  +  K A        + V M TN   +  +C   
Sbjct: 67  QSIRALRDFLRKEYGG-LDVLVNNAG-IAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 124
Query: 139 HPLLKASGNASIVFMSSV 156
            PL+K  G   +V +SS+
Sbjct: 125 LPLIKPQGR--VVNVSSI 140

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGSVCDL--SF 78
           LVTG + GIG       AR+GA+V   GR++  + +      E  G +    + DL    
Sbjct: 16  LVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 75
Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
            +  ++L + ++  +  +L+ +++NA L+  +   +E   + +  V   NV +++ L Q 
Sbjct: 76  SENCQQLAQRIAVNYP-RLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVNATFXLTQA 134
Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
             PLL  S   S+VF SS  G        AYAASK A     + LA E+    +RVN ++
Sbjct: 135 LLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEY-QQRLRVNCIN 193
Query: 198 PWAVNT 203
           P    T
Sbjct: 194 PGGTRT 199

>pdb|3K2E|A Chain A, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) Reductase From Anaplasma Phagocytophilum At 1.9a Resolution Length = 296

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 63  ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLE 118
           ES G K+T   CD+S  +  + + + ++  + G L+ +V+  A      +  R  + +L 
Sbjct: 77  ESLGVKLT-VPCDVSDAESVDNMFKVLAEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLG 134
Query: 119 EYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL 178
            + + M  +  S  ++   A PL+   G  SI+ +S       +P  +     K A+   
Sbjct: 135 NFLTSMHISCYSFTYIASKAEPLMTNGG--SILTLSYYGAEKVVPHYNVMGVCKAALEAS 192
Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQISP--PDLNDLLV-QEYVKLIAKTPLARSAEPNE 235
            K LA +     IRVNA+S   V T  S    D + +L   +Y      +PL R+   ++
Sbjct: 193 VKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKY-----NSPLRRNTTLDD 247
Query: 236 ISPLVAFLCLPAASYITGQVISIDGGY 262
           +     +L        TG+ + +D GY
Sbjct: 248 VGGAALYLLSDLGRGTTGETVHVDCGY 274

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCG----RDQNMINERIQEWESKGFKVTG 71
             G +A+V+GG  G+G A V  L   G  V        + + + +E     E     VT 
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTS 87
Query: 72  S---VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
               +  +   +Q  +L   V  V  G   +    A  +V +  +   +  ++  +   +
Sbjct: 88  EDSVLAAIEAANQLGRLRYAV--VAHGGFGV----AQRIVQRDGSPADMGGFTKTIDLYL 141
Query: 129 ESSYHLCQLAHPLLKASG------NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
             +Y++ +L    + A+         ++V  +S+AG       +AYAA+K  +  LT   
Sbjct: 142 NGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAA 201
Query: 183 ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLVA 241
           A + ++  IRVN ++P  + T    P +  +  +   K  A  P   R   P+E +   A
Sbjct: 202 ARDLSSAGIRVNTIAPGTMKT----PIMESVGEEALAKFAANIPFPKRLGTPDEFADAAA 257
Query: 242 FLCLPAASYITGQVISIDG 260
           FL      YI G+V+ +DG
Sbjct: 258 FLLTN--GYINGEVMRLDG 274

>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster Length = 267

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 22  LVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           L+TG  RG+G  +V+ L         + T  R++    E +++       +     DL  
Sbjct: 25  LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRN 83
Query: 79  GDQREKLIETVSSVF-DGKLNILVNNAALVVMK-RATEYTLEEYSSVMSTNVESSYHLCQ 136
            D  +KL+  +  V  D  LN+L NNA +     R T    +E    + TN      L +
Sbjct: 84  FDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIXLAK 143
Query: 137 LAHPLLKAS-----------GNASIVFMSSVAGAI---SIPRLSAYAASKGAINQLTKNL 182
              PLLK +           G A+I+  SS+ G+I   +     AY  SK A+N  TK+L
Sbjct: 144 ACLPLLKKAAKANESQPXGVGRAAIINXSSILGSIQGNTDGGXYAYRTSKSALNAATKSL 203
Query: 183 ACEWATDSIRVNAVSPWAVNT 203
           + +     I   ++ P  V T
Sbjct: 204 SVDLYPQRIXCVSLHPGWVKT 224

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 27/259 (10%)
Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+    +VTG + G+G A+   LA+ GA+V           E   E    G  V     D
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNAD 61
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSVMSTNVESS 131
           ++        +      F G ++ LVN A       ++ R+  + L+ ++  ++ N+  +
Sbjct: 62  VTNEADATAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120
Query: 132 YHLCQLAHPLL-----KASGNAS-IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
           ++  +LA  +       A G    IV  +S+A        +AYAASKG +  LT   A E
Sbjct: 121 FNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARE 180
Query: 186 WATDSIRVNAVSPWAVNTQI---SPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLVA 241
            A   IRV  ++P   +T      P D+ D L        A  P   R     E + LV 
Sbjct: 181 LARFGIRVVTIAPGIFDTPXXAGXPQDVQDALA-------ASVPFPPRLGRAEEYAALVK 233
Query: 242 FLCLPAASYITGQVISIDG 260
            +C    + + G+VI +DG
Sbjct: 234 HIC--ENTXLNGEVIRLDG 250

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 82/192 (42%), Gaps = 18/192 (9%)
Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQ-------NMINE---RIQEWESKGFKVTG 71
           LVTG + GIG       AR+GA+V   GR++       + INE   R  +W    F +  
Sbjct: 37  LVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQW----FILDL 92
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
             C      Q  + I       DG   +L N   L  +   +E   + +  V   NV ++
Sbjct: 93  LTCTSENCQQLAQRIVVNYPRLDG---VLHNAGLLGDVCPXSEQNPQVWQDVXQINVNAT 149
Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           + L Q   PLL  S   S+VF SS  G        AYAASK A     + LA E+    +
Sbjct: 150 FXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEY-QQRL 208
Query: 192 RVNAVSPWAVNT 203
           RVN ++P    T
Sbjct: 209 RVNCINPGGTRT 220

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 21  ALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           ALVTG  RGIG AI  EL R F   V    RD       +Q+ +++G        D+   
Sbjct: 5   ALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDDL 64
Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLE-EYSSVMSTNVESSYHLCQLA 138
                L + +   + G LN+LVNNAA V  K       + +    + TN  ++ ++C   
Sbjct: 65  QSIRALRDFLRKEY-GGLNVLVNNAA-VAFKSDDPMPFDIKAEMTLKTNFFATRNMCNEL 122
Query: 139 HPLLKASGNASIVFMSSV 156
            P++K  G   +V +SS+
Sbjct: 123 LPIMKPHGR--VVNISSL 138

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ--EWESKGFKVTGSVCD 75
           G TA VTGG  G+G  +V +L   G  V      Q+ I++ +   E E  G +V G   D
Sbjct: 8   GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLD 67
Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  +  +   + V + F G ++IL NNA + + +   E + +++  ++  N+    +  
Sbjct: 68  VASREGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGV 126
Query: 136 QLAHPLL----KA--SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
               P +    KA       +V  +S+A  ++      Y  +K A+  L+++L       
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKY 186
Query: 190 SIRVNAVSPWAVNTQI-SPPDLNDLLVQEYVKLIAKTPLARSAEPNEI 236
            I V+ + P  V + I +  D+    ++  VK + KT + R A  +E 
Sbjct: 187 EIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEF 234

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 108 VMKRATEYTLEEYSSVMSTNVESSYHLCQLA------HPLLKASGNASIVFMSSVAGAIS 161
           ++ +   + LE +  V+  N+  ++++ +LA      +P         IV  +SVA    
Sbjct: 82  ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG 141
Query: 162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKL 221
               +AYAASKG +  LT   A E A   IRV  V+P   +T    P L  L  +    L
Sbjct: 142 QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDT----PLLQGLPEKAKASL 197
Query: 222 IAKTPL-ARSAEPNEISPLVAFLCLPAASYITGQVISIDG 260
            A+ P   R   P E + LV  L +     + G+V+ +DG
Sbjct: 198 AAQVPFPPRLGRPEEYAALV--LHILENPMLNGEVVRLDG 235

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 148 ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP 207
           ++++ +S +    +IP  +    +K ++    + +A     + +RVNA+S   + T  + 
Sbjct: 142 SALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 201
Query: 208 PDLNDLLVQEYVKLIAK----TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
                  ++++ K++A     TP+ R+    ++    AFLC   ++ I+G+V+ +DGG++
Sbjct: 202 G------IKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 255

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 148 ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP 207
           ++++ +S +    +IP  +    +K ++    + +A     + +RVNA+S   + T  + 
Sbjct: 138 SALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 197
Query: 208 PDLNDLLVQEYVKLIAK----TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
                  ++++ K++A     TP+ R+    ++    AFLC   ++ I+G+V+ +DGG++
Sbjct: 198 G------IKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 251

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 148 ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP 207
           ++++ +S +    +IP  +    +K ++    + +A     + +RVNA+S   + T  + 
Sbjct: 139 SALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 198
Query: 208 PDLNDLLVQEYVKLIAK----TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
                  ++++ K++A     TP+ R+    ++    AFLC   ++ I+G+V+ +DGG++
Sbjct: 199 G------IKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 148 ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP 207
           ++++ +S +    +IP  +    +K ++    + +A     + +RVNA+S   + T  + 
Sbjct: 139 SALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 198
Query: 208 PDLNDLLVQEYVKLIAK----TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
                  ++++ K++A     TP+ R+    ++    AFLC   ++ I+G+V+ +DGG++
Sbjct: 199 G------IKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 148 ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP 207
           ++++ +S +    +IP  +    +K ++    + +A     + +RVNA+S   + T  + 
Sbjct: 139 SALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 198
Query: 208 PDLNDLLVQEYVKLIAK----TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
                  ++++ K++A     TP+ R+    ++    AFLC   ++ I+G+V+ +DGG++
Sbjct: 199 G------IKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 148 ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP 207
           ++++ +S +    +IP  +    +K ++    + +A     + +RVNA+S   + T  + 
Sbjct: 139 SALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 198
Query: 208 PDLNDLLVQEYVKLIAK----TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
                  ++++ K++A     TP+ R+    ++    AFLC   ++ I+G+V+ +DGG++
Sbjct: 199 G------IKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 21  ALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           ALVTGG +GIG AIV +L R F   V    RD       +Q+ +++G        D+   
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66
Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV-MSTNVESSYHLCQLA 138
                L + +   + G L++LVNNA  +  K A        + V M TN   +  +    
Sbjct: 67  QSIRALRDFLRKEYGG-LDVLVNNAG-IAFKVADPTPFHIQAEVTMKTNFFGTRDVXTEL 124
Query: 139 HPLLKASGNASIVFMSSV 156
            PL+K  G   +V +SS+
Sbjct: 125 LPLIKPQGR--VVNVSSI 140

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA 228
           AA   AI   TK LA E A   IRVNA+SP    T+       D     Y +  +  P+ 
Sbjct: 131 AAINAAIEATTKVLAKELA--PIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVG 188
Query: 229 RSAEPNEISPLVAFLCLPAASYITGQVISIDGG 261
           +  E ++I+  +A+L     SY+TG VI +DGG
Sbjct: 189 KVGEASDIA--MAYLFAIQNSYMTGTVIDVDGG 219

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 5/187 (2%)
Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC---DLS 77
           A++TG ++GIG  I   LA  G  V    R +  + +   E       V   +    D++
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDIT 69
Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
              + +  I+ +   + G ++ILVN AA       +E  ++ +  +   NV + Y + + 
Sbjct: 70  DCTKADTEIKDIHQKY-GAVDILVNAAAXFXDGSLSE-PVDNFRKIXEINVIAQYGILKT 127
Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
              + K   N  I  ++S A          Y ++K A+  L ++L  E A   IRV  + 
Sbjct: 128 VTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLC 187
Query: 198 PWAVNTQ 204
           P  VNT 
Sbjct: 188 PGWVNTD 194

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
           A  ++   GN  I+ ++ + G   +   +    +K ++    K LA +     IRVNA+S
Sbjct: 132 AKKVMTEGGN--ILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNAIS 189
Query: 198 PWAVNTQISPP--DLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
              + T  +    D N +L +    +  + PL R+    E+     FL    A  +TG+ 
Sbjct: 190 AGPIRTLSAKGVGDFNSILRE----IEERAPLRRTTTQEEVGDTAVFLFSDLARGVTGEN 245
Query: 256 ISIDGGY 262
           I +D GY
Sbjct: 246 IHVDSGY 252

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
           A  ++   GN  I+ ++ + G   +   +    +K ++    K LA +     IRVNA+S
Sbjct: 132 AKKVMTEGGN--ILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNAIS 189
Query: 198 PWAVNTQISPP--DLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
              + T  +    D N +L +    +  + PL R+    E+     FL    A  +TG+ 
Sbjct: 190 AGPIRTLSAKGVGDFNSILRE----IEERAPLRRTTTQEEVGDTAVFLFSDLARGVTGEN 245
Query: 256 ISIDGGY 262
           I +D GY
Sbjct: 246 IHVDSGY 252

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGS 72
           L+G   L+ G    R I + I +     GA +       + + +R++   E  G  V G 
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFT-YQGDALKKRVEPLAEELGAFVAGH 87
Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSVMSTNV 128
            CD++     + + ET+   + GKL+ LV+         +  R  + +   +++ M  +V
Sbjct: 88  -CDVADAASIDAVFETLEKKW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISV 145
Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            S   + + A  L+   G  SI+ ++       +P  +    +K A+    K LA +   
Sbjct: 146 YSLTAVSRRAEKLMADGG--SILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGP 203
Query: 189 DSIRVNAVSPWAVNTQISPPDLND----LLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
            +IRVNA+S   + T ++   + D    L   EY       PL R+   +E+  +  +  
Sbjct: 204 QNIRVNAISAGPIKT-LAASGIGDFRYILKWNEY-----NAPLRRTVTIDEVGDVGLYFL 257
Query: 245 LPAASYITGQVISIDGGY 262
              +  +TG+V   D GY
Sbjct: 258 SDLSRSVTGEVHHADSGY 275

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 18/193 (9%)
Query: 14  WSLRGMTALVTGGTRGIG-----YAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK 68
           W   G T LVTGGT  +G     + ++E   R    V   G   +   E + +  + G +
Sbjct: 527 WDAAG-TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAE 585
Query: 69  VTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATE-YTLEEYSSVMSTN 127
           V+   CD++    RE L + ++S+ D      V +AA V+    +E  T+E    V+   
Sbjct: 586 VSLQACDVA---DRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPK 642
Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           V+ + +L +L  P      + ++V  SSV+G +       YAA+   ++ L +       
Sbjct: 643 VDGARNLLELIDP------DVALVLFSSVSGVLGSGGQGNYAAANSFLDALAQQRQSRGL 696
Query: 188 TDSIRVNAVSPWA 200
               R  A  PWA
Sbjct: 697 --PTRSLAWGPWA 707

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 24/259 (9%)
Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVTG 71
           L G   L+ G    R I + I +  +  GA +    + +    +R++    E KGF V G
Sbjct: 12  LYGKRGLILGLANNRSIAWGIAKTASSAGAELAFTYQGE-AXKKRVEPLAEEVKGF-VCG 69
Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSVMSTN 127
             CD+S     + +  T+   + GKL+ LV+         +  R  + +   +    + +
Sbjct: 70  H-CDVSDSASIDAVFNTIEKKW-GKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNIS 127
Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           V S   L + A  L    G  SI+ ++       +P  +    +K A+    K LA +  
Sbjct: 128 VYSLTALTKRAEKLXSDGG--SILTLTYYGAEKVVPNYNVXGVAKAALEASVKYLAVDLG 185
Query: 188 TDSIRVNAVSPWAVNTQISPPDLND----LLVQEYVKLIAKTPLARSAEPNEISPLVAFL 243
              IRVNA+S   + T ++   + D    L   EY       PL R+    E+     +L
Sbjct: 186 PKHIRVNAISAGPIKT-LAASGIGDFRYILKWNEY-----NAPLRRTVTIEEVGDSALYL 239
Query: 244 CLPAASYITGQVISIDGGY 262
               +  +TG+V  +D GY
Sbjct: 240 LSDLSRSVTGEVHHVDSGY 258

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	266
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-129
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-128
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-127
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	6e-82
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	6e-78
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-77
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-77
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	5e-77
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-76
4e4y_A	244	Short chain dehydrogenase family protein; structur	2e-75
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	2e-75
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-74
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	5e-74
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	6e-74
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	8e-73
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-72
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-72
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-72
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-72
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-72
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-72
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-72
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	4e-72
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	6e-72
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	7e-72
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	8e-72
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-71
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-71
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	6e-71
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-70
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-70
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-70
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-70
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-70
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-70
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-70
1xkq_A	280	Short-chain reductase family member (5D234); parra	5e-70
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	5e-70
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	5e-70
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	6e-70
3cxt_A	291	Dehydrogenase with different specificities; rossma	6e-70
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	7e-70
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-69
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-69
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-69
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-69
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-69
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	7e-69
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-68
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-68
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-68
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-68
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	6e-68
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	9e-68
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-67
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-67
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	3e-67
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-67
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	7e-67
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	7e-67
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	8e-67
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-66
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-66
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-66
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-65
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-65
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-65
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	7e-65
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-64
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-64
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-64
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-64
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-64
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	5e-64
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	7e-64
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	8e-64
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	9e-64
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-63
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-63
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-63
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-62
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	3e-62
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	5e-62
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	9e-62
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-61
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-61
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-61
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-61
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-61
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-60
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-60
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	8e-60
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-59
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-59
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-59
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-59
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	4e-59
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	4e-59
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	5e-59
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	7e-59
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-58
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	6e-58
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	7e-58
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-57
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-57
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	6e-57
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	6e-57
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	7e-57
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	8e-57
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	8e-57
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	8e-57
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	9e-57
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-56
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-56
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-56
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-56
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-56
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-56
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-56
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-56
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-56
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	3e-56
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	4e-56
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	8e-56
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-55
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	8e-55
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-54
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-54
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-54
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-54
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	4e-54
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-54
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	4e-54
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	6e-54
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-53
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-53
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-53
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	5e-53
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	7e-53
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	7e-53
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-52
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-52
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-52
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-52
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	4e-51
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-50
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	6e-49
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-48
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	6e-48
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-47
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	8e-46
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-45
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	5e-44
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-43
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-43
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	4e-43
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	6e-43
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-42
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	5e-41
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	7e-40
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-39
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-39
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-39
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	9e-39
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	6e-38
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	6e-38
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-33
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-36
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	4e-36
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-35
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-34
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-34
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	8e-33
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-32
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-32
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	4e-32
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	5e-32
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	7e-32
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	8e-32
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-31
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-30
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	5e-30
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	4e-26
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-25
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-24
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-24
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	3e-16
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	4e-16
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	4e-16
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	1e-15
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	1e-15
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-15
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-15
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	2e-15
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	2e-15
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	4e-15
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	5e-15
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	7e-15
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	9e-15
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	5e-14
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-12
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	3e-11
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	2e-10
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	3e-09
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-08
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	6e-08
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	2e-07
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-07
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	2e-06
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	3e-06
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-05
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	2e-05
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	8e-05
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	2e-04

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  365 bits (939), Expect = e-129
 Identities = 141/269 (52%), Positives = 196/269 (72%), Gaps = 5/269 (1%)

Query: 1   MAE---AAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE 57
           M E   +      + +WSL+G TALVTGG++GIGYAIVEELA  GA V+TC R++  ++E
Sbjct: 1   MEESKVSMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE 60

Query: 58  RIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTL 117
            ++ W  KG  V GSVCDL    +R+KL++TV+ VFDGKLNILVNNA +V+ K A ++T 
Sbjct: 61  CLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTE 120

Query: 118 EEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ 177
           ++Y+ +M TN E++YHL Q+A+PLLKAS N +++F+SS+AG  ++P +S Y+ASKGAINQ
Sbjct: 121 KDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQ 180

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNE 235
           +TK+LACEWA D+IRVN+V+P  + T +    +     Q+      I KTP+ R+ +P E
Sbjct: 181 MTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQE 240

Query: 236 ISPLVAFLCLPAASYITGQVISIDGGYTA 264
           +S L+AFLC PAASYITGQ+I  DGG+TA
Sbjct: 241 VSALIAFLCFPAASYITGQIIWADGGFTA 269

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  362 bits (932), Expect = e-128
 Identities = 137/255 (53%), Positives = 185/255 (72%), Gaps = 1/255 (0%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
             +W+L G TALVTGG+RGIGY IVEELA  GASV+TC R+Q  +N+ + +W SKGFKV 
Sbjct: 2   AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 61

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
            SVCDLS   +R++L+ TV++ F GKLNILVNNA +V+ K A +YT+E+YS +MS N E+
Sbjct: 62  ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEA 121

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           +YHL  LAHP LKAS   ++VF+SSV+GA+++P  + Y A+KGA++QLT+ LA EWA D+
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 181

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           IRVN V P  + T +    + D   +E +  LI +  L R  EP E++ +VAFLC PAAS
Sbjct: 182 IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAAS 241

Query: 250 YITGQVISIDGGYTA 264
           Y+TGQ+I +DGG  A
Sbjct: 242 YVTGQIIYVDGGLMA 256

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  360 bits (927), Expect = e-127
 Identities = 145/267 (54%), Positives = 192/267 (71%), Gaps = 11/267 (4%)

Query: 1   MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ 60
           MA A +     ++WSL+  T LVTGGT+GIG+AIVEE A FGA +HTC R++  +NE + 
Sbjct: 1   MAGAEQ----SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLS 56

Query: 61  EWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEY 120
           +W+ KGF+VTGSVCD S   +REKL++TVSS+F GKL+IL+NN   +  K   +YT E++
Sbjct: 57  KWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDF 116

Query: 121 SSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
           S  +STN+ES+YHL QLAHPLLKASG  +I+FMSS+AG +S    S Y+A+KGA+NQL +
Sbjct: 117 SFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLAR 176

Query: 181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISP 238
           NLACEWA+D IR NAV+P  + T      L + +  +  K  +I++ PL R  EP E+S 
Sbjct: 177 NLACEWASDGIRANAVAPAVIAT-----PLAEAVYDDEFKKVVISRKPLGRFGEPEEVSS 231

Query: 239 LVAFLCLPAASYITGQVISIDGGYTAG 265
           LVAFLC+PAASYITGQ I +DGG T  
Sbjct: 232 LVAFLCMPAASYITGQTICVDGGLTVN 258

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  245 bits (629), Expect = 6e-82
 Identities = 81/255 (31%), Positives = 131/255 (51%), Gaps = 4/255 (1%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           +++  L    ALVT  T GIG AI   LA+ GA V    R Q  ++  +   + +G  VT
Sbjct: 7   ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVT 66

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVE 129
           G+VC +   + RE+L+    ++  G ++ILV+NAA+        + T E +  ++  NV+
Sbjct: 67  GTVCHVGKAEDRERLVAMAVNLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVK 125

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           ++  + +   P ++  G  S++ +SSV      P L  Y  SK A+  LTKNLA E A  
Sbjct: 126 ATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 185

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           +IRVN ++P  + T  S     D   +E   +     + R   P + + +V+FLC   AS
Sbjct: 186 NIRVNCLAPGLIKTNFSQVLWMDKARKE--YMKESLRIRRLGNPEDCAGIVSFLCSEDAS 243

Query: 250 YITGQVISIDGGYTA 264
           YITG+ + + GG  +
Sbjct: 244 YITGETVVVGGGTAS 258

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  236 bits (604), Expect = 6e-78
 Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 7/261 (2%)

Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE---RIQEWESKG 66
           G  + S +  T LVTGG  GIG  +   L   GASV   GR+ + +      ++   + G
Sbjct: 3   GSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANG 62

Query: 67  FKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMS 125
             +     D++  D+  + ++ V++   G+L+ +V+ A     +   T+   E +   + 
Sbjct: 63  GAIRYEPTDITNEDETARAVDAVTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVD 121

Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            NV  + ++ + A   +   G  S V +SS+A + +     AY  +K A++ L +  A E
Sbjct: 122 LNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADE 181

Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
                +RVN++ P  + T +         +         TPL R  E  +++ +  FL  
Sbjct: 182 LGASWVRVNSIRPGLIRTDLVAAITESAELSS--DYAMCTPLPRQGEVEDVANMAMFLLS 239

Query: 246 PAASYITGQVISIDGGYTAGN 266
            AAS++TGQVI++DGG     
Sbjct: 240 DAASFVTGQVINVDGGQMLRR 260

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  233 bits (597), Expect = 3e-77
 Identities = 78/253 (30%), Positives = 119/253 (47%), Gaps = 12/253 (4%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           K +  G+ ALVTG  +GIG   V+ L   GA V    R        +     +   +   
Sbjct: 2   KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN----SDLVSLAKECPGIEPV 57

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             DL   D  EK +  +     G +++LVNNAALV+M+   E T E +    S N+ S +
Sbjct: 58  CVDLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 112

Query: 133 HLCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
            + Q+    +   G   SIV +SS+   ++ P L  Y+++KGA+  LTK +A E     I
Sbjct: 113 QVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 172

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RVN+V+P  V T +      D       KL  + PL + AE  ++   + FL    ++  
Sbjct: 173 RVNSVNPTVVLTDMGKKVSADPEFAR--KLKERHPLRKFAEVEDVVNSILFLLSDRSAST 230

Query: 252 TGQVISIDGGYTA 264
           +G  I +D GY A
Sbjct: 231 SGGGILVDAGYLA 243

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  232 bits (595), Expect = 5e-77
 Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 12/251 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G   LVTG  +GIG   V+ L   GA V    R Q      +     +   +     
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ----ADLDSLVRECPGIEPVCV 59

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL   +  E+ + +V     G +++LVNNAA+ +++   E T E +      N+ +   +
Sbjct: 60  DLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114

Query: 135 CQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            Q+    L A G   +IV +SS     ++   S Y ++KGA++ LTK +A E     IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NAV+P  V T +     +D    +   ++ + PL + AE   +   + FL    +   TG
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAK--TMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG 232

Query: 254 QVISIDGGYTA 264
             + ++GG+ A
Sbjct: 233 STLPVEGGFWA 243

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  233 bits (597), Expect = 5e-77
 Identities = 80/253 (31%), Positives = 119/253 (47%), Gaps = 5/253 (1%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-WESKGFKVTGSV 73
            L G  AL+TG T+GIG  I    A  GA +   GRD + ++   +   E  G  V    
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DL+  D   +L    +  F G L++LVNNA +   +   +   + + + ++ N+ +   
Sbjct: 77  IDLAEPDAPAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPAL 135

Query: 134 LCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           L       + A+G   +I+ ++S A    +P   AY  SK  +   TK LA E     IR
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            N+V P  V T++      D        +IA+ PL R A P+E+S  V +L   AAS I 
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSA--PMIARIPLGRFAVPHEVSDAVVWLASDAASMIN 253

Query: 253 GQVISIDGGYTAG 265
           G  I +DGGYT G
Sbjct: 254 GVDIPVDGGYTMG 266

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  232 bits (594), Expect = 1e-76
 Identities = 73/253 (28%), Positives = 131/253 (51%), Gaps = 6/253 (2%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L    A+VTGG + IG A V  LA  GA V     D+ M  + +++   +G  V+  V 
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK-RATEYTLEEYSSVMSTNVESSYH 133
           D++  +  +  + +V     G+++ILV  A + + + +A + T  ++   +  N+   + 
Sbjct: 70  DVTNTESVQNAVRSVHEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFR 128

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAI--SIPRLSAYAASKGAINQLTKNLACEWATDSI 191
            CQ    ++       IV + S++G I     + +AY ASK  ++Q  ++LA EWA   I
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGI 188

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           R NAV+P  + T ++   +    + +    IA TP+ R  +P+E++ +V FL   AAS +
Sbjct: 189 RANAVAPTYIETTLTRFGMEKPELYD--AWIAGTPMGRVGQPDEVASVVQFLASDAASLM 246

Query: 252 TGQVISIDGGYTA 264
           TG ++++D G+T 
Sbjct: 247 TGAIVNVDAGFTV 259

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  228 bits (585), Expect = 2e-75
 Identities = 80/257 (31%), Positives = 117/257 (45%), Gaps = 21/257 (8%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S      LVTGG++GIG A+VE L +             +IN  IQ+       +     
Sbjct: 1   SNAMANYLVTGGSKGIGKAVVELLLQNKNHT--------VINIDIQQ-SFSAENLKFIKA 51

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL+       +++ +        + +  NA +++     +  +E    V+  NV SS + 
Sbjct: 52  DLTKQQDITNVLDII--KN-VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYF 108

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +     LK     SIVF  S    I+ P   AY  SKGAI Q+TK+LA + A   IRVN
Sbjct: 109 IKGLENNLKVGA--SIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVN 166

Query: 195 AVSPWAVNTQI------SPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPA 247
            V P  V+T +         +   +   E  K    + PL R A+P EI+ LV FL    
Sbjct: 167 TVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK 226

Query: 248 ASYITGQVISIDGGYTA 264
           + ++TG +I IDGGYTA
Sbjct: 227 SKFMTGGLIPIDGGYTA 243

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  229 bits (586), Expect = 2e-75
 Identities = 74/250 (29%), Positives = 127/250 (50%), Gaps = 5/250 (2%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G  A++TG   GIG  I    A  GASV     + +  N  + E +  G +     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++   +   L +   S   GK++ILVNNA      +  +  + ++      NV S +HL
Sbjct: 68  DITSEQELSALADFAISKL-GKVDILVNNAG-GGGPKPFDMPMADFRRAYELNVFSFFHL 125

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            QL  P ++ +G   I+ ++S+A       +++YA+SK A + L +N+A +    +IRVN
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
            ++P A+ T      +   + Q   K++  TP+ R  +P +I+    FLC PAAS+++GQ
Sbjct: 186 GIAPGAILTDALKSVITPEIEQ---KMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQ 242

Query: 255 VISIDGGYTA 264
           ++++ GG   
Sbjct: 243 ILTVSGGGVQ 252

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  226 bits (580), Expect = 1e-74
 Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 10/254 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G TALVTG  RG+G+A  E LA  GA V        ++ E +     KG+   G   
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++     E     + +     ++IL+NNA +   K   E  LE +  V+ TN+ S++ +
Sbjct: 66  DVTDELAIEAAFSKLDAEG-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLV 124

Query: 135 CQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A   + A  +   I+ + S+    + P ++ Y A+KG I  LT ++A EWA  +I+ 
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184

Query: 194 NAVSPWAVNTQISPPDLNDLLV--QEYVKLI-AKTPLARSAEPNEISPLVAFLCLPAASY 250
           NA+ P  + T     D+N  L+  +++   + + TP  R   P E+     FL   A+ Y
Sbjct: 185 NAIGPGYILT-----DMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDY 239

Query: 251 ITGQVISIDGGYTA 264
           I GQ+I +DGG+ A
Sbjct: 240 INGQIIYVDGGWLA 253

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  226 bits (578), Expect = 5e-74
 Identities = 81/253 (32%), Positives = 122/253 (48%), Gaps = 9/253 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G  AL+TG + GIG  +    A  GA V    R  + +     E    G K     C
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  DQ   +++ ++    G ++I V NA +V ++   +  LEE+  +  TNV   +  
Sbjct: 89  DVTQPDQVRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLT 147

Query: 135 CQLAHPLLKASGNA-SIVFMSSVAGAISIP--RLSAYAASKGAINQLTKNLACEWATDSI 191
            Q A   +   G   +I+  +S++G I     ++S Y  SK A+  LTK +A E A   I
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RVN+VSP  + T     +L + L   +     K PL R   P E++ L  +L   A+SY+
Sbjct: 208 RVNSVSPGYIRT-----ELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYM 262

Query: 252 TGQVISIDGGYTA 264
           TG  I IDGGYT 
Sbjct: 263 TGSDIVIDGGYTC 275

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  225 bits (577), Expect = 6e-74
 Identities = 94/252 (37%), Positives = 145/252 (57%), Gaps = 5/252 (1%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGSV 73
            LRG  ALVTGG+RG+G+ I + LA  G SV    R+    +E  Q+  E  G +     
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CD+S  ++ +KL+E V   F GKL+ +VN A +     A E+ L+E+  V+  N+  +Y+
Sbjct: 78  CDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYY 136

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           +C+ A  LL+ S N SI+ + S+     ++P +SAYAASKG +  LTK LA EW    IR
Sbjct: 137 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 196

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           VN ++P    T+++    +D    +Y  ++ + PL R+  P ++  +  FL    A Y+T
Sbjct: 197 VNVIAPGWYRTKMTEAVFSDPEKLDY--MLKRIPLGRTGVPEDLKGVAVFLASEEAKYVT 254

Query: 253 GQVISIDGGYTA 264
           GQ+I +DGG+TA
Sbjct: 255 GQIIFVDGGWTA 266

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  223 bits (570), Expect = 8e-73
 Identities = 82/253 (32%), Positives = 129/253 (50%), Gaps = 11/253 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL G TA+VTG   GIG AI    AR GA V   GR   +  E   E    G      V 
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAVVA 86

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL+  +    + E +++    ++++LVNNA ++    A E +L  +  V++ N+++++ L
Sbjct: 87  DLADLEGAANVAEELAA--TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVL 144

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +     + A G+  IV ++S+        ++AYAASK A+  LT+ LA EWA   + VN
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVN 204

Query: 195 AVSPWAVNTQISPPDLNDLLVQE---YVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           A++P  V T          L  +     ++ A+ P  R A P ++     FL   AASY+
Sbjct: 205 ALAPGYVVT-----ANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYV 259

Query: 252 TGQVISIDGGYTA 264
            GQV+++DGG+ A
Sbjct: 260 HGQVLAVDGGWLA 272

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  223 bits (570), Expect = 1e-72
 Identities = 74/253 (29%), Positives = 110/253 (43%), Gaps = 3/253 (1%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A+VTG + GIG A     AR GA V    R+ N + E   E    G +      D
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHL 134
           +      E L+E     F G L+   NNA  +  M   +  ++E +   + TN+ S++  
Sbjct: 66  VGDEALHEALVELAVRRF-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLA 124

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            +   P + A G  S+ F SS  G       ++ YAASK  +  L + LA E     IRV
Sbjct: 125 AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRV 184

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NA+ P   +T  +  +L     +    +     L R A P EI+    +L    AS++TG
Sbjct: 185 NALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTG 244

Query: 254 QVISIDGGYTAGN 266
             +  DGG +   
Sbjct: 245 AALLADGGASVTK 257

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  222 bits (568), Expect = 1e-72
 Identities = 54/258 (20%), Positives = 102/258 (39%), Gaps = 10/258 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L     +++G    +G  +    A  GA +    R    + +  ++    G +      D
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHL 134
           ++   Q   L++     + G++++++NNA  V  MK     T E     +   V  +  L
Sbjct: 69  ITDDAQVAHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q   P L+ S   ++V ++S+    S  +  AY  +K A+  +++ LA E     IRVN
Sbjct: 128 IQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYV-------KLIAKTPLARSAEPNEISPLVAFLCLPA 247
           +V P  +              +             A + L R    +E++  + F+    
Sbjct: 187 SVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL 246

Query: 248 ASYITGQVISIDGGYTAG 265
           AS ITGQ + ++ G    
Sbjct: 247 ASGITGQALDVNCGEYKA 264

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  222 bits (568), Expect = 1e-72
 Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 7/253 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A+VTG   GIG A+   LA  G  V     D +  +    +    G        D
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVD 83

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S   Q   +++   + F G ++ LV NA +V +    + T+E++  V++ N+  ++   
Sbjct: 84  VSDEQQIIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCT 142

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A P +   G  +IV +SS+AG +++    AY  SK  I QL++  A E  +  IR N 
Sbjct: 143 KHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNT 202

Query: 196 VSPWAVNTQI---SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           + P  V+T +   +    +  L     + +      R A P E++ +V FL    AS IT
Sbjct: 203 LLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMIT 262

Query: 253 GQVISIDGGYTAG 265
           G     DGG  A 
Sbjct: 263 GTTQIADGGTIAA 275

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  222 bits (568), Expect = 2e-72
 Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 6/253 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L     +VTGG  GIG A  E  A+ GA V     +++       E    G K  G   D
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGSKAFGVRVD 81

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S     E ++E  ++ + G++++LVNNA             E +  +MS NV+  +   
Sbjct: 82  VSSAKDAESMVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCS 140

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P+++ +G  SI+  +S     +I   +AY ASKGAI+ LT+ +A + A + IRVNA
Sbjct: 141 KYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNA 200

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           V+P  +++        +      ++    A+  + R     EI+  + FL    + + TG
Sbjct: 201 VAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATG 260

Query: 254 QVISIDGGYTAGN 266
            ++++DGG + GN
Sbjct: 261 SILTVDGGSSIGN 273

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  221 bits (566), Expect = 2e-72
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 11/259 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE--WESKGFKVTGS 72
            L    A+VTGG+ GIG A VE L   GA+V  C RD   +            G ++  S
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           VCD+    Q     E       G  +ILVNNA    +    E T E +S  +     S  
Sbjct: 65  VCDVLDALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVI 123

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           H  +   P L++  +A+IV ++S+  +   P + A +A++  +  L +++A E+A   +R
Sbjct: 124 HPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVR 183

Query: 193 VNAVSPWAVNT--------QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
           VN +    V +             +L+       +    + PL R  +P E +  + FL 
Sbjct: 184 VNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLA 243

Query: 245 LPAASYITGQVISIDGGYT 263
            P ++Y TG  I + GG +
Sbjct: 244 SPLSAYTTGSHIDVSGGLS 262

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  221 bits (565), Expect = 2e-72
 Identities = 80/250 (32%), Positives = 127/250 (50%), Gaps = 5/250 (2%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L    A+VTG   GIG AI    A+ GASV                    G K  G  C
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           +++    RE +I+     F GK+ +LVNNA      +  +  + ++      N+ S + L
Sbjct: 69  NVTDEQHREAVIKAALDQF-GKITVLVNNAG-GGGPKPFDMPMSDFEWAFKLNLFSLFRL 126

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            QLA P ++ +G  +I+ +SS+AG  +  R+++Y +SK A+N LT+N+A +     IRVN
Sbjct: 127 SQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVN 186

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           A++P A+ T      L   + +    ++  TPL R  E  +I+    FLC PAA++I+GQ
Sbjct: 187 AIAPGAIKTDALATVLTPEIER---AMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQ 243

Query: 255 VISIDGGYTA 264
           V+++ GG   
Sbjct: 244 VLTVSGGGVQ 253

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  220 bits (564), Expect = 3e-72
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 14/255 (5%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G  A VTG   GIG  I    A  GA +    R+   ++   QE           V 
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE--LGAAVAARIVA 65

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  +          +V    ++ILVN+A +  +  A E     +  VM+ NV+  +  
Sbjct: 66  DVTDAEAMTAAAAEAEAV--APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWA 123

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIP--RLSAYAASKGAINQLTKNLACEWATDSIR 192
            +     + A G  +IV + S++G I       S+Y ASKGA++QLT+ LA EWA   +R
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVR 183

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQE---YVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
           VNA++P  V T     ++   + +    +   +  TP+ R  EP+EI+    FL  PAAS
Sbjct: 184 VNALAPGYVAT-----EMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAAS 238

Query: 250 YITGQVISIDGGYTA 264
           Y+TG ++++DGGYT 
Sbjct: 239 YVTGAILAVDGGYTV 253

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  221 bits (565), Expect = 4e-72
 Identities = 72/252 (28%), Positives = 110/252 (43%), Gaps = 9/252 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L    A++TG T GIG A  +     GA V   GR +++++  I E    G    G   D
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---IGGGAVGIQAD 83

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
            +   + ++L E V +   G++++L  NA    M    E T E+Y      NV+      
Sbjct: 84  SANLAELDRLYEKVKAEA-GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTV 142

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           Q A PLL      S+V   S AG+   P  S YAASK A+    +N   +     IR+N 
Sbjct: 143 QKALPLLARGS--SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINT 200

Query: 196 VSPWAVNTQI--SPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           +SP    T         + +  Q  +  L A+ P+ R     E++    FL    +S++T
Sbjct: 201 LSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVT 260

Query: 253 GQVISIDGGYTA 264
           G  + +DGG   
Sbjct: 261 GAELFVDGGSAQ 272

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  220 bits (563), Expect = 6e-72
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 15/253 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G  ALVTG   GIG A+V  L   GA V    R             +          D
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRA-----------VAGIAADLHLPGD 74

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           L      + L   V++   G+L+I+VNNA ++   R TE T  ++S  +  NVE+ + +C
Sbjct: 75  LREAAYADGLPGAVAAGL-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRIC 133

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A PL+ A+G  +IV ++S  G    P  + Y  +K A+  LT+ +  + A   IR+NA
Sbjct: 134 RAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINA 193

Query: 196 VSPWAVNTQISPPDLNDLLV---QEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           V P  VNT +             +   +L    PL R AEP +I+ +V FL   AA Y+ 
Sbjct: 194 VCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLC 253

Query: 253 GQVISIDGGYTAG 265
           G ++ ++GG    
Sbjct: 254 GSLVEVNGGKAVA 266

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  220 bits (564), Expect = 7e-72
 Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 12/254 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+G  A VTG + GIG+A+ E  A+ GA V           +     ++ G       C
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNVESSY 132
           ++S     E+ I      F G +++ V NA +   +         + ++ ++S ++   Y
Sbjct: 91  NISDPKSVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVY 149

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAIS-IPRL-SAYAASKGAINQLTKNLACEWATDS 190
           +       + K +G  S++  SS++G I  IP+L + Y  +K A   L K+LA EWA   
Sbjct: 150 YCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWA-PF 208

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLI-AKTPLARSAEPNEISPLVAFLCLPAAS 249
            RVN +SP  ++T     D+ D   ++        TPL R     E+     +L   A++
Sbjct: 209 ARVNTISPGYIDT-----DITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNAST 263

Query: 250 YITGQVISIDGGYT 263
           + TG  + IDGGYT
Sbjct: 264 FTTGSDVVIDGGYT 277

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  219 bits (561), Expect = 8e-72
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 2/251 (0%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+    +VTG   GIG AI ++ A   + V      ++ +N+ +QE    G +V G   
Sbjct: 4   SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYH 133
           D+S     E+ +      +  ++++L NNA ++  +    E + E +  V++ N+ S+++
Sbjct: 64  DVSKKKDVEEFVRRTFETY-SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
             +   P++   G   IV  +S+AG       + Y  +K  +  LT+++A  +    IR 
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
            AV P  V T I         +         +  +R AEP +I+ ++ FL    AS++ G
Sbjct: 183 VAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNG 242

Query: 254 QVISIDGGYTA 264
             + +DGG T 
Sbjct: 243 DAVVVDGGLTV 253

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  219 bits (560), Expect = 1e-71
 Identities = 84/252 (33%), Positives = 123/252 (48%), Gaps = 9/252 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G   LVTGG RGIG AI +  AR GA V  C        E  +      F+      D
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGAFFQ-----VD 57

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           L    +R + +E  +    G++++LVNNAA+     A    L E+  V+  N+ +  HL 
Sbjct: 58  LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
            LA   ++  G  +IV ++SV G  +    +AY ASKG +  LT++LA + A   IRVNA
Sbjct: 117 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           V+P A+ T+     +      E  +        L R  +P E++  V FL    AS+ITG
Sbjct: 177 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 236

Query: 254 QVISIDGGYTAG 265
            ++ +DGG TA 
Sbjct: 237 AILPVDGGMTAS 248

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  220 bits (562), Expect = 2e-71
 Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 14/261 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK---VTGS 72
             G + ++TG + GIG +     A+ GA V   GR+++ + E  Q+    G     +   
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRA--TEYTLEEYSSVMSTNVES 130
           V D++    ++ +I T  + F GK++ILVNNA   +      T+  +E Y      N ++
Sbjct: 84  VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142

Query: 131 SYHLCQLAHPLLKASGNASIVFMSS-VAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
              + Q     L  +    IV +SS VAG  +      YA +K A++Q T+  A +    
Sbjct: 143 VIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201

Query: 190 SIRVNAVSPWAVNTQI-----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
            +RVN+VSP AV T        P   +D L           P+    +P EI+ ++ FL 
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 261

Query: 245 -LPAASYITGQVISIDGGYTA 264
               +SYI GQ I  DGG T 
Sbjct: 262 DRNLSSYIIGQSIVADGGSTL 282

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  217 bits (556), Expect = 6e-71
 Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 10/260 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSV 73
            + G  A++TG + GIG AI E  A+ GA +    R  + ++E  +  + K G +V    
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D++  +  + ++E+V S F G  +ILVNNA     +   E   E++       V ++  
Sbjct: 64  VDVATPEGVDAVVESVRSSF-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVR 122

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L +   P ++A G  +I+  +S+     +     Y  +K A+   +K LA E   D+IRV
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRV 182

Query: 194 NAVSPWAVNTQI------SPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCL 245
           N ++P  + T             N    + Y++       P+ R A P E++    FLC 
Sbjct: 183 NCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCS 242

Query: 246 PAASYITGQVISIDGGYTAG 265
             A+Y  G    +DGG    
Sbjct: 243 ERATYSVGSAYFVDGGMLKT 262

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  217 bits (556), Expect = 2e-70
 Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 4/252 (1%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSV 73
           S +G  A +TGG  G+G  +   L+  GA      R  +++    ++  S+ G KV    
Sbjct: 23  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CD+   D  +  +  +  V  G  NI++NNAA   +      +   + ++    +  +  
Sbjct: 83  CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 141

Query: 134 LCQ-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           +   +   L+KA   A+ + ++++        +   A++K  +  ++K+LA EW    +R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 201

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            N + P  + T+ +     D       ++I + P  R     E++ L AFLC   AS+I 
Sbjct: 202 FNVIQPGPIKTKGA-FSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWIN 260

Query: 253 GQVISIDGGYTA 264
           G VI  DGG   
Sbjct: 261 GAVIKFDGGEEV 272

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  216 bits (552), Expect = 2e-70
 Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 9/252 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G T ++TGG RG+G     +    GA V              +E    G        D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE---LGDAARYQHLD 59

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  +  ++++      F G ++ LVNNA +         ++E +  V+  N+   +   
Sbjct: 60  VTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P +K +G  SIV +SS AG + +   S+Y ASK  +  L+K  A E  TD IRVN+
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSA-EPNEISPLVAFLCLPAASYITGQ 254
           V P    T +      +  +++       TP+ R   EP EI+  V  L    +SY+TG 
Sbjct: 179 VHPGMTYTPM----TAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGA 234

Query: 255 VISIDGGYTAGN 266
            +++DGG+T G 
Sbjct: 235 ELAVDGGWTTGP 246

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  216 bits (552), Expect = 2e-70
 Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 9/252 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
            +G  A+V GGT G+G A V  L   GA V   GR+++ I    +E    G +V     D
Sbjct: 6   YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE---FGPRVHALRSD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  ++   L         G +++L  NA +  ++   + +   Y    + N + ++   
Sbjct: 63  IADLNEIAVLGAAAGQTL-GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           Q   PL++  G  SIVF SSVA     P +S Y+ASK A+      LA E     IRVN+
Sbjct: 122 QRLTPLIREGG--SIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNS 179

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           VSP  ++T            +   K      TP+ R+   +E++  V FL    A++ TG
Sbjct: 180 VSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTG 238

Query: 254 QVISIDGGYTAG 265
             +++DGG    
Sbjct: 239 AKLAVDGGLGQK 250

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  217 bits (554), Expect = 2e-70
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 16/263 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE---RIQEWESKGFKVTGS 72
                A++TG + GIG A     AR GA V   GR    + E   +I         V   
Sbjct: 4   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNA----ALVVMKRATEYTLEEYSSVMSTNV 128
           V D++    +++++ T    F GKL+ILVNNA         K  T  ++E Y + ++ N+
Sbjct: 64  VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWA 187
            S   L + A P L ++    IV +SS+A  + + P    Y+ +K AI+Q T+N A +  
Sbjct: 123 RSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181

Query: 188 TDSIRVNAVSPWAVNTQI-----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
              IRVN++SP  V T        P + +         +    P     +P +I+ ++AF
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 241

Query: 243 LCL-PAASYITGQVISIDGGYTA 264
           L     +SYI G  + +DGG + 
Sbjct: 242 LADRKTSSYIIGHQLVVDGGSSL 264

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  215 bits (551), Expect = 2e-70
 Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 8/252 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A++TGGT GIG AI  +    GA V   GR  ++  +  +   +   ++     D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
            S  D   KL +     F G ++ LVNNA + V K   E T  E+  +++ N++  +   
Sbjct: 63  SSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 136 QLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT--DSIR 192
           +L    +K  G  ASI+ MSS+ G +  P L AY ASKGA+  ++K+ A + A     +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           VN V P  + T +          +E +    KTP+    EPN+I+ +  +L    + + T
Sbjct: 182 VNTVHPGYIKTPLVDDLPGA---EEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFAT 238

Query: 253 GQVISIDGGYTA 264
           G    +DGGYTA
Sbjct: 239 GSEFVVDGGYTA 250

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  216 bits (552), Expect = 2e-70
 Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 8/253 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +++    ++TGG+ G+G  +    A+ GA V   GR +  + E   E E    ++     
Sbjct: 3   AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQM 62

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+   D  +K+IE +   F G+++IL+NNAA   +  A + ++  ++SV++  +  +++ 
Sbjct: 63  DVRNTDDIQKMIEQIDEKF-GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYC 121

Query: 135 CQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS-IR 192
            Q      ++     +I+ M +     + P +   AA+K  +  +TK LA EW     IR
Sbjct: 122 SQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIR 181

Query: 193 VNAVSPWAVNTQI--SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           VNA++P  +          +++ + +  ++ +   PL R   P EI+ L  +LC   A+Y
Sbjct: 182 VNAIAPGPIERTGGADKLWISEEMAKRTIQSV---PLGRLGTPEEIAGLAYYLCSDEAAY 238

Query: 251 ITGQVISIDGGYT 263
           I G  +++DGG  
Sbjct: 239 INGTCMTMDGGQH 251

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  215 bits (551), Expect = 4e-70
 Identities = 86/260 (33%), Positives = 126/260 (48%), Gaps = 16/260 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-WESKGFKVTGSV 73
           S    T +VTGG RGIG A    +A  GA+V    R      E  ++  +  G K     
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CD+S  D   K I+ + +   G ++ L+ NA + V+K ATE T E+++ V   NV   ++
Sbjct: 71  CDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 129

Query: 134 LCQ-LAHPLLKASGNASIVFMSSVAGAI-SIPRLS------AYAASKGAINQLTKNLACE 185
            C+ +A   L+     SIV  SS++  I +   L+       Y +SK A + L K LA E
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 189

Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLC 244
           WA+  IRVNA+SP  VNT     D    + ++      +  PL R A+P E++     L 
Sbjct: 190 WASAGIRVNALSPGYVNT-----DQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLL 244

Query: 245 LPAASYITGQVISIDGGYTA 264
              A+Y+TG    IDGG   
Sbjct: 245 SDHATYMTGGEYFIDGGQLI 264

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  216 bits (552), Expect = 5e-70
 Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 16/263 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF---KVTGS 72
               T ++TG + GIG       A+ GA+V   GR    + E  Q     G    +V   
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSVMSTNV 128
           V D++  D ++++I +    F GK+++LVNNA            T+  ++ Y   +  N+
Sbjct: 64  VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSS-VAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           ++   + +   P L AS    IV +SS VAG  + P    YA +K A++Q T++ A + A
Sbjct: 123 QAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 181

Query: 188 TDSIRVNAVSPWAVNTQI-----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
              IRVN+VSP  V T        P   +              P+  + +P  I+ ++ F
Sbjct: 182 KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF 241

Query: 243 LCLPAAS-YITGQVISIDGGYTA 264
           L     S YI GQ I  DGG + 
Sbjct: 242 LADRNLSFYILGQSIVADGGTSL 264

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  215 bits (549), Expect = 5e-70
 Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 7/251 (2%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-WESKGFKVTGSVCDL 76
              A+VTG + G G AI       G  V         + E  +  W +   KV     D+
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT---EYTLEEYSSVMSTNVESSYH 133
           +        I      F G +++LVNNA +     A       +E++  VM+ NV   + 
Sbjct: 62  ADEGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            C+   P +   G   IV ++SVA  ++ P  SAY  SKGA+ QLTK++A ++A   IR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NAV P  + T ++   L+   +++  +++A+ P        +++  V FL    A+Y+ G
Sbjct: 181 NAVCPGMIETPMTQWRLDQPELRD--QVLARIPQKEIGTAAQVADAVMFLAGEDATYVNG 238

Query: 254 QVISIDGGYTA 264
             + +DG YTA
Sbjct: 239 AALVMDGAYTA 249

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  215 bits (550), Expect = 5e-70
 Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 20/256 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           LR    +VTG + GIG AI E     G+ V                 +    K     CD
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH-----------DPGEAKYDHIECD 54

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  DQ +  I+ +   + G +++LVNNA +    +    ++ E+  ++  N+   Y+  
Sbjct: 55  VTNPDQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYAS 113

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A P +  S + SIV +SSV  +I     SAY  SK A+  LTK++A ++A   +R NA
Sbjct: 114 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYA-PLLRCNA 172

Query: 196 VSPWAVNTQI-------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  ++T +               + ++  +   + P+ R  +P E++  VAFL    A
Sbjct: 173 VCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREA 232

Query: 249 SYITGQVISIDGGYTA 264
           S+ITG  + +DGG + 
Sbjct: 233 SFITGTCLYVDGGLSI 248

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  215 bits (550), Expect = 6e-70
 Identities = 75/253 (29%), Positives = 112/253 (44%), Gaps = 9/253 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L    A++TG   GIG      LAR GA V      +  +          G      V D
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS---VGRGAVHHVVD 65

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMK--RATEYTLEEYSSVMSTNVESSYH 133
           L+       LI+     F G+L+I+ NNAA         T+ T++ +    + N   +  
Sbjct: 66  LTNEVSVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           +C+ A P L ++G  +IV +SS     +    +AYA +K AI  LT+ +A ++    +R 
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NA++P  V T      L   +V             R  EP+EI+ LV FL    A++ITG
Sbjct: 185 NAIAPGLVRTPRLEVGLPQPIVDI---FATHHLAGRIGEPHEIAELVCFLASDRAAFITG 241

Query: 254 QVISIDGGYTAGN 266
           QVI+ D G  A  
Sbjct: 242 QVIAADSGLLAHL 254

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  215 bits (551), Expect = 7e-70
 Identities = 83/254 (32%), Positives = 121/254 (47%), Gaps = 9/254 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL G  ALVTGG+RGIG  I + L   GA V  C RD     +      + G        
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPA 84

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DLS      +L + +  +   +L+ILVNNA          Y +  +  VM  NV S +  
Sbjct: 85  DLSSEAGARRLAQALGELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSC 143

Query: 135 CQLAHPLLKASGN----ASIVFMSSVAGAISIP-RLSAYAASKGAINQLTKNLACEWATD 189
            Q   PLL+ S +    A ++ + SVAG  ++  +  AY  SK A++QL++ LA E   +
Sbjct: 144 IQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGE 203

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            I VN ++P    ++++    ND    E     A  P+ R   P E++ L   L   A +
Sbjct: 204 HINVNVIAPGRFPSRMTRHIANDPQALE--ADSASIPMGRWGRPEEMAALAISLAGTAGA 261

Query: 250 YITGQVISIDGGYT 263
           Y+TG VI IDGG+ 
Sbjct: 262 YMTGNVIPIDGGFH 275

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  215 bits (549), Expect = 1e-69
 Identities = 68/257 (26%), Positives = 129/257 (50%), Gaps = 19/257 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
                A+VTGG+ GIG A+V+ L R+GA V +   D+         ++           D
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  ++ ++ +E  +  + G+++ILVNNA +           E +  ++  NV  SY + 
Sbjct: 62  VTNEEEVKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMA 120

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P++ A G+ SI+ ++SV    +    +AY  SK A+  LT+++A ++A   IR NA
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA-PKIRCNA 179

Query: 196 VSPWAVNT-------QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  + T       ++   +  + + ++  +   + P+ R   P E++ +VAFL    +
Sbjct: 180 VCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRS 239

Query: 249 SYITGQVISIDGGYTAG 265
           S+ITG  +++DGG  + 
Sbjct: 240 SFITGACLTVDGGLLSK 256

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  214 bits (547), Expect = 1e-69
 Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 13/251 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  ALV+GG RG+G + V  +   GA V               E             D
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++   Q +  ++T  + F G L++LVNNA ++ +    +Y L E+  ++  N+   +   
Sbjct: 62  VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +     +K +G  SI+ +SS+ G         Y A+K A+  LTK+ A E     IRVN+
Sbjct: 121 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           + P  V T          +     + I +T L R+AEP E+S LV +L    +SY TG  
Sbjct: 181 IHPGLVKTP---------MTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAE 231

Query: 256 ISIDGGYTAGN 266
             +DGG  AG 
Sbjct: 232 FVVDGGTVAGL 242

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  213 bits (546), Expect = 2e-69
 Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 14/259 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G   LVTG    IG A    LA  G ++     ++  + +       KG +    VCD
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHL 134
           ++  +     +++V   F GK++ L NNA          +Y  ++++ V++ NV  ++H+
Sbjct: 65  VTSEEAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 123

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +     +       IV  +S+AG    P ++AY  SKGAI  LT+  A + A  +IRVN
Sbjct: 124 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 183

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYV------------KLIAKTPLARSAEPNEISPLVAF 242
           A+SP  +          +L  +               ++I   P+ R  + NEI  +VAF
Sbjct: 184 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 243

Query: 243 LCLPAASYITGQVISIDGG 261
           L    +S++TG  + I GG
Sbjct: 244 LLGDDSSFMTGVNLPIAGG 262

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  214 bits (548), Expect = 2e-69
 Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 9/258 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +     AL+TG   GIG A    LA  G +V   GR +  + E   E    G +      
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYH 133
           D+S   Q    +  +   F G L+I+V NA +  V     +    E+   ++ N+  ++ 
Sbjct: 85  DVSDELQMRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFL 143

Query: 134 LCQLAHPLLKASGNASIVFMSSVAG--AISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
              L  P LK  G  +IV +SS+ G    + P  +AY A+K A   + + LA E     I
Sbjct: 144 TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203

Query: 192 RVNAVSPWAVNTQI-----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
           RVNAV P A+ T I        +    +  E+ K        +     +++ L+ FL   
Sbjct: 204 RVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSE 263

Query: 247 AASYITGQVISIDGGYTA 264
            A ++TG  + IDGG   
Sbjct: 264 RARHVTGSPVWIDGGQGL 281

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  213 bits (544), Expect = 4e-69
 Identities = 71/257 (27%), Positives = 111/257 (43%), Gaps = 8/257 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF--KVTGSV 73
                 L+TGG  G+G A    LA  GA +         +              +V  +V
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVESSY 132
            D+S   Q E  +   +  F G+++   NNA           +T  E+  V+S N+   +
Sbjct: 71  ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
              +    +++  G+  +V  +SV G   I   S YAA+K  +  LT+N A E+    IR
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVK----LIAKTPLARSAEPNEISPLVAFLCLPAA 248
           +NA++P A+ T +    +  L  +   K     I   P  R  E  EI+ +VAFL    A
Sbjct: 190 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 249

Query: 249 SYITGQVISIDGGYTAG 265
           SY+   V+ IDGG +A 
Sbjct: 250 SYVNATVVPIDGGQSAA 266

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  211 bits (541), Expect = 7e-69
 Identities = 85/250 (34%), Positives = 124/250 (49%), Gaps = 20/250 (8%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            ALVTGG+RGIG AI E L   G  V         I  R  E  ++         DL   
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRV--------AIASRNPEEAAQSLGAVPLPTDLEK- 54

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           D  + L++       G L++LV+ AA+ V K A E + EE+  V+  +++ ++ L Q A 
Sbjct: 55  DDPKGLVKRALEAL-GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113

Query: 140 PLLKASGNASIVFMSSVAG--AISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
           P +  +G   ++F+ SV    A     + AY  +K A+  LT+ LA EWA   IRVN + 
Sbjct: 114 PHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLC 173

Query: 198 PWAVNTQISPPDLNDLLVQE---YVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           P  V T     +    L Q    Y  + A+ P+ R A P EI+ + A LC   A Y+TGQ
Sbjct: 174 PGYVET-----EFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQ 228

Query: 255 VISIDGGYTA 264
            +++DGG+ A
Sbjct: 229 AVAVDGGFLA 238

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  212 bits (541), Expect = 2e-68
 Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 10/254 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G   +VTGG RGIG  IV      GA V  C +D+       +  E +       +CD
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE----SGGRALEQELPGAVFILCD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           ++  D  + L+      F G+L+ +VNNA      +R  E + + +  ++  N+  +Y L
Sbjct: 63  VTQEDDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +LA P L+ S   +++ +SS+ GAI   +   Y A+KGA+  +TK LA + +   +RVN
Sbjct: 122 TKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 180

Query: 195 AVSPWAVNTQI--SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            +SP  + T +      L         + +   PL R  +P E+     FL    A++ T
Sbjct: 181 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCT 239

Query: 253 GQVISIDGGYTAGN 266
           G  + + GG   G 
Sbjct: 240 GIELLVTGGAELGY 253

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  211 bits (539), Expect = 2e-68
 Identities = 63/255 (24%), Positives = 103/255 (40%), Gaps = 18/255 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV-C 74
           L     LVTG + GIG       AR+GA+V   GR++  + +       +  +       
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69

Query: 75  DLSFGD--QREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESS 131
           DL        ++L + ++  +  +L+ +++NA L+  +   +E   + +  VM  NV ++
Sbjct: 70  DLLTCTSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNAT 128

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           + L Q   PLL  S   S+VF SS  G        AYAASK A   + + LA E+    +
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQ-QRL 187

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RVN ++P    T +                       +   P +I PL  +L    +   
Sbjct: 188 RVNCINPGGTRTAMR------------ASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRK 235

Query: 252 TGQVISIDGGYTAGN 266
           TG       G   G 
Sbjct: 236 TGMTFDAQPGRKPGI 250

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  211 bits (539), Expect = 2e-68
 Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 5/250 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVC 74
           L G   ++TG + G+G ++    A   A V    R  ++  N  ++E +  G +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++       L+++    F GKL++++NNA L     + E +L +++ V+ TN+  ++  
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123

Query: 135 CQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A    ++     +++ MSSV   I  P    YAASKG +  +T+ LA E+A   IRV
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N + P A+NT I+     D   +    + +  P+    EP EI+ + A+L    ASY+TG
Sbjct: 184 NNIGPGAINTPINAEKFADPEQRA--DVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG 241

Query: 254 QVISIDGGYT 263
             +  DGG T
Sbjct: 242 ITLFADGGMT 251

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  210 bits (538), Expect = 3e-68
 Identities = 82/257 (31%), Positives = 121/257 (47%), Gaps = 10/257 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L+G TALVTG T GIG  I + LAR GA++   G         + E    G K      
Sbjct: 1   TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPA 58

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DLS   Q E L       F G ++ILVNNA +  +    ++ LE +  +++ N+ + +H 
Sbjct: 59  DLSDVAQIEALFALAEREF-GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHG 117

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +LA P ++A     I+ ++SV G +     +AY A+K  +  LTK +  E AT ++  N
Sbjct: 118 TRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCN 177

Query: 195 AVSPWAVNT-----QISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPA 247
           A+ P  V T     QI     N     +     L  K P      P  +  LV FLC  A
Sbjct: 178 AICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEA 237

Query: 248 ASYITGQVISIDGGYTA 264
            S + G   ++DGG+ A
Sbjct: 238 GSQVRGAAWNVDGGWLA 254

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  211 bits (540), Expect = 6e-68
 Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 7/257 (2%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-----WESKGFKV 69
            L+G  A+VTGG  GIG AIV+EL   G++V    R    +     E       +K  +V
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
               C++   ++   L+++    F GK+N LVNN     +  A   + + + +V+ TN+ 
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
            ++++C+  +         SIV +         P      A++  +  LTK+LA EWA  
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFPLAVHSGAARAGVYNLTKSLALEWACS 192

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            IR+N V+P  + +Q +  +        +     K P  R   P E+S +V FL  PAAS
Sbjct: 193 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAAS 252

Query: 250 YITGQVISIDGGYTAGN 266
           +ITGQ + +DGG +   
Sbjct: 253 FITGQSVDVDGGRSLYT 269

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  209 bits (535), Expect = 9e-68
 Identities = 78/256 (30%), Positives = 117/256 (45%), Gaps = 9/256 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL G  AL+TG   G G  + +  A+ GA V    RD+        E    G        
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAA 62

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYH 133
           D+S     +  +E   S F GK++ILVNNA +    + A     EE+  ++  NV   Y 
Sbjct: 63  DISKEADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121

Query: 134 LCQLAHPLLKASG----NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           +     P  K +G       I+ ++S       P L+ Y A+KG +  +TK LA E A  
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA 181

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            IRV A++P A  T +    + +   +   K     P+ R  +P++++   AFLC P AS
Sbjct: 182 KIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQAS 241

Query: 250 YITGQVISIDGGYTAG 265
            ITG  + +DGG + G
Sbjct: 242 MITGVALDVDGGRSIG 257

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  208 bits (533), Expect = 1e-67
 Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 13/253 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G   ++T   +GIG A     AR GA V     ++     ++QE E     +   V D
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE----SKLQELEKYP-GIQTRVLD 58

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++   Q ++    V      +L++L N A  V      +   +++   M+ NV S Y + 
Sbjct: 59  VTKKKQIDQFANEV-----ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 136 QLAHPLLKASGNASIVFMSSVAGAIS-IPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           +   P + A  + +I+ MSSVA ++  +     Y+ +K A+  LTK++A ++    IR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            V P  V+T      +      E  +   + +    R A   EI+ L  +L    ++Y+T
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233

Query: 253 GQVISIDGGYTAG 265
           G  + IDGG++ G
Sbjct: 234 GNPVIIDGGWSLG 246

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  208 bits (533), Expect = 2e-67
 Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 12/255 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G  A+VTGG++GIG AI   L + GA+V     D       +   E+ GF V     
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EV 65

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++     +  ++       G  ++L  NA +  M+ A + T EE+      N    +  
Sbjct: 66  DVTKRASVDAAMQKAIDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLA 124

Query: 135 CQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            Q+A     AS     IV  +S+A  +  P L+ Y+ASK A+   T+ LA E A  +IRV
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRV 184

Query: 194 NAVSP-------WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
           N V P                            + ++ TPL R  EP +++ +V FL   
Sbjct: 185 NCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASD 244

Query: 247 AASYITGQVISIDGG 261
           AA ++TGQ I++ GG
Sbjct: 245 AARFMTGQGINVTGG 259

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  209 bits (533), Expect = 3e-67
 Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 3/247 (1%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-WESKGFKVTGSVC 74
           LR   A +TGG  GIG+ I E   R G       R    +    ++   + G +      
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+         ++     F G+++IL+N AA   +  A   +   + +VM  +   ++++
Sbjct: 85  DVRAPPAVMAAVDQALKEF-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNV 143

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            ++ +          IV +++  G           ++K A++ +T++LA EW   +IRVN
Sbjct: 144 SRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVN 203

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           +++P  ++       L           +  +PL R     EI+  V +L  P ASY+TG 
Sbjct: 204 SLAPGPISGTEGLRRLGGPQ-ASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGA 262

Query: 255 VISIDGG 261
           V+  DGG
Sbjct: 263 VLVADGG 269

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  208 bits (532), Expect = 3e-67
 Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 4/249 (1%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVC 74
            +   ALVTG +RG+G A    LA  G ++     R +    E  +E E  G KV     
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           ++    + +++ + +   F G+L++ VNNAA  V++   E     +   M+ N ++    
Sbjct: 62  NVGQPAKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q A  L++ +G   IV +SS+     +   +    SK A+  LT+ LA E +   I VN
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVN 180

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           AVS  A++T       N   + E       TP  R  E  ++   V FL    A  I GQ
Sbjct: 181 AVSGGAIDTDALKHFPNREDLLE--DARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQ 238

Query: 255 VISIDGGYT 263
            I +DGG +
Sbjct: 239 TIIVDGGRS 247

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  207 bits (530), Expect = 7e-67
 Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 14/257 (5%)

Query: 15  SLRGMTALVTG--GTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESK-GFKVT 70
           SL+G   +VTG  G +G+G       A  GA+V  T         E ++E E   G K  
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
              C +   +  EKL++ V + F G+++  + NA         + ++E ++ V+  ++  
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNG 135

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAIS-IPRL-SAYAASKGAINQLTKNLACEWAT 188
           ++H  +      K  G  S+V  +S++G I+  P+  ++Y  +K     + ++LA EW  
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWR- 194

Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLI-AKTPLARSAEPNEISPLVAFLCLPA 247
           D  RVN++SP  ++T      L+D + +E  +L  +  P+ R     E+     +    A
Sbjct: 195 DFARVNSISPGYIDT-----GLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDA 249

Query: 248 ASYITGQVISIDGGYTA 264
           ++Y TG  + IDGGYT 
Sbjct: 250 STYTTGADLLIDGGYTT 266

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  207 bits (529), Expect = 7e-67
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 8/252 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+G  ALVTGG  G+G  +V+ L   GA V     ++    +   E    G +      D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S       ++  V     G LN+LVNNA +++        LE++S ++  N ES +  C
Sbjct: 61  VSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD--SIRV 193
           Q     +K +G  SI+ M+SV+  + I + + Y+ASK A++ LT+  A        +IRV
Sbjct: 120 QQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           N++ P  + T +    L   + +E V          R+  P  I+ LV FL    +S ++
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238

Query: 253 GQVISIDGGYTA 264
           G  +  D     
Sbjct: 239 GSELHADNSILG 250

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  207 bits (529), Expect = 8e-67
 Identities = 70/256 (27%), Positives = 105/256 (41%), Gaps = 12/256 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G +AL+TG  RGIG A  E   R GA+V     D     +   E    G        D
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE---IGPAAYAVQMD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  D  +  I        G L+ILVNNAAL  +    E T E Y  + + NV  +    
Sbjct: 63  VTRQDSIDAAIAATVEHA-GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTL 121

Query: 136 QLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           Q A   + A G    I+ M+S AG      ++ Y A+K A+  LT++   +     I VN
Sbjct: 122 QAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181

Query: 195 AVSP-------WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
           A++P       W     +     N    ++   +    P  R     +++ +  FL    
Sbjct: 182 AIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAE 241

Query: 248 ASYITGQVISIDGGYT 263
           + YI  Q  ++DGG  
Sbjct: 242 SDYIVSQTYNVDGGNW 257

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  206 bits (527), Expect = 2e-66
 Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 7/249 (2%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
                 A+VTG +RGIG AI   LA  G +V            E   + E+ G K   + 
Sbjct: 24  METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQ 83

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+S      +L  T    F G +++LVNNA ++ +    E     +  V++ N++ +++
Sbjct: 84  ADVSDPAAVRRLFATAEEAF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFN 142

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
             + A   L+  G   I+ MS+    +  P    YAA+K  +  +T  L+ E     I V
Sbjct: 143 TLREAAQRLRVGG--RIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITV 200

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NAV+P    T +     +D +   + KL    PL R   P +I+  VAFL  P  +++ G
Sbjct: 201 NAVAPGPTATDLFLEGKSDEVRDRFAKLA---PLERLGTPQDIAGAVAFLAGPDGAWVNG 257

Query: 254 QVISIDGGY 262
           QV+  +GG 
Sbjct: 258 QVLRANGGI 266

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  207 bits (528), Expect = 2e-66
 Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 11/260 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE--WESKGFKVTGS 72
           S+   TA++TG T GIG AI   LA+ GA++   G         + +         V   
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             D++   +   ++  V+  F G  +ILVNNA +  +++  ++ +E++  +++ N+ SS+
Sbjct: 82  PADMTKPSEIADMMAMVADRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSF 140

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           H  + A P +K  G   I+ ++S  G ++ P  SAY A+K  I  LTK +A E A   + 
Sbjct: 141 HTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVT 200

Query: 193 VNAVSPWAVNT-----QISPPDLNDLLVQEYVK---LIAKTPLARSAEPNEISPLVAFLC 244
           VN++ P  V T     QI        + +E V    ++   P  +     +++ L  +L 
Sbjct: 201 VNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLA 260

Query: 245 LPAASYITGQVISIDGGYTA 264
              A+ ITG  +S+DGG+TA
Sbjct: 261 GDDAAQITGTHVSMDGGWTA 280

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  206 bits (526), Expect = 2e-66
 Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 21/267 (7%)

Query: 1   MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ 60
           +    E ++       +    ++TG ++GIG  +V         V    R          
Sbjct: 11  VDLGTENLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK------- 63

Query: 61  EWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEY 120
              S    +     D+S  +  ++++      F G+++ LVNNA + + K   E T E+Y
Sbjct: 64  --PSADPDIHTVAGDISKPETADRIVREGIERF-GRIDSLVNNAGVFLAKPFVEMTQEDY 120

Query: 121 SSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS--AYAASKGAINQL 178
              +  NV   +H+ Q A   +   G+  IV +++      +  +     + +KG +N +
Sbjct: 121 DHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAV 180

Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISP 238
           T++LA E++   +RVNAVSP  + T + P + +         L    P+ R  E  ++  
Sbjct: 181 TRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHS-------TLAGLHPVGRMGEIRDVVD 233

Query: 239 LVAFLCLPAASYITGQVISIDGGYTAG 265
            V +  L  A +ITG+++ +DGG  AG
Sbjct: 234 AVLY--LEHAGFITGEILHVDGGQNAG 258

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  204 bits (522), Expect = 1e-65
 Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 10/253 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV---HTCGRDQNMINERIQEWESKGFKVTG 71
            L+    ++ GG + +G    +  A    ++   +   +D +  N+   E E +G KV  
Sbjct: 8   DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL 67

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
              DLS  ++  KL +     F GK++I +N    V+ K   E +  E+ ++ + N + +
Sbjct: 68  YQSDLSNEEEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVA 126

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           Y   + A   +  +G   I+ +++   A      S YA +K  +   T+  + E     I
Sbjct: 127 YFFIKQAAKHMNPNG--HIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
            VNA++P  ++T                   ++    +  +  +I+P++ FL      +I
Sbjct: 185 SVNAIAPGPMDTSFFYGQETKESTA---FHKSQAMGNQLTKIEDIAPIIKFLT-TDGWWI 240

Query: 252 TGQVISIDGGYTA 264
            GQ I  +GGYT 
Sbjct: 241 NGQTIFANGGYTT 253

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  203 bits (520), Expect = 2e-65
 Identities = 80/252 (31%), Positives = 116/252 (46%), Gaps = 10/252 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
           SL G TA VTGG+RGIG AI + LA  GA+V  T           + E E  G +     
Sbjct: 28  SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR 87

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D    +  E+ I        G L+ILVN+A +       E T+ ++  VM+ N  + + 
Sbjct: 88  ADNRDAEAIEQAIRETVEAL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFV 146

Query: 134 LCQLAHPLLKASGNASIVFMSS-VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
             + A   L   G   I+ + S +A  +  P +S Y+ASK A+  LTK LA +     I 
Sbjct: 147 AIRSASRHLGDGG--RIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGIT 204

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           VN V P + +T     D+N            +       EP +I+ LVA+L  P   ++T
Sbjct: 205 VNIVHPGSTDT-----DMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVT 259

Query: 253 GQVISIDGGYTA 264
           G  ++IDGG  A
Sbjct: 260 GASLTIDGGANA 271

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  203 bits (519), Expect = 3e-65
 Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 11/259 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE--WESKGFKVTGSV 73
           L+G  A+VTG T GIG  I   LA  GA +   G       E+++       G KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DLS G+    L++       G+++ILVNNA +       ++  E++ ++++ N+ + +H
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
               A P +K  G   I+ ++S  G ++    SAY A+K  +   TK  A E A   I  
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180

Query: 194 NAVSPWAVNT-----QISPPDLNDLLVQEYVK---LIAKTPLARSAEPNEISPLVAFLCL 245
           NA+ P  V T     QIS     + + QE      L  K P  +   P ++     FL  
Sbjct: 181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240

Query: 246 PAASYITGQVISIDGGYTA 264
            AA+ ITG  +S+DGG+TA
Sbjct: 241 DAAAQITGTTVSVDGGWTA 259

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  201 bits (515), Expect = 7e-65
 Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 10/252 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
                  +VTG   GIG A  E LAR GA+V     +        ++  + G        
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT---EYTLEEYSSVMSTNVESS 131
           D+S  +  + + +   + F G ++ LVNNAA+    +         E Y   MS N++ +
Sbjct: 66  DVSDPESAKAMADRTLAEF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGA 124

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
               +  +  +   G  +IV  SS A  +       Y  +K  IN LT+ L+ E    +I
Sbjct: 125 LWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSRELGGRNI 181

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           R+NA++P  ++T+ +       +V + VK +   PL+R   P+++  +  FL    AS+I
Sbjct: 182 RINAIAPGPIDTEANRTTTPKEMVDDIVKGL---PLSRMGTPDDLVGMCLFLLSDEASWI 238

Query: 252 TGQVISIDGGYT 263
           TGQ+ ++DGG  
Sbjct: 239 TGQIFNVDGGQI 250

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  201 bits (514), Expect = 1e-64
 Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 9/252 (3%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            ALVTG  +GIG AI   L + G +V     +         E    G        D+S  
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           DQ    +E       G  +++VNNA +         T E    V + NV+      Q A 
Sbjct: 64  DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122

Query: 140 PLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
              K  G+   I+   S AG +  P L+ Y++SK A+  LT+  A + A   I VN   P
Sbjct: 123 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 182

Query: 199 -------WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
                  WA   +         L     +   +  L R +EP +++  V++L  P + Y+
Sbjct: 183 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 242

Query: 252 TGQVISIDGGYT 263
           TGQ + IDGG  
Sbjct: 243 TGQSLLIDGGMV 254

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  200 bits (512), Expect = 1e-64
 Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 13/248 (5%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERI-QEWESKGFKVTGSVCDLSF 78
            ALVT      G A VE L + G +V           ER   E E+ G            
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAE------ 56

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAAL---VVMKRATEYTLEEYSSVMSTNVESSYHLC 135
             + E+L++         ++ +V+N  +   +        +  +   +          L 
Sbjct: 57  -QKPERLVDATLQHG-EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLL 114

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           Q A   L+A+G AS++F++S  G   +     Y  ++ A   L ++ A   + D I + A
Sbjct: 115 QSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYA 174

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           + P   N     P  +     E  + +    PL R   P+E+  L+ FL    A+ I GQ
Sbjct: 175 IGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQ 234

Query: 255 VISIDGGY 262
             +  GGY
Sbjct: 235 FFAFTGGY 242

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  201 bits (513), Expect = 2e-64
 Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 23/260 (8%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
              G    VTG  +GIGYA        GA V           ++   +  + +     V 
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKV--------TGFDQ--AFTQEQYPFATEVM 53

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++   Q  ++ + + +    +L+ LVN A ++ M    + + E++    + NV  +++L
Sbjct: 54  DVADAAQVAQVCQRLLAET-ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNL 112

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q      +     +IV ++S A       +SAY ASK A+  L  ++  E A   +R N
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCN 172

Query: 195 AVSPWAVNT---------QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
            VSP + +T           +         +++   I   PL + A P EI+  + FL  
Sbjct: 173 VVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGI---PLGKIARPQEIANTILFLAS 229

Query: 246 PAASYITGQVISIDGGYTAG 265
             AS+IT Q I +DGG T G
Sbjct: 230 DLASHITLQDIVVDGGSTLG 249

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  202 bits (515), Expect = 2e-64
 Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 18/263 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  AL+TGG  G+G A+V+     GA V    +    + E        G    G V D
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGD 59

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNA-----ALVVMKRATEYTLEEYSSVMSTNVES 130
           +     +++  E   + F GK++ L+ NA     +  +     +     +  +   NV+ 
Sbjct: 60  VRSLQDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
             H  +   P L +S   S+VF  S AG         Y A+K A+  L + +A E A   
Sbjct: 119 YIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH- 176

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYV------KLIAKTPLARSAEPNEISPLVAFLC 244
           +RVN V+P  +NT +  P    L  Q          L +  P+ R     E +    F  
Sbjct: 177 VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFA 236

Query: 245 LPAAS-YITGQVISIDGGYTAGN 266
               S   TG +++ DGG     
Sbjct: 237 TRGDSLPATGALLNYDGGMGVRG 259

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  200 bits (512), Expect = 2e-64
 Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 11/254 (4%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASV--HTCGRDQNMINERIQEWESKGFKVTGSVCD 75
              A+VTGG +GIG  I E+LA  G  +      + +    E I+  E+   K      D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++     +  I+  +    G  ++LVNNA +  +K   E T E+   + S NV S +   
Sbjct: 62  VTDKANFDSAIDEAAEKL-GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGI 120

Query: 136 QLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           Q A       G    I+  +S+A     P LSAY+ +K A+  LT+  A E A     VN
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180

Query: 195 AVSP-------WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
           A +P       W              + + + +  +   L R + P +++ LV+FL    
Sbjct: 181 AYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN 240

Query: 248 ASYITGQVISIDGG 261
           ++Y+TGQV+ +DGG
Sbjct: 241 SNYVTGQVMLVDGG 254

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  200 bits (510), Expect = 5e-64
 Identities = 71/249 (28%), Positives = 115/249 (46%), Gaps = 5/249 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+   A++TGG  GIG AI E  A  GA +           E      + G +V    CD
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S     E   + V S F G+ +ILVNNA +  +    E T E++      NV+S + + 
Sbjct: 63  VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 121

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P +K +G   I+ ++S    + I   + Y ++K A    T+ LA +   D I VNA
Sbjct: 122 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 181

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           ++P  V T  +        + + +  +    + R   P +++   AFL    AS+ITGQ 
Sbjct: 182 IAPSLVRTATT-EASALSAMFDVLPNML-QAIPRLQVPLDLTGAAAFLASDDASFITGQT 239

Query: 256 ISIDGGYTA 264
           +++DGG   
Sbjct: 240 LAVDGGMVR 248

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  200 bits (511), Expect = 7e-64
 Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 8/270 (2%)

Query: 1   MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ 60
           M   + P     +  L+   A++TGG  GIG    +   R+GA V       +   +   
Sbjct: 1   MGSTSTPDSSTNR--LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN 58

Query: 61  EWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV--VMKRATEYTLE 118
              S    ++   CD++  +    L++T  +   GKL+I+  N  ++        E   E
Sbjct: 59  NIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNE 116

Query: 119 EYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS-AYAASKGAINQ 177
           ++  VM  NV  ++ + + A  ++  +   SIVF +S++   +   +S  Y A+K A+  
Sbjct: 117 DFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLG 176

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-DLLVQEYVKLIAKTPLARSAEPNEI 236
           LT +L  E     IRVN VSP+ V + +       D    E +   A           ++
Sbjct: 177 LTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDV 236

Query: 237 SPLVAFLCLPAASYITGQVISIDGGYTAGN 266
           +  VA+L    + Y++G  + IDGGYT  N
Sbjct: 237 ADAVAYLAGDESKYVSGLNLVIDGGYTRTN 266

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  199 bits (508), Expect = 8e-64
 Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 10/253 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
            L+G  ALVTG +RGIG AI + LA  GA V    G  +    E + E +S G       
Sbjct: 4   MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 63

Query: 74  CDLSFGDQREKLIETVSSVF-----DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
            +L      E L  ++ +         K +IL+NNA +       E T + +  ++S N 
Sbjct: 64  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 123

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           ++ + + Q A   L+ +    I+ +SS A  IS+P   AY+ +KGAIN +T  LA +   
Sbjct: 124 KAPFFIIQQALSRLRDNS--RIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 181

Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
             I VNA+ P  V T ++   L+D ++++Y      +   R  E  +I+   AFL  P +
Sbjct: 182 RGITVNAILPGFVKTDMNAELLSDPMMKQYAT--TISAFNRLGEVEDIADTAAFLASPDS 239

Query: 249 SYITGQVISIDGG 261
            ++TGQ+I + GG
Sbjct: 240 RWVTGQLIDVSGG 252

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  198 bits (507), Expect = 9e-64
 Identities = 74/247 (29%), Positives = 113/247 (45%), Gaps = 18/247 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV-- 73
           L+G   LVTG  RGIG A     A  GASV   GR +  + E   + +S G      +  
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71

Query: 74  -CDLSFGDQREKLIETVSSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESS 131
             + +   Q  +L   V   F G+L+ L++NA+++       +   E++  VM  NV ++
Sbjct: 72  NLENATAQQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNAT 130

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW-ATDS 190
           + L +   PLLK S +ASI F SS  G        AY  SK A   L + LA E     +
Sbjct: 131 FMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTA 190

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           +R N+++P A  T         +  Q Y     + PL     P +I P+  +L  P ++ 
Sbjct: 191 VRANSINPGATRT--------GMRAQAY---PDENPLNN-PAPEDIMPVYLYLMGPDSTG 238

Query: 251 ITGQVIS 257
           I GQ ++
Sbjct: 239 INGQALN 245

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  198 bits (507), Expect = 2e-63
 Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 9/264 (3%)

Query: 1   MAEAAEPVFGDKKWSLRGMTALVTGGT-RGIGYAIVEELARFGASVHTCGRDQNMINERI 59
           ++EA + + G     L+G   LVT     GIG          GA V      +  + E  
Sbjct: 7   LSEAPKEIDGHGL--LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR 64

Query: 60  QEWESKGF-KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLE 118
            +    G  +V   VCD++  +  + LI        G+L++LVNNA L       + T E
Sbjct: 65  DQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA-GRLDVLVNNAGLGGQTPVVDMTDE 123

Query: 119 EYSSVMSTNVESSYHLCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQ 177
           E+  V++  + S     + A    +   +   IV  +SV G  +    S YAA+K  +  
Sbjct: 124 EWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMA 183

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEIS 237
           LT+  A E     +R+NAVSP     +      +  L+     L +     R+AEP E++
Sbjct: 184 LTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDR---LASDEAFGRAAEPWEVA 240

Query: 238 PLVAFLCLPAASYITGQVISIDGG 261
             +AFL    +SY+TG+V+S+   
Sbjct: 241 ATIAFLASDYSSYMTGEVVSVSSQ 264

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  198 bits (506), Expect = 2e-63
 Identities = 56/251 (22%), Positives = 96/251 (38%), Gaps = 16/251 (6%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           TA+VT      G      L+  G +V          +E       + F  T         
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSE 56

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRAT---EYTLEEYSSVMSTNVESSYHLCQ 136
            +  +LIE V+S + G++++LV+N             +Y +E+Y   +       + L  
Sbjct: 57  QEPAELIEAVTSAY-GQVDVLVSNDI--FAPEFQPIDKYAVEDYRGAVEALQIRPFALVN 113

Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
                +K   +  I+F++S         LS Y +++     L   L+ E    +I V A+
Sbjct: 114 AVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAI 173

Query: 197 SPWAVNTQISP--PDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            P  ++++ SP                 +   T L R     E+  LVAFL   +  Y+T
Sbjct: 174 GPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLT 233

Query: 253 GQVISIDGGYT 263
           GQV  + GG+ 
Sbjct: 234 GQVFWLAGGFP 244

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  198 bits (505), Expect = 2e-63
 Identities = 76/259 (29%), Positives = 117/259 (45%), Gaps = 16/259 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-MINERIQEWESKGFKVTGSV 73
            L+G   L+TG ++GIG A     AR GA V   GR     I+E I    + G       
Sbjct: 4   DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSY 132
            DL+  +  ++L++   + F G +++L+NNA  +V  K   E     Y +VM  N+ S  
Sbjct: 64  ADLATSEACQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122

Query: 133 HLCQLAHPLLKASGNA-----SIVFMSSVAGAIS-IPRLSAYAASKGAINQLTKNLACEW 186
              + A P L A+  A     +++   S+AG     P    Y A+K  ++ + KN     
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFH 182

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCL 245
             D +R N VSP  V+T       +    Q+   ++    P+ R     E++P   F   
Sbjct: 183 TKDGVRFNIVSPGTVDT-----AFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFAS 237

Query: 246 PAAS-YITGQVISIDGGYT 263
             AS YITGQV+ I+GG  
Sbjct: 238 HLASGYITGQVLDINGGQY 256

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  196 bits (500), Expect = 2e-62
 Identities = 71/257 (27%), Positives = 117/257 (45%), Gaps = 13/257 (5%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
            L G  ALVTG  RGIG A+   L R GA V            + + E ++ G       
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+    +  KL +   + F G L+I V+N+ +V      + T EE+  V S N    + 
Sbjct: 75  ADIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFF 133

Query: 134 LCQLAHPLLKASGNASIVFMSS-VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           + + A+  L   G   IV  SS  +   S+P+ S Y+ SKGA++   +  + +     I 
Sbjct: 134 VAREAYRHLTEGG--RIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKIT 191

Query: 193 VNAVSPWAVNT-------QISPPDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLC 244
           VNAV+P    T           P+      ++  ++ A  +PL R+  P +++ +V FL 
Sbjct: 192 VNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLV 251

Query: 245 LPAASYITGQVISIDGG 261
                ++ G+V+++DGG
Sbjct: 252 SKEGEWVNGKVLTLDGG 268

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  195 bits (499), Expect = 3e-62
 Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 21/269 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV-------------HTCGRDQNMINERIQEW 62
           L G  A +TG  RG G A    +A  GA +                    + ++E ++  
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 63  ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS 122
           E+   ++  +V D    D+  K+++   +   G+L+I+V NA +   +   + T E++  
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRD 127

Query: 123 VMSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN 181
           VM  NV  +++      P +   G   SI+ +SS AG    P +  Y ASK A+  L + 
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARA 187

Query: 182 LACEWATDSIRVNAVSPWAVNTQISPPDLN------DLLVQEYVKLIAKTPLARSAEPNE 235
            A E    SIRVN+V P  VNT +   D+            +   ++        AEP +
Sbjct: 188 FAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPED 247

Query: 236 ISPLVAFLCLPAASYITGQVISIDGGYTA 264
           I+  V +L    +  +T   I +D G T 
Sbjct: 248 IADTVCWLASDESRKVTAAQIPVDQGSTQ 276

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  195 bits (498), Expect = 5e-62
 Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 14/272 (5%)

Query: 3   EAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQE 61
           +A     G +  SL G  ALVTG  RGIG  +  EL R G  V            E +  
Sbjct: 14  DAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAA 73

Query: 62  WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS 121
            +  G        ++   +   ++ E    +F GKL+I+ +N+ +V      + T EE+ 
Sbjct: 74  IKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFD 132

Query: 122 SVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG-AISIPRLSAYAASKGAINQLTK 180
            V + N    + + + A+  L+  G   ++ M S+ G A ++P+ + Y+ SKGAI    +
Sbjct: 133 RVFTINTRGQFFVAREAYKHLEIGG--RLILMGSITGQAKAVPKHAVYSGSKGAIETFAR 190

Query: 181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK---------LIAKTPLARSA 231
            +A + A   I VN V+P  + T +      + +                +  +PL R  
Sbjct: 191 CMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVG 250

Query: 232 EPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
            P +I+ +V FL      ++TG+VI IDGG  
Sbjct: 251 LPIDIARVVCFLASNDGGWVTGKVIGIDGGAC 282

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  194 bits (495), Expect = 9e-62
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 13/252 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G T LVTG   GIG A ++  AR GAS+    R++ ++ E +        +    V D
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S     E +       F G+L+ + + A +     +    LE +  V+  N+  S+ + 
Sbjct: 61  VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 119

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A  +L+  G  S+V   SVAG +    L+ YAA K  +  L + LA E A   +RVN 
Sbjct: 120 RKAGEVLEEGG--SLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNV 176

Query: 196 VSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           + P  + T      +   L      + +  +PL R+  P E++    FL    ++YITGQ
Sbjct: 177 LLPGLIQT-----PMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ 231

Query: 255 VISIDGGYTAGN 266
            + +DGG +   
Sbjct: 232 ALYVDGGRSIVG 243

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  194 bits (494), Expect = 1e-61
 Identities = 67/273 (24%), Positives = 100/273 (36%), Gaps = 53/273 (19%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
             +++G   GIG A  + L   G  +                           + DLS  
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD-----------------AEVIADLSTA 45

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           + R++ I  V +     ++ LV  A L           +   +V+S N   +  L     
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGP-------QTKVLGNVVSVNYFGATELMDAFL 98

Query: 140 PLLKASGNASIVFMSSVAGAI----------------------------SIPRLSAYAAS 171
           P LK     + V +SSVA A                                   AYA S
Sbjct: 99  PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158

Query: 172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSA 231
           K A+    +  A  W    +R+N ++P A  T +    L D    E +      P+ R A
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESI-AKFVPPMGRRA 217

Query: 232 EPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
           EP+E++ ++AFL  PAASY+ G  I IDGG  A
Sbjct: 218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  194 bits (496), Expect = 1e-61
 Identities = 72/259 (27%), Positives = 109/259 (42%), Gaps = 14/259 (5%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
            L G  AL TG  RGIG  I  EL R GASV    G       E + E +  G +     
Sbjct: 18  PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 77

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+S   +   L +   S F G L+ +++N+ + V     E T E +  V + N    + 
Sbjct: 78  ADISKPSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFF 136

Query: 134 LCQLAHPLLKASGNASIVFMSSVAG-AISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           + Q      +  G   I+  SS+A     IP  + YA SK A+    +  A +     + 
Sbjct: 137 VAQQGLKHCRRGG--RIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 194

Query: 193 VNAVSPWAVNT--------QISPPDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFL 243
           VN ++P  V T          +P     +  ++  + +A   PL R   P +I   V+ L
Sbjct: 195 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 254

Query: 244 CLPAASYITGQVISIDGGY 262
           C   + +I GQVI + GG 
Sbjct: 255 CQEESEWINGQVIKLTGGG 273

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  194 bits (495), Expect = 1e-61
 Identities = 53/261 (20%), Positives = 98/261 (37%), Gaps = 24/261 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV-------HTCGRDQNMINERIQEWESKGF 67
           +L G T  +TG +RGIG AI    AR GA+V           +    I+       + G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
           +     CD+   DQ    +      F G ++ILVNNA+ + ++   +  ++ +  +   N
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVN 121

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS--IPRLSAYAASKGAINQLTKNLACE 185
              S+   Q   P L  + N  I+ ++             + Y  +K  ++ +T  LA E
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAE 181

Query: 186 WATDSIRVNAVSP-WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
           +    + +NA+ P   + T             + + ++     A    P  ++     + 
Sbjct: 182 FGPQGVAINALWPRTVIAT-------------DAINMLPGVDAAACRRPEIMADAAHAVL 228

Query: 245 LPAASYITGQVISIDGGYTAG 265
              A+   GQ +  D      
Sbjct: 229 TREAAGFHGQFLIDDEVLAQA 249

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  193 bits (493), Expect = 2e-61
 Identities = 75/254 (29%), Positives = 108/254 (42%), Gaps = 10/254 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVC 74
               T +V G  R IG A     A+ GA+V  T           + E E  G        
Sbjct: 6   FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYH 133
           DL+   + E  I   +  F G+++ LV+ A  ++  K   E     +  V+  N+ S + 
Sbjct: 66  DLTNAAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFL 124

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
             + A P +   G  +IV  SS AG     P   AYA SKGA+   T+ LA E     IR
Sbjct: 125 TAKTALPKMAKGG--AIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG-PKIR 181

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           VNAV P  ++T           V+E  ++   T L R     +++ LVAFL    A+Y+T
Sbjct: 182 VNAVCPGMISTTFHD-TFTKPEVRE--RVAGATSLKREGSSEDVAGLVAFLASDDAAYVT 238

Query: 253 GQVISIDGGYTAGN 266
           G    I+GG     
Sbjct: 239 GACYDINGGVLFSE 252

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  193 bits (494), Expect = 2e-61
 Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 14/257 (5%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
                 A+VTGG RGIG  I   LA  G  +  T   D   +   I E    G +V    
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNVESS 131
            DL+     +  ++ V + F G+++ LVNNA +  + R    +   E + +++  N+  +
Sbjct: 86  ADLADLSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGT 144

Query: 132 YHLCQLA-HPLLKASGNAS--IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
               Q     +L +   AS  I+ ++SV+  ++ P    Y  SK  +   ++ LA   A 
Sbjct: 145 VFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAE 204

Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK--TPLARSAEPNEISPLVAFLCLP 246
             I V  V P  + +     D+   +  +Y  LI     P+ R  EP +I  +VA L   
Sbjct: 205 TGIAVFEVRPGIIRS-----DMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGG 259

Query: 247 AASYITGQVISIDGGYT 263
              + TG VI  DGG +
Sbjct: 260 QFGFATGSVIQADGGLS 276

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  191 bits (488), Expect = 1e-60
 Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 24/265 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK--VTGS 72
            L+G TALVTG T GIG AI   L   GA+V   GR +  +NE I+E  ++     +   
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           V DL      + +IE        K++IL+NN  +       +   E++  +   N+ S  
Sbjct: 67  VADLGTEQGCQDVIEKY-----PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGV 121

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
            L +     +       ++F++S A  +    ++ Y+A+K     L+++LA      ++ 
Sbjct: 122 RLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVT 181

Query: 193 VNAVSP--------------WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISP 238
           VN + P                 N Q++  +     ++E         + R   P EI+ 
Sbjct: 182 VNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTS---IIQRLIRPEEIAH 238

Query: 239 LVAFLCLPAASYITGQVISIDGGYT 263
           LV FL  P +S I G  + IDGG  
Sbjct: 239 LVTFLSSPLSSAINGSALRIDGGLV 263

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  190 bits (484), Expect = 4e-60
 Identities = 50/247 (20%), Positives = 99/247 (40%), Gaps = 16/247 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L     L+TG ++ +G      L   G  V    R ++     +++  +          
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALY-----G 78

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D S        I+ + +     L  +V+NA+  + +   E   + ++ + S ++ + Y +
Sbjct: 79  DFSCETGIMAFIDLLKTQT-SSLRAVVHNASEWLAETPGE-EADNFTRMFSVHMLAPYLI 136

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
                PLL AS  A IV +S         +  AY A+K  +  LT + A  +A   ++VN
Sbjct: 137 NLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAPL-VKVN 195

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
            ++P  +  Q                 +AK+ L        I   + +L    ++Y+TG 
Sbjct: 196 GIAPALLMFQPKDDA------AYRANALAKSALGIEPGAEVIYQSLRYLL--DSTYVTGT 247

Query: 255 VISIDGG 261
            ++++GG
Sbjct: 248 TLTVNGG 254

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  189 bits (482), Expect = 8e-60
 Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 11/256 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES--KGFKVTGS 72
            ++G  A+VT G+ G+G+A   ELAR GA +    R++  +        S   G +V   
Sbjct: 4   GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             D+      ++L E    +  G  +ILV +       R  E  +E++         S+ 
Sbjct: 64  AGDIREPGDIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAV 121

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
            + + A   +   G   +V++ SV        L+     +  +  + + LA E A   + 
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181

Query: 193 VNAVSPWAVNT-------QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
           VNAV P  + T       +         + +    + ++ P+ R  +P E++ +VAFL  
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLAS 241

Query: 246 PAASYITGQVISIDGG 261
             AS+ITG VI +DGG
Sbjct: 242 EKASFITGAVIPVDGG 257

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  188 bits (480), Expect = 1e-59
 Identities = 61/256 (23%), Positives = 103/256 (40%), Gaps = 14/256 (5%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGSVCDL 76
           G   LVTG +RGIG +IV+ L          G  ++     +++  E  G +    V D+
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS--EAPLKKLKEKYGDRFFYVVGDI 59

Query: 77  SFGDQREKLIETVSSVFDGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +     ++L+        GK++ LV NA  L  ++   E  +  +  +   N  S   L 
Sbjct: 60  TEDSVLKQLVNAAVKGH-GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
            +A P LK +   ++VF+SS A  +      AY +SK A+N     LA E     ++  A
Sbjct: 119 GIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIA 175

Query: 196 VSPWAVNTQ----ISPPDLNDLLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCL-PAAS 249
           V+P  V+T     I        +  E            +  + +  + + A L L     
Sbjct: 176 VAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPD 235

Query: 250 YITGQVISIDGGYTAG 265
            + GQ +S +    A 
Sbjct: 236 GVNGQYLSYNDPALAD 251

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  189 bits (482), Expect = 2e-59
 Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 20/269 (7%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV-------------HTCGRDQNMINERIQE 61
           SL+G  A +TG  RG G +    LA  GA +                      ++E  + 
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 62  WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS 121
            E +G K    V D+       +L+      F G+L+++V NA ++   R  E T E++ 
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWD 130

Query: 122 SVMSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
           +V+  N+  ++   +   P +  +GN  SIV +SS AG  + P    Y+ASK  +  LT 
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190

Query: 181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEY-----VKLIAKTPLARSAEPNE 235
            LA E     IRVN++ P++V T +  P+    +   +                    +E
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADE 250

Query: 236 ISPLVAFLCLPAASYITGQVISIDGGYTA 264
           ++ +VA+L    +  +TG  I +D G   
Sbjct: 251 VADVVAWLAGDGSGTLTGTQIPVDKGALK 279

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  188 bits (480), Expect = 3e-59
 Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 11/247 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-WESKGFKVTGSV 73
           S  G  ALVTGG  G+G  I + L+  G SV   GR  ++++    E     G  V   V
Sbjct: 30  SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVV 89

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSY 132
           CD+   DQ   L   V + F  +L++LVNNA   V      E T E+++ +++ N+  ++
Sbjct: 90  CDVGDPDQVAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAF 148

Query: 133 HLCQLAHPLLKASGNAS--IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
              Q A  ++KA       I+   S++     P  + Y A+K AI  LTK+ A +     
Sbjct: 149 LCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHD 208

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC-LPAAS 249
           I    +      T     D+   +    ++   +     +     I+  V ++  LP ++
Sbjct: 209 IACGQIDIGNAAT-----DMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSA 263

Query: 250 YITGQVI 256
            +    +
Sbjct: 264 NVLTMTV 270

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  187 bits (477), Expect = 3e-59
 Identities = 43/258 (16%), Positives = 87/258 (33%), Gaps = 31/258 (12%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
            + S      LV GG+  +G  +V+       +  +    +N                  
Sbjct: 16  PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN------------PNADHS 63

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVES 130
                S  ++ + +IE ++S    K++  V  A        +++  L+    ++  N+ S
Sbjct: 64  FTIKDSGEEEIKSVIEKINSKS-IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYS 122

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           ++    +   LL   G    V   + A       + AY A+K A + + K+LA E     
Sbjct: 123 AFASAHIGAKLLNQGG--LFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLP 180

Query: 191 --IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
                  + P  ++T  +   ++D            TPL+  AE      L  +     +
Sbjct: 181 AGSTSLGILPVTLDTPTNRKYMSD------ANFDDWTPLSEVAE-----KLFEWSTNSDS 229

Query: 249 SYITGQVISID--GGYTA 264
               G ++  +     T 
Sbjct: 230 RPTNGSLVKFETKSKVTT 247

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  188 bits (480), Expect = 4e-59
 Identities = 79/276 (28%), Positives = 118/276 (42%), Gaps = 30/276 (10%)

Query: 6   EPVFGDKKWS----LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN----- 56
            P  G+K +     L+   ALVTGG  GIG A     AR GA V         IN     
Sbjct: 33  VPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADV--------AINYLPAE 84

Query: 57  ----ERIQEW-ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVM-K 110
               ++++   E  G K      DLS       L+        G L+IL   A       
Sbjct: 85  EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL-GGLDILALVAGKQTAIP 143

Query: 111 RATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA 170
              + T E++    + NV + + + Q A PLL      SI+  SS+      P L  YAA
Sbjct: 144 EIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAA 201

Query: 171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLAR 229
           +K AI   ++ LA + A   IRVN V+P  + T +          Q+ +     +TP+ R
Sbjct: 202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT---QDKIPQFGQQTPMKR 258

Query: 230 SAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG 265
           + +P E++P+  +L    +SY+T +V  + GG   G
Sbjct: 259 AGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG 294

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  187 bits (477), Expect = 4e-59
 Identities = 61/252 (24%), Positives = 99/252 (39%), Gaps = 13/252 (5%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
              +TG   GIG A+ E LAR G +V    R Q  I   +     +   V   +     G
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDR--CG 60

Query: 80  DQREKLIETV---SSVFDGKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNVESSYHL 134
              + L+       +  +  L + VN   +  +        +  +  + +     ++   
Sbjct: 61  GVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQP 120

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
                P+++A           +A         AYA SK A+  L +    +WA   +R+N
Sbjct: 121 GAAELPMVEAMLAGDEARAIELAE-QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLN 179

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            V+P AV T +      D     Y +       PL R +EP E++  +AFL  P AS+I 
Sbjct: 180 VVAPGAVETPLLQASKAD---PRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIH 236

Query: 253 GQVISIDGGYTA 264
           G V+ +DGG  A
Sbjct: 237 GSVLFVDGGMDA 248

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  188 bits (479), Expect = 5e-59
 Identities = 62/264 (23%), Positives = 103/264 (39%), Gaps = 19/264 (7%)

Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASV-------HTCGRDQNMINERIQEW 62
           G    SLRG T  ++GG+RGIG AI + +A  GA+V           +    I    +E 
Sbjct: 1   GPGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEI 60

Query: 63  ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS 122
           E  G +    V D+  GD     +      F G ++I VNNA+ + +    E  L+ +  
Sbjct: 61  EEAGGQALPIVGDIRDGDAVAAAVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDL 119

Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAASKGAINQLTKN 181
           +    V  +Y + Q   P +K   N  I+ +S          R + Y  +K  +      
Sbjct: 120 MNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALG 179

Query: 182 LACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA 241
           +A E     I  N + P    T ++   + +LL            +ARS +P   +    
Sbjct: 180 IAEELRDAGIASNTLWP---RTTVATAAVQNLLG-------GDEAMARSRKPEVYADAAY 229

Query: 242 FLCLPAASYITGQVISIDGGYTAG 265
            +    +SY    ++  D    +G
Sbjct: 230 VVLNKPSSYTGNTLLCEDVLLESG 253

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  186 bits (474), Expect = 3e-58
 Identities = 74/256 (28%), Positives = 127/256 (49%), Gaps = 23/256 (8%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
                 ALVTG  RGIG  I + LA+  + V    R Q   +  + E +S G++ +G   
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           D+S  ++  ++I  + +     ++ILVNNA        + MK       +E+  V+ TN+
Sbjct: 101 DVSKKEEISEVINKILTEH-KNVDILVNNAGITRDNLFLRMKN------DEWEDVLRTNL 153

Query: 129 ESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
            S +++ Q     ++    G   I+ +SS+ G       + Y++SK  +   TK+LA E 
Sbjct: 154 NSLFYITQPISKRMINNRYG--RIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKEL 211

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCL 245
           A+ +I VNA++P  +++     D+ D + ++  K +I+  P  R   P E++ L  FL  
Sbjct: 212 ASRNITVNAIAPGFISS-----DMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSS 266

Query: 246 PAASYITGQVISIDGG 261
             + YI G+V  IDGG
Sbjct: 267 DKSGYINGRVFVIDGG 282

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  184 bits (470), Expect = 6e-58
 Identities = 78/250 (31%), Positives = 116/250 (46%), Gaps = 9/250 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-WESKGFKVTGSV 73
            L+G + +VTGGT+GIG  I    AR GA+V   GR    I+  + +  +    KV G  
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+S   Q + L       F G ++++  NA +         T E+ + + + NV  +++
Sbjct: 67  TDVSDRAQCDALAGRAVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFY 125

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAIS-IPRLSAYAASKGAINQLTKNLACEWATDSIR 192
             Q     L ASG+  +V  SS+ G I+  P  S Y A+K A     +  A E A   I 
Sbjct: 126 AVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKIT 185

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           VNA+ P  + T     +      +EY+  +    P      P +I  L AFL    A YI
Sbjct: 186 VNAIMPGNIMT-----EGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYI 240

Query: 252 TGQVISIDGG 261
           TGQ I++DGG
Sbjct: 241 TGQAIAVDGG 250

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  185 bits (471), Expect = 7e-58
 Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 10/255 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
            R  TA VTG + GIG A+   LA  G +V+ C RD   ++  +    + G  V GS CD
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  D+    +      F G + ILVN+A         +     ++ V+ TN+   + + 
Sbjct: 82  VTSTDEVHAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVT 140

Query: 136 QLAHPLLK--ASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           +          +G   IV ++S  G   +   + Y ASK  +   TK++  E A   I V
Sbjct: 141 REVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITV 200

Query: 194 NAVSPWAVNT-----QISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLP 246
           NAV P  V T            +  + ++ V     AK PL R + P E++ LV +L   
Sbjct: 201 NAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTD 260

Query: 247 AASYITGQVISIDGG 261
           AA+ IT Q +++ GG
Sbjct: 261 AAASITAQALNVCGG 275

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  182 bits (464), Expect = 3e-57
 Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 23/256 (8%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL    ALVTG +RGIG+ +   LA  GA+V      Q    +     + KGFK  G V 
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           ++S  +  +     + +     ++ILVNNA       ++ M        +E+ SV++TN+
Sbjct: 62  NISDIESIQNFFAEIKAEN-LAIDILVNNAGITRDNLMMRMS------EDEWQSVINTNL 114

Query: 129 ESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
            S + + +     ++K   G   I+ + SV G+   P  + Y A+K  +   +K+LA E 
Sbjct: 115 SSIFRMSKECVRGMMKKRWG--RIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEV 172

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCL 245
           A+ +I VN V+P  + T     D+ D L  E    +  K P  +  EP +I+  VAFL  
Sbjct: 173 ASRNITVNVVAPGFIAT-----DMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLAS 227

Query: 246 PAASYITGQVISIDGG 261
             A YITGQ + ++GG
Sbjct: 228 EEAKYITGQTLHVNGG 243

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  183 bits (467), Expect = 4e-57
 Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 28/270 (10%)

Query: 6   EPVFGDKKWS----LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN----- 56
            P F D  +     L+G   L+TGG  GIG A+    A+ GA++         I      
Sbjct: 31  LPQFEDPNYKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANI--------AIAYLDEE 82

Query: 57  ---ERIQEW-ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRA 112
                 +++ E +G K      DLS     + +++       G LNILVNN A    ++ 
Sbjct: 83  GDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL-GSLNILVNNVAQQYPQQG 141

Query: 113 -TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS 171
               T E+       N+ S +H+ + A   LK      I+  +S+        L  Y+A+
Sbjct: 142 LEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGD--VIINTASIVAYEGNETLIDYSAT 199

Query: 172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSA 231
           KGAI   T++L+       IRVN V+P  + T + P   ++  V ++       P+ R  
Sbjct: 200 KGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGS---NVPMQRPG 256

Query: 232 EPNEISPLVAFLCLPAASYITGQVISIDGG 261
           +P E++P   +L    +SY+TGQ+I ++GG
Sbjct: 257 QPYELAPAYVYLASSDSSYVTGQMIHVNGG 286

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  181 bits (463), Expect = 6e-57
 Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 12/253 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
                 AL+T GT+G+G  + E+L   G SV  T   D   +    + ++    ++    
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNVESS 131
            D++  +   K++E   S F GK++ L+NNA   V +R    +Y  +E++ ++  N+ + 
Sbjct: 64  ADVTKKEDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAV 122

Query: 132 YHLCQLAHPLLKASGNASIVFMS--SVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           +HL +L  P+++      I+         A      SA+AA+K  +  LTK +A E A  
Sbjct: 123 FHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEY 182

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAA 248
            I  N V P  +       ++ +  +QE        TP+ RS    +I+  ++FLC   +
Sbjct: 183 GITANMVCPGDIIG-----EMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDS 237

Query: 249 SYITGQVISIDGG 261
             ITG +I + G 
Sbjct: 238 DMITGTIIEVTGA 250

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  182 bits (464), Expect = 6e-57
 Identities = 85/256 (33%), Positives = 130/256 (50%), Gaps = 23/256 (8%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L    A+VTG +RGIG AI  ELAR GA V      +         ++  G +  G+V 
Sbjct: 25  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           +++     + L+E+    F G LN+LVNNA        + MK       +E+ +V+ TN+
Sbjct: 85  NVNDATAVDALVESTLKEF-GALNVLVNNAGITQDQLAMRMKD------DEWDAVIDTNL 137

Query: 129 ESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           ++ + L +    P++KA  G   IV ++SV G+   P    YAA+K  +  +T+ LA E 
Sbjct: 138 KAVFRLSRAVLRPMMKARGG--RIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREI 195

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCL 245
            +  I VN V+P  ++T     D+   L QE    L  + PL R   P +I+  VAFL  
Sbjct: 196 GSRGITVNCVAPGFIDT-----DMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLAS 250

Query: 246 PAASYITGQVISIDGG 261
           P A YITG  + ++GG
Sbjct: 251 PQAGYITGTTLHVNGG 266

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  182 bits (465), Expect = 7e-57
 Identities = 69/272 (25%), Positives = 113/272 (41%), Gaps = 24/272 (8%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV---HTCGRDQNM---------INERIQEWE 63
             G TAL+TGG RG+G +    LA  GA +     C     +         + E +   E
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 64  SKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV 123
             G +   +  D+      E  +        G ++I + NA +  +    E    ++  V
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEV 126

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
           + TN+  +++      P +       IV +SS+ G  +    ++Y +SK  +  LTK  A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186

Query: 184 CEWATDSIRVNAVSPWAVNT---------QISPPDLNDLLVQEYVKLIAKT--PLARSAE 232
            +     I VNAV+P  + T             PDL    +++   + A      A   +
Sbjct: 187 HDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLK 246

Query: 233 PNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
           P E++  V FL   A+S+ITG V+ ID G TA
Sbjct: 247 PEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  182 bits (464), Expect = 8e-57
 Identities = 72/263 (27%), Positives = 117/263 (44%), Gaps = 24/263 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +     ALVTG T GIG  I   L + G  V  C R +  +   ++E    G +  G  C
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNA------ALVVMKRATEYTLEEYSSVMSTNV 128
           D+    + E L+  V   + G +++LVNNA      A   +        E +  V+ TN+
Sbjct: 79  DVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELAD------ELWLDVVETNL 131

Query: 129 ESSYHLCQLA---HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
              + + +       +L+  G   IV ++S  G   +   + Y+ASK  +   TK L  E
Sbjct: 132 TGVFRVTKQVLKAGGMLER-GTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLE 190

Query: 186 WATDSIRVNAVSPWAVNTQI-----SPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISP 238
            A   I VNAV P  V T +             +  E     + A+ P+ R  +P+E++ 
Sbjct: 191 LARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 250

Query: 239 LVAFLCLPAASYITGQVISIDGG 261
           +VA+L  P A+ +T Q +++ GG
Sbjct: 251 MVAYLIGPGAAAVTAQALNVCGG 273

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  183 bits (467), Expect = 8e-57
 Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 25/273 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV---HTCGRDQNM---------INERIQEWE 63
           L+G  A +TG  RG G      LA+ GA +     C +  N+         + E ++  E
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 64  SKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV 123
            +G ++     D+      + +++   + F G ++ILV+N  +         T +++S +
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDI 162

Query: 124 MSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
           + TN+  ++H C+   P +   G   S++F+SS  G    P  S YAASK  +  L  +L
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSL 222

Query: 183 ACEWATDSIRVNAVSPWAVNT---------QISPPDLNDLLVQEYVKLIAKTPL--ARSA 231
           A E    +IRVN+V+P AVNT         ++  P L +   ++  +L ++  L      
Sbjct: 223 ANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWV 282

Query: 232 EPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
           EP ++S  VA+L    A YI G  I +DGG  A
Sbjct: 283 EPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  181 bits (461), Expect = 8e-57
 Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 8/247 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G TALVTG  +GIG AI   LA  GA+V     +              G K      D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAAD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S     + L   + ++  G ++ILVNNA++V      +  L+ +  ++  N+  ++ + 
Sbjct: 61  ISDPGSVKALFAEIQALT-GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119

Query: 136 QLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           +     +  A     ++ ++S       P ++AY A+KG +   T+ LA E    +I  N
Sbjct: 120 RAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITAN 179

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
           AV+P  + +              +V+++    +    +P  I+ +V+FL    A +ITGQ
Sbjct: 180 AVTPGLIESDGVK-ASPHNEAFGFVEML--QAMKGKGQPEHIADVVSFLASDDARWITGQ 236

Query: 255 VISIDGG 261
            +++D G
Sbjct: 237 TLNVDAG 243

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  181 bits (463), Expect = 9e-57
 Identities = 73/252 (28%), Positives = 115/252 (45%), Gaps = 10/252 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVC 74
                 LVTGG+RGIG A+    AR G  V      ++   +  +      G +      
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYH 133
           D+        +   V   F G+L+ LVNNA +V   +R  E ++E    ++  NV  S  
Sbjct: 84  DVGNAADIAAMFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSIL 142

Query: 134 LCQLAHPLLKASGNA---SIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWATD 189
               A   +    +    +IV +SS+A  + S  +   YAASK AI+  T  LA E A +
Sbjct: 143 CAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            IRVNAV P  + T +          +E    +   P+ R+  P E++  + +L  P+AS
Sbjct: 203 GIRVNAVRPGIIETDLHASGGLPDRAREMAPSV---PMQRAGMPEEVADAILYLLSPSAS 259

Query: 250 YITGQVISIDGG 261
           Y+TG ++++ GG
Sbjct: 260 YVTGSILNVSGG 271

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  181 bits (462), Expect = 1e-56
 Identities = 65/272 (23%), Positives = 105/272 (38%), Gaps = 30/272 (11%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWES-KGFKVTGS 72
           +     A++TGG R IG++I   L + G  V       +      + E  + +       
Sbjct: 8   ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLC 67

Query: 73  VCDLS----FGDQREKLIETVSSVFDGKLNILVNNA-----------ALVVMKRATEYTL 117
             DLS      D  E +I+     F G+ ++LVNNA                    +   
Sbjct: 68  KGDLSLSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPID 126

Query: 118 EEYSSVMSTNVESSYHLCQLAHPLLKASGNA-----SIVFMSSVAGAISIPRLSAYAASK 172
            + + +  +N  +   L +         G       S+V +      + +P    Y  +K
Sbjct: 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAK 186

Query: 173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-SA 231
            A+  LT+  A E A   IRVNAV+P        PP +     +EY + +   PL +  A
Sbjct: 187 HALGGLTRAAALELAPRHIRVNAVAPGLSLL---PPAMPQETQEEYRRKV---PLGQSEA 240

Query: 232 EPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
              +I+  +AFL    A YITG  + +DGG  
Sbjct: 241 SAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  182 bits (463), Expect = 1e-56
 Identities = 83/268 (30%), Positives = 116/268 (43%), Gaps = 21/268 (7%)

Query: 3   EAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW 62
           E+AEP      + L   + LVTGGT+GIG  I    AR GA+V    R    ++    E 
Sbjct: 26  ESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAEL 85

Query: 63  -ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNA------ALVVMKRATEY 115
            E     V G   D+S          TV   F G L+++  NA       L  M      
Sbjct: 86  GELGAGNVIGVRLDVSDPGSCADAARTVVDAF-GALDVVCANAGIFPEARLDTMTP---- 140

Query: 116 TLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-IPRLSAYAASKGA 174
             E+ S V+  NV+ + +  Q     L ASG   ++  SS+ G ++  P  S Y ASK A
Sbjct: 141 --EQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAA 198

Query: 175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEP 233
                +  A E A   + VNA+ P  + T     +    + +EY+  +    P+     P
Sbjct: 199 QLGFMRTAAIELAPRGVTVNAILPGNILT-----EGLVDMGEEYISGMARSIPMGMLGSP 253

Query: 234 NEISPLVAFLCLPAASYITGQVISIDGG 261
            +I  L AFL    A YITGQ I +DGG
Sbjct: 254 VDIGHLAAFLATDEAGYITGQAIVVDGG 281

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  181 bits (461), Expect = 2e-56
 Identities = 50/246 (20%), Positives = 90/246 (36%), Gaps = 13/246 (5%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
                 A+VTG   G+G A+   LA  G  V   GR  + + E   E    G        
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPT 81

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYH 133
           D++  D    L       F G++++L NNA          + T  ++  V+ TN+   + 
Sbjct: 82  DVTDPDSVRALFTATVEKF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFL 140

Query: 134 LCQLAHPLLKASGNAS--IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
             Q A  ++KA       I+   S++     P  + Y A+K AI  LTK+ + +     I
Sbjct: 141 CTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDI 200

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC-LPAASY 250
               +     +T      +   +     +      +    +   ++  V ++  LP  + 
Sbjct: 201 ACGQIDIGNADT-----PMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDAN 255

Query: 251 ITGQVI 256
           +    I
Sbjct: 256 VQFMTI 261

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  182 bits (463), Expect = 2e-56
 Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 28/275 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV---HTCGRDQNMIN---------ERIQEWE 63
           + G  A +TG  RG G +    LAR GA +     C +   +           E +++ E
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 64  SKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVM-KRATEYTLEEYSS 122
           + G ++  S  D+   D  +  ++   +   G+L+I++ NAAL     R      + +  
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRD 144

Query: 123 VMSTNVESSYHLCQLAHP-LLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN 181
           ++  N+  ++   ++A P ++      SIVF SS+ G      +  Y ASK  ++ L + 
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204

Query: 182 LACEWATDSIRVNAVSPWAVNT---------QISPPDLNDLLVQEYV---KLIAKTPLAR 229
           +A E    +IRVN V P +V T         ++  PDL +  V+++    + +   P+  
Sbjct: 205 MALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPY 264

Query: 230 SAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
             EP +IS  + FL    A YITG  + +DGG   
Sbjct: 265 -VEPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  181 bits (462), Expect = 2e-56
 Identities = 67/272 (24%), Positives = 102/272 (37%), Gaps = 30/272 (11%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQE-WESKGFKVTGS 72
            +    A+VTG  + IG AI  +L + G  V                E  + +       
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVC 79

Query: 73  VCDLS----FGDQREKLIETVSSVFDGKLNILVNNA------ALVVMKR----ATEYTLE 118
             DL+         E++I +    F G+ ++LVNNA       LV          +    
Sbjct: 80  QADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 138

Query: 119 EYSSVMSTNVESSYHLCQLAHPLLKASGNA------SIVFMSSVAGAISIPRLSAYAASK 172
           + + ++ TN  + + L        K +         SIV +            S Y   K
Sbjct: 139 QVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGK 198

Query: 173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-SA 231
            A+  LT++ A E A   IRVN V+P        P  + +       K   K PL R  A
Sbjct: 199 HALVGLTQSAALELAPYGIRVNGVAPGVSLL---PVAMGEEEKD---KWRRKVPLGRREA 252

Query: 232 EPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
              +I+  V FL   +A YITG +I +DGG +
Sbjct: 253 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  180 bits (459), Expect = 2e-56
 Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 24/257 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
            L+G TA+VTG +RG+G AI  +L   GA++          ++   +E+++ G  V  + 
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTN 127
            D+   +  E +++T    F G+++ILVNNA       ++ M        +++  V++TN
Sbjct: 62  GDVKNPEDVENMVKTAMDAF-GRIDILVNNAGITRDTLMLKMSE------KDWDDVLNTN 114

Query: 128 VESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
           ++S+Y   +     +LK  SG   I+ ++S+AG I     + YAASK  +   TK++A E
Sbjct: 115 LKSAYLCTKAVSKIMLKQKSG--KIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKE 172

Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLC 244
           +A   I  NAV+P  + T     D+ D+L  +     +   PL R   P E++ +V FL 
Sbjct: 173 FAAKGIYCNAVAPGIIKT-----DMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLA 227

Query: 245 LPAASYITGQVISIDGG 261
              ++YITGQVI+IDGG
Sbjct: 228 SDDSNYITGQVINIDGG 244

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  179 bits (458), Expect = 2e-56
 Identities = 79/256 (30%), Positives = 132/256 (51%), Gaps = 24/256 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVC 74
           L+G  ALVTG +RGIG AI  +LA+ GA+V      ++   NE + E +  G        
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           D++  +    +++    VF G+++ILVNNA       L+ MK       EE+ +V++TN+
Sbjct: 62  DVANAEDVTNMVKQTVDVF-GQVDILVNNAGVTKDNLLMRMKE------EEWDTVINTNL 114

Query: 129 ESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           +  +   +     +++   G   IV ++SV G    P  + Y A+K  +  LTK  A E 
Sbjct: 115 KGVFLCTKAVSRFMMRQRHG--RIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKEL 172

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCL 245
           A+ +I VNA++P  + T     D+ D+L +    +++   P A+  E  +I+  V F   
Sbjct: 173 ASRNITVNAIAPGFIAT-----DMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFAS 227

Query: 246 PAASYITGQVISIDGG 261
             + YITGQ +++DGG
Sbjct: 228 DQSKYITGQTLNVDGG 243

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  179 bits (458), Expect = 2e-56
 Identities = 85/256 (33%), Positives = 136/256 (53%), Gaps = 24/256 (9%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVC 74
               +ALVTG +RGIG +I  +LA  G +V       +      ++E ++KG        
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           +++  D+ + +I+ V S F G L++LVNNA       L+ MK       +E+  V+ TN+
Sbjct: 62  NVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKE------QEWDDVIDTNL 114

Query: 129 ESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           +  ++  Q A   +L+  SG  +I+ +SSV GA+  P  + Y A+K  +  LTK+ A E 
Sbjct: 115 KGVFNCIQKATPQMLRQRSG--AIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAAREL 172

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCL 245
           A+  I VNAV+P  + +     D+ D L  E   +++ + PLAR  +  +I+  VAFL  
Sbjct: 173 ASRGITVNAVAPGFIVS-----DMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLAS 227

Query: 246 PAASYITGQVISIDGG 261
             A YITGQ I ++GG
Sbjct: 228 DKAKYITGQTIHVNGG 243

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  181 bits (461), Expect = 3e-56
 Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 32/279 (11%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV----------------HTCGRDQNMINERI 59
           + G  A VTG  RG G +    LA+ GA +                         + E  
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 60  QEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT-EYTLE 118
              +    ++  +  D+   D  +  +++      G+L+I+V NA +        + + E
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEE 127

Query: 119 EYSSVMSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQ 177
           +++ ++  N+   +   +   P + A G   SI+  SSV G  + P    Y A+K  +  
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNT---------QISPPDLNDLL---VQEYVKLIAKT 225
           L +    E     IRVN+V P  V T         ++  PDL +     +    ++    
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL 247

Query: 226 PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
           P+    EP +IS  V F     A YITG  + ID G   
Sbjct: 248 PIPW-VEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  180 bits (459), Expect = 3e-56
 Identities = 92/257 (35%), Positives = 131/257 (50%), Gaps = 26/257 (10%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSV 73
            L    ALVTG +RGIG AI  ELA  GA V           +E +    + G +     
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTN 127
            D+S   + E L   V   + G+L++LVNNA       L+ MKR      +++ SV+  N
Sbjct: 85  ADVSQESEVEALFAAVIERW-GRLDVLVNNAGITRDTLLLRMKR------DDWQSVLDLN 137

Query: 128 VESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
           +   +   + A   +LK  SG   I+ ++SV G +  P  + Y+A+K  +  LTK +A E
Sbjct: 138 LGGVFLCSRAAAKIMLKQRSG--RIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKE 195

Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL 245
            A+  I VNAV+P  + T     D+   L  E  KL+   PL R  E  E++ +V FL  
Sbjct: 196 LASRGITVNAVAPGFIAT-----DMTSELAAE--KLLEVIPLGRYGEAAEVAGVVRFLAA 248

Query: 246 -PAASYITGQVISIDGG 261
            PAA+YITGQVI+IDGG
Sbjct: 249 DPAAAYITGQVINIDGG 265

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  179 bits (455), Expect = 4e-56
 Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 28/255 (10%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S      LV GG   +G   V+        V +    +N       E  S    V  +  
Sbjct: 4   SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-------EEASASVIVKMTDS 56

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYH 133
                DQ    +  +    D K++ ++  A         ++   +    +   ++ +S  
Sbjct: 57  FTEQADQVTAEVGKLLG--DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTI 114

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS--I 191
              LA   LK  G   +    + A     P +  Y  +KGA++QL ++LA + +      
Sbjct: 115 SSHLATKHLKEGG--LLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
              AV P  ++T ++   + +               +       +               
Sbjct: 173 AAIAVLPVTLDTPMNRKSMPE------------ADFSSWTPLEFLVETFHDWITGNKRPN 220

Query: 252 TGQVISI--DGGYTA 264
           +G +I +    G T 
Sbjct: 221 SGSLIQVVTTDGKTE 235

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  178 bits (455), Expect = 8e-56
 Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 24/257 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGSV 73
            L+G  +LVTG TRGIG AI E+LA  G++V  T    +       +     G K  G  
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTN 127
            +L   +   K  E + ++    ++ILVNNA        + M         ++  V+  N
Sbjct: 64  MNLLSEESINKAFEEIYNLV-DGIDILVNNAGITRDKLFLRMSL------LDWEEVLKVN 116

Query: 128 VESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
           +  ++ + Q +   ++K   G   IV +SSV G         Y+ +K  +   TK+LA E
Sbjct: 117 LTGTFLVTQNSLRKMIKQRWG--RIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKE 174

Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLC 244
            A  ++ VNAV+P  + T     D+  +L +E  +    + PL R   P E++ +V FLC
Sbjct: 175 LAPRNVLVNAVAPGFIET-----DMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLC 229

Query: 245 LPAASYITGQVISIDGG 261
              ASYITG+VI ++GG
Sbjct: 230 SELASYITGEVIHVNGG 246

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  178 bits (455), Expect = 2e-55
 Identities = 63/283 (22%), Positives = 100/283 (35%), Gaps = 39/283 (13%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV------------HTCGRDQNMINERIQEWE 63
           ++    LVTGG RG G +   +LA  GA +                     + E   E E
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 64  SKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV 123
             G K   +  D+       + +    + F GKL+++V NA   +        ++ ++  
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANAG--ICPLGAHLPVQAFADA 124

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG-----------AISIPRLSAYAASK 172
              +     +    A P L +    SI+   SVAG               P  + Y+ +K
Sbjct: 125 FDVDFVGVINTVHAALPYLTSGA--SIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182

Query: 173 GAINQLTKNLACEWATDSIRVNAVSPWAVNT----------QISPPDLNDLLVQEYVKLI 222
             ++  T  LA + A  SIR N + P  VNT          Q  P           +   
Sbjct: 183 QLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFP 242

Query: 223 AKTPL-ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
           A   +     E ++IS  V FL    + Y+TG    +D G   
Sbjct: 243 AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  176 bits (449), Expect = 8e-55
 Identities = 63/259 (24%), Positives = 96/259 (37%), Gaps = 22/259 (8%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSV 73
           + G  ALVTG  +GIG A  E L   GA V     +     +       +    K     
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CD++   Q       V   F G+L+ILVNNA +           + +   +  N+ S   
Sbjct: 65  CDVADQQQLRDTFRKVVDHF-GRLDILVNNAGVN--------NEKNWEKTLQINLVSVIS 115

Query: 134 LCQLAHPLLKASGN---ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKN--LACEWAT 188
              L    +          I+ MSS+AG + + +   Y ASK  I   T++  LA     
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 175

Query: 189 DSIRVNAVSPWAVNTQI---SPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLC 244
             +R+NA+ P  VNT I      + N     EY   +          +P  I+  +  L 
Sbjct: 176 SGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 235

Query: 245 LPAASYITGQVISIDGGYT 263
              A  + G ++ I     
Sbjct: 236 EDDA--LNGAIMKITTSKG 252

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  176 bits (449), Expect = 1e-54
 Identities = 69/256 (26%), Positives = 119/256 (46%), Gaps = 26/256 (10%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G  ALVTG T GIG AI       GA V   G  ++ + E   +    G  V     
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---LGKDVFVFSA 80

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           +LS     ++L E         ++ILVNNA        V M+       +++  V++ N+
Sbjct: 81  NLSDRKSIKQLAEVAEREM-EGIDILVNNAGITRDGLFVRMQ------DQDWDDVLAVNL 133

Query: 129 ESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
            ++  L +   H +++   G   I+ ++S+ G +  P  + Y A+K  +   +K LA E 
Sbjct: 134 TAASTLTRELIHSMMRRRYG--RIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEI 191

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCL 245
           A+ +I VN ++P  + +      + D L ++  + ++A  P+ R     EI+    +L  
Sbjct: 192 ASRNITVNCIAPGFIKS-----AMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLAS 246

Query: 246 PAASYITGQVISIDGG 261
             A+Y+TGQ + I+GG
Sbjct: 247 DEAAYLTGQTLHINGG 262

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  176 bits (448), Expect = 1e-54
 Identities = 69/256 (26%), Positives = 126/256 (49%), Gaps = 22/256 (8%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGSV 73
            +    A VTGG  GIG +I + L + G  V   CG +     + +++ ++ GF    S 
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE 69

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTN 127
            ++   D  ++  + V +   G++++LVNNA          M R      E++ +V+ TN
Sbjct: 70  GNVGDWDSTKQAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTR------EDWQAVIDTN 122

Query: 128 VESSYHLCQ-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           + S +++ + +   +++  G   I+ +SSV G       + Y+ +K  I+  T +LA E 
Sbjct: 123 LTSLFNVTKQVIDGMVER-GWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEV 181

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCL 245
           AT  + VN VSP  + T     D+   +  + + K++A  P+ R   P+EI  +VA+L  
Sbjct: 182 ATKGVTVNTVSPGYIGT-----DMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLAS 236

Query: 246 PAASYITGQVISIDGG 261
             + + TG   S++GG
Sbjct: 237 EESGFSTGADFSLNGG 252

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  175 bits (446), Expect = 2e-54
 Identities = 82/256 (32%), Positives = 127/256 (49%), Gaps = 26/256 (10%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L G  ALVTG +RGIG AI E LA  GA V      ++            G    G   
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNGKGMAL 62

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           +++  +  E +++ ++  F G ++ILVNNA       L+ MK       EE+S +M TN+
Sbjct: 63  NVTNPESIEAVLKAITDEF-GGVDILVNNAGITRDNLLMRMKE------EEWSDIMETNL 115

Query: 129 ESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
            S + L +     ++K   G   I+ + SV G +     + YAA+K  +   TK++A E 
Sbjct: 116 TSIFRLSKAVLRGMMKKRQG--RIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREV 173

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCL 245
           A+  + VN V+P  + T     D+   L  E     +A+ P  R  +P EI+  VAFL  
Sbjct: 174 ASRGVTVNTVAPGFIET-----DMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLAS 228

Query: 246 PAASYITGQVISIDGG 261
           P A+YITG+ + ++GG
Sbjct: 229 PEAAYITGETLHVNGG 244

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  175 bits (445), Expect = 3e-54
 Identities = 61/252 (24%), Positives = 99/252 (39%), Gaps = 10/252 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            + G   +VTG +RGIG  I  +L + GA+V+  GR  + +    QE +S G +    VC
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT-------EYTLEEYSSVMSTN 127
           D S   +   L E V     G+L++LVNNA   V            E     +  + +  
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           +   Y        L+  +G   IV +SS      +  +  Y   K A ++L  + A E  
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNV-PYGVGKAACDKLAADCAHELR 180

Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAE-PNEISPLVAFLCL- 245
              +   ++ P  V T++    +    V +   L        SAE        V  L   
Sbjct: 181 RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATD 240

Query: 246 PAASYITGQVIS 257
           P    ++G+V+ 
Sbjct: 241 PNILSLSGKVLP 252

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  175 bits (445), Expect = 4e-54
 Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 18/245 (7%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL G  A+VTG +RGIG AI  +L   GA V    RD   +    +E  + G +     C
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT---EYTLEEYSSVMSTNVESS 131
           DLS  D        V +   G+ ++LVNNA   V             E+ ++++ N+++ 
Sbjct: 86  DLSHSDAIAAFATGVLAAH-GRCDVLVNNAG--VGWFGGPLHTMKPAEWDALIAVNLKAP 142

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           Y L +   P + A+    I+ +SS+AG   +   +AY ASK  +N L  + A E     +
Sbjct: 143 YLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQV 202

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RV+ V+P +V T     +           L AK     + EP++I+ +VA L   A    
Sbjct: 203 RVSLVAPGSVRT-----EFGV-------GLSAKKSALGAIEPDDIADVVALLATQADQSF 250

Query: 252 TGQVI 256
             +V+
Sbjct: 251 ISEVL 255

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  175 bits (445), Expect = 4e-54
 Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 23/256 (8%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGSVC 74
                A VTGG  G+G AI   L   G +V  +     + ++  +      G        
Sbjct: 23  QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV 82

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           D++  +  E+  E V + F GK+++L+NNA        + M +       ++ +VM T++
Sbjct: 83  DVADFESCERCAEKVLADF-GKVDVLINNAGITRDATFMKMTK------GDWDAVMRTDL 135

Query: 129 ESSYHLCQ-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
           ++ +++ +     +++      IV + SV G+      + YA++K  I+  TK LA E A
Sbjct: 136 DAMFNVTKQFIAGMVER-RFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETA 194

Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCL 245
              I VN VSP  + T      + + + Q+ ++  ++ + P+ R   P+E++ L+AFLC 
Sbjct: 195 KRGITVNTVSPGYLAT-----AMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCS 249

Query: 246 PAASYITGQVISIDGG 261
             A ++TG  ++I+GG
Sbjct: 250 DDAGFVTGADLAINGG 265

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  174 bits (443), Expect = 4e-54
 Identities = 77/253 (30%), Positives = 123/253 (48%), Gaps = 25/253 (9%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESKGFKVTGSVCDLSF 78
             +VTG +RGIG AI   L + G  V     R      E  ++ E+ G +      D+S 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNVESSY 132
               E +++T    + G ++++VNNA       L+ MK+       ++  V+  N+   +
Sbjct: 63  EADVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKK------SQWDEVIDLNLTGVF 115

Query: 133 HLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
              Q A   ++K   G   I+ ++SV G I     + YAA+K  +   +K  A E A+ +
Sbjct: 116 LCTQAATKIMMKKRKG--RIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRN 173

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCL-PAA 248
           I VN V P  + +     D+   L ++   K++   PL R+ +P  ++ LV FL L PAA
Sbjct: 174 INVNVVCPGFIAS-----DMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAA 228

Query: 249 SYITGQVISIDGG 261
           SYITGQ  +IDGG
Sbjct: 229 SYITGQAFTIDGG 241

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  174 bits (443), Expect = 6e-54
 Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT---- 70
            LR   ALVTG   GIG A+   LA  GA+V  C  D+    E ++     G K      
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63

Query: 71  ---GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYS 121
                  D+S       L+E V + F    +++V+ A       L+ M        +++ 
Sbjct: 64  NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSE------DDWD 117

Query: 122 SVMSTNVESSYHLCQLA-HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
            V++ N++ ++ + Q A   L+      SI+ +SS+ G +     + YAASK  +  LT+
Sbjct: 118 KVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQ 177

Query: 181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
             A E     IR N+V P  + T ++   +   +V +  ++I   P+    +P +++ +V
Sbjct: 178 TAARELGRHGIRCNSVLPGFIATPMTQ-KVPQKVVDKITEMI---PMGHLGDPEDVADVV 233

Query: 241 AFLCLPAASYITGQVISIDGG 261
           AFL    + YITG  + + GG
Sbjct: 234 AFLASEDSGYITGTSVEVTGG 254

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  173 bits (442), Expect = 1e-53
 Identities = 63/272 (23%), Positives = 103/272 (37%), Gaps = 28/272 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV------------HTCGRDQNMINERIQEWE 63
           L G  A +TG  RG G A    LA  GA +                     +   ++  E
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 64  SKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV 123
             G ++     D+   +     ++       G+L+I+V NA +  M        + +  V
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDEL-GRLDIVVANAGIAPM----SAGDDGWHDV 125

Query: 124 MSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSVAG----AISIPRLSAYAASKGAINQL 178
           +  N+   YH  ++A P L   G   SIV +SS AG      + P    Y A+K  +  L
Sbjct: 126 IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGL 185

Query: 179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ------EYVKLIAKTPLARSAE 232
            +  A   A   IRVN++ P  V T +   +     +       +    +          
Sbjct: 186 MRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLA 245

Query: 233 PNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
           P +++  VA+L    A YITG  + +D G+  
Sbjct: 246 PEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  171 bits (437), Expect = 3e-53
 Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 35/257 (13%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            +R    LV   +RGIG A+ + L++ GA V  C R++ ++      +          VC
Sbjct: 16  GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV---------VC 66

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNA------ALVVMKRATEYTLEEYSSVMSTNV 128
           DL       K ++ +      +++ILV NA          +        E++   + +  
Sbjct: 67  DLR------KDLDLLFEKV-KEVDILVLNAGGPKAGFFDELTN------EDFKEAIDSLF 113

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            +   + +   P +K  G   IV ++S +    I  L    +++ A+    K L+ E A 
Sbjct: 114 LNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP 173

Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLP 246
             I VN V+P    T     +    L+ E  K  + ++ P+ R A+P EI+ +VAFLC  
Sbjct: 174 YGITVNCVAPGWTET-----ERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSE 228

Query: 247 AASYITGQVISIDGGYT 263
            ASY+TGQ I +DGG +
Sbjct: 229 KASYLTGQTIVVDGGLS 245

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  171 bits (437), Expect = 4e-53
 Identities = 78/255 (30%), Positives = 116/255 (45%), Gaps = 32/255 (12%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S    + LVTGG RGIG AI    A  G  V    R                       C
Sbjct: 18  SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRS-----------GEPPEGFLAVKC 66

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           D++  +Q E+  + +     G + +L+ NA       L+ M        E+++SV+ TN+
Sbjct: 67  DITDTEQVEQAYKEIEETH-GPVEVLIANAGVTKDQLLMRMSE------EDFTSVVETNL 119

Query: 129 ESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
             ++ + + A   +L+A  G   +V +SSV G +     + YAASK  +    ++LA E 
Sbjct: 120 TGTFRVVKRANRAMLRAKKG--RVVLISSVVGLLGSAGQANYAASKAGLVGFARSLAREL 177

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
            + +I  N V+P  V+T ++   L D      V  +   PL R A P EI+  V FL   
Sbjct: 178 GSRNITFNVVAPGFVDTDMTK-VLTDEQRANIVSQV---PLGRYARPEEIAATVRFLASD 233

Query: 247 AASYITGQVISIDGG 261
            ASYITG VI +DGG
Sbjct: 234 DASYITGAVIPVDGG 248

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  171 bits (436), Expect = 5e-53
 Identities = 80/253 (31%), Positives = 123/253 (48%), Gaps = 25/253 (9%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFK-VTGSVCDLS 77
            AL+TG +RGIG AI   LA  G ++    G+++    E  +E   +G   V     +L 
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNVESS 131
             +    L+   + V  G L+ LVNNA       LV MK       E++ +V+  N+ + 
Sbjct: 63  EAEAATALVHQAAEVL-GGLDTLVNNAGITRDTLLVRMKD------EDWEAVLEANLSAV 115

Query: 132 YHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           +   + A   ++KA  G   IV ++SV G +  P  + Y ASK  +   T+ +A E+A  
Sbjct: 116 FRTTREAVKLMMKARFG--RIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQR 173

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAA 248
            I VNAV+P  + T     ++ + L QE     + + P  R   P E++  VAFL    A
Sbjct: 174 GITVNAVAPGFIET-----EMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKA 228

Query: 249 SYITGQVISIDGG 261
            YITGQ + +DGG
Sbjct: 229 GYITGQTLCVDGG 241

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  171 bits (435), Expect = 7e-53
 Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 32/255 (12%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
                + LVTGG RGIG AI + LA  G  V    R                  + G   
Sbjct: 12  PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-----------SGAPKGLFGVEV 60

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           D++  D  ++    V     G + +LV+NA       L+ M        E++  V++ N+
Sbjct: 61  DVTDSDAVDRAFTAVEEHQ-GPVEVLVSNAGLSADAFLMRMTE------EKFEKVINANL 113

Query: 129 ESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
             ++ + Q A   + +   G   ++F+ SV+G   I   + YAASK  +  + +++A E 
Sbjct: 114 TGAFRVAQRASRSMQRNKFG--RMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIAREL 171

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
           +  ++  N V+P  ++T ++   L++ + Q  ++ I   P  R   P E++ +V+FL   
Sbjct: 172 SKANVTANVVAPGYIDTDMTR-ALDERIQQGALQFI---PAKRVGTPAEVAGVVSFLASE 227

Query: 247 AASYITGQVISIDGG 261
            ASYI+G VI +DGG
Sbjct: 228 DASYISGAVIPVDGG 242

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  172 bits (438), Expect = 7e-53
 Identities = 63/288 (21%), Positives = 104/288 (36%), Gaps = 45/288 (15%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESK-GFKVTGS 72
           +     ALVTG  + +G +I E L   G +V     R     N       ++        
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65

Query: 73  VCDLS-----------------FGDQREKLIETVSSVFDGKLNILVNNA------ALVVM 109
             DLS                    +  +L+    + + G+ ++LVNNA       L+  
Sbjct: 66  QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 124

Query: 110 KRA--------TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNA------SIVFMSS 155
                       E      + +  +N  + Y L +     +  +         SI+ M  
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 156 VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV 215
                 +   + Y  +KGA+  LT++ A E A   IRVN V P          D+   + 
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL---VDDMPPAVW 241

Query: 216 QEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
           + +   +      R +   E+S +V FLC   A YITG  + +DGGY+
Sbjct: 242 EGHRSKV--PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  173 bits (440), Expect = 1e-52
 Identities = 63/288 (21%), Positives = 104/288 (36%), Gaps = 45/288 (15%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESK-GFKVTGS 72
           +     ALVTG  + +G +I E L   G +V     R     N       ++        
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102

Query: 73  VCDLS-----------------FGDQREKLIETVSSVFDGKLNILVNNA------ALVVM 109
             DLS                    +  +L+    + + G+ ++LVNNA       L+  
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 161

Query: 110 KRA--------TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNA------SIVFMSS 155
                       E      + +  +N  + Y L +     +  +         SI+ M  
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

Query: 156 VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV 215
                 +   + Y  +KGA+  LT++ A E A   IRVN V P          D+   + 
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL---VDDMPPAVW 278

Query: 216 QEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
           + +   +      R +   E+S +V FLC   A YITG  + +DGGY+
Sbjct: 279 EGHRSKV--PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  170 bits (434), Expect = 1e-52
 Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 30/256 (11%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G T+L+TG + GIG AI   L + G+ V   G ++  +              T  VC
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA---LKDNYTIEVC 67

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           +L+  ++   LI          L+ILV NA        + MK       +++  V+  N+
Sbjct: 68  NLANKEECSNLISKT-----SNLDILVCNAGITSDTLAIRMK------DQDFDKVIDINL 116

Query: 129 ESSYHLCQLA-HPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           ++++ L + A   +++   G   I+ +SS+ G    P  + Y ASK  +  +TK+L+ E 
Sbjct: 117 KANFILNREAIKKMIQKRYG--RIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEV 174

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCL 245
           AT  I VNAV+P  + +     D+ D L ++  + ++ K PL     P +++  VAFL  
Sbjct: 175 ATRGITVNAVAPGFIKS-----DMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLAS 229

Query: 246 PAASYITGQVISIDGG 261
             ASYITGQ + ++GG
Sbjct: 230 NNASYITGQTLHVNGG 245

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  170 bits (433), Expect = 2e-52
 Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 17/259 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARF---GASVHTCGRDQNMINERIQEWESK--GFKV 69
            L     ++TG +RG G A+  +LAR    G+ +    R ++M+ +  +E  ++    KV
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 70  TGSVCDLSFGDQREKLIETVSSVFD---GKLNILVNNAAL---VVMKRATEYTLEEYSSV 123
             +  DL      ++L+  V  +      +  +L+NNAA    V         L E ++ 
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 124 MSTNVESSYHLCQLAHPLLKASGNA--SIVFMSSVAGAISIPRLSAYAASKGAINQLTKN 181
            + N+ S   L        + S     ++V +SS+           Y A K A + L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 182 LACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLV 240
           LA E    S+RV + +P  ++  +           E    L          +    +  +
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240

Query: 241 AFLCLPAASYITGQVISID 259
             L L   ++ +G  +   
Sbjct: 241 LGL-LQKDTFQSGAHVDFY 258

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  169 bits (430), Expect = 2e-52
 Identities = 46/248 (18%), Positives = 88/248 (35%), Gaps = 19/248 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           +     +VTG   G+G A+   L   G  V   GR    + ++       G  V G V D
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVAD 57

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           L+  +  +           G   ++++ A          YT E+   VM +N+ S+  + 
Sbjct: 58  LAHHEDVDVAFAAAVEWG-GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           Q    L+   G   +  + S A  +     S Y ASK  +    ++L  E     +R+  
Sbjct: 117 QQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVN 175

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF-LCLPAASYITGQ 254
           + P  + +             E+         +    P + +  +   L   ++ ++T  
Sbjct: 176 LYPSGIRS-------------EFWDNTDHVDPSGFMTPEDAAAYMLDALEARSSCHVTDL 222

Query: 255 VISIDGGY 262
            I  + G+
Sbjct: 223 FIGRNEGH 230

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  166 bits (422), Expect = 4e-51
 Identities = 38/251 (15%), Positives = 91/251 (36%), Gaps = 29/251 (11%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           +     +V GG   +G AI+E   + G +V                   +         +
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA----------NDQADSNILVDGN 50

Query: 76  LSFGDQREKLIETVSSVFD-GKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYH 133
            ++ +Q + ++E  +S     +++ +   A        +++  ++    ++  +V SS  
Sbjct: 51  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT--DSI 191
             +LA   LK  G   +    + A     P +  Y  +K A++ LT +LA + +   D+ 
Sbjct: 111 AAKLATTHLKPGG--LLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNS 168

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL-PAASY 250
            V  + P  ++T ++   + +               +     + IS  +       ++  
Sbjct: 169 AVLTIMPVTLDTPMNRKWMPN------------ADHSSWTPLSFISEHLLKWTTETSSRP 216

Query: 251 ITGQVISIDGG 261
            +G ++ I   
Sbjct: 217 SSGALLKITTE 227

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  165 bits (420), Expect = 1e-50
 Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 25/254 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L+    L+TG   GIG A +E  A+ GA +  C  ++  + E  +   +          
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV-----M 56

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           D++     E+      +   G+L+ +V+ A          M       LE++  V+  N+
Sbjct: 57  DVADPASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMP------LEDWELVLRVNL 109

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
             S+ + + A   ++     SIV  +S    +     + YAAS   +  LT+ LA E   
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGR 168

Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPA 247
             IRVN ++P  + T      +   + ++  +  IA TPL R+ +P E++    FL    
Sbjct: 169 WGIRVNTLAPGFIET-----RMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE 223

Query: 248 ASYITGQVISIDGG 261
           +S+ITGQV+ +DGG
Sbjct: 224 SSFITGQVLFVDGG 237

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  164 bits (416), Expect = 6e-49
 Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 26/258 (10%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV-------HTCGRDQNMINERIQEWESKGF 67
            L G T  +TG +RGIG AI  + A+ GA++           +    I    +E E+ G 
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
           K    + D+    Q    +E     F G ++ILVNNA+ + +    +   +    +M+ N
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVN 160

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAG--AISIPRLSAYAASKGAINQLTKNLACE 185
              +Y   +   P LK S  A I+ +S       +   +  AY  +K  ++     +A E
Sbjct: 161 TRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEE 220

Query: 186 WATDSIRVNAVSP-WAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
           +    I VNA+ P  A++T               + ++    +       +I    A+  
Sbjct: 221 FK-GEIAVNALWPKTAIHT-------------AAMDMLGGPGIESQCRKVDIIADAAYSI 266

Query: 245 LPAASYITGQVISIDGGY 262
                  TG  + ID   
Sbjct: 267 FQKPKSFTGNFV-IDENI 283

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  165 bits (419), Expect = 2e-48
 Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 21/253 (8%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A+VTG  RGIG  I E  AR GA+V     D     E ++   +     T    D
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA--EDLKR-VADKVGGTALTLD 267

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNVE 129
           ++  D  +K+   V+    GK++ILVNNA       L  M        + + +V++ N+ 
Sbjct: 268 VTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDE------KRWDAVIAVNLL 321

Query: 130 SSYHLCQ-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           +   L + L        G   ++ +SS+AG       + YA +K  +  L + LA   A 
Sbjct: 322 APQRLTEGLVGNGTIGEG-GRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLAD 380

Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
             I +NAV+P  + T+++   +     +   +L     L +  +P +++ L+A+   PA+
Sbjct: 381 KGITINAVAPGFIETKMTE-AIPLATREVGRRLN---SLFQGGQPVDVAELIAYFASPAS 436

Query: 249 SYITGQVISIDGG 261
           + +TG  I + G 
Sbjct: 437 NAVTGNTIRVCGQ 449

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  158 bits (402), Expect = 6e-48
 Identities = 38/255 (14%), Positives = 81/255 (31%), Gaps = 19/255 (7%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSV 73
            L     +      GIG     EL +          R +N       +  +    +T   
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 74  CDLSF-GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
            D++    + +KL++ +       ++IL+N A ++           +    ++ N     
Sbjct: 62  YDVTVPVAESKKLLKKIFDQL-KTVDILINGAGIL--------DDHQIERTIAINFTGLV 112

Query: 133 HLCQLAHPLL---KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           +            K      I  + SV G  +I ++  Y+ASK A+   T +LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            +   +++P    T +     + L V+   ++        +    +             +
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEP--RVAELLLSHPTQTSEQCGQNFVKA---IEA 227

Query: 250 YITGQVISIDGGYTA 264
              G +  +D G   
Sbjct: 228 NKNGAIWKLDLGTLE 242

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  157 bits (399), Expect = 2e-47
 Identities = 42/244 (17%), Positives = 84/244 (34%), Gaps = 9/244 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           + R  T  V G    IG  I ++ A  G +V    R+   +   + E E+ G ++     
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D    D+    +    +     L + + N    V     E T   +  V      + +  
Sbjct: 64  DARNEDEVTAFLNAADA--HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVS 121

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV- 193
            + +  L+ A G   I F  + A        +A+A++K  +  + +++A E    +I V 
Sbjct: 122 GRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVA 181

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL-PAASYIT 252
           + +    V+T            ++     A         P  ++     L   P +++  
Sbjct: 182 HLIIDSGVDT-----AWVRERREQMFGKDALANPDLLMPPAAVAGAYWQLYQQPKSAWTF 236

Query: 253 GQVI 256
              I
Sbjct: 237 EMEI 240

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  151 bits (384), Expect = 8e-46
 Identities = 50/241 (20%), Positives = 87/241 (36%), Gaps = 42/241 (17%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
            M  L+ G +  +G A+ E L +  A V T GR    +                   D++
Sbjct: 3   AMKILLIGASGTLGSAVKERLEK-KAEVITAGRHSGDV-----------------TVDIT 44

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
             D  +K+ E V     GK++ +V+          TE T E+ +  +S+ +    +L  L
Sbjct: 45  NIDSIKKMYEQV-----GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLL 99

Query: 138 AHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVS 197
               L   G  S    + +     I + ++ A + GA+    K+ A E     IR+N VS
Sbjct: 100 GIDSLNDKG--SFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMP-RGIRINTVS 156

Query: 198 PWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
           P  +             ++ + +     P A+ A   E S              TG+   
Sbjct: 157 PNVLEESWDK-------LEPFFEGFLPVPAAKVARAFEKS---------VFGAQTGESYQ 200

Query: 258 I 258
           +
Sbjct: 201 V 201

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  151 bits (384), Expect = 3e-45
 Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 21/244 (8%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHT-------CGRDQNMINERIQEWESKGFKVTGS 72
             L+TG  +GIG AI  E AR                R    + +   E  ++G      
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             D+S      +L   +   + G ++ LVNNA +      ++ T E++   M+TN++ ++
Sbjct: 64  TADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
            L Q    L++   +  I F++SVA   +    S Y  SK     L + +       ++R
Sbjct: 123 FLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR 182

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           +  V P AV T      +   +  E               P +I+  V    L  +  + 
Sbjct: 183 ITDVQPGAVYT-----PMWGKVDDEMQA--------LMMMPEDIAAPVVQAYLQPSRTVV 229

Query: 253 GQVI 256
            ++I
Sbjct: 230 EEII 233

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  148 bits (376), Expect = 5e-44
 Identities = 52/256 (20%), Positives = 97/256 (37%), Gaps = 20/256 (7%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE---RIQEWESKGFKVTG 71
             +   A++TG ++GIG  I   LA  G  V    R +  + +    I        +   
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT-EYTLEEYSSVMSTNVES 130
              D++   + +  I+ +   + G ++ILVN AA+      +    ++ +  +M  NV +
Sbjct: 64  LPLDITDCTKADTEIKDIHQKY-GAVDILVNAAAM--FMDGSLSEPVDNFRKIMEINVIA 120

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
            Y + +    ++K   N  I  ++S A          Y ++K A+  L ++L  E A   
Sbjct: 121 QYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLG 180

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC-LPAAS 249
           IRV  + P  VNT     D+       +             +P+++   +  L  L    
Sbjct: 181 IRVTTLCPGWVNT-----DMAKKAGTPFKD-------EEMIQPDDLLNTIRCLLNLSENV 228

Query: 250 YITGQVISIDGGYTAG 265
            I   V  +      G
Sbjct: 229 CIKDIVFEMKKSIIEG 244

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  147 bits (374), Expect = 2e-43
 Identities = 56/261 (21%), Positives = 101/261 (38%), Gaps = 28/261 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G +A+V+GG  G+G A V  L   G  V               E    G +      +
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTN 84

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNA-----ALVVMKRATEYTLEEYSSVMSTNVES 130
           ++  D     IE  + +       +V +        +V +  +   +  ++  +   +  
Sbjct: 85  VTSEDSVLAAIEAANQLG-RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143

Query: 131 SYHLCQLAHPLLKAS------GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLAC 184
           +Y++ +L    + A+         ++V  +S+AG       +AYAA+K  +  LT   A 
Sbjct: 144 TYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAAR 203

Query: 185 EWATDSIRVNAVSPWAVNTQIS---PPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLV 240
           + ++  IRVN ++P  + T I      +          K  A  P   R   P+E +   
Sbjct: 204 DLSSAGIRVNTIAPGTMKTPIMESVGEEALA-------KFAANIPFPKRLGTPDEFADAA 256

Query: 241 AFLCLPAASYITGQVISIDGG 261
           AFL      YI G+V+ +DG 
Sbjct: 257 AFLL--TNGYINGEVMRLDGA 275

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  147 bits (373), Expect = 2e-43
 Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 4/197 (2%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           ++ S+ G   L+TG   GIG     E A+  + +     +++ + E   + +  G KV  
Sbjct: 25  RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHT 84

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
            V D S  +      + V +   G ++ILVNNA +V           +       NV + 
Sbjct: 85  FVVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAH 143

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT--- 188
           +   +   P +  + +  IV ++S AG +S+P L AY +SK A     K L  E A    
Sbjct: 144 FWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 203

Query: 189 DSIRVNAVSPWAVNTQI 205
             ++   + P  VNT  
Sbjct: 204 TGVKTTCLCPNFVNTGF 220

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  145 bits (369), Expect = 4e-43
 Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 20/244 (8%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           SL+   A+VTG T G+G  IV++L+R    V+  GR+     E +    ++   V     
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHI-VYALGRNP----EHLAAL-AEIEGVEPIES 55

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+      E  ++ + ++    ++ LV+ AA+         ++ E+ + +  NV     L
Sbjct: 56  DIVKEVLEEGGVDKLKNL--DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAEL 113

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +   P L+A  +  +++++S AG    P  + YAASK A+  L      E A + IRV+
Sbjct: 114 SRQLLPALRA-ASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172

Query: 195 AVSPWAVNTQISPPDLNDLLV-QEYVKLIAKTPLARSAEPNEISPLVAFL-CLPAASYIT 252
            VSP   NT      +   L+  +      +  +    EP EI+  + F+      + IT
Sbjct: 173 TVSPGPTNT-----PMLQGLMDSQGTNFRPEIYI----EPKEIANAIRFVIDAGETTQIT 223

Query: 253 GQVI 256
              +
Sbjct: 224 NVDV 227

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  147 bits (372), Expect = 6e-43
 Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 5/198 (2%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVT 70
           +   L+G   +VTG ++GIG  +   LA+ GA V    R +  + + +      G     
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 81

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
                +      E+ +     +  G L++L+ N             +      M  N  S
Sbjct: 82  YIAGTMEDMTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 140

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
              L   A P+LK S   SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   
Sbjct: 141 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSR 199

Query: 191 --IRVNAVSPWAVNTQIS 206
             + +       ++T+ +
Sbjct: 200 VNVSITLCVLGLIDTETA 217

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  145 bits (369), Expect = 2e-42
 Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 15/246 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
              G  A+VTGG  GIG A   E AR GA +     DQ  + + +     +GF   G VC
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC 87

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+   D+  +L +    +  G ++++ +NA +VV     +   +++  V+  ++  S H 
Sbjct: 88  DVRHLDEMVRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHA 146

Query: 135 CQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            +   P L   G    I F +S AG +    L  Y  +K  +  L + LA E   + I V
Sbjct: 147 VEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGV 206

Query: 194 NAVSPWAVNTQI------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA------ 241
           + + P  V T++             +                S   ++++ L A      
Sbjct: 207 SVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266

Query: 242 -FLCLP 246
               LP
Sbjct: 267 RLYILP 272

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  141 bits (357), Expect = 5e-41
 Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 29/263 (11%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S++G+ A++TGG  G+G A  E L   GAS        +    + ++    G     +  
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPA 65

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAA------LVVMKRATEYTLEEYSSVMSTNV 128
           D++     +  +      F G++++ VN A          +K+   +TLE++  V+  N+
Sbjct: 66  DVTSEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124

Query: 129 ESSYHLCQL-AHPLLKASGNAS-----IVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
             ++++ +L A  + +   +       I+  +SVA        +AY+ASKG I  +T  +
Sbjct: 125 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 184

Query: 183 ACEWATDSIRVNAVSPWAVNTQIS---PPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISP 238
           A + A   IRV  ++P    T +    P  + +        L ++ P  +R  +P E + 
Sbjct: 185 ARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCN-------FLASQVPFPSRLGDPAEYAH 237

Query: 239 LVAFLCLPAASYITGQVISIDGG 261
           LV  +      ++ G+VI +DG 
Sbjct: 238 LVQAII--ENPFLNGEVIRLDGA 258

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  139 bits (353), Expect = 7e-40
 Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 29/268 (10%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV----------HTCGRDQNMINERIQEWES 64
            + G   +VTG   GIG A     A  GA V           +     +     + E  +
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 65  KGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVM 124
            G +      +++  DQ   LI+T    F G L++LVNNA +V  +     + EE+ +V+
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVI 142

Query: 125 STNVESSYHLCQLAHPLLKASGNA------SIVFMSSVAGAISIPRLSAYAASKGAINQL 178
           + +++  +   + A    +    A       I+  SS AG         Y+A+K  I  L
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202

Query: 179 TKNLACEWATDSIRVNAVSPWAVN--TQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEI 236
           T   A E     + VNA++P A    T+    +           +  +     +  P  +
Sbjct: 203 TLVGAAEMGRYGVTVNAIAPSARTRMTETVFAE----------MMATQDQDFDAMAPENV 252

Query: 237 SPLVAFLCLPAASYITGQVISIDGGYTA 264
           SPLV +L    A  +TG+V  ++GG   
Sbjct: 253 SPLVVWLGSAEARDVTGKVFEVEGGKIR 280

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  137 bits (347), Expect = 1e-39
 Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 27/260 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+    +VTG + G+G A+   LA+ GA+V           E   E    G  V     D
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNAD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNA----ALVVMKRATEYTLEEYSSVMSTNVESS 131
           ++        +      F G ++ LVN A       ++ R+  + L+ ++  ++ N+  +
Sbjct: 62  VTNEADATAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120

Query: 132 YHLCQLAHPLLKAS------GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
           +++ +LA  ++             IV  +S+A        +AYAASKG +  LT   A E
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARE 180

Query: 186 WATDSIRVNAVSPWAVNTQIS---PPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLVA 241
            A   IRV  ++P   +T +    P D+ D        L A  P   R     E + LV 
Sbjct: 181 LARFGIRVVTIAPGIFDTPMMAGMPQDVQD-------ALAASVPFPPRLGRAEEYAALVK 233

Query: 242 FLCLPAASYITGQVISIDGG 261
            +C    + + G+VI +DG 
Sbjct: 234 HIC--ENTMLNGEVIRLDGA 251

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  137 bits (348), Expect = 4e-39
 Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 9/199 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGS 72
              G TA VTGG  G+G  +V +L   G  V      Q+ I++ +   E++  G +V G 
Sbjct: 5   DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             D++  +  +   + V + F G ++IL NNA + + +   E + +++  ++  N+    
Sbjct: 65  QLDVASREGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV 123

Query: 133 HLCQLAHPLLKASGNAS------IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           +      P +     A       +V  +S+A  ++      Y  +K A+  L+++L    
Sbjct: 124 NGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL 183

Query: 187 ATDSIRVNAVSPWAVNTQI 205
               I V+ + P  V + I
Sbjct: 184 LKYEIGVSVLCPGLVKSYI 202

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  135 bits (342), Expect = 4e-39
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 5/184 (2%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
             L+TG +RGIG A    L   G  V    RD+    +R+Q   ++         D+   
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARDE----KRLQALAAELEGALPLPGDVREE 62

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
               + +  +   F G+L+ LVNNA + VMK   E TLEE+  V+ TN+  ++   + A 
Sbjct: 63  GDWARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAV 121

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P L   G  +IV + S+AG       +AY ASK  +  L      +    ++RV  V P 
Sbjct: 122 PALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPG 181

Query: 200 AVNT 203
           +V+T
Sbjct: 182 SVDT 185

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  136 bits (345), Expect = 9e-39
 Identities = 56/262 (21%), Positives = 108/262 (41%), Gaps = 34/262 (12%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV---------HTCGRDQNMINERIQEWESK 65
              G   LVTG   G+G A     A  GA V            G+  +  ++ ++E   +
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 66  GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMS 125
           G K   +   +  G   EKL++T    F G+++++VNNA ++  +  +  + E++  +  
Sbjct: 66  GGKAVANYDSVEAG---EKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQR 121

Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            ++  S+ + + A   +K      I+  +S +G       + Y+A+K  +  L   L  E
Sbjct: 122 VHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 181

Query: 186 WATDSIRVNAVSPWAV---NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
              ++I  N ++P A       + P DL + L                 +P  ++PLV +
Sbjct: 182 GRKNNIHCNTIAPNAGSRMTETVMPEDLVEAL-----------------KPEYVAPLVLW 224

Query: 243 LCLPAASYITGQVISIDGGYTA 264
           LC  +     G +  +  G+  
Sbjct: 225 LCHESC-EENGGLFEVGAGWIG 245

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  133 bits (336), Expect = 6e-38
 Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 33/268 (12%)

Query: 10  GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV 69
           G     +R   A+VTGG  G+G A  + L   GA V         +   +      G + 
Sbjct: 1   GPGSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRA 54

Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNA----ALVVMKRATEYTLEEYSSVMS 125
             +  D++        ++   ++  G L I+VN A    A+ V+ R   ++L  +  ++ 
Sbjct: 55  RFAAADVTDEAAVASALDLAETM--GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVD 112

Query: 126 TNVESSYHLCQLA-------HPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAINQ 177
            N+  S+++ +LA        P+   +     I+  +SVA        +AY+ASKG +  
Sbjct: 113 INLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVG 172

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQIS---PPDLNDLLVQEYVKLIAKTPL-ARSAEP 233
           +T  +A + A+  IRV  ++P   +T +    P +           L  + P  +R   P
Sbjct: 173 MTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARA-------SLGKQVPHPSRLGNP 225

Query: 234 NEISPLVAFLCLPAASYITGQVISIDGG 261
           +E   L   +       + G+VI +DG 
Sbjct: 226 DEYGALAVHII--ENPMLNGEVIRLDGA 251

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  139 bits (352), Expect = 6e-38
 Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 34/262 (12%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV---------HTCGRDQNMINERIQEWESK 65
             +    ++TG   G+G     E A+ GA V         +  G +    +  + E    
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN 64

Query: 66  GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMS 125
           G        ++  GD   K++ET    F G +++++NNA ++      + T ++Y  V+ 
Sbjct: 65  GGVAVADYNNVLDGD---KIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVID 120

Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            ++  ++ + + A P  +      IV  SS AG       + YA++K A+    + LA E
Sbjct: 121 VHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKE 180

Query: 186 WATDSIRVNAVSPWAV---NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
            A  +I+ NA++P A       I PP + + L                  P +++PLV +
Sbjct: 181 GAKYNIKANAIAPLARSRMTESIMPPPMLEKL-----------------GPEKVAPLVLY 223

Query: 243 LCLPAASYITGQVISIDGGYTA 264
           L       +TGQ   +  G+ A
Sbjct: 224 LSSAEN-ELTGQFFEVAAGFYA 244

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  126 bits (318), Expect = 3e-33
 Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 38/258 (14%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN------ERIQEWESKGFKV 69
           L+    L+TG   G+G    +  A++GA V        ++N      + + E ++ G + 
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKV--------VVNDFKDATKTVDEIKAAGGEA 371

Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVE 129
                D++     E +I+ V   + G ++ILVNNA ++  +   + + +E+ SV   ++ 
Sbjct: 372 WPDQHDVA--KDSEAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLI 428

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
            +++L +LA P         I+ ++S +G       + Y++SK  I  L+K +A E A +
Sbjct: 429 GTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKN 488

Query: 190 SIRVNAVSPWAV---NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
           +I+VN V+P A       I      +L                    ++++PL+ +L   
Sbjct: 489 NIKVNIVAPHAETAMTLSIMREQDKNLY-----------------HADQVAPLLVYLGTD 531

Query: 247 AASYITGQVISIDGGYTA 264
               +TG+   I GG+  
Sbjct: 532 DV-PVTGETFEIGGGWIG 548

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  126 bits (320), Expect = 3e-36
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 16/185 (8%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           M  L+TG T G+G A    L   G  +   GR        + E  ++         DL+ 
Sbjct: 1   MRVLITGATGGLGGAFARALK--GHDLLLSGRRA----GALAEL-AREVGARALPADLAD 53

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
             + + L+E       G L++LV+           E   +    +++ +           
Sbjct: 54  ELEAKALLEEA-----GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAH----LLTAAFV 104

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
               +    A  VF  +    + +P  +AYAA+KGA+    +    E   + + +  V  
Sbjct: 105 LKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRL 164

Query: 199 WAVNT 203
            AV T
Sbjct: 165 PAVAT 169

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  127 bits (322), Expect = 4e-36
 Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 37/256 (14%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           +ALVTGG  G+G A    L   G  V        ++ +  +E    G  +     D++  
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRV--------VVLDLRRE----GEDLIYVEGDVTRE 51

Query: 80  DQREKLIETVSSVFDGKLNILVNNA----ALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +   + +       +  L  +V+ A    A  ++ +   + LE +  V+  N+  ++++ 
Sbjct: 52  EDVRRAVARAQE--EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 136 QL-AHPLLKASGNAS-----IVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           +L A  + +   +A      IV  +SVA        +AYAASKG +  LT   A E A  
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 169

Query: 190 SIRVNAVSPWAVNTQIS---PPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLVAFLCL 245
            IRV  V+P   +T +    P             L A+ P   R   P E + LV  +  
Sbjct: 170 GIRVVTVAPGLFDTPLLQGLPEKAKA-------SLAAQVPFPPRLGRPEEYAALVLHIL- 221

Query: 246 PAASYITGQVISIDGG 261
                + G+V+ +DG 
Sbjct: 222 -ENPMLNGEVVRLDGA 236

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  132 bits (334), Expect = 2e-35
 Identities = 62/262 (23%), Positives = 102/262 (38%), Gaps = 34/262 (12%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASV---------HTCGRDQNMINERIQEWESK 65
              G  A+VTG   G+G       A  GA V            G  Q   +  + E    
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75

Query: 66  GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMS 125
           G +       +  G    K+IET    F G+++ILVNNA ++  +   + + ++++ V  
Sbjct: 76  GGEAVADYNSVIDG---AKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVND 131

Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            +++ S+   Q A P +K      I+  SS +G         Y A+K  +  L   +A E
Sbjct: 132 VHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIE 191

Query: 186 WATDSIRVNAVSPWAV---NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
            A +++  N + P A       I P  L + L                 +P  I+P+VA+
Sbjct: 192 GARNNVLCNVIVPTAASRMTEGILPDILFNEL-----------------KPKLIAPVVAY 234

Query: 243 LCLPAASYITGQVISIDGGYTA 264
           LC  +     G  I    G+  
Sbjct: 235 LCHESCE-DNGSYIESAAGWAT 255

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  123 bits (311), Expect = 1e-34
 Identities = 35/188 (18%), Positives = 77/188 (40%), Gaps = 10/188 (5%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSF 78
             ++TG + G+G  + +     G + +  GR +     ++    +     V     DL+ 
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSE----SKLSTVTNCLSNNVGYRARDLAS 58

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
             + E+L E +    D   + +V++A         E   E+  +++  N+ S+ ++ +  
Sbjct: 59  HQEVEQLFEQL----DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
               K     ++V + S A      + S Y A K A+  L +++  E     +++ AV P
Sbjct: 115 VKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYP 173

Query: 199 WAVNTQIS 206
             + T+  
Sbjct: 174 GGMATEFW 181

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  124 bits (312), Expect = 2e-34
 Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 20/203 (9%)

Query: 20  TALVTGGTRGIGYAIVEELARF---GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           + L+TG  RG+G  +V+ L         + T  R++    E +++       +     DL
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 81

Query: 77  SFGDQREKLIETVSSVF-DGKLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVESSYHL 134
              D  +KL+  +  V  D  LN+L NNA       R T    +E    + TN      L
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141

Query: 135 CQLAHPLLKAS-----------GNASIVFMSSVAGAISI---PRLSAYAASKGAINQLTK 180
            +   PLLK +           G A+I+ MSS+ G+I       + AY  SK A+N  TK
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 201

Query: 181 NLACEWATDSIRVNAVSPWAVNT 203
           +L+ +     I   ++ P  V T
Sbjct: 202 SLSVDLYPQRIMCVSLHPGWVKT 224

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  119 bits (300), Expect = 8e-33
 Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 25/206 (12%)

Query: 20  TALVTGGTRGIGYAIVEELARFGAS--VHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           + +VTG  RGIG  +V++L +      +    RD     E       K  +V      ++
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVT 61

Query: 78  FGDQREKLIETVSSVFDG-KLNILVNNAA-LVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
                +  +  V  +     L++L+NNA  L+     TE      +  +  N  S   L 
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 136 QLAHPLLKAS-----------GNASIVFMSSVAGAISIP-------RLSAYAASKGAINQ 177
           Q   PLLK +             A+++ +SS  G+I+          + AY  SK AIN 
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNT 203
             + LA +   D++ V    P  V T
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQT 207

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  118 bits (299), Expect = 1e-32
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 13/194 (6%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-----WESKGFKVTGS 72
              A++TG +RGIG AI   LAR G ++    R      +R+++      + +G +V   
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSV----DRLEKIAHELMQEQGVEVFYH 57

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
             D+S  +  E+  + V   F G ++++V NA L   KR  E + EE+  ++  N+   +
Sbjct: 58  HLDVSKAESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVW 116

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
              +     LK +G  ++V  S V+  + IP    Y ++K A   L +    E     +R
Sbjct: 117 RTLKAFLDSLKRTGGLALVTTSDVSARL-IPYGGGYVSTKWAARALVRTFQIE--NPDVR 173

Query: 193 VNAVSPWAVNTQIS 206
              + P AV+T   
Sbjct: 174 FFELRPGAVDTYFG 187

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  118 bits (297), Expect = 2e-32
 Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 7/187 (3%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLS 77
           M  LVTG T G G  I     + G  V   GR Q    ER+QE + + G  +  +  D+ 
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVR 56

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQ 136
                E+++ ++ + +   ++ILVNNA L + M+ A + ++E++ +++ TN +   ++ +
Sbjct: 57  NRAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 137 LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAV 196
              P +    +  I+ + S AG+      + Y A+K  + Q + NL  +    ++RV  +
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175

Query: 197 SPWAVNT 203
            P  V  
Sbjct: 176 EPGLVGG 182

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  117 bits (296), Expect = 4e-32
 Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 3/191 (1%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           +     L+TG + GIG  I  EL   GA +    R Q  I     E    G      V D
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD 61

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++         +     + G++++LVNNA ++ +       ++E+  ++  N++      
Sbjct: 62  VTDRHSVAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
               P+++A  +  I+ + S+     +P  + Y A+K A+  ++  L  E  + +IRV  
Sbjct: 121 GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTC 178

Query: 196 VSPWAVNTQIS 206
           V+P  V ++++
Sbjct: 179 VNPGVVESELA 189

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  118 bits (297), Expect = 5e-32
 Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 9/199 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF--KVTGSV 73
            R   ALVTG + GIG A+   L + G  V  C R    I E   E +S G+   +    
Sbjct: 30  WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 89

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CDLS  +    +   + S     ++I +NNA L         +   +  + + NV +   
Sbjct: 90  CDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSI 148

Query: 134 LCQLAHPLLKASGNAS--IVFMSSVAG--AISIPRLSAYAASKGAINQLTKNLACEWAT- 188
             + A+  +K        I+ ++S++G   + +     Y+A+K A+  LT+ L  E    
Sbjct: 149 CTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA 208

Query: 189 -DSIRVNAVSPWAVNTQIS 206
              IR   +SP  V TQ +
Sbjct: 209 QTHIRATCISPGVVETQFA 227

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  116 bits (294), Expect = 7e-32
 Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 2/189 (1%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +L+G  AL+TG + GIG A    LA  GA+V    R    +     E  + G KV     
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++     +  + +      G L+ILVNNA ++++    +    +++ ++ TN+    ++
Sbjct: 64  DVADRQGVDAAVASTVEAL-GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYM 122

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            + A P L      ++V MSS+AG +++   + Y A+K  +N  ++ L  E     +RV 
Sbjct: 123 TRAALPHLLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVV 181

Query: 195 AVSPWAVNT 203
            + P   +T
Sbjct: 182 VIEPGTTDT 190

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  117 bits (295), Expect = 8e-32
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 7/189 (3%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
                  ++TG + GIG AI    +  G  +    R      ER++           +  
Sbjct: 13  GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKAL--NLPNTLCAQV 66

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++     +  I     ++ G  + +VNNA ++++ +       E+  +   NV    + 
Sbjct: 67  DVTDKYTFDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNG 125

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q     +KA    +I+ +SS+AG  + P  +AY  +K A++ +++N+  E A  ++RV 
Sbjct: 126 MQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVM 185

Query: 195 AVSPWAVNT 203
            ++P AV T
Sbjct: 186 TIAPSAVKT 194

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  116 bits (292), Expect = 2e-31
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 4/194 (2%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S    T  +TG T G G A     A  G S+   GR +  +     E  +K  +V     
Sbjct: 18  SHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT-RVLPLTL 76

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYH 133
           D+         ++ +   F   L  L+NNA L +    A    L+++ +++ TN++   +
Sbjct: 77  DVRDRAAMSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLY 135

Query: 134 LCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
             +L  P L A G  ASIV + SVAG    P    Y  +K  + Q + NL C+     +R
Sbjct: 136 STRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVR 195

Query: 193 VNAVSPWAVNTQIS 206
           V  + P    ++ S
Sbjct: 196 VTNLEPGLCESEFS 209

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  113 bits (285), Expect = 3e-30
 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 15/202 (7%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFG---ASVHTCGRDQNMINERIQE------WESK 65
            L   T L+TG + GIG A   E          +    R      E+++E       E  
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRL----EKLEELKKTIDQEFP 85

Query: 66  GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVM 124
             KV  +  D++  ++ +  IE +   F   ++ILVNNA   +   R  +   E+   V 
Sbjct: 86  NAKVHVAQLDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVF 144

Query: 125 STNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLAC 184
            TNV +  ++ Q   P+ +A  +  IV + S+AG  + P  S Y ASK A+   T +L  
Sbjct: 145 DTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRK 204

Query: 185 EWATDSIRVNAVSPWAVNTQIS 206
           E     IRV  ++P  V T+ S
Sbjct: 205 ELINTKIRVILIAPGLVETEFS 226

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  112 bits (283), Expect = 5e-30
 Identities = 52/238 (21%), Positives = 84/238 (35%), Gaps = 49/238 (20%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELA-RFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           S     ALVTGG +GIG AIV +L   F   V    RD       +Q+ +++G       
Sbjct: 1   SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+        L + +   + G L++LVNNA +            +    M TN   +  
Sbjct: 61  LDIDDLQSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD 119

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLS--------------------------- 166
           +C    PL+K  G   +V +SS+    ++   S                           
Sbjct: 120 VCTELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 177

Query: 167 --------------AYAASKGAINQLTKNLACEWATDS----IRVNAVSPWAVNTQIS 206
                         AY  +K  +  L++  A + +       I +NA  P  V T ++
Sbjct: 178 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 235

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  103 bits (257), Expect = 4e-26
 Identities = 54/267 (20%), Positives = 91/267 (34%), Gaps = 78/267 (29%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSV 73
             +   A+VTGG +GIG+ I ++L+  G  V    RD    +E +++ ++     V    
Sbjct: 9   VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

Query: 74  CDL-SFGDQREKLIETVSSVFDGKLNILVNNAAL-------------------------- 106
            D+         L + + + F GKL+ILVNNA +                          
Sbjct: 69  LDVTDPIATMSSLADFIKTHF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVK 127

Query: 107 ----VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI 162
                  +     T E     +  N      + ++  PLL+ S +  IV +SS  G++  
Sbjct: 128 IYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKY 187

Query: 163 -------------------------------------------PRLSAYAASKGAINQLT 179
                                                         +AY  SK  +N  T
Sbjct: 188 VSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247

Query: 180 KNLACEWATDSIRVNAVSPWAVNTQIS 206
           + LA +      +VN V P  V T+++
Sbjct: 248 RVLANKI--PKFQVNCVCPGLVKTEMN 272

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  100 bits (251), Expect = 2e-25
 Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 4/186 (2%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
             LVTG + G G AI E     G +V    R    +++ +  +  +   ++    D++ G
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAIS---LDVTDG 63

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           ++ + +   V + + G++++LVNNA    +    E T  E   +   +V     L +   
Sbjct: 64  ERIDVVAADVLARY-GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
           P ++  G+ S+V +SS  G +S    SAY+A+K A+ QL++ LA E A   I+V  V P 
Sbjct: 123 PQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPG 182

Query: 200 AVNTQI 205
           A  T +
Sbjct: 183 AFRTNL 188

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 99.4 bits (248), Expect = 1e-24
 Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 7/193 (3%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-----WESKGFKVTGSVC 74
             L+TG + G G    E LA  G  V+   RD    N    E            +     
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+      ++ I+ +     G++++L++NA  +V   A  +T E+++ +   NV S+  +
Sbjct: 67  DVQSQVSVDRAIDQIIGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRV 125

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A P ++   +  ++++SS + A  + P L+ Y A+K A++ +    A E +   I  
Sbjct: 126 NRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIET 185

Query: 194 NAVSPWAVNTQIS 206
           + + P A  +  +
Sbjct: 186 SIIVPGAFTSGTN 198

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 98.2 bits (245), Expect = 3e-24
 Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 9/192 (4%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVH----TCGR--DQNMINERIQEWESKGFKVTGSV 73
             L+TG + GIG  +   LA   +       T      Q  + E  +        +    
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+          E V+   +G++++LV NA L ++        +  +SV+  NV  +  
Sbjct: 64  LDVRDSKSVAAARERVT---EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           + Q   P +K  G+  ++   SV G + +P    Y ASK A+  L ++LA       + +
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHL 180

Query: 194 NAVSPWAVNTQI 205
           + +    V+T  
Sbjct: 181 SLIECGPVHTAF 192

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 74.9 bits (185), Expect = 3e-16
 Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 28/261 (10%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEW-----ESKGF 67
           L G  ALV G    R +G+AI  +L   GA V  +         ER++       E+ G 
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSY------QAERLRPEAEKLAEALGG 59

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSV 123
            +     D++  ++ + L   V   F G L+ LV+  A      +  R  +   +++   
Sbjct: 60  ALLFR-ADVTQDEELDALFAGVKEAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
           +  +  S   + + A PLL+      IV ++  A    +P+ +  A +K A+    + LA
Sbjct: 118 LEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLA 175

Query: 184 CEWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA 241
            E     +RVNA+S   V T  +   P    +   + V      PL R+    E+  L  
Sbjct: 176 YELGPKGVRVNAISAGPVRTVAARSIPGFTKMY--DRVA--QTAPLRRNITQEEVGNLGL 231

Query: 242 FLCLPAASYITGQVISIDGGY 262
           FL  P AS ITG+V+ +D GY
Sbjct: 232 FLLSPLASGITGEVVYVDAGY 252

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 75.0 bits (185), Expect = 4e-16
 Identities = 52/262 (19%), Positives = 104/262 (39%), Gaps = 28/262 (10%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEW-----ESKGF 67
           L   T ++ G    R I + + + L + GA +  T         ER ++      E    
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTY------RKERSRKELEKLLEQLNQ 83

Query: 68  KVTGSV-CDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSS 122
                   D+   ++     E +     G ++ + ++ A      +  R +E + E +  
Sbjct: 84  PEAHLYQIDVQSDEEVINGFEQIGKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLL 142

Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
               +  S   +   A  L+      SIV  + + G  ++   +    +K ++    K L
Sbjct: 143 AQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYL 200

Query: 183 ACEWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           A +   D+IRVNA+S   + T  +      N +L  + ++   + PL R+ +  E+    
Sbjct: 201 ALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTIL--KEIE--ERAPLKRNVDQVEVGKTA 256

Query: 241 AFLCLPAASYITGQVISIDGGY 262
           A+L    +S +TG+ I +D G+
Sbjct: 257 AYLLSDLSSGVTGENIHVDSGF 278

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 75.0 bits (185), Expect = 4e-16
 Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 27/261 (10%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEW-----ESKGF 67
           L G  AL+TG    R I Y I +   R GA +  T          ++++      +  G 
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTY------ATPKLEKRVREIAKGFGS 72

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSV 123
            +    CD+S  +  + L + +   + G L+I+V++ A            + + E +   
Sbjct: 73  DLVVK-CDVSLDEDIKNLKKFLEENW-GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIA 130

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
           M  +V S   L +   PL++     +IV +S       +P  +    +K A+    + LA
Sbjct: 131 MDISVYSLIALTRELLPLMEGRN-GAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLA 189

Query: 184 CEWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA 241
            + A    R+NA+S   V T  +      + L+  E+       P  +     ++     
Sbjct: 190 YDIAKHGHRINAISAGPVKTLAAYSITGFHLLM--EHTT--KVNPFGKPITIEDVGDTAV 245

Query: 242 FLCLPAASYITGQVISIDGGY 262
           FLC   A  ITG+V+ +D GY
Sbjct: 246 FLCSDWARAITGEVVHVDNGY 266

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 28/261 (10%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEW-----ESKGF 67
           + G   ++ G    + + + I + +   GA V  T       ++E  ++      ES G 
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTY------LSETFKKRVDPLAESLGV 81

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSV 123
           K+T   CD+S  +  + + + ++  + G L+ +V+  A      +  R  + +L  + + 
Sbjct: 82  KLTVP-CDVSDAESVDNMFKVLAEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTS 139

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
           M  +  S  ++   A PL+      SI+ +S       +P  +     K A+    K LA
Sbjct: 140 MHISCYSFTYIASKAEPLMT--NGGSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLA 197

Query: 184 CEWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA 241
            +     IRVNA+S   V T  S    D + +L   + K    +PL R+   +++     
Sbjct: 198 VDLGKQQIRVNAISAGPVRTLASSGISDFHYIL--TWNK--YNSPLRRNTTLDDVGGAAL 253

Query: 242 FLCLPAASYITGQVISIDGGY 262
           +L        TG+ + +D GY
Sbjct: 254 YLLSDLGRGTTGETVHVDCGY 274

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 74.0 bits (182), Expect = 1e-15
 Identities = 64/292 (21%), Positives = 105/292 (35%), Gaps = 49/292 (16%)

Query: 15  SLRGMTALVTG--GTRGIGYAIVEELARFGASV-------HTCGRDQNMINERIQEWESK 65
            LRG TA V G   + G G+AI + LA  GA V             +++ + R+ E    
Sbjct: 6   DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKL 65

Query: 66  GFKVTGSV-----------------CDLSFGDQREKLIE-TVSSVFD------GKLNILV 101
                                     D+    +   +   T+  V        G ++ILV
Sbjct: 66  PDGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILV 125

Query: 102 NNAALV--VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA 159
           ++ A    V K   E + + Y +  S +  S   L Q   P++   G  S V +S +A  
Sbjct: 126 HSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGG--SAVTLSYLAAE 183

Query: 160 ISIPRLSAYA----ASKGAINQLTKNLACEWATDS-IRVNAVSPWAVNT----QISPPDL 210
             +P    Y     ++K A+   T+ LA E      +RVNA+S   + +     I     
Sbjct: 184 RVVPG---YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGE 240

Query: 211 NDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY 262
              +           PL R    +++     FL  P A  ++G  + +D G 
Sbjct: 241 KSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 52/262 (19%), Positives = 109/262 (41%), Gaps = 28/262 (10%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEW-----ESKGF 67
           L G   +V G    R I + I   L   GA +  T         ER+++       +   
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTY------AGERLEKSVHELAGTLDR 58

Query: 68  KVTGSV-CDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSS 122
             +  + CD++   + E    ++     G ++ + +  A      ++        + +  
Sbjct: 59  NDSIILPCDVTNDAEIETCFASIKEQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLL 117

Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
             + +  S   + + A P++      SIV ++ + G + +P  +    +K +++   K L
Sbjct: 118 AHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYL 175

Query: 183 ACEWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           A +   ++IRVN++S   + T  +    D N +L  + ++   + PL R+  P E+    
Sbjct: 176 AADLGKENIRVNSISAGPIRTLSAKGISDFNSIL--KDIE--ERAPLRRTTTPEEVGDTA 231

Query: 241 AFLCLPAASYITGQVISIDGGY 262
           AFL    +  ITG+ + +D G+
Sbjct: 232 AFLFSDMSRGITGENLHVDSGF 253

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 56/261 (21%), Positives = 107/261 (40%), Gaps = 28/261 (10%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEW-----ESKGF 67
           L+G   L+ G    R I + I +     GA +  T         + +++      E  G 
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTY------QGDALKKRVEPLAEELGA 82

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSV 123
            V G  CD++     + + ET+   + GKL+ LV+         +  R  + +   +++ 
Sbjct: 83  FVAGH-CDVADAASIDAVFETLEKKW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNT 140

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLA 183
           M  +V S   + + A  L+      SI+ ++       +P  +    +K A+    K LA
Sbjct: 141 MLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLA 198

Query: 184 CEWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA 241
            +    +IRVNA+S   + T  +    D   +L  ++ +     PL R+   +E+  +  
Sbjct: 199 VDLGPQNIRVNAISAGPIKTLAASGIGDFRYIL--KWNE--YNAPLRRTVTIDEVGDVGL 254

Query: 242 FLCLPAASYITGQVISIDGGY 262
           +     +  +TG+V   D GY
Sbjct: 255 YFLSDLSRSVTGEVHHADSGY 275

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 25/260 (9%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEW-ESKGFKVTG 71
           L G   L+TG    + I Y I + + R GA +  T         +R+++           
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTY---VGQFKDRVEKLCAEFNPAAVL 80

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILV------NNAALVVMKRATEYT-LEEYSSVM 124
             CD+    + + L   +  V+   L+ +V          L       +    E +S   
Sbjct: 81  P-CDVISDQEIKDLFVELGKVW-DGLDAIVHSIAFAPRDQL--EGNFIDCVTREGFSIAH 136

Query: 125 STNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLAC 184
             +  S   L +    ++K    AS+V ++ +    ++P  +    +K ++    +  A 
Sbjct: 137 DISAYSFAALAKEGRSMMKNRN-ASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTAL 195

Query: 185 EWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
               D I+VNAVS   + T  +    +   +L  +Y      +PL ++ +  E+   VAF
Sbjct: 196 ALGEDGIKVNAVSAGPIKTLAASGISNFKKML--DYNA--MVSPLKKNVDIMEVGNTVAF 251

Query: 243 LCLPAASYITGQVISIDGGY 262
           LC   A+ ITG+V+ +D GY
Sbjct: 252 LCSDMATGITGEVVHVDAGY 271

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 73.0 bits (180), Expect = 2e-15
 Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 26/260 (10%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGS 72
           L+G   L+ G    + I Y I +     GA++  T       +NE +++      +   S
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTY------LNESLEKRVRPIAQELNS 57

Query: 73  V----CDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYTLEEYSSVM 124
                 D+S  +  + L  +V     G L+ +V++ A      +     E +   +++ M
Sbjct: 58  PYVYELDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAM 116

Query: 125 STNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLAC 184
             +V S   L     PLL     AS++ +S +     +   +    +K A+    + LA 
Sbjct: 117 EISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAV 174

Query: 185 EWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF 242
           +     IRVNA+S   + T  S    D   +L  ++ +     PL ++    E+     +
Sbjct: 175 DLGKHHIRVNALSAGPIRTLASSGIADFRMIL--KWNE--INAPLRKNVSLEEVGNAGMY 230

Query: 243 LCLPAASYITGQVISIDGGY 262
           L    +S ++G+V  +D GY
Sbjct: 231 LLSSLSSGVSGEVHFVDAGY 250

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 72.2 bits (178), Expect = 4e-15
 Identities = 51/262 (19%), Positives = 106/262 (40%), Gaps = 29/262 (11%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEW-----ESKGF 67
           L G   LVTG      I Y I + + R GA +  T        N++++          G 
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY------QNDKLKGRVEEFAAQLGS 60

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATE-YTLEEYSS 122
            +    CD++     + +   +  V+  K +  V++        +        T E +  
Sbjct: 61  DIVLQ-CDVAEDASIDTMFAELGKVW-PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKI 118

Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
               +  S   + +    +L     ++++ +S +    +IP  +    +K ++    + +
Sbjct: 119 AHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYM 176

Query: 183 ACEWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           A     + +RVNA+S   + T  +    D   +L   + +  A TP+ R+    ++    
Sbjct: 177 ANAMGPEGVRVNAISAGPIRTLAASGIKDFRKML--AHCE--AVTPIRRTVTIEDVGNSA 232

Query: 241 AFLCLPAASYITGQVISIDGGY 262
           AFLC   ++ I+G+V+ +DGG+
Sbjct: 233 AFLCSDLSAGISGEVVHVDGGF 254

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 72.3 bits (178), Expect = 5e-15
 Identities = 58/235 (24%), Positives = 85/235 (36%), Gaps = 42/235 (17%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S    T ++TG   G+G     ELAR GA+V    RD        +       +V     
Sbjct: 13  SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG---QVEVREL 69

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL   D     +   +       ++L+NNA   +M      T++ + S + TN     H 
Sbjct: 70  DLQ--DLSS--VRRFADGVS-GADVLINNAG--IMAVPYALTVDGFESQIGTN-----H- 116

Query: 135 CQLAH----PLLKASGNASIVFMSSVA---GAI----------SIPRLSAYAASKGAINQ 177
             L H     LL       +V +SS+A   G I                AY+ SK A N 
Sbjct: 117 --LGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLA-NL 173

Query: 178 L-TKNLA--CEWATDSIRVNAVSPWAVNTQI---SPPDLNDLLVQEYVKLIAKTP 226
           L T  L      A   +R  A  P   +T +   S   L D L+    +++A   
Sbjct: 174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDA 228

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 71.5 bits (176), Expect = 7e-15
 Identities = 57/262 (21%), Positives = 110/262 (41%), Gaps = 29/262 (11%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEW-----ESKGF 67
           L G   L+TG    R I Y I +   R GA +  T       + +R ++         G 
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTY------VGDRFKDRITEFAAEFGS 65

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALV----VMKRATEYT-LEEYSS 122
           ++    CD++   Q + L  ++ + +   L+ LV++        +     +    E +  
Sbjct: 66  ELVFP-CDVADDAQIDALFASLKTHW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRI 123

Query: 123 VMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNL 182
               +  S   L + A P+L    +AS++ +S +    +IP  +    +K A+    + L
Sbjct: 124 AHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYL 181

Query: 183 ACEWATDSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           A       +RVNA+S   + T  +        +L  ++V+  + +PL R+    ++    
Sbjct: 182 AVSLGAKGVRVNAISAGPIKTLAASGIKSFGKIL--DFVE--SNSPLKRNVTIEQVGNAG 237

Query: 241 AFLCLPAASYITGQVISIDGGY 262
           AFL    AS +T +V+ +D G+
Sbjct: 238 AFLLSDLASGVTAEVMHVDSGF 259

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 71.7 bits (176), Expect = 9e-15
 Identities = 61/290 (21%), Positives = 111/290 (38%), Gaps = 51/290 (17%)

Query: 15  SLRGMTALVTG--GTRGIGYAIVEELARFGASV------------------------HTC 48
            LRG  A + G     G G+A+ + LA  GA +                           
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 49  GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKL-IETVSSVFD------GKLNILV 101
                M  +++   ++          D+    +       TV    +      G ++ILV
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 102 NNAALV--VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA 159
           ++ A    V K   E + + Y + +S +  S   L     P++   G  + + ++ +A  
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGG--ASISLTYIASE 182

Query: 160 ISIPRLSAY----AASKGAINQLTKNLACEW-ATDSIRVNAVSPWAVNTQISP--PDLND 212
             IP    Y    +++K A+   T+ LA E     +IRVN +S   + ++ +     ++ 
Sbjct: 183 RIIPG---YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT 239

Query: 213 LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY 262
           ++  EY       P+ ++   +E+    AFL  P AS ITG  I +D G 
Sbjct: 240 MI--EYSY--NNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 69.9 bits (171), Expect = 5e-14
 Identities = 66/305 (21%), Positives = 113/305 (37%), Gaps = 62/305 (20%)

Query: 15  SLRGMTALVTG--GTRGIGYAIVEELARFGASV-----------HTCGRDQNMINERIQE 61
            LRG TA V G   + G G+AI + L   GA V              G + +   +    
Sbjct: 6   DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFY 65

Query: 62  WESKGFKVTGSV--------------------------CDLSFGDQREKLIE-TVSSVFD 94
            +    KV                               ++S   +   +   T+S V +
Sbjct: 66  AQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAE 125

Query: 95  ------GKLNILVNNAALV--VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG 146
                 G+++ILV++ A    V K   + + + Y + +S++  S   L Q   PL+K  G
Sbjct: 126 AVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGG 185

Query: 147 NASIVFMSSVAGAISIPRLSAY----AASKGAINQLTKNLACEW-ATDSIRVNAVSPWAV 201
             S + +S +A    IP    Y    +++K A+    + LA E     ++RVN +S   +
Sbjct: 186 --SALALSYIASEKVIPG---YGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL 240

Query: 202 NT----QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
            +     I        +        A  PL +  E +++     FL  P A  +TG  + 
Sbjct: 241 KSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLY 300

Query: 258 IDGGY 262
           +D G 
Sbjct: 301 VDNGL 305

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 64.5 bits (157), Expect = 2e-12
 Identities = 30/165 (18%), Positives = 56/165 (33%), Gaps = 15/165 (9%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S++G  A+V  GT  +G      LA  GA V  CGR  +           + FKV  +  
Sbjct: 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAA 174

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           + +    R + ++          + +    A+ +           + +  S  + + Y+ 
Sbjct: 175 ETADDASRAEAVKGA--------HFVFTAGAIGLE----LLPQAAWQNESSIEIVADYNA 222

Query: 135 -CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL 178
              L    + A+            GA+ I  L      +  I +L
Sbjct: 223 QPPLGIGGIDATDKGKEYGGKRAFGALGIGGL-KLKLHRACIAKL 266

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 47/278 (16%), Positives = 87/278 (31%), Gaps = 49/278 (17%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L G   LV+G      I + I       GA +   G D+  + +RI +       +    
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLL--E 62

Query: 74  CDLSFGDQREKLIETVSSVF--DGKLNILV------NNAALVVMKRATEYTLEEYSSVMS 125
            D+   +    L   V+       KL+ +V          + +     +    + S  + 
Sbjct: 63  LDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGI-NPFFDAPYADVSKGIH 121

Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS------------KG 173
            +  S   + +   P++      SIV M              +  S            K 
Sbjct: 122 ISAYSYASMAKALLPIMNP--GGSIVGMD-------------FDPSRAMPAYNWMTVAKS 166

Query: 174 AINQLTKNLACEWATDSIRVNAVSPWAVNT----QISPPDLNDLLVQEYVKLI----AKT 225
           A+  + + +A E     +R N V+   + T     I    L +    +   L      + 
Sbjct: 167 ALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA 226

Query: 226 PLARSA-EPNEISPLVAFLCLPAASYITGQVISIDGGY 262
           P+  +  +   ++  V  L        TG +I  DGG 
Sbjct: 227 PIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 37/185 (20%), Positives = 59/185 (31%), Gaps = 19/185 (10%)

Query: 2   AEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGA---------------SVH 46
           A           W   G T LVTG            LAR GA                  
Sbjct: 236 ASLPAHGTASPWWQADG-TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGT 294

Query: 47  TCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAAL 106
           +   + + +   + E    G   T   CDL+  +   +L+  VS      L+ +++    
Sbjct: 295 SGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAGVSD--AHPLSAVLHLPPT 352

Query: 107 VVMKRATEYTLEEYSSVMSTNVESSYHLCQL-AHPLLKASGNASIVFMSSVAGAISIPRL 165
           V  +       +  + V++    ++ HL +L             +V  SSVA        
Sbjct: 353 VDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQ 412

Query: 166 SAYAA 170
            AYAA
Sbjct: 413 GAYAA 417

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 55.7 bits (134), Expect = 3e-09
 Identities = 57/326 (17%), Positives = 107/326 (32%), Gaps = 86/326 (26%)

Query: 18  GMTALVTG--GTRGIGYAIVEELARFGASV------------HTCGRDQNMINERIQEWE 63
                + G   T G G+ I +EL++    +                ++    N+ I + +
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 64  SKGFKVTGSVCDLSFGDQREKLI-------------ETVSSVFD------GKLNILVNNA 104
            K   +     D SF    +                 T+  V +      GK+N+LV++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 105 ALV--VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI 162
           A    V K     + + Y   +S +  S   LC+    ++K    +SI+ ++  A    +
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK--PQSSIISLTYHASQKVV 179

Query: 163 PRLSAYA----ASKGAINQLTKNLACEWATDS-IRVNAVSPWAVNT-------------- 203
           P    Y     ++K A+   T+ LA     +  IR+N +S   + +              
Sbjct: 180 PG---YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYE 236

Query: 204 --------------------------QISPPDLNDLLVQEYVKLIAK-TPLARSAEPNEI 236
                                     +      N   +   ++   K  PL +     +I
Sbjct: 237 NNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDI 296

Query: 237 SPLVAFLCLPAASYITGQVISIDGGY 262
             + +FL    +  ITGQ I +D G 
Sbjct: 297 GSVASFLLSRESRAITGQTIYVDNGL 322

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 54.9 bits (132), Expect = 1e-08
 Identities = 31/175 (17%), Positives = 56/175 (32%), Gaps = 9/175 (5%)

Query: 1    MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTC----GRDQNMIN 56
            +   A              + ++TGG  G G  + + L   GA         G       
Sbjct: 1868 LPPIALTGLSKTFCPPHK-SYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQA 1926

Query: 57   ERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYT 116
             +++EW  +G +V  S  + S  D    LI   +    G +  + N A ++        T
Sbjct: 1927 RQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ--LGPVGGVFNLAMVLRDAVLENQT 1984

Query: 117  LEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS 171
             E +  V       + +L ++             V  SSV+        + Y  +
Sbjct: 1985 PEFFQDVSKPKYSGTANLDRVTREA--CPELDYFVIFSSVSCGRGNAGQANYGFA 2037

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGAS----VHTCGRDQNMINERIQEWESKGFKV 69
             + G + LVTGGT GIG  +   LA  GA+        G D     E   E E  G +V
Sbjct: 236 PPVHG-SVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRV 294

Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRA-TEYTLEEYSSVMSTNV 128
           T + CD +  +    L+  +    D  L  + ++A +        + TL +  ++M   +
Sbjct: 295 TIAACDAADREALAALLAELPE--DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKL 352

Query: 129 ESSYHLCQLA--HPLLKASGNASIVFMSSVAGAISIPRLSAYAA 170
            ++ HL +L     L       + V  SS A          YAA
Sbjct: 353 TAARHLHELTADLDL------DAFVLFSSGAAVWGSGGQPGYAA 390

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 14/157 (8%)

Query: 20  TALVTGGTRGIGYAIVEELARFGAS----VHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           T LVTGGT G+G  I   LAR GA     V   G D +   E + E E+ G + T + CD
Sbjct: 228 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD 287

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  +   +L+  +    D  L+ + + AA +        T E         V  + +L 
Sbjct: 288 VTDRESVRELLGGIGD--DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 345

Query: 136 QLA--HPLLKASGNASIVFMSSVAGAISIPRLSAYAA 170
           +L     L       + V  SS A A   P L  YA 
Sbjct: 346 ELTRELDL------TAFVLFSSFASAFGAPGLGGYAP 376

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 27/163 (16%)

Query: 20  TALVTGGTRGIGYAIVEELA-RFGA-SVHTCGR---DQNMINERIQEWESKGFKVTGSVC 74
           T LVTGGT  +G  +   L    G  ++    R     +   E + +  + G +V+   C
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQAC 591

Query: 75  DLSFGDQREKLIETVSS------VFDGKLNILVNNAALVVMKRATEY-TLEEYSSVMSTN 127
           D++  +   K++ ++        V          +AA V+    +E  T+E    V+   
Sbjct: 592 DVADRETLAKVLASIPDEHPLTAVV---------HAAGVLDDGVSESLTVERLDQVLRPK 642

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA 170
           V+ + +L +L  P        ++V  SSV+G +       YAA
Sbjct: 643 VDGARNLLELIDPD------VALVLFSSVSGVLGSGGQGNYAA 679

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 47.8 bits (113), Expect = 2e-06
 Identities = 47/315 (14%), Positives = 89/315 (28%), Gaps = 70/315 (22%)

Query: 2   AEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG--RDQNMINERI 59
             A        K        LV G + G G A     A FG    T G   ++     + 
Sbjct: 51  TRARGVRNDGPKK------VLVIGASSGYGLASRITAA-FGFGADTLGVFFEKPGTASKA 103

Query: 60  ------------QEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA-- 105
                       +  ++ G        D      R ++IE + +   G+++++V + A  
Sbjct: 104 GTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASP 163

Query: 106 -----------------------------------LVVMKRATEYTLEEYSSVMSTNVES 130
                                                 ++ A+   +E+  +VM      
Sbjct: 164 VRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWE 223

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIP--RLSAYAASKGAINQLTKNLACEWAT 188
            +        +L  +  A  V  S +   I+ P     A   +K  +++  + L    A 
Sbjct: 224 LWIDALEGAGVL--ADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAK 281

Query: 189 DSIRVNAVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
                N     +V TQ S   P     ++  Y+ ++ K  +            +  L   
Sbjct: 282 HGGGANVAVLKSVVTQASAAIP-----VMPLYISMVYK-IMKEKGLHEGTIEQLDRLFRE 335

Query: 247 AASYITGQVISIDGG 261
                 GQ   +D  
Sbjct: 336 RLYRQDGQPAEVDEQ 350

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 20/164 (12%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGAS----VHTCGRDQNMINERIQEWESKGFKV 69
           W   G   L+TGG   IG  +   LA  GA         G +     E  +E    G +V
Sbjct: 256 WQPSGT-VLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEV 314

Query: 70  TGSVCDLSFGDQREKLIETVSSVFDGK-LNILVNNAALVVMKRATEYTLEEYSSVMSTNV 128
             + CD++  ++     + ++++      N + + A ++        + E + +V    V
Sbjct: 315 VHAACDVA--ER-----DALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKV 367

Query: 129 ESSYHLCQLA--HPLLKASGNASIVFMSSVAGAISIPRLSAYAA 170
             +  L QL      L A      V  SSV G        AYAA
Sbjct: 368 CGAELLHQLTADIKGLDA-----FVLFSSVTGTWGNAGQGAYAA 406

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 37/177 (20%)

Query: 15  SLRGMTALVTGGTRG-IGYAIVEELARFGASV--------HTCGRDQNMINERIQEWESK 65
            L   T L+TGG  G +G  +                    +     N     +  +++ 
Sbjct: 7   ELENQTILITGGA-GFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL 65

Query: 66  GFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMS 125
                G   ++   D        +  +     + L + AA+      ++ T+     VM 
Sbjct: 66  ----IGFKGEVIAADINNP--LDLRRLEKLHFDYLFHQAAV------SDTTMLNQELVMK 113

Query: 126 TNVESSYHLCQLAHPLLKASGNASIVFMSSVA--GAISIPR--------LSAYAASK 172
           TN ++  +L ++A      S  A +++ SS    G    P          + Y  SK
Sbjct: 114 TNYQAFLNLLEIA-----RSKKAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSK 165

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 31/180 (17%), Positives = 53/180 (29%), Gaps = 44/180 (24%)

Query: 2   AEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHT--C---GRDQNMIN 56
           A+           S    T L+TG T  +G  +V EL R         C           
Sbjct: 57  ADTLATAVNLPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR 116

Query: 57  ERIQEWESKGF-------------KVTGSVCDLS---FG---DQREKLIETVSSVFDGKL 97
            R+++    G              ++     D S    G       +L ETV  +     
Sbjct: 117 RRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIV---- 172

Query: 98  NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA 157
               ++AA+V            Y  +   NV  +  L ++A      +      ++S+  
Sbjct: 173 ----DSAAMV--------NAFPYHELFGPNVAGTAELIRIA----LTTKLKPFTYVSTAD 216

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 15/143 (10%), Positives = 40/143 (27%), Gaps = 28/143 (19%)

Query: 17  RGMTALVTGGTRG-IGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK-VTGSVC 74
             +   V G T G +G+     +   G  +    R     + +IQ       +     + 
Sbjct: 12  AHVKYAVLGAT-GLLGHHAARAIRAAGHDLVLIHRP----SSQIQRLAYLEPECRVAEML 66

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D             +     G L+ ++ +A     +         +   +++ +  +   
Sbjct: 67  D----------HAGLERALRG-LDGVIFSAGYYPSRPR------RWQEEVASALGQTNPF 109

Query: 135 CQLAHPLLKASGNASIVFMSSVA 157
                     +    I+++ S  
Sbjct: 110 YAAC----LQARVPRILYVGSAY 128

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 35/194 (18%), Positives = 58/194 (29%), Gaps = 49/194 (25%)

Query: 1   MAEAAEPVFGDKKWSLRG---MTALVTGGTRGIGYAIVEELARFGASVH-----TCGRDQ 52
           M  +            RG       +TG    IG  I E L   G  V        GR +
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE 60

Query: 53  NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG-KLNILVNNAALVVMKR 111
           +     +++  +  F V GS+ D             V+ +    + + +V+ AA      
Sbjct: 61  H-----LKDHPNLTF-VEGSIADH----------ALVNQLIGDLQPDAVVHTAASYKDPD 104

Query: 112 ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA-------------G 158
                   + +   TN     ++ Q A    K +     V+  +                
Sbjct: 105 D-------WYNDTLTNCVGGSNVVQAA----KKNNVGRFVYFQTALCYGVKPIQQPVRLD 153

Query: 159 AISIPRLSAYAASK 172
               P  S+YA SK
Sbjct: 154 HPRNPANSSYAISK 167

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	266
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.96
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.94
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.93
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.93
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.93
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.93
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.93
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.92
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.92
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.92
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.92
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.92
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.91
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.91
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.91
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.91
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.91
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.91
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.9
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.9
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.9
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.9
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.9
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.9
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.9
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.9
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.89
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.89
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.88
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.88
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.88
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.88
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.88
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.88
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.88
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.87
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.87
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.87
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.87
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.87
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.87
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.86
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.86
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.86
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.86
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.85
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.84
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.84
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.84
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.83
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.83
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.83
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.83
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.82
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.81
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.81
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.81
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.8
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.8
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.8
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.78
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.76
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.75
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.74
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.73
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.73
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.71
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.7
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.69
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.66
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.63
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.63
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.62
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.48
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.37
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.26
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.09
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.97
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.95
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.91
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.9
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.8
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.74
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.72
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.69
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.65
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.63
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.62
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.62
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.59
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.49
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.47
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.44
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.41
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.4
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.4
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.36
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.34
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.33
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.33
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.33
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.31
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.31
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.29
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.27
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.25
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.24
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.22
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.14
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.12
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.06
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.04
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.03
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.02
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.01
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.0
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.99
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.98
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.98
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.98
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.96
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.95
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.92
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.89
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.89
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.87
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.83
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.8
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.79
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.79
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.78
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.78
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.76
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.76
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.72
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.68
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.68
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.67
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.66
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.66
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.65
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.63
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.57
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.56
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.52
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.51
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.51
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.49
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.45
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.43
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.42
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.39
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.37
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.36
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.36
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.33
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.31
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.29
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.29
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.29
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.27
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.26
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.25
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.21
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.19
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.19
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.18
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.17
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.14
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.13
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.12
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.1
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.06
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.05
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.03
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.98
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.97
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.96
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.94
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.93
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.91
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.9
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.89
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.88
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.85
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.85
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.83
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.82
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.8
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.77
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.77
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.77
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.75
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.74
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.73
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.72
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.72
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.71
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.7
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.68
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.68
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.64
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.6
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.58
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.53
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.5
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.47
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.46
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.42
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.41
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.41
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.39
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.36
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.35
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.33
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.33
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	96.33
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.27
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.26
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.25
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.22
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.22
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.2
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.2
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.19
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.16
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.15
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.14
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	96.12
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.09
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.09
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.05
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.04
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.04
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.02
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.02
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.02
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.01
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.01
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.01
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.99
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.97
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.95
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.93
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.93
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.92
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.84
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.84
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.83
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.8
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	95.8
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.8
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.75
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.75
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.75
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.72
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.72
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.7

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=4.6e-65  Score=425.05  Aligned_cols=251  Identities=25%  Similarity=0.357  Sum_probs=233.9

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+++.++++++++++.+.++.++++|++|+++++++++++.++
T Consensus         2 y~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999999999998999999999999999999999999999


Q ss_pred             cCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      | |++|+||||||+.. ..++.+.+.++|++++++|+.++|+++|+++|+|++++.|+||++||..+..+.++...|++|
T Consensus        82 ~-G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~as  160 (254)
T 4fn4_A           82 Y-SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVA  160 (254)
T ss_dssp             H-SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHH
T ss_pred             c-CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHH
Confidence            9 89999999999864 568999999999999999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+|+.+|+|+++.||+++|||||+|+||+++|++....................|++|+++|||||++++||+|+.++|+
T Consensus       161 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~i  240 (254)
T 4fn4_A          161 KHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFV  240 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999999998766554433322334445788999999999999999999999999


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      |||.|.||||+++
T Consensus       241 TG~~i~VDGG~t~  253 (254)
T 4fn4_A          241 NGDAVVVDGGLTV  253 (254)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCEEEeCCCccc
Confidence            9999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=6.8e-65  Score=424.25  Aligned_cols=252  Identities=30%  Similarity=0.449  Sum_probs=234.6

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      |+..++++||++|||||++|||+++|++|+++|++|++++|+++.+++.++++.+.+.++.++++|++|+++++++++++
T Consensus         1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~   80 (255)
T 4g81_D            1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKL   80 (255)
T ss_dssp             --CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999998999999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCCCCCCCCchhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      .+.+ |++|+||||||+...+++.+.+.++|++.+++|+.++|+++|+++|+|.++ +.|+||++||..+..+.|+...|
T Consensus        81 ~~~~-G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y  159 (255)
T 4g81_D           81 DAEG-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPY  159 (255)
T ss_dssp             HHTT-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHH
T ss_pred             HHHC-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhH
Confidence            9999 899999999999989999999999999999999999999999999999654 57999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+|+.+|+|+++.||+++|||||+|+||+++|++.....+.+...  .......|++|+++|||+|++++||+|+.+
T Consensus       160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~--~~~~~~~Pl~R~g~pediA~~v~fL~S~~a  237 (255)
T 4g81_D          160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFD--SWVKSSTPSQRWGRPEELIGTAIFLSSKAS  237 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHH--HHHHHHSTTCSCBCGGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHH--HHHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999999876544433222  455677999999999999999999999999


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      +|+|||.|.|||||+.
T Consensus       238 ~~iTG~~i~VDGG~~A  253 (255)
T 4g81_D          238 DYINGQIIYVDGGWLA  253 (255)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             CCCcCCEEEECCCeEe
Confidence            9999999999999974

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.3e-62  Score=407.03  Aligned_cols=245  Identities=28%  Similarity=0.404  Sum_probs=222.0

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      |...++|+||++|||||++|||+++|++|+++|++|++++|+.+  ++..+++.+.+.++.++++|++|+++++++++  
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~--   76 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT--   76 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST--
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH--
Confidence            44568999999999999999999999999999999999999865  46677888888999999999999999887663  


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y  168 (266)
                         + +++|+||||||+....++.+.+.++|++.+++|+.++|+++|+++|+|.+++ .|+||++||..+..+.++...|
T Consensus        77 ---~-g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y  152 (247)
T 4hp8_A           77 ---D-AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSY  152 (247)
T ss_dssp             ---T-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHH
T ss_pred             ---h-CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHH
Confidence               3 7899999999999889999999999999999999999999999999998764 7999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+|+.+|+|+++.||+++|||||+|+||+++|++.........  .........|++|+++|||||++++||+|+.+
T Consensus       153 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~--~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a  230 (247)
T 4hp8_A          153 TAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAA--RNKAILERIPAGRWGHSEDIAGAAVFLSSAAA  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHH--HHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHH--HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999999999998765433322  23556778999999999999999999999999


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      +|+|||.|.|||||+.
T Consensus       231 ~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          231 DYVHGAILNVDGGWLA  246 (247)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCcCCeEEECccccc
Confidence            9999999999999974

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=3.7e-61  Score=405.16  Aligned_cols=244  Identities=29%  Similarity=0.396  Sum_probs=220.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.+++.++++   +.++.++++|++|+++++++++++.+.+ 
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  101 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA-  101 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            389999999999999999999999999999999999999998888776   5688899999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      |+||+||||||+....++.+.+.++|++.+++|+.++|+++|+++|+|++  .|+||+++|..+..+.|+...|++||+|
T Consensus       102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaa  179 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAA  179 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHH
Confidence            89999999999998899999999999999999999999999999999965  4799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh---HHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL---VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      +.+|+|+++.||+++|||||+|+||+++|++.........   ...........|++|+++|||||++++||+|+.++|+
T Consensus       180 v~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~i  259 (273)
T 4fgs_A          180 LRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFV  259 (273)
T ss_dssp             HHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            9999999999999999999999999999998776543321   2223456677999999999999999999999999999


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      |||.|.||||++.
T Consensus       260 TG~~i~VDGG~s~  272 (273)
T 4fgs_A          260 TGAELFVDGGSAQ  272 (273)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             cCCeEeECcChhh
Confidence            9999999999985

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.6e-60  Score=399.31  Aligned_cols=248  Identities=29%  Similarity=0.340  Sum_probs=219.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+..+ ..+++.+.+.++.++++|++|+++++++++++.+.|
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            6799999999999999999999999999999999999887754 456666778899999999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       |++|+||||||+.... ..+.+.++|++.+++|+.++|+++|+++|+|+++ +|+||++||..+..+.++...|++||+
T Consensus        82 -G~iDiLVNnAGi~~~~-~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKa  158 (258)
T 4gkb_A           82 -GRLDGLVNNAGVNDGI-GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKG  158 (258)
T ss_dssp             -SCCCEEEECCCCCCCC-CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCC-CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHHH
Confidence             8999999999986544 4478999999999999999999999999999776 499999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch--hHHHHHHHHhcCCC-CCCCCccchHHHHHHHhcCCCCC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL--LVQEYVKLIAKTPL-ARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      |+.+|+|+++.||+++|||||+|+||+|+|++........  ......+.....|+ +|+++|||||++++||+|+.++|
T Consensus       159 av~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~  238 (258)
T 4gkb_A          159 AQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASH  238 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            9999999999999999999999999999999987654321  12234566778899 59999999999999999999999


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      +|||.|.||||||.-
T Consensus       239 iTG~~i~VDGG~T~l  253 (258)
T 4gkb_A          239 TTGEWLFVDGGYTHL  253 (258)
T ss_dssp             CCSCEEEESTTTTTS
T ss_pred             ccCCeEEECCCcchh
Confidence            999999999999854

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=8.6e-60  Score=389.32  Aligned_cols=234  Identities=36%  Similarity=0.597  Sum_probs=207.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++      ..+.++..+++|++|+++++++++    .+ +
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~-g   77 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----AL-P   77 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HC-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hc-C
Confidence            589999999999999999999999999999999999876542      234688999999999999988875    45 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|+||||||+..  ++++.+.++|++.+++|+.++|+++|+++|.|+++ .|+||++||..+..+.++...|++||+|+
T Consensus        78 ~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav  154 (242)
T 4b79_A           78 RLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAI  154 (242)
T ss_dssp             CCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHH
Confidence            9999999999864  56788999999999999999999999999999876 49999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccE
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV  255 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~  255 (266)
                      .+|+|+++.||+++|||||+|+||+++|+|........  +.........|++|+++|||||++++||+|+.++|+|||.
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~--~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~  232 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADV--EATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAV  232 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCH--HHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCce
Confidence            99999999999999999999999999999987654433  2235667789999999999999999999999999999999


Q ss_pred             EEeCCCccCC
Q 024551          256 ISIDGGYTAG  265 (266)
Q Consensus       256 l~vdgG~~~~  265 (266)
                      |.|||||+.+
T Consensus       233 l~VDGG~laA  242 (242)
T 4b79_A          233 LAVDGGYLCA  242 (242)
T ss_dssp             EEESTTGGGC
T ss_pred             EEECccHhhC
Confidence            9999999863

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=8.6e-58  Score=379.64  Aligned_cols=230  Identities=26%  Similarity=0.355  Sum_probs=210.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|++|||||++|||+++|++|+++|++|++++|+++.++++.+    .+.++.++++|++|+++++++++++.+++ +++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~i   76 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRI   76 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            4999999999999999999999999999999999887765544    35678899999999999999999999999 899


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |+||||||+...+++.+.+.++|++++++|+.++|+++|+++|+|.+++ |+||++||..+..+.|+...|++||+|+.+
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~  155 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVA  155 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence            9999999999889999999999999999999999999999999998875 999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEE
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS  257 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~  257 (266)
                      |+|++|.||++ |||||+|+||+++|++.....        .......|++|+++|||||++++||+|+  +|+|||.|.
T Consensus       156 ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~--------~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~  224 (247)
T 3ged_A          156 LTHALAMSLGP-DVLVNCIAPGWINVTEQQEFT--------QEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETII  224 (247)
T ss_dssp             HHHHHHHHHTT-TSEEEEEEECSBCCCC---CC--------HHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEE
T ss_pred             HHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHH--------HHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEE
Confidence            99999999997 899999999999999865543        2344578999999999999999999984  799999999


Q ss_pred             eCCCccC
Q 024551          258 IDGGYTA  264 (266)
Q Consensus       258 vdgG~~~  264 (266)
                      ||||++.
T Consensus       225 VDGG~s~  231 (247)
T 3ged_A          225 VDGGMSK  231 (247)
T ss_dssp             ESTTGGG
T ss_pred             ECcCHHH
Confidence            9999875

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=8.7e-58  Score=383.96  Aligned_cols=248  Identities=20%  Similarity=0.227  Sum_probs=225.5

Q ss_pred             cccCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        13 ~~~~~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      +++++||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++.+.+ .++.++++|++|+++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4789999999999865  99999999999999999999999999999999988765 48999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc
Q 024551           90 SSVFDGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL  165 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~  165 (266)
                      .+.+ |++|+||||||+...    .++.+.+.++|...+++|+.+++.+++.+.|+|++  .|+||++||..+..+.+++
T Consensus        81 ~~~~-G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~  157 (256)
T 4fs3_A           81 GKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNY  157 (256)
T ss_dssp             HHHH-CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTT
T ss_pred             HHHh-CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccc
Confidence            9999 899999999997643    45667899999999999999999999999887754  5899999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ..|++||+|+.+|+|+++.||+++|||||+|+||+++|++.......+  ..........|++|+++|||||++++||+|
T Consensus       158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~~~~~~~~~Pl~R~g~peevA~~v~fL~S  235 (256)
T 4fs3_A          158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFN--TILKEIKERAPLKRNVDQVEVGKTAAYLLS  235 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH--HHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999877654322  233566778999999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccCC
Q 024551          246 PAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +.++|+|||.|.|||||+.-
T Consensus       236 d~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          236 DLSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             chhcCccCCEEEECcCHHhc
Confidence            99999999999999999863

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=7.2e-58  Score=384.23  Aligned_cols=244  Identities=26%  Similarity=0.323  Sum_probs=215.3

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ||-..++++||++|||||++|||+++|++|+++|++|++++|+++.          ...+..++++|++|++++++++++
T Consensus         2 Mm~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~   71 (261)
T 4h15_A            2 MMIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEA   71 (261)
T ss_dssp             CCCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHH
T ss_pred             cchhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHH
Confidence            3445679999999999999999999999999999999999997642          123455789999999999999999


Q ss_pred             HHhhcCCcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-Cc
Q 024551           89 VSSVFDGKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-RL  165 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-~~  165 (266)
                      +.+++ |++|+||||||+..  .+++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||+++|..+..+.| +.
T Consensus        72 ~~~~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~  150 (261)
T 4h15_A           72 TRQRL-GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPEST  150 (261)
T ss_dssp             HHHHT-SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTC
T ss_pred             HHHHc-CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCcc
Confidence            99999 89999999999754  4578999999999999999999999999999999999899999999999998876 57


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc----------chhHHHHHHHHhcCCCCCCCCccc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN----------DLLVQEYVKLIAKTPLARSAEPNE  235 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~e  235 (266)
                      ..|++||+|+.+|+|+++.||+++|||||+|+||+++|++......          ..............|++|+++|||
T Consensus       151 ~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pee  230 (261)
T 4h15_A          151 TAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEE  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHH
Confidence            8999999999999999999999999999999999999987543211          111222234456789999999999


Q ss_pred             hHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          236 ISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       236 ia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ||++++||+|+.++|+|||.|.||||+.
T Consensus       231 vA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          231 VANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             HHHHHHHHhCchhcCccCcEEEECCcCc
Confidence            9999999999999999999999999985

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.2e-54  Score=367.70  Aligned_cols=252  Identities=28%  Similarity=0.438  Sum_probs=232.7

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ...++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.+.++.++++|++|+++++++++++.
T Consensus        19 ~~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           19 QIIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             CGGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            44578999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        99 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~a  177 (271)
T 4ibo_A           99 EQG-IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTV  177 (271)
T ss_dssp             HHT-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             HHC-CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHH
Confidence            998 7899999999998888899999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||+|+++|+++++.|++++|||||+|+||+++|++........  ..........|++|+.+|+|+|++++||+++.+++
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~  255 (271)
T 4ibo_A          178 AKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNP--EFDAWVKARTPAKRWGKPQELVGTAVFLSASASDY  255 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCH--HHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999999865432211  22244566789999999999999999999999999


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      +||+.|.+|||++..
T Consensus       256 itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          256 VNGQIIYVDGGMLSV  270 (271)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             CCCcEEEECCCeecc
Confidence            999999999998753

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.1e-54  Score=367.14  Aligned_cols=253  Identities=31%  Similarity=0.427  Sum_probs=232.2

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ...+++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+.++.++++|++|++++++++++
T Consensus        12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~   91 (266)
T 4egf_A           12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARR   91 (266)
T ss_dssp             BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            3556789999999999999999999999999999999999999999999998876 577899999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchh
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~  167 (266)
                      +.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...
T Consensus        92 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  170 (266)
T 4egf_A           92 AAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYA  170 (266)
T ss_dssp             HHHHH-TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChH
Confidence            99999 7899999999998888889999999999999999999999999999998765 689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++||+|+++|+++++.|++++|||||+|+||+++|++........  ..........|++|+.+|+|+|++++||+++.
T Consensus       171 Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~  248 (266)
T 4egf_A          171 YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDE--AKSAPMIARIPLGRFAVPHEVSDAVVWLASDA  248 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSH--HHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccCh--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999998765433222  22245667789999999999999999999999


Q ss_pred             CCCccccEEEeCCCccCC
Q 024551          248 ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~~  265 (266)
                      ++|+||+.|.+|||++++
T Consensus       249 ~~~itG~~i~vdGG~~~~  266 (266)
T 4egf_A          249 ASMINGVDIPVDGGYTMG  266 (266)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             hcCccCcEEEECCCccCC
Confidence            999999999999999874

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.1e-54  Score=365.15  Aligned_cols=252  Identities=28%  Similarity=0.380  Sum_probs=227.3

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-cCC-eeEEEeccCCCHHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGF-KVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-~~~-~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+ .+. ++.++++|++|+++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999999999999999876 333 59999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus        83 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (265)
T 3lf2_A           83 RTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA  161 (265)
T ss_dssp             HHH-CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence            999 7899999999998888899999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-----hHHHHHHHHh---cCCCCCCCCccchHHHHHH
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-----LVQEYVKLIA---KTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~eia~~~~~  242 (266)
                      ||+|+++|+++++.|++++|||||+|+||+++|++........     ....+.....   ..|++|+.+|+|+|++++|
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  241 (265)
T 3lf2_A          162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILF  241 (265)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999998754332210     1111222222   3899999999999999999


Q ss_pred             HhcCCCCCccccEEEeCCCccCC
Q 024551          243 LCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |+++.++|+||+.|.+|||++++
T Consensus       242 L~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          242 LASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HHSGGGTTCCSEEEEESSSCCCC
T ss_pred             HhCchhcCcCCCEEEECCCCcCC
Confidence            99999999999999999999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=3.2e-54  Score=362.35  Aligned_cols=250  Identities=32%  Similarity=0.483  Sum_probs=230.3

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ...++++||++|||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|+++++++++++.
T Consensus         5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            5 ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             -CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34577999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||.....++ +.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus        85 ~~~-g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  162 (256)
T 3gaf_A           85 DQF-GKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGS  162 (256)
T ss_dssp             HHH-SCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHH
Confidence            999 789999999999877777 889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||+++++|+++++.|++++|||||+|+||+++|++........   .........|++|+.+|+|+|++++||+++.++|
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~  239 (256)
T 3gaf_A          163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPE---IERAMLKHTPLGRLGEAQDIANAALFLCSPAAAW  239 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHH---HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHH---HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccC
Confidence            9999999999999999999999999999999998765433222   2245566789999999999999999999999999


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      +||+.|.+|||++..
T Consensus       240 itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          240 ISGQVLTVSGGGVQE  254 (256)
T ss_dssp             CCSCEEEESTTSCCC
T ss_pred             ccCCEEEECCCcccc
Confidence            999999999998753

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=4.5e-54  Score=362.61  Aligned_cols=249  Identities=31%  Similarity=0.428  Sum_probs=230.3

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ++++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+ .++.++++|++|+++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999999999999999998776 689999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYA  169 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y~  169 (266)
                      +.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+. .+.++...|+
T Consensus        84 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~  162 (262)
T 3pk0_A           84 EEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG  162 (262)
T ss_dssp             HHH-SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHH
T ss_pred             HHh-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhH
Confidence            999 78999999999988888999999999999999999999999999999998888999999999986 7889999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+++++|+++++.|++++|||||+|+||+++|++.....    ...........|++|+.+|+|+|++++||+++.++
T Consensus       163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~  238 (262)
T 3pk0_A          163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG----EEYIASMARSIPAGALGTPEDIGHLAAFLATKEAG  238 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999998755432    12234556778999999999999999999999999


Q ss_pred             CccccEEEeCCCccCC
Q 024551          250 YITGQVISIDGGYTAG  265 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~~  265 (266)
                      |+||+.|.+|||+++.
T Consensus       239 ~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          239 YITGQAIAVDGGQVLP  254 (262)
T ss_dssp             TCCSCEEEESTTTTCC
T ss_pred             CCcCCEEEECCCeecC
Confidence            9999999999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=6.9e-54  Score=358.67  Aligned_cols=246  Identities=30%  Similarity=0.432  Sum_probs=227.1

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +..++++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..   +..++++|++|+++++++++++.
T Consensus         2 ~~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            2 SQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             CCTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999999888887754   56789999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus        79 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (248)
T 3op4_A           79 DEF-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAA  157 (248)
T ss_dssp             HHH-CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHH
Confidence            999 7899999999998888889999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||+|+++|+++++.|++++|||||+|+||+++|++......    ..........|.+|+.+|+|+|++++||+++.+++
T Consensus       158 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~  233 (248)
T 3op4_A          158 AKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAY  233 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH----HHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCC
Confidence            99999999999999999999999999999999998765422    12244566789999999999999999999999999


Q ss_pred             ccccEEEeCCCccC
Q 024551          251 ITGQVISIDGGYTA  264 (266)
Q Consensus       251 ~~G~~l~vdgG~~~  264 (266)
                      +||+.|.+|||+++
T Consensus       234 itG~~i~vdgG~~~  247 (248)
T 3op4_A          234 ITGETLHVNGGMYM  247 (248)
T ss_dssp             CCSCEEEESTTSSC
T ss_pred             ccCcEEEECCCeec
Confidence            99999999999875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-53  Score=361.85  Aligned_cols=251  Identities=29%  Similarity=0.392  Sum_probs=229.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35889999999999999999999999999999999999999999999998878899999999999999999999999999


Q ss_pred             CCcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhhhhh
Q 024551           94 DGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAAS  171 (266)
Q Consensus        94 ~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y~~s  171 (266)
                       +++|+||||||+. ..+++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+. .+.++...|++|
T Consensus        84 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  162 (280)
T 3tox_A           84 -GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAAS  162 (280)
T ss_dssp             -SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHH
Confidence             7899999999987 4578889999999999999999999999999999999888999999999988 788899999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+|+++|+++++.|++++|||||+|+||+++|++....................|++|+.+|+|+|++++||+++.++|+
T Consensus       163 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~i  242 (280)
T 3tox_A          163 KAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFV  242 (280)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999999987653321112222445567899999999999999999999999999


Q ss_pred             cccEEEeCCCccCC
Q 024551          252 TGQVISIDGGYTAG  265 (266)
Q Consensus       252 ~G~~l~vdgG~~~~  265 (266)
                      ||+.|.+|||+++.
T Consensus       243 tG~~i~vdGG~~~~  256 (280)
T 3tox_A          243 TGAALLADGGASVT  256 (280)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCcEEEECCCcccc
Confidence            99999999999875

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.7e-53  Score=357.07  Aligned_cols=246  Identities=29%  Similarity=0.352  Sum_probs=228.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +||++|||||++|||++++++|+++|++|+++ +|+.+.++++.+++.+.+.++.++++|++|+++++++++++.+.+ +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-G   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            68999999999999999999999999999986 999999999999998888899999999999999999999999999 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||+++
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  161 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAAL  161 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence            89999999998888888999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccE
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV  255 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~  255 (266)
                      ++|+++++.|++++|||||+|+||+++|++........  ..........|++|+.+|+|+|++++||+++.++++||+.
T Consensus       162 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~  239 (258)
T 3oid_A          162 EALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRE--DLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQT  239 (258)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHH--HHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCE
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCE
Confidence            99999999999999999999999999999876543322  2234556678999999999999999999999999999999


Q ss_pred             EEeCCCccCC
Q 024551          256 ISIDGGYTAG  265 (266)
Q Consensus       256 l~vdgG~~~~  265 (266)
                      |.+|||+++.
T Consensus       240 i~vdGG~~~~  249 (258)
T 3oid_A          240 IIVDGGRSLL  249 (258)
T ss_dssp             EEESTTGGGB
T ss_pred             EEECCCccCC
Confidence            9999999864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1e-53  Score=365.81  Aligned_cols=257  Identities=31%  Similarity=0.389  Sum_probs=231.3

Q ss_pred             cCCCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHH
Q 024551            4 AAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQR   82 (266)
Q Consensus         4 ~~~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i   82 (266)
                      +..|.....+++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+ .++.++++|++|++++
T Consensus        27 ~~~~~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v  106 (293)
T 3rih_A           27 SAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSC  106 (293)
T ss_dssp             -------CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHH
T ss_pred             CCCCcccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHH
Confidence            445556666788999999999999999999999999999999999999999999999998776 6899999999999999


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CC
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-IS  161 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~  161 (266)
                      +++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+. .+
T Consensus       107 ~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~  185 (293)
T 3rih_A          107 ADAARTVVDAF-GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG  185 (293)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC
Confidence            99999999999 78999999999988888999999999999999999999999999999998888999999999986 78


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      .++...|++||+++++|+++++.|++++||+||+|+||+++|++.....    ...........|++|+.+|+|+|++++
T Consensus       186 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~p~~r~~~p~dvA~~v~  261 (293)
T 3rih_A          186 YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG----EEYISGMARSIPMGMLGSPVDIGHLAA  261 (293)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC----HHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc----HHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            8999999999999999999999999999999999999999998754332    122345567789999999999999999


Q ss_pred             HHhcCCCCCccccEEEeCCCccCC
Q 024551          242 FLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ||+++.++|+||+.|.+|||+++.
T Consensus       262 fL~s~~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          262 FLATDEAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTCB
T ss_pred             HHhCccccCCCCCEEEECCCccCC
Confidence            999999999999999999999864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-53  Score=364.24  Aligned_cols=253  Identities=28%  Similarity=0.360  Sum_probs=223.4

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|+++++++++++.
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  100 (283)
T 3v8b_A           21 QSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLV  100 (283)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45677899999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             hhcCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC--CCCCchh
Q 024551           91 SVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI--SIPRLSA  167 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~--~~~~~~~  167 (266)
                      +.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..  +.++...
T Consensus       101 ~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~  179 (283)
T 3v8b_A          101 LKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATA  179 (283)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHH
T ss_pred             HHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchH
Confidence            999 78999999999865 4788899999999999999999999999999999988889999999999987  7788999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHH---HHHHHhcCCC--CCCCCccchHHHHHH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQE---YVKLIAKTPL--ARSAEPNEISPLVAF  242 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~eia~~~~~  242 (266)
                      |++||+|+++|+++++.|++++|||||+|+||+++|++............   ........|+  +|+.+|||+|++++|
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~f  259 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRF  259 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999775432211110   0112233566  899999999999999


Q ss_pred             HhcCCCCCccccEEEeCCCccC
Q 024551          243 LCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      |+++.++|+||+.|.||||+++
T Consensus       260 L~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          260 LVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             HTSGGGTTCCSCEEEESTTHHH
T ss_pred             HcCccccCCcCCEEEECcCccc
Confidence            9999999999999999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=6.4e-53  Score=358.10  Aligned_cols=247  Identities=32%  Similarity=0.486  Sum_probs=227.4

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ..++++||++|||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCC--CCchhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISI--PRLSAY  168 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~--~~~~~y  168 (266)
                      .+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.  +....|
T Consensus       106 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  184 (276)
T 3r1i_A          106 EL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHY  184 (276)
T ss_dssp             HH-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchH
Confidence            99 7899999999998888888999999999999999999999999999998876 4899999999887654  367899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+++++|+++++.|++++|||||+|+||+++|++......  .   ........|++|+.+|||+|++++||+++.+
T Consensus       185 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~--~---~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~  259 (276)
T 3r1i_A          185 CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD--Y---HALWEPKIPLGRMGRPEELTGLYLYLASAAS  259 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG--G---HHHHGGGSTTSSCBCGGGSHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH--H---HHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999998765321  1   1344567899999999999999999999999


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      +|+||+.|.+|||+++
T Consensus       260 ~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          260 SYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             TTCCSCEEEESTTTTC
T ss_pred             cCccCcEEEECcCccC
Confidence            9999999999999985

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=8.5e-53  Score=359.06  Aligned_cols=249  Identities=24%  Similarity=0.335  Sum_probs=222.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC----------------hhHHHHHHHHHHhcCCeeEEEeccCC
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----------------QNMINERIQEWESKGFKVTGSVCDLS   77 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~D~~   77 (266)
                      .+++||++|||||++|||+++|++|+++|++|++++|+                .+.++++.+++...+.++.++++|++
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            35899999999999999999999999999999999887                78888888888888889999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCcccEEEeccccccccC-CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           78 FGDQREKLIETVSSVFDGKLNILVNNAALVVMKR-ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        78 ~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                      |+++++++++++.+.+ +++|+||||||+..... +.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||
T Consensus        87 ~~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           87 DYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             CHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHh-CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence            9999999999999999 78999999999876654 88899999999999999999999999999998765 689999999


Q ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc---------cchhH---HHHHHHHh
Q 024551          156 VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL---------NDLLV---QEYVKLIA  223 (266)
Q Consensus       156 ~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~---------~~~~~---~~~~~~~~  223 (266)
                      ..+..+.++...|++||+|+++|+++++.|++++|||||+|+||+++|++.....         .....   ........
T Consensus       166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (286)
T 3uve_A          166 VGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFH  245 (286)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTC
T ss_pred             hhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999876421         00111   11122334


Q ss_pred             cCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          224 KTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       224 ~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ..| +|+.+|+|+|++++||+++.++|+|||.|.||||+++
T Consensus       246 ~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          246 TLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            456 8999999999999999999999999999999999986

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2e-52  Score=358.96  Aligned_cols=256  Identities=27%  Similarity=0.374  Sum_probs=222.5

Q ss_pred             CccCCccc--cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC------------hhHHHHHHHHHHhcCCeeEEE
Q 024551            7 PVFGDKKW--SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD------------QNMINERIQEWESKGFKVTGS   72 (266)
Q Consensus         7 ~~~~~~~~--~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~   72 (266)
                      |...+..|  +++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.+.++.++
T Consensus        15 ~~~~p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (299)
T 3t7c_A           15 QTQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIAS   94 (299)
T ss_dssp             -------CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             cCCCCcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEE
Confidence            34444333  4799999999999999999999999999999999887            788888888888888899999


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEeccccccccC-CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeE
Q 024551           73 VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKR-ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASI  150 (266)
Q Consensus        73 ~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~i  150 (266)
                      ++|++|+++++++++++.+.+ +++|+||||||+..... +.+.+.++|++.+++|+.++++++++++|+|.+++ .|+|
T Consensus        95 ~~Dv~~~~~v~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~I  173 (299)
T 3t7c_A           95 QVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSI  173 (299)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEE
T ss_pred             ECCCCCHHHHHHHHHHHHHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEE
Confidence            999999999999999999999 78999999999886654 88899999999999999999999999999987764 7899


Q ss_pred             EEEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc---------c---hhHHHH
Q 024551          151 VFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN---------D---LLVQEY  218 (266)
Q Consensus       151 v~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~---------~---~~~~~~  218 (266)
                      |++||..+..+.++...|++||+|+++|+++++.|++++|||||+|+||+++|++......         .   ......
T Consensus       174 v~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (299)
T 3t7c_A          174 VFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVA  253 (299)
T ss_dssp             EEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH
T ss_pred             EEECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHH
Confidence            9999999999999999999999999999999999999999999999999999998754210         0   111111


Q ss_pred             HHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          219 VKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       219 ~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      .......| +|+.+|+|+|++++||+++.++|+||+.|.||||+++
T Consensus       254 ~~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          254 SRQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             HHHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            22344456 8899999999999999999999999999999999986

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.6e-53  Score=360.79  Aligned_cols=247  Identities=31%  Similarity=0.451  Sum_probs=229.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.++.+|++|+++++++++++.+.+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            45799999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.++...|++||+
T Consensus       104 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  182 (270)
T 3ftp_A          104 -GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKA  182 (270)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHH
Confidence             7899999999998888889999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      |+++|+++++.|++++||+||+|+||+++|++..... .   ..........|++|+.+|||+|++++||+++.++++||
T Consensus       183 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~---~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG  258 (270)
T 3ftp_A          183 GVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP-Q---EQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITG  258 (270)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC-H---HHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC-H---HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccC
Confidence            9999999999999999999999999999998754432 1   12244566789999999999999999999999999999


Q ss_pred             cEEEeCCCccCC
Q 024551          254 QVISIDGGYTAG  265 (266)
Q Consensus       254 ~~l~vdgG~~~~  265 (266)
                      ++|.+|||++++
T Consensus       259 ~~i~vdGG~~~s  270 (270)
T 3ftp_A          259 TTLHVNGGMFMS  270 (270)
T ss_dssp             CEEEESTTSSCC
T ss_pred             cEEEECCCcccC
Confidence            999999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=3.1e-53  Score=358.75  Aligned_cols=244  Identities=33%  Similarity=0.444  Sum_probs=227.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ++++||++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.+.+.++.++++|++|+++++++++++.+.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999888 778888888888888889999999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||
T Consensus       104 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  182 (269)
T 4dmm_A          104 W-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAK  182 (269)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHH
Confidence            9 789999999999888888899999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC-CCCCc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP-AASYI  251 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~-~~~~~  251 (266)
                      +|+++|+++++.|++++||+||+|+||+++|++.....     .  .......|++|+.+|+|+|++++||+++ .++|+
T Consensus       183 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-----~--~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~i  255 (269)
T 4dmm_A          183 AGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELA-----A--EKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYI  255 (269)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHH-----H--HHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGC
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccccc-----H--HHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCC
Confidence            99999999999999999999999999999999865421     1  3456678999999999999999999997 78999


Q ss_pred             cccEEEeCCCccCC
Q 024551          252 TGQVISIDGGYTAG  265 (266)
Q Consensus       252 ~G~~l~vdgG~~~~  265 (266)
                      ||+.|.+|||++++
T Consensus       256 tG~~i~vdGG~~~s  269 (269)
T 4dmm_A          256 TGQVINIDGGLVMA  269 (269)
T ss_dssp             CSCEEEESTTSCCC
T ss_pred             cCCEEEECCCeecC
Confidence            99999999999864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=5.7e-53  Score=358.58  Aligned_cols=256  Identities=28%  Similarity=0.415  Sum_probs=226.9

Q ss_pred             CccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 024551            7 PVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus         7 ~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      +....+.+++++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.++.++++|++|++++++++
T Consensus        16 ~~~~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           16 ENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             ------CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHH
T ss_pred             cccccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHH
Confidence            34445567899999999999999999999999999999999999999888877765   567899999999999999999


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCch
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  166 (266)
                      +++.+.+ +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++..
T Consensus        93 ~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  171 (277)
T 4dqx_A           93 EKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRT  171 (277)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCCh
Confidence            9999999 789999999999888889999999999999999999999999999999988889999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      .|++||+|+++|+++++.|++++|||||+|+||+++|++......  ..............|++|+.+|+|+|++++||+
T Consensus       172 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~  251 (277)
T 4dqx_A          172 AYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLA  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999987332111  111222234566789999999999999999999


Q ss_pred             cCCCCCccccEEEeCCCccCCC
Q 024551          245 LPAASYITGQVISIDGGYTAGN  266 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~~~~  266 (266)
                      ++.++++||+.|.+|||+++++
T Consensus       252 s~~~~~itG~~i~vdGG~~~~~  273 (277)
T 4dqx_A          252 SDRSRFATGSILTVDGGSSIGN  273 (277)
T ss_dssp             SGGGTTCCSCEEEESSSSSSCC
T ss_pred             CCccCCCcCCEEEECCchhhhh
Confidence            9999999999999999998763

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=5.4e-53  Score=356.39  Aligned_cols=249  Identities=22%  Similarity=0.293  Sum_probs=227.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|+++++++++++.+.+ 
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   86 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY-   86 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999999999999999999998888899999999999999999999999999 


Q ss_pred             CcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+.+++..|++||+
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa  165 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKS  165 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHH
Confidence            7899999999985 567888999999999999999999999999999998875 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-------hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-------LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      ++++|+++++.|++++|||||+|+||+++|++........       ............|++|+.+|+|+|++++||+++
T Consensus       166 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~  245 (264)
T 3ucx_A          166 ALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASD  245 (264)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999998765432111       122234556678999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccCC
Q 024551          247 AASYITGQVISIDGGYTAG  265 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~~  265 (266)
                      .++|+||++|.+|||++++
T Consensus       246 ~~~~itG~~i~vdGG~~~~  264 (264)
T 3ucx_A          246 LASGITGQALDVNCGEYKA  264 (264)
T ss_dssp             GGTTCCSCEEEESTTSSCC
T ss_pred             cccCCCCCEEEECCCccCC
Confidence            9999999999999999864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-52  Score=355.19  Aligned_cols=251  Identities=27%  Similarity=0.360  Sum_probs=223.3

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC------------hhHHHHHHHHHHhcCCeeEEEeccCCCH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD------------QNMINERIQEWESKGFKVTGSVCDLSFG   79 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~D~~~~   79 (266)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++++|++|+
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            3457899999999999999999999999999999999997            6777888888888888999999999999


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA  159 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~  159 (266)
                      ++++++++++.+.+ +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+.
T Consensus        84 ~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  162 (281)
T 3s55_A           84 AALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGH  162 (281)
T ss_dssp             HHHHHHHHHHHHHH-TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred             HHHHHHHHHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence            99999999999999 78999999999988888999999999999999999999999999999998888999999999999


Q ss_pred             CCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc---------cchhH---HHHHHHHhcCCC
Q 024551          160 ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL---------NDLLV---QEYVKLIAKTPL  227 (266)
Q Consensus       160 ~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~---------~~~~~---~~~~~~~~~~~~  227 (266)
                      .+.++...|++||+|+++|+++++.|++++|||||+|+||+++|++.....         .....   ..........+ 
T Consensus       163 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  241 (281)
T 3s55_A          163 SANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY-  241 (281)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS-
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC-
Confidence            999999999999999999999999999999999999999999999876421         00011   11111222334 


Q ss_pred             CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          228 ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       228 ~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +|+.+|+|+|++++||+++.++++||+.|.+|||+++
T Consensus       242 ~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          242 APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence            8999999999999999999999999999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-52  Score=356.11  Aligned_cols=251  Identities=33%  Similarity=0.450  Sum_probs=224.6

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      |...++++||++|||||++|||+++|++|+++|++|++++|+ +.+++..+++.+.+.++.++++|++|+++++++.+.+
T Consensus        23 m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (273)
T 3uf0_A           23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL  101 (273)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            445678999999999999999999999999999999999965 5667788888887889999999999999999995554


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                       +.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|+
T Consensus       102 -~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  179 (273)
T 3uf0_A          102 -AAT-RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYA  179 (273)
T ss_dssp             -HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHH
T ss_pred             -Hhc-CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHH
Confidence             455 789999999999888889999999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+|+++|+++++.|++++|||||+|+||+++|++........  ..........|++|+.+|+|+|++++||+++.++
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~  257 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADD--ERAAEITARIPAGRWATPEDMVGPAVFLASDAAS  257 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH--HHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCH--HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999998765432222  2234556678999999999999999999999999


Q ss_pred             CccccEEEeCCCccCC
Q 024551          250 YITGQVISIDGGYTAG  265 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~~  265 (266)
                      ++||+.|.+|||++++
T Consensus       258 ~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          258 YVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             CCcCCEEEECcCccCC
Confidence            9999999999999864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=8.6e-53  Score=353.80  Aligned_cols=249  Identities=27%  Similarity=0.402  Sum_probs=225.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++||++|||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+.+ 
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   81 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF-   81 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999999999999999999998878899999999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHH-hcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLK-ASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|. +++.|+||++||..+..+.++...|++||+
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  161 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKA  161 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHH
Confidence            7899999999998888889999999999999999999999999999994 445799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhc-cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          174 AINQLTKNLACEWA-TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       174 al~~~~~~~a~el~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      |+++|+++++.|++ ++|||||+|+||+++|++........ ...........|++|+.+|||+|++++||+++.++|+|
T Consensus       162 a~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  240 (257)
T 3imf_A          162 GVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWIS-EEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYIN  240 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            99999999999998 77999999999999999765432110 01113445678999999999999999999999999999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      |+.|.+|||+++.
T Consensus       241 G~~i~vdGG~~~~  253 (257)
T 3imf_A          241 GTCMTMDGGQHLH  253 (257)
T ss_dssp             SCEEEESTTTTSC
T ss_pred             CCEEEECCCcccC
Confidence            9999999999875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=4.4e-53  Score=353.62  Aligned_cols=245  Identities=26%  Similarity=0.377  Sum_probs=222.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++||++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++++|++|+++++++++++.+.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            3588999999999999999999999999999999999999988887776   5689999999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.++...|++||
T Consensus        79 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (247)
T 3rwb_A           79 -GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK  157 (247)
T ss_dssp             -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence             7899999999998888889999999999999999999999999999998876 69999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +|+++|+++++.|++++|||||+|+||+++|++..........   .......|++|..+|||+|++++||+++.++|+|
T Consensus       158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~it  234 (247)
T 3rwb_A          158 GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAF---GFVEMLQAMKGKGQPEHIADVVSFLASDDARWIT  234 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGH---HHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHH---HHHhcccccCCCcCHHHHHHHHHHHhCccccCCC
Confidence            9999999999999999999999999999999876553322211   1122237899999999999999999999999999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      |+.|.+|||++.+
T Consensus       235 G~~i~vdGG~~~~  247 (247)
T 3rwb_A          235 GQTLNVDAGMVRH  247 (247)
T ss_dssp             SCEEEESTTSSCC
T ss_pred             CCEEEECCCccCC
Confidence            9999999999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=6.6e-53  Score=356.19  Aligned_cols=245  Identities=26%  Similarity=0.356  Sum_probs=213.4

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ++++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.++++|++|+++++++++++.+
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999999888877655   56899999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ +++|+||||||+...+++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++...|++|
T Consensus        98 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  176 (266)
T 3grp_A           98 EM-EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAA  176 (266)
T ss_dssp             HH-TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHH
Confidence            99 78999999999988888889999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+|+++|+++++.|++++|||||+|+||+++|++..... .   ..........|++|+.+|||+|++++||+++.++|+
T Consensus       177 Kaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-~---~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~i  252 (266)
T 3grp_A          177 KAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN-E---KQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYL  252 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC-H---HHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC-H---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999999999999999998765432 1   222455677899999999999999999999999999


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      ||++|.+|||+++
T Consensus       253 tG~~i~vdGG~~~  265 (266)
T 3grp_A          253 TGQTLHINGGMAM  265 (266)
T ss_dssp             CSCEEEESTTC--
T ss_pred             cCCEEEECCCeee
Confidence            9999999999875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1e-52  Score=357.56  Aligned_cols=254  Identities=28%  Similarity=0.395  Sum_probs=222.1

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-------------ChhHHHHHHHHHHhcCCeeEEEecc
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-------------DQNMINERIQEWESKGFKVTGSVCD   75 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~D   75 (266)
                      ++..+.+++||++|||||++|||+++|++|+++|++|++++|             +++.++++.+++.+.+.++.++++|
T Consensus         6 ~~~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (280)
T 3pgx_A            6 VAGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLD   85 (280)
T ss_dssp             -----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             hhccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcC
Confidence            444556799999999999999999999999999999999988             7888899999998888899999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEe
Q 024551           76 LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMS  154 (266)
Q Consensus        76 ~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vs  154 (266)
                      ++|+++++++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++|
T Consensus        86 v~~~~~v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (280)
T 3pgx_A           86 VRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVS  164 (280)
T ss_dssp             TTCHHHHHHHHHHHHHHH-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEc
Confidence            999999999999999999 7899999999998888899999999999999999999999999999998875 78999999


Q ss_pred             cCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHH------HHhcCCCC
Q 024551          155 SVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK------LIAKTPLA  228 (266)
Q Consensus       155 s~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~  228 (266)
                      |..+..+.++...|++||+|+++|+++++.|++++|||||+|+||+++|++...............      .....|. 
T Consensus       165 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  243 (280)
T 3pgx_A          165 SSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-  243 (280)
T ss_dssp             CGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-
T ss_pred             chhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-
Confidence            999999999999999999999999999999999999999999999999998754211000000000      1112344 


Q ss_pred             CCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          229 RSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      |+.+|+|+|++++||+++.++|+||+.|.+|||++.
T Consensus       244 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          244 GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            788999999999999999999999999999999874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=8.4e-53  Score=357.95  Aligned_cols=248  Identities=29%  Similarity=0.406  Sum_probs=225.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.+.++.++++|++|+++++++++++.+.+ +
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-G  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            589999999999999999999999999999999999999999999998888899999999999999999999999999 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHH--HHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP--LLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      ++|+||||||....+++.+.+.++|++.+++|+.++++++++++|  .|++++.|+||++||..+..+.++...|++||+
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKa  180 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKH  180 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHH
Confidence            999999999998888889999999999999999999999999999  588777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-------chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-------DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      |+++|+++++.|++++|||||+|+||+++|++......       ..............|++|+.+|||+|++++||+++
T Consensus       181 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  260 (279)
T 3sju_A          181 GVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTD  260 (279)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999987543110       01122334556778999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccC
Q 024551          247 AASYITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~  264 (266)
                      .++++||+.|.||||++.
T Consensus       261 ~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          261 AAASITAQALNVCGGLGN  278 (279)
T ss_dssp             GGGGCCSCEEEESTTCCC
T ss_pred             cccCcCCcEEEECCCccC
Confidence            999999999999999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=2.3e-52  Score=348.95  Aligned_cols=244  Identities=31%  Similarity=0.437  Sum_probs=225.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +.+|++|||||++|||++++++|+++|++|++++| +.+.++++.+++.+.+.++.++++|++|+++++++++++.+.+ 
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   80 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-   80 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            46899999999999999999999999999988776 6788888899998888899999999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||++
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAG  160 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence            78999999999988888899999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++|+++++.|++++||+||+|+||+++|++.....+    ..........|++|+.+|+|+|++++||+++.++++||+
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~  236 (246)
T 3osu_A          161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD----ELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQ  236 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCH----HHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCC
Confidence            9999999999999999999999999999998765422    122455667899999999999999999999999999999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      .|.+|||+++
T Consensus       237 ~i~vdgG~~~  246 (246)
T 3osu_A          237 TIHVNGGMYM  246 (246)
T ss_dssp             EEEESTTSCC
T ss_pred             EEEeCCCccC
Confidence            9999999874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.1e-52  Score=354.75  Aligned_cols=251  Identities=29%  Similarity=0.411  Sum_probs=218.7

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ++++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.+. +.++.++++|++|+++++++++++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999 677888888888765 5789999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus       100 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  178 (281)
T 3v2h_A          100 DRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVA  178 (281)
T ss_dssp             HHT-SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HHC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHH
Confidence            999 7899999999998888889999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhH------HH--HHHHHhcCCCCCCCCccchHHHHHH
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV------QE--YVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      ||+|+++|+++++.|++++||+||+|+||+++|++..........      .+  ........|++|+.+|+|+|++++|
T Consensus       179 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~  258 (281)
T 3v2h_A          179 AKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALY  258 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Confidence            999999999999999999999999999999999987654332110      00  1124456799999999999999999


Q ss_pred             HhcCCCCCccccEEEeCCCccC
Q 024551          243 LCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      |+++.++++||+.|.+|||+++
T Consensus       259 L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          259 LAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHSSGGGGCCSCEEEESTTGGG
T ss_pred             HcCCCcCCCCCcEEEECCCccC
Confidence            9999999999999999999975

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-52  Score=355.58  Aligned_cols=247  Identities=27%  Similarity=0.378  Sum_probs=204.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.+.+.++.++++|++|+++++++++++.+.
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999985 888889999999888889999999999999999999999999


Q ss_pred             cCCcccEEEecccc--ccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC---CCeEEEEecCCCCCCCCCchh
Q 024551           93 FDGKLNILVNNAAL--VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG---NASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        93 ~~~~id~lv~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~~~~  167 (266)
                      + +++|+||||||+  ....++.+.+.++|++.+++|+.++++++++++|.|++++   .|+||++||..+..+.++...
T Consensus       105 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~  183 (280)
T 4da9_A          105 F-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLD  183 (280)
T ss_dssp             H-SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHH
T ss_pred             c-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccH
Confidence            9 789999999998  4567788999999999999999999999999999998765   689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh-cCCCCCCCCccchHHHHHHHhcC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA-KTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      |++||+|+++|+++++.|++++|||||+|+||+++|++........ .   ..... ..|++|+.+|||+|++++||+++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~---~~~~~~~~p~~r~~~pedvA~~v~~L~s~  259 (280)
T 4da9_A          184 YCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY-D---GLIESGLVPMRRWGEPEDIGNIVAGLAGG  259 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CCBCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH-H---HHHhhcCCCcCCcCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999876542211 1   12222 57899999999999999999999


Q ss_pred             CCCCccccEEEeCCCccCC
Q 024551          247 AASYITGQVISIDGGYTAG  265 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~~  265 (266)
                      .++++||+.|.+|||++++
T Consensus       260 ~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          260 QFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             TTGGGTTCEEEESTTCC--
T ss_pred             cccCCCCCEEEECCCcccC
Confidence            9999999999999999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.6e-52  Score=356.53  Aligned_cols=250  Identities=28%  Similarity=0.381  Sum_probs=227.8

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC---eeEEEeccCCCHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF---KVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.+.   ++.++++|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999999999987655   8999999999999999999999


Q ss_pred             HhhcCCcccEEEecccc-ccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           90 SSVFDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      .+.+ +++|+||||||. ...+++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.++...|
T Consensus        86 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  164 (281)
T 3svt_A           86 TAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAY  164 (281)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhH
Confidence            9999 789999999998 45667889999999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+++++|+++++.|++++|||||+|+||+++|++........  ..........|++|+.+|+|+|++++||+++.+
T Consensus       165 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~  242 (281)
T 3svt_A          165 GVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESA--ELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAA  242 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCH--HHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCH--HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999999865432221  222455667899999999999999999999999


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      +++||+.|.+|||+++.
T Consensus       243 ~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          243 SFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             TTCCSCEEEESTTGGGS
T ss_pred             CCCCCCEEEeCCChhcc
Confidence            99999999999999864

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=3.2e-52  Score=352.74  Aligned_cols=248  Identities=28%  Similarity=0.396  Sum_probs=222.0

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +.+++||++|||||++|||+++|++|+++|++|+++++ +.+.++++.+++.+.+.++.++++|++|+++++++++++.+
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999998765 67778888899988888999999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC-CCCCCCCchhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA-GAISIPRLSAYAA  170 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~-~~~~~~~~~~y~~  170 (266)
                      .+ +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||.. +..+.++...|++
T Consensus        93 ~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~a  169 (270)
T 3is3_A           93 HF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSG  169 (270)
T ss_dssp             HH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHH
Confidence            99 78999999999988888999999999999999999999999999999976  58999999988 5678889999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc--------cchhHHHHHHHHhcCCCCCCCCccchHHHHHH
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL--------NDLLVQEYVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      ||+|+++|+++++.|++++|||||+|+||+++|++.....        ...............|++|+.+|+|+|++++|
T Consensus       170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  249 (270)
T 3is3_A          170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGF  249 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999865211        01112222445567899999999999999999


Q ss_pred             HhcCCCCCccccEEEeCCCcc
Q 024551          243 LCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      |+++.++|+||++|.+|||+.
T Consensus       250 L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          250 LVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HTSGGGTTCCSCEEEESTTCC
T ss_pred             HcCCccCCccCcEEEeCCCCC
Confidence            999999999999999999974

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=6.8e-53  Score=357.76  Aligned_cols=249  Identities=29%  Similarity=0.365  Sum_probs=225.1

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ...++++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.
T Consensus        26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            34467899999999999999999999999999999999999999999999998888899999999999999999999998


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.  +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.+....|++
T Consensus       106 ~~--g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  183 (275)
T 4imr_A          106 AI--APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAA  183 (275)
T ss_dssp             HH--SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             Hh--CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHH
Confidence            86  6899999999998888889999999999999999999999999999999888899999999999998888899999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC-CCCCCCCccchHHHHHHHhcCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-PLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      ||+|+++|+++++.|++++|||||+|+||+++|++....... ....+....... |++|+.+|||+|++++||+++.++
T Consensus       184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~  262 (275)
T 4imr_A          184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQ-DPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACS  262 (275)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHH-CHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccccccc-ChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccC
Confidence            999999999999999999999999999999999875432211 112223333334 899999999999999999999999


Q ss_pred             CccccEEEeCCCc
Q 024551          250 YITGQVISIDGGY  262 (266)
Q Consensus       250 ~~~G~~l~vdgG~  262 (266)
                      |+||+.|.||||+
T Consensus       263 ~itG~~i~vdGG~  275 (275)
T 4imr_A          263 FMTGETIFLTGGY  275 (275)
T ss_dssp             TCCSCEEEESSCC
T ss_pred             CCCCCEEEeCCCC
Confidence            9999999999996

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=3.6e-52  Score=349.65  Aligned_cols=244  Identities=29%  Similarity=0.392  Sum_probs=221.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++||++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++++|++|+++++++++++.+.+ 
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL-   80 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh-
Confidence            588999999999999999999999999999999999999988888776   4578999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..+.++...|++||++
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa  158 (255)
T 4eso_A           81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAA  158 (255)
T ss_dssp             SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHH
Confidence            78999999999988888999999999999999999999999999999966  4799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-chhHH-HHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-DLLVQ-EYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++|+++++.|++++|||||+|+||+++|++...... ..... .........|++|+.+|||+|++++||+++ ++|+|
T Consensus       159 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~it  237 (255)
T 4eso_A          159 LVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTT  237 (255)
T ss_dssp             HHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTCC
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCcc
Confidence            9999999999999999999999999999998764322 21111 123345568999999999999999999998 89999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      |+.|.+|||++..
T Consensus       238 G~~i~vdGG~~~~  250 (255)
T 4eso_A          238 GAKLAVDGGLGQK  250 (255)
T ss_dssp             SCEEEESTTTTTT
T ss_pred             CCEEEECCCcccc
Confidence            9999999998753

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-51  Score=349.10  Aligned_cols=256  Identities=54%  Similarity=0.924  Sum_probs=223.2

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      +...++++||+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++
T Consensus        13 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   92 (273)
T 1ae1_A           13 NEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTV   92 (273)
T ss_dssp             ---CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            34567799999999999999999999999999999999999999999888888877778999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      .+.+++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|+
T Consensus        93 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  172 (273)
T 1ae1_A           93 AHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYS  172 (273)
T ss_dssp             HHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhH
Confidence            99874589999999999877788899999999999999999999999999999887789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +||+++++|+++++.|++++||+||+|+||+++|++.......  .............|++|+.+|+|+|++++||+++.
T Consensus       173 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  252 (273)
T 1ae1_A          173 ASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPA  252 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999986543220  01111233445679999999999999999999999


Q ss_pred             CCCccccEEEeCCCccCC
Q 024551          248 ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~~  265 (266)
                      .+++||+.|.+|||+++.
T Consensus       253 ~~~~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          253 ASYITGQIIWADGGFTAN  270 (273)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             ccCcCCCEEEECCCcccC
Confidence            999999999999998764

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.6e-51  Score=347.50  Aligned_cols=259  Identities=27%  Similarity=0.329  Sum_probs=227.2

Q ss_pred             CcccCCCccCCccccCCCCEEEEecCC-CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCC
Q 024551            1 MAEAAEPVFGDKKWSLRGMTALVTGGT-RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSF   78 (266)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~k~vlItGas-~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~   78 (266)
                      |.+++.|..+++.++++||++|||||+ +|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++++|++|
T Consensus         5 ~~~~~~~~~~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~   84 (266)
T 3o38_A            5 MNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS   84 (266)
T ss_dssp             -CTTSCCCCCCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC
T ss_pred             cccccCccccccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC
Confidence            455677777778888999999999997 699999999999999999999999999999999987654 689999999999


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           79 GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        79 ~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                      +++++++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.+++++++.++|+|+++ +.++||++||..
T Consensus        85 ~~~v~~~~~~~~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~  163 (266)
T 3o38_A           85 TEAVDALITQTVEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVL  163 (266)
T ss_dssp             HHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHh-CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHH
Confidence            999999999999998 789999999999888888899999999999999999999999999999886 578999999999


Q ss_pred             CCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchH
Q 024551          158 GAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEIS  237 (266)
Q Consensus       158 ~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia  237 (266)
                      +..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++........   .........|++|+.+|+|+|
T Consensus       164 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~r~~~~~dva  240 (266)
T 3o38_A          164 GWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSE---LLDRLASDEAFGRAAEPWEVA  240 (266)
T ss_dssp             GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------CCTTSSCCCHHHHH
T ss_pred             HcCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHH---HHHHHHhcCCcCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999876543322   123445667899999999999


Q ss_pred             HHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          238 PLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++++||+++.+.++||++|.+|||++
T Consensus       241 ~~i~~l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          241 ATIAFLASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSCCC
T ss_pred             HHHHHHcCccccCccCCEEEEcCCcC
Confidence            99999999999999999999999985

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-52  Score=351.97  Aligned_cols=245  Identities=28%  Similarity=0.383  Sum_probs=214.7

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .|.++||++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++...+.++.++++|++|+++++++++++.+
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999987 6678888888888888888999999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++...|++|
T Consensus       102 ~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  178 (267)
T 3u5t_A          102 AF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAA  178 (267)
T ss_dssp             HH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHH
Confidence            99 78999999999988888999999999999999999999999999999965  4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+|+++|+++++.|++++|||||+|+||+++|++.........   ........|++|+.+|+|+|++++||+++.++|+
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i  255 (267)
T 3u5t_A          179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEV---RDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWV  255 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------C---HHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTC
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            9999999999999999999999999999999998765332221   2345567899999999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 024551          252 TGQVISIDGGYT  263 (266)
Q Consensus       252 ~G~~l~vdgG~~  263 (266)
                      ||+.|.+|||+.
T Consensus       256 tG~~i~vdGG~~  267 (267)
T 3u5t_A          256 NGQVLRANGGII  267 (267)
T ss_dssp             CSEEEEESSSCC
T ss_pred             cCCEEEeCCCcC
Confidence            999999999973

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.6e-52  Score=355.81  Aligned_cols=249  Identities=24%  Similarity=0.364  Sum_probs=226.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ..++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++++|++|+++++++++++.+.
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            347999999999999999999999999999999999999999888888764 3678999999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.++...|++||
T Consensus       103 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (277)
T 4fc7_A          103 F-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAK  181 (277)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            9 789999999998888888899999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +|+++|+++++.|++++|||||+|+||+++|++........ ...........|++|+.+|+|+|++++||+++.++|+|
T Consensus       182 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~it  260 (277)
T 4fc7_A          182 AAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP-QASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVT  260 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCC-HHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCC-HHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcC
Confidence            99999999999999999999999999999997533221111 12234556778999999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |++|.+|||+++
T Consensus       261 G~~i~vdGG~~~  272 (277)
T 4fc7_A          261 GAVLVADGGAWL  272 (277)
T ss_dssp             SCEEEESTTHHH
T ss_pred             CCEEEECCCccc
Confidence            999999999865

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=9.7e-52  Score=347.87  Aligned_cols=251  Identities=31%  Similarity=0.432  Sum_probs=210.4

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ..|++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++++|++|+++++++++++.+
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999999988888766   55789999999999999999999999


Q ss_pred             hcCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC----CCeEEEEecCCCCCCCCCch
Q 024551           92 VFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG----NASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~----~g~iv~vss~~~~~~~~~~~  166 (266)
                      .+ +++|+||||||... ..++.+.+.++|++.+++|+.+++++++.++|+|++++    .++||++||..+..+.+...
T Consensus        80 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  158 (261)
T 3n74_A           80 KF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLA  158 (261)
T ss_dssp             HH-SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCH
T ss_pred             hc-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCcc
Confidence            98 78999999999875 56778889999999999999999999999999998763    67899999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++....................|++|+.+|||+|++++||+++
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  238 (261)
T 3n74_A          159 WYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSP  238 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999887654333333334556678999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccCCC
Q 024551          247 AASYITGQVISIDGGYTAGN  266 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~~~  266 (266)
                      ..+++||++|.+|||+++++
T Consensus       239 ~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          239 QASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             GGTTCCSCEEEESTTTTC--
T ss_pred             cccCcCCcEEEecCCcccCC
Confidence            99999999999999998863

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=8e-52  Score=348.24  Aligned_cols=248  Identities=28%  Similarity=0.340  Sum_probs=223.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++.+.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   80 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA   80 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence            3588999999999999999999999999999999999999988888776   4578899999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++||
T Consensus        81 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (259)
T 4e6p_A           81 -GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATK  159 (259)
T ss_dssp             -SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHH
Confidence             7899999999998888889999999999999999999999999999998765 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-------chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-------DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      +++++|+++++.|++++|||||+|+||+++|++......       ..............|++|+.+|+|+|++++||++
T Consensus       160 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s  239 (259)
T 4e6p_A          160 AAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLAS  239 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999997543200       0001112344566899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccCC
Q 024551          246 PAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +.++|+||+.|.+|||++++
T Consensus       240 ~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          240 AESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             GGGTTCCSCEEEESTTSSCC
T ss_pred             CccCCCCCCEEEECcChhcC
Confidence            99999999999999999864

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.2e-51  Score=353.76  Aligned_cols=253  Identities=20%  Similarity=0.232  Sum_probs=223.6

Q ss_pred             CccCCccccCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH
Q 024551            7 PVFGDKKWSLRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus         7 ~~~~~~~~~~~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~   84 (266)
                      |-.|.+.++++||++|||||++  |||+++|++|+++|++|++++|+++..+.+.+...+. +.+.++++|++|++++++
T Consensus        19 p~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~   97 (296)
T 3k31_A           19 PGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDN   97 (296)
T ss_dssp             --CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHH
T ss_pred             CccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHH
Confidence            4456667889999999999996  9999999999999999999999987655555544443 357899999999999999


Q ss_pred             HHHHHHhhcCCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC
Q 024551           85 LIETVSSVFDGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI  160 (266)
Q Consensus        85 ~~~~~~~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~  160 (266)
                      +++++.+.+ +++|+||||||+...    .++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..
T Consensus        98 ~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~  174 (296)
T 3k31_A           98 MFKVLAEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEK  174 (296)
T ss_dssp             HHHHHHHHH-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTS
T ss_pred             HHHHHHHHc-CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhcc
Confidence            999999999 789999999998764    67888999999999999999999999999999976  58999999999999


Q ss_pred             CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHH
Q 024551          161 SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV  240 (266)
Q Consensus       161 ~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~  240 (266)
                      +.+++..|++||+|+++|+++++.|++++|||||+|+||+++|++.......  ...........|++|+.+|||+|+++
T Consensus       175 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v  252 (296)
T 3k31_A          175 VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDF--HYILTWNKYNSPLRRNTTLDDVGGAA  252 (296)
T ss_dssp             CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHH--HHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccch--HHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999999999987654221  22234556678999999999999999


Q ss_pred             HHHhcCCCCCccccEEEeCCCccCC
Q 024551          241 AFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       241 ~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +||+++.++|+||+.|.||||+++.
T Consensus       253 ~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          253 LYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHcCCccCCccCCEEEECCCcccc
Confidence            9999999999999999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=6.4e-52  Score=352.11  Aligned_cols=248  Identities=29%  Similarity=0.406  Sum_probs=220.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-------------ChhHHHHHHHHHHhcCCeeEEEeccCCCHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-------------DQNMINERIQEWESKGFKVTGSVCDLSFGDQ   81 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~   81 (266)
                      +++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++...+.++.++++|++|+++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            589999999999999999999999999999999988             7788888888888888899999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCC
Q 024551           82 REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAI  160 (266)
Q Consensus        82 i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~  160 (266)
                      ++++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..
T Consensus        88 v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           88 LRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            999999999999 7899999999998888888999999999999999999999999999998875 68999999999999


Q ss_pred             CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHH-------HHHHhcCCCCCCCCc
Q 024551          161 SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEY-------VKLIAKTPLARSAEP  233 (266)
Q Consensus       161 ~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~  233 (266)
                      +.++...|++||+++++|+++++.|++++|||||+|+||+++|++.............       .......|. |+.+|
T Consensus       167 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~p  245 (277)
T 3tsc_A          167 MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVAEP  245 (277)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCBCH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCCCH
Confidence            9999999999999999999999999999999999999999999986542111100000       011122344 78999


Q ss_pred             cchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          234 NEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       234 ~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ||+|++++||+++.++|+||+.|.||||+++
T Consensus       246 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          246 EDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            9999999999999999999999999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-51  Score=343.40  Aligned_cols=247  Identities=29%  Similarity=0.415  Sum_probs=229.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999999999999999998888899999999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||+....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...|++||+
T Consensus        81 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (247)
T 3lyl_A           81 -LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA  159 (247)
T ss_dssp             -CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence             7899999999998888888999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      ++++|+++++.|++++||+||+|+||+++|++.....+.    .........|.+|+.+|||+|++++||+++...++||
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG  235 (247)
T 3lyl_A          160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDE----QKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITG  235 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHH----HHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHH----HHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccC
Confidence            999999999999999999999999999999987764321    1234556789999999999999999999999999999


Q ss_pred             cEEEeCCCccCC
Q 024551          254 QVISIDGGYTAG  265 (266)
Q Consensus       254 ~~l~vdgG~~~~  265 (266)
                      +.|.+|||+++.
T Consensus       236 ~~i~vdgG~~~~  247 (247)
T 3lyl_A          236 QTLHVNGGMYMA  247 (247)
T ss_dssp             CEEEESTTSSCC
T ss_pred             CEEEECCCEecC
Confidence            999999999863

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.2e-52  Score=356.46  Aligned_cols=248  Identities=29%  Similarity=0.389  Sum_probs=220.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++++|++|+++++++++++.+.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999999988888776   5688999999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus       102 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  180 (277)
T 3gvc_A          102 -GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKA  180 (277)
T ss_dssp             -SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHH
Confidence             7899999999998888899999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc---hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND---LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      |+++|+++++.|++++||+||+|+||+++|++.......   .............|++|+.+|||+|++++||+++.+++
T Consensus       181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~  260 (277)
T 3gvc_A          181 GIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASM  260 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCC
Confidence            999999999999999999999999999999875432110   10010111112356789999999999999999999999


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      +||+.|.+|||++..
T Consensus       261 itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          261 ITGTTQIADGGTIAA  275 (277)
T ss_dssp             CCSCEEEESTTGGGS
T ss_pred             ccCcEEEECCcchhc
Confidence            999999999999764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-51  Score=346.53  Aligned_cols=243  Identities=31%  Similarity=0.420  Sum_probs=221.3

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .++++||++|||||++|||+++|++|+++|++|+++++ +.+.++++.+++.+.+.++.++++|++|+++++++++++.+
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999998855 56778888899988888999999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-CCCchhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-IPRLSAYAA  170 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-~~~~~~y~~  170 (266)
                      .+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+... .++...|++
T Consensus       106 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~a  182 (271)
T 3v2g_A          106 AL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSA  182 (271)
T ss_dssp             HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHH
T ss_pred             Hc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHH
Confidence            99 78999999999988888999999999999999999999999999999965  589999999777655 788999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||+|+++|+++++.|++++|||||+|+||+++|++.......     ........|++|+.+|||+|++++||+++.+++
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~  257 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDH-----AEAQRERIATGSYGEPQDIAGLVAWLAGPQGKF  257 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSS-----HHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchh-----HHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            999999999999999999999999999999999987653221     134456789999999999999999999999999


Q ss_pred             ccccEEEeCCCcc
Q 024551          251 ITGQVISIDGGYT  263 (266)
Q Consensus       251 ~~G~~l~vdgG~~  263 (266)
                      +||+.|.||||++
T Consensus       258 itG~~i~vdGG~~  270 (271)
T 3v2g_A          258 VTGASLTIDGGAN  270 (271)
T ss_dssp             CCSCEEEESTTTT
T ss_pred             ccCCEEEeCcCcc
Confidence            9999999999986

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-51  Score=347.44  Aligned_cols=243  Identities=30%  Similarity=0.390  Sum_probs=221.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++++|++|+++++++++++.+.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999999988888776   5678899999999999999999999999


Q ss_pred             CCcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           94 DGKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        94 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                       +++|+||||||...  ...+.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus        84 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  162 (271)
T 3tzq_B           84 -GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACT  162 (271)
T ss_dssp             -SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHH
Confidence             78999999999873  456778899999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+++++|+++++.|++++|||||+|+||+++|++........   .........|++|+.+|+|+|++++||+++.++++
T Consensus       163 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~i  239 (271)
T 3tzq_B          163 KAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQP---IVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFI  239 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHH---HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCc
Confidence            999999999999999999999999999999999877544322   22445667899999999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 024551          252 TGQVISIDGGYT  263 (266)
Q Consensus       252 ~G~~l~vdgG~~  263 (266)
                      ||++|.+|||+.
T Consensus       240 tG~~i~vdGG~~  251 (271)
T 3tzq_B          240 TGQVIAADSGLL  251 (271)
T ss_dssp             CSCEEEESTTTT
T ss_pred             CCCEEEECCCcc
Confidence            999999999943

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-51  Score=347.99  Aligned_cols=253  Identities=27%  Similarity=0.365  Sum_probs=223.8

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.  +.++.++++|++|+++++++++++
T Consensus         7 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   86 (267)
T 1iy8_A            7 PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT   86 (267)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999999998888888765  668999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           90 SSVFDGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      .+.+ +++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++...|
T Consensus        87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (267)
T 1iy8_A           87 TERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGY  165 (267)
T ss_dssp             HHHH-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccH
Confidence            9998 789999999998766 77888999999999999999999999999999988778999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC--c-cchhHH-HHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD--L-NDLLVQ-EYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~--~-~~~~~~-~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      ++||+++++|+++++.|++++||+||+|+||+++|++....  . ...... .........|++|+.+|+|+|++++||+
T Consensus       166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~  245 (267)
T 1iy8_A          166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999875331  0 111111 1113445678999999999999999999


Q ss_pred             cCCCCCccccEEEeCCCccCC
Q 024551          245 LPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ++..+++||+.|.+|||++++
T Consensus       246 s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          246 SDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             SGGGTTCCSCEEEESTTTTTB
T ss_pred             CccccCCCCCEEEECCCcccC
Confidence            999999999999999998764

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=3.3e-51  Score=344.62  Aligned_cols=256  Identities=54%  Similarity=0.893  Sum_probs=228.4

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      |+..++++||++|||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++
T Consensus         1 m~~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (260)
T 2ae2_A            1 MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTV   80 (260)
T ss_dssp             -CCTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999999999888888877778999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      .+.+++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+
T Consensus        81 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (260)
T 2ae2_A           81 ANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYG  160 (260)
T ss_dssp             HHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHH
Confidence            99874579999999998877788889999999999999999999999999999988789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-HHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +||+++++|+++++.|++++||+||+|+||+++|++......... ...........|++|+.+|+|+|++++||+++.+
T Consensus       161 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~  240 (260)
T 2ae2_A          161 ATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAA  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999999987543221111 1111234556789999999999999999999989


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      +++||+.+.+|||+++.
T Consensus       241 ~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          241 SYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             cCCCCCEEEECCCcccc
Confidence            99999999999998753

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.5e-52  Score=353.32  Aligned_cols=248  Identities=23%  Similarity=0.300  Sum_probs=213.7

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC---ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR---DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      ++..++++||++|||||++|||+++|++|+++|++|++++|   +.+.++++.+++.+.+.++.++++|++|++++++++
T Consensus         3 ~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            3 LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             -CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHH
T ss_pred             CccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            45667899999999999999999999999999999999765   566788888888888889999999999999999999


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCch
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  166 (266)
                      +++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..+.++..
T Consensus        83 ~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~  159 (262)
T 3ksu_A           83 DFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAYTGFYS  159 (262)
T ss_dssp             HHHHHHH-CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHHHCCCC
T ss_pred             HHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccCCCCCc
Confidence            9999999 78999999999988888899999999999999999999999999999943  58999999999988888999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .|++||+|+++|+++++.|++++|||||+|+||+++|++.........   ........|.+|+.+|||+|++++||+++
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~r~~~pedvA~~v~~L~s~  236 (262)
T 3ksu_A          160 TYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES---TAFHKSQAMGNQLTKIEDIAPIIKFLTTD  236 (262)
T ss_dssp             C-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------CCCCSCCGGGTHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH---HHHHHhcCcccCCCCHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999988654322211   13344567899999999999999999999


Q ss_pred             CCCCccccEEEeCCCccC
Q 024551          247 AASYITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~  264 (266)
                       ++|+||+.|.+|||++.
T Consensus       237 -~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          237 -GWWINGQTIFANGGYTT  253 (262)
T ss_dssp             -TTTCCSCEEEESTTCCC
T ss_pred             -CCCccCCEEEECCCccC
Confidence             89999999999999975

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=8.8e-52  Score=349.51  Aligned_cols=247  Identities=28%  Similarity=0.361  Sum_probs=218.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +..+.++.+|++|+++++++++    
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----
Confidence            5689999999999999999999999999999999999999999999998765  4578899999999999887765    


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus        82 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  160 (267)
T 3t4x_A           82 KY-PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSAT  160 (267)
T ss_dssp             HC-CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHH
Confidence            35 78999999999988888899999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc---------c-chhHH-HHHHHHhcCCCCCCCCccchHHHH
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL---------N-DLLVQ-EYVKLIAKTPLARSAEPNEISPLV  240 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~---------~-~~~~~-~~~~~~~~~~~~~~~~~~eia~~~  240 (266)
                      |+|+++|+++++.|++++|||||+|+||+++|++.....         . ..... .........|++|+.+|||+|+++
T Consensus       161 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  240 (267)
T 3t4x_A          161 KTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLV  240 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHH
Confidence            999999999999999999999999999999998543211         0 11111 111222346789999999999999


Q ss_pred             HHHhcCCCCCccccEEEeCCCccCC
Q 024551          241 AFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       241 ~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +||+++.++|+||++|.+|||++.+
T Consensus       241 ~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          241 TFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHcCccccCccCCeEEECCCcccc
Confidence            9999999999999999999999764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.1e-51  Score=343.98  Aligned_cols=252  Identities=37%  Similarity=0.618  Sum_probs=224.0

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH-HhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l-~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      +++..++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++ ...+.++.++++|++|++++++++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            34556789999999999999999999999999999999999999988888887 44467889999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC-CCCCCCCchh
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA-GAISIPRLSA  167 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~-~~~~~~~~~~  167 (266)
                      +.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||.. +..+.++...
T Consensus        93 ~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~  171 (267)
T 1vl8_A           93 VKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISA  171 (267)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHH
T ss_pred             HHHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChh
Confidence            99998 789999999998877788889999999999999999999999999999888789999999998 8888889999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++||+++++|+++++.|++++||+||+|+||+++|++........  ..........|++|+.+|+|+|+.++||+++.
T Consensus       172 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  249 (267)
T 1vl8_A          172 YAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP--EKLDYMLKRIPLGRTGVPEDLKGVAVFLASEE  249 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCH--HHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccCh--HHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999865321111  11233445678999999999999999999999


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      .+++||+.|.+|||+++
T Consensus       250 ~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          250 AKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             ccCCcCCeEEECCCCCC
Confidence            99999999999999864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.2e-51  Score=348.89  Aligned_cols=249  Identities=26%  Similarity=0.384  Sum_probs=215.7

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC------------hhHHHHHHHHHHhcCCeeEEEeccCC
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD------------QNMINERIQEWESKGFKVTGSVCDLS   77 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~D~~   77 (266)
                      .++..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++++|++
T Consensus         5 ~~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   84 (278)
T 3sx2_A            5 RSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVR   84 (278)
T ss_dssp             ----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence            345667999999999999999999999999999999999987            77888888888877889999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecC
Q 024551           78 FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSV  156 (266)
Q Consensus        78 ~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~  156 (266)
                      |+++++++++++.+.+ +++|+||||||+.....    +.++|++.+++|+.++++++++++|+|.+++ .|+||++||.
T Consensus        85 ~~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  159 (278)
T 3sx2_A           85 DRESLSAALQAGLDEL-GRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSS  159 (278)
T ss_dssp             CHHHHHHHHHHHHHHH-CCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccH
Confidence            9999999999999999 78999999999875433    5899999999999999999999999998765 6899999999


Q ss_pred             CCCCCC----CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHH-------HHhcC
Q 024551          157 AGAISI----PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-------LIAKT  225 (266)
Q Consensus       157 ~~~~~~----~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-------~~~~~  225 (266)
                      .+..+.    ++...|++||+++++|+++++.|++++|||||+|+||+++|++...............       .....
T Consensus       160 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (278)
T 3sx2_A          160 AGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAM  239 (278)
T ss_dssp             GGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSS
T ss_pred             HhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhc
Confidence            988876    6778999999999999999999999999999999999999999765332221111111       11224


Q ss_pred             CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          226 PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       226 ~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      | +|+.+|+|+|++++||+++.++|+||+.|.+|||+++
T Consensus       240 p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          240 P-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             S-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             C-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            5 7889999999999999999999999999999999975

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.7e-51  Score=348.03  Aligned_cols=258  Identities=27%  Similarity=0.379  Sum_probs=222.8

Q ss_pred             cCCCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEec-CChhHHHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 024551            4 AAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESKGFKVTGSVCDLSFGDQR   82 (266)
Q Consensus         4 ~~~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i   82 (266)
                      ..+|....+...+++|+++||||++|||++++++|+++|++|++++ |+.+..++..+++...+.++.++++|++|++++
T Consensus        11 ~~~~~~~~p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   90 (269)
T 3gk3_A           11 TLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESC   90 (269)
T ss_dssp             -------------CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHH
T ss_pred             ccCcCcCCchhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHH
Confidence            4567777777778999999999999999999999999999999988 677777777888877778999999999999999


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI  162 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~  162 (266)
                      +++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.
T Consensus        91 ~~~~~~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  169 (269)
T 3gk3_A           91 ERCAEKVLADF-GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA  169 (269)
T ss_dssp             HHHHHHHHHHH-SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC
Confidence            99999999999 78999999999988888889999999999999999999999999999998888999999999999999


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHH
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+++|++..........   .......|.+|+.+|+|+|++++|
T Consensus       170 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~~~~p~dvA~~v~~  246 (269)
T 3gk3_A          170 FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLE---AKILPQIPVGRLGRPDEVAALIAF  246 (269)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC----------CCSGGGCTTSSCBCHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHH---HHhhhcCCcCCccCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999987754322110   133456789999999999999999


Q ss_pred             HhcCCCCCccccEEEeCCCccCC
Q 024551          243 LCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |+++...++||+.|.+|||++++
T Consensus       247 L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          247 LCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             HTSTTCTTCCSCEEEESTTSCCC
T ss_pred             HhCCCcCCeeCcEEEECCCEeCc
Confidence            99999999999999999999864

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=5.8e-51  Score=348.90  Aligned_cols=253  Identities=20%  Similarity=0.236  Sum_probs=213.8

Q ss_pred             CccCCc-cccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHH
Q 024551            7 PVFGDK-KWSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQRE   83 (266)
Q Consensus         7 ~~~~~~-~~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~   83 (266)
                      |..|+. +.+++||++|||||+  +|||+++|++|+++|++|++++|+++..+.. +++.+..+++.++++|++|+++++
T Consensus        19 p~~~~~~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~   97 (293)
T 3grk_A           19 PGSMTAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGHCDVADAASID   97 (293)
T ss_dssp             --------CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHH-HHHHHHHTCEEEEECCTTCHHHHH
T ss_pred             CCCCCcccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHhcCCceEEECCCCCHHHHH
Confidence            333433 346899999999999  5699999999999999999999996544433 333333347889999999999999


Q ss_pred             HHHHHHHhhcCCcccEEEecccccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Q 024551           84 KLIETVSSVFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA  159 (266)
Q Consensus        84 ~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~  159 (266)
                      ++++++.+.+ +++|+||||||+..    ..++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+.
T Consensus        98 ~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~  174 (293)
T 3grk_A           98 AVFETLEKKW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAE  174 (293)
T ss_dssp             HHHHHHHHHT-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGT
T ss_pred             HHHHHHHHhc-CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhc
Confidence            9999999998 78999999999875    467888999999999999999999999999999976  5899999999999


Q ss_pred             CCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHH
Q 024551          160 ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL  239 (266)
Q Consensus       160 ~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~  239 (266)
                      .+.+++..|++||+|+++|+++++.|++++|||||+|+||+++|++........  ..........|++|+.+|+|+|++
T Consensus       175 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~pedvA~~  252 (293)
T 3grk_A          175 KVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFR--YILKWNEYNAPLRRTVTIDEVGDV  252 (293)
T ss_dssp             SBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHH--HHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchH--HHHHHHHhcCCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999999999876543222  222455667899999999999999


Q ss_pred             HHHHhcCCCCCccccEEEeCCCccCC
Q 024551          240 VAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       240 ~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ++||+++.++++||++|.+|||+++.
T Consensus       253 v~~L~s~~~~~itG~~i~vdGG~~~~  278 (293)
T 3grk_A          253 GLYFLSDLSRSVTGEVHHADSGYHVI  278 (293)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHcCccccCCcceEEEECCCcccC
Confidence            99999999999999999999999874

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.1e-51  Score=354.27  Aligned_cols=250  Identities=29%  Similarity=0.444  Sum_probs=221.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC------------hhHHHHHHHHHHhcCCeeEEEeccCCCHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD------------QNMINERIQEWESKGFKVTGSVCDLSFGDQ   81 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~   81 (266)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.+.++.++++|++|+++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            45899999999999999999999999999999999876            778888888888888899999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCC
Q 024551           82 REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAI  160 (266)
Q Consensus        82 i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~  160 (266)
                      ++++++++.+.+ +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..
T Consensus       122 v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~  200 (317)
T 3oec_A          122 LQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR  200 (317)
T ss_dssp             HHHHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence            999999999999 7899999999998888899999999999999999999999999999998765 68999999999999


Q ss_pred             CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC---------ccchhHHHHHH---HHhcCCCC
Q 024551          161 SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD---------LNDLLVQEYVK---LIAKTPLA  228 (266)
Q Consensus       161 ~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~---------~~~~~~~~~~~---~~~~~~~~  228 (266)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++....         ...........   .....| +
T Consensus       201 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  279 (317)
T 3oec_A          201 GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-I  279 (317)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-S
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-C
Confidence            9999999999999999999999999999999999999999999874321         00111111111   122234 7


Q ss_pred             CCCCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          229 RSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |+.+|+|+|++++||+++.++|+||+.|.||||+++.
T Consensus       280 ~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          280 PWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            8899999999999999999999999999999999863

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2.8e-51  Score=347.16  Aligned_cols=255  Identities=29%  Similarity=0.407  Sum_probs=222.6

Q ss_pred             CCCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHH
Q 024551            5 AEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQRE   83 (266)
Q Consensus         5 ~~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~   83 (266)
                      .+..+.+..++++||++|||||++|||+++|++|+++|++|++++| +.+..+++.+++.+.+.++.++++|++|+++++
T Consensus        16 ~~~~~~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   95 (271)
T 4iin_A           16 ENLYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFI   95 (271)
T ss_dssp             --------CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             ceehhhhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            3445556678899999999999999999999999999999999999 566677788888888889999999999999999


Q ss_pred             HHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC
Q 024551           84 KLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP  163 (266)
Q Consensus        84 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~  163 (266)
                      ++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.+
T Consensus        96 ~~~~~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  174 (271)
T 4iin_A           96 EAIQTIVQSD-GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNM  174 (271)
T ss_dssp             HHHHHHHHHH-SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHhc-CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCC
Confidence            9999999998 789999999999888888899999999999999999999999999999988889999999999999999


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHH
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      +...|++||+++++|+++++.|++++||+||+|+||+++|++.......    .........|++|+.+|+|+|++++||
T Consensus       175 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~p~dvA~~i~~l  250 (271)
T 4iin_A          175 GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE----LKADYVKNIPLNRLGSAKEVAEAVAFL  250 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------CGGGCTTCSCBCHHHHHHHHHHH
T ss_pred             CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH----HHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987654221    113345567999999999999999999


Q ss_pred             hcCCCCCccccEEEeCCCccC
Q 024551          244 CLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +++...++||+.|.+|||+++
T Consensus       251 ~s~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          251 LSDHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTSCC
T ss_pred             hCCCcCCCcCCEEEeCCCeeC
Confidence            999999999999999999975

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-51  Score=344.48  Aligned_cols=253  Identities=26%  Similarity=0.359  Sum_probs=224.5

Q ss_pred             ccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEec-CChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 024551            8 VFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus         8 ~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      ....+..+.++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++.+.+.++.++++|++|++++++++
T Consensus         3 ~~~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   82 (256)
T 3ezl_A            3 HHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAF   82 (256)
T ss_dssp             ----------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHH
Confidence            344566678999999999999999999999999999999877 7777888888888888889999999999999999999


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCch
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  166 (266)
                      +++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.++..
T Consensus        83 ~~~~~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  161 (256)
T 3ezl_A           83 DKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQT  161 (256)
T ss_dssp             HHHHHHT-CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCH
T ss_pred             HHHHHhc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCc
Confidence            9999998 789999999999888888999999999999999999999999999999988889999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .|++||+|+++|+++++.|++++||+|++|+||+++|++.....+    ..........|++|+.+|+|+|++++||+++
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  237 (256)
T 3ezl_A          162 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP----DVLEKIVATIPVRRLGSPDEIGSIVAWLASE  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH----HHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999998655322    2224556678999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccCC
Q 024551          247 AASYITGQVISIDGGYTAG  265 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~~  265 (266)
                      ..+++||+.|.+|||++++
T Consensus       238 ~~~~~tG~~i~vdgG~~~~  256 (256)
T 3ezl_A          238 ESGFSTGADFSLNGGLHMG  256 (256)
T ss_dssp             GGTTCCSCEEEESTTSCC-
T ss_pred             cccCCcCcEEEECCCEeCc
Confidence            9999999999999999874

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.2e-51  Score=345.49  Aligned_cols=250  Identities=32%  Similarity=0.465  Sum_probs=224.1

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      .+++.+++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+ ++.++++|++|++++++++++
T Consensus        20 ~~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~   98 (276)
T 2b4q_A           20 HMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQA   98 (276)
T ss_dssp             -CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHH
T ss_pred             ccccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHH
Confidence            4455677999999999999999999999999999999999999999988888886655 788999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC----CeEEEEecCCCCCCCCC
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN----ASIVFMSSVAGAISIPR  164 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~----g~iv~vss~~~~~~~~~  164 (266)
                      +.+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.    |+||++||..+..+.+.
T Consensus        99 ~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~  177 (276)
T 2b4q_A           99 LGELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE  177 (276)
T ss_dssp             HHHHC-SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC
T ss_pred             HHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC
Confidence            99998 78999999999887778888999999999999999999999999999987765    89999999999988888


Q ss_pred             ch-hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh--cCCCCCCCCccchHHHHH
Q 024551          165 LS-AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA--KTPLARSAEPNEISPLVA  241 (266)
Q Consensus       165 ~~-~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~eia~~~~  241 (266)
                      .. .|++||+++++|+++++.|++++||+||+|+||+++|++....... .   ......  ..|++|+.+|+|+|++++
T Consensus       178 ~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~---~~~~~~~~~~p~~r~~~p~dvA~~v~  253 (276)
T 2b4q_A          178 QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND-P---QALEADSASIPMGRWGRPEEMAALAI  253 (276)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC-H---HHHHHHHHTSTTSSCCCHHHHHHHHH
T ss_pred             CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh-H---HHHHHhhcCCCCCCcCCHHHHHHHHH
Confidence            88 9999999999999999999999999999999999999986432111 1   122223  678999999999999999


Q ss_pred             HHhcCCCCCccccEEEeCCCccC
Q 024551          242 FLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ||+++..+++||+.|.+|||+++
T Consensus       254 ~l~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          254 SLAGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCCCCEEEeCCCccC
Confidence            99999899999999999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1e-50  Score=338.91  Aligned_cols=244  Identities=30%  Similarity=0.440  Sum_probs=223.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++|+++||||++|||++++++|+++|++|++++| +++.++++.+++.+.+.++.++++|++|+++++++++++.+.+ 
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF-   80 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            67999999999999999999999999999999999 8888888888888777789999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++...|++||++
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  160 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAG  160 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHH
Confidence            78999999999887778888999999999999999999999999999988778999999999988888999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++|+++++.|++++||+||+|+||+++|++..... ....   .......|++|+.+|+|+|+.++||+++..+|+||+
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~---~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~  236 (246)
T 2uvd_A          161 VIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD-ENIK---AEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQ  236 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC-TTHH---HHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC-HHHH---HHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCC
Confidence            999999999999999999999999999999866432 2111   233446788999999999999999999999999999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      .|.+|||+++
T Consensus       237 ~~~vdgG~~~  246 (246)
T 2uvd_A          237 TLNVDGGMVM  246 (246)
T ss_dssp             EEEESTTSCC
T ss_pred             EEEECcCccC
Confidence            9999999864

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2.6e-51  Score=345.19  Aligned_cols=246  Identities=29%  Similarity=0.335  Sum_probs=210.1

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +++++||++|||||++|||++++++|+++|++|+++ .|+.+..++..+++.+.+.++.++++|++|+++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999988 7778888888888888888999999999999999999999999


Q ss_pred             hcCCcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhhh
Q 024551           92 VFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYA  169 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y~  169 (266)
                      .+ +++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+. .+.++...|+
T Consensus        83 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~  159 (259)
T 3edm_A           83 KF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYA  159 (259)
T ss_dssp             HH-CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHH
T ss_pred             Hh-CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHH
Confidence            99 7899999999987 5678889999999999999999999999999999976  5899999999988 6888999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+|+++|+++++.|++++ ||||+|+||+++|++........   .........|++|+.+|+|+|++++||+++.++
T Consensus       160 asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~  235 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPE---VRERVAGATSLKREGSSEDVAGLVAFLASDDAA  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-------------------------CCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChH---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            99999999999999999987 99999999999999876543222   123445567999999999999999999999999


Q ss_pred             CccccEEEeCCCccCC
Q 024551          250 YITGQVISIDGGYTAG  265 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~~  265 (266)
                      |+||+.|.+|||++..
T Consensus       236 ~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          236 YVTGACYDINGGVLFS  251 (259)
T ss_dssp             TCCSCEEEESBCSSBC
T ss_pred             CccCCEEEECCCcCCC
Confidence            9999999999999864

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=3.1e-51  Score=350.79  Aligned_cols=248  Identities=30%  Similarity=0.354  Sum_probs=220.2

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC--hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD--QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .++++||++|||||++|||+++|++|+++|++|++++|+  .+..+++.+++.+.+.++.++++|++|+++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999987  345677777777778899999999999999999999999


Q ss_pred             hhcCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           91 SVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      +.+ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..+.++...|+
T Consensus       124 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~  200 (294)
T 3r3s_A          124 EAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_dssp             HHH-TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHc-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHH
Confidence            999 78999999999865 567888999999999999999999999999999965  48999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+|+++|+++++.|++++|||||+|+||+++|++.........  .........|++|+.+|+|+|++++||+++.++
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~  278 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQD--KIPQFGQQTPMKRAGQPAELAPVYVYLASQESS  278 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGG--GSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHH--HHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999999999999999999999999999987322111110  112334567999999999999999999999999


Q ss_pred             CccccEEEeCCCccCC
Q 024551          250 YITGQVISIDGGYTAG  265 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~~  265 (266)
                      |+||++|.||||++++
T Consensus       279 ~itG~~i~vdGG~~l~  294 (294)
T 3r3s_A          279 YVTAEVHGVCGGEHLG  294 (294)
T ss_dssp             TCCSCEEEESTTCCCC
T ss_pred             CCCCCEEEECCCccCc
Confidence            9999999999999875

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.4e-50  Score=343.15  Aligned_cols=246  Identities=26%  Similarity=0.351  Sum_probs=213.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.++++|++|+++++++++++.+.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4688999999999999999999999999999999999999887776654   5689999999999999999999999999


Q ss_pred             CCcccEEEecccccccc-C----CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           94 DGKLNILVNNAALVVMK-R----ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~-~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                       +++|+||||||+.... .    ..+.+.++|++.+++|+.++++++++++|+|.+++ |+||++||..+..+.++...|
T Consensus        78 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y  155 (281)
T 3zv4_A           78 -GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLY  155 (281)
T ss_dssp             -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHH
T ss_pred             -CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchh
Confidence             7899999999986432 2    23455678999999999999999999999998764 899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhH------HHHHHHHhcCCCCCCCCccchHHHHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV------QEYVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      ++||+|+++|+++++.|++++ ||||+|+||+++|++..........      ..........|++|+.+|+|+|++++|
T Consensus       156 ~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  234 (281)
T 3zv4_A          156 TATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVF  234 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999987 9999999999999987543211100      012445667899999999999999999


Q ss_pred             Hhc-CCCCCccccEEEeCCCccCC
Q 024551          243 LCL-PAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       243 l~s-~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |++ +.+.|+||+.|.+|||+++.
T Consensus       235 L~s~~~~~~itG~~i~vdGG~~~~  258 (281)
T 3zv4_A          235 FATRGDSLPATGALLNYDGGMGVR  258 (281)
T ss_dssp             HHSTTTSTTCSSCEEEESSSGGGC
T ss_pred             hhcccccccccCcEEEECCCCccc
Confidence            999 88899999999999999875

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=9e-51  Score=342.38  Aligned_cols=245  Identities=29%  Similarity=0.433  Sum_probs=221.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|+++++++++++.+.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   82 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-   82 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            4789999999999999999999999999999999999999999988888777789999999999999999999999998 


Q ss_pred             CcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.++...|++||+
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  162 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  162 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHH
Confidence            7899999999987 667788899999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC------------cc-chhHHHHHHHHhcCCCCCCCCccchHHHH
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD------------LN-DLLVQEYVKLIAKTPLARSAEPNEISPLV  240 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~~~eia~~~  240 (266)
                      ++++|+++++.|++++|||||+|+||+++|++....            .. ... ..........|++|+.+|+|+|+++
T Consensus       163 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~r~~~p~dvA~~v  241 (262)
T 1zem_A          163 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPK-VVAQQMIGSVPMRRYGDINEIPGVV  241 (262)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHH-HHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHH-HHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999999999999999999975431            11 111 0112344567999999999999999


Q ss_pred             HHHhcCCCCCccccEEEeCCC
Q 024551          241 AFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       241 ~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      +||+++.++|+||+.|.+|||
T Consensus       242 ~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          242 AFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHcCchhcCcCCcEEecCCC
Confidence            999999999999999999998

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2.4e-50  Score=344.74  Aligned_cols=246  Identities=26%  Similarity=0.309  Sum_probs=220.5

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEec-CChhHHHHHHHHHH-hcCCeeEEEeccCCCHH----------
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWE-SKGFKVTGSVCDLSFGD----------   80 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~-r~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~----------   80 (266)
                      ++++++|++|||||++|||++++++|+++|++|++++ |+++.++++.+++. ..+.++.++++|++|++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            4568999999999999999999999999999999999 99999999988887 55678999999999999          


Q ss_pred             -------HHHHHHHHHHhhcCCcccEEEeccccccccCCCCCC--------------HHHHHHHhccchhhHHHHHHHHH
Q 024551           81 -------QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYT--------------LEEYSSVMSTNVESSYHLCQLAH  139 (266)
Q Consensus        81 -------~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~  139 (266)
                             +++++++++.+.+ +++|+||||||+....++.+.+              .++|++.+++|+.++++++++++
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                   9999999999998 7899999999988777788888              99999999999999999999999


Q ss_pred             HHHHhcC------CCeEEEEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch
Q 024551          140 PLLKASG------NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL  213 (266)
Q Consensus       140 ~~m~~~~------~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~  213 (266)
                      |.|++++      .|+||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++ .  ... 
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~~-  238 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MPP-  238 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SCH-
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CCH-
Confidence            9998876      69999999999999999999999999999999999999999999999999999999998 3  221 


Q ss_pred             hHHHHHHHHhcCCCC-CCCCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          214 LVQEYVKLIAKTPLA-RSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       214 ~~~~~~~~~~~~~~~-~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                        ..........|++ |+.+|+|+|++++||+++..+|+||++|.+|||+++.
T Consensus       239 --~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          239 --AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             --HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             --HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence              1223445567888 9999999999999999999999999999999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=5.9e-51  Score=341.64  Aligned_cols=239  Identities=26%  Similarity=0.358  Sum_probs=214.8

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccC--CCHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDL--SFGDQREKLIETV   89 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~--~~~~~i~~~~~~~   89 (266)
                      ...++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+ .++.++++|+  +|+++++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999999999999887654 3788999999  9999999999999


Q ss_pred             HhhcCCcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           90 SSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      .+.+ +++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|
T Consensus        87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (252)
T 3f1l_A           87 AVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAY  165 (252)
T ss_dssp             HHHC-SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchh
Confidence            9998 7899999999985 4568889999999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+|+++|+++++.|++++ ||||+|+||+++|++.....            ...+..++.+|+|+|+.++||+++.+
T Consensus       166 ~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~------------~~~~~~~~~~p~dva~~~~~L~s~~~  232 (252)
T 3f1l_A          166 AASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAF------------PTEDPQKLKTPADIMPLYLWLMGDDS  232 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHC------------TTCCGGGSBCTGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhC------------CccchhccCCHHHHHHHHHHHcCccc
Confidence            999999999999999999987 99999999999997633211            12234567899999999999999999


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      +|+||+.|.+|||+..+
T Consensus       233 ~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          233 RRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             TTCCSCEEESSCC----
T ss_pred             cCCCCCEEEeCCCcCCC
Confidence            99999999999998653

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.7e-50  Score=340.29  Aligned_cols=248  Identities=31%  Similarity=0.436  Sum_probs=216.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-HHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-INERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++||+++||||++|||++++++|+++|++|++++|+++. ++++.+++.+. +.++.++++|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999999999999888 88888888665 6688999999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||+
T Consensus        82 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  160 (260)
T 1x1t_A           82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence             7899999999988777888899999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-------HHHHHHH-HhcCCCCCCCCccchHHHHHHHhc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-------VQEYVKL-IAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ++++|+++++.|++++||+||+|+||+++|++.........       ....... ....|++|+.+|+|+|++++||++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s  240 (260)
T 1x1t_A          161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999998654321100       0111112 344688999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccC
Q 024551          246 PAASYITGQVISIDGGYTA  264 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~  264 (266)
                      +..+++||+.+.+|||+++
T Consensus       241 ~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          241 DAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             hhhcCCCCCEEEECCCccC
Confidence            9899999999999999875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=3.7e-50  Score=338.21  Aligned_cols=251  Identities=32%  Similarity=0.494  Sum_probs=223.7

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ....+++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+.++.++.+|++|+++++++++++.+
T Consensus         8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A            8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999999888888887777899999999999999999999999


Q ss_pred             hcCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           92 VFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      .+ +++|+||||||... .+++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        88 ~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  166 (260)
T 2zat_A           88 LH-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNV  166 (260)
T ss_dssp             HH-SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             Hc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHH
Confidence            98 78999999999864 46778889999999999999999999999999998887899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||+++++|+++++.|++++|||||+|+||+++|++..........  ........|++|+.+|+|+|++++||+++.++|
T Consensus       167 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~  244 (260)
T 2zat_A          167 SKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKAR--KEYMKESLRIRRLGNPEDCAGIVSFLCSEDASY  244 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHH--HHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHH--HHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence            999999999999999999999999999999999986432211111  122334468899999999999999999999999


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      ++|+.+.+|||+...
T Consensus       245 ~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          245 ITGETVVVGGGTASR  259 (260)
T ss_dssp             CCSCEEEESTTCCCC
T ss_pred             ccCCEEEECCCcccc
Confidence            999999999998753

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.6e-51  Score=341.87  Aligned_cols=242  Identities=26%  Similarity=0.323  Sum_probs=201.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++++|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF   79 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999999888777766   4578899999999999999999999999


Q ss_pred             CCcccEEEeccccccccCC----CCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc------CCCeEEEEecCCCCCCCC
Q 024551           94 DGKLNILVNNAALVVMKRA----TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS------GNASIVFMSSVAGAISIP  163 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~iv~vss~~~~~~~~  163 (266)
                       +++|+||||||......+    .+.+.++|++.+++|+.++++++++++|+|+++      +.|+||++||..+..+.+
T Consensus        80 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tpc_A           80 -GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI  158 (257)
T ss_dssp             -SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             -CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence             789999999998765443    367899999999999999999999999999874      578999999999999999


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-CCCCCccchHHHHHH
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLVAF  242 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~eia~~~~~  242 (266)
                      +...|++||+++++|+++++.|++++||+||+|+||+++|++.......    .........|+ +|+.+|+|+|++++|
T Consensus       159 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----~~~~~~~~~p~~~r~~~~~dva~~v~~  234 (257)
T 3tpc_A          159 GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD----VQDALAASVPFPPRLGRAEEYAALVKH  234 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------CCSSSSCSCBCHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH----HHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987654221    12334556787 899999999999999


Q ss_pred             HhcCCCCCccccEEEeCCCccCC
Q 024551          243 LCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |+++  +++||+.|.+|||+++.
T Consensus       235 l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          235 ICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHC--TTCCSCEEEESTTCCC-
T ss_pred             Hccc--CCcCCcEEEECCCccCC
Confidence            9975  79999999999999875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.4e-50  Score=340.40  Aligned_cols=247  Identities=30%  Similarity=0.362  Sum_probs=220.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH--HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM--INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.  ++++.+++.+.+.++.++++|++|+++++++++++.+.+ 
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   79 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-   79 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            37999999999999999999999999999999999888  888888887767789999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC-CeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++. |+||++||..+..+.++...|++||+
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKF  159 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHH
Confidence            78999999999887778888999999999999999999999999999988776 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-------chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-------DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      ++++|+++++.|++++||+||+|+||+++|++......       ..............|++|+.+|+|+|++++||+++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~  239 (258)
T 3a28_C          160 AVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASE  239 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999987543110       00011112344557899999999999999999999


Q ss_pred             CCCCccccEEEeCCCccC
Q 024551          247 AASYITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~  264 (266)
                      .++++||+.|.+|||+++
T Consensus       240 ~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          240 NSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             GGTTCCSCEEEESSSSCC
T ss_pred             ccCCCCCCEEEECCCEec
Confidence            999999999999999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.5e-50  Score=346.08  Aligned_cols=247  Identities=30%  Similarity=0.424  Sum_probs=221.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+. .+...+.+.+.+.++.++++|++|+++++++++++.+.
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998764 45566666677789999999999999999999999999


Q ss_pred             cCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..+.++...|++|
T Consensus       123 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  199 (291)
T 3ijr_A          123 L-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSAT  199 (291)
T ss_dssp             H-SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             c-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHH
Confidence            9 78999999999874 457888899999999999999999999999999965  4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+++++|+++++.|++++||+||+|+||+++|++........   .........|++|+.+|+|+|++++||+++.++++
T Consensus       200 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~i  276 (291)
T 3ijr_A          200 KGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEK---KVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYV  276 (291)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHH---HHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHH---HHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCC
Confidence            999999999999999999999999999999999854433221   22344566899999999999999999999999999


Q ss_pred             cccEEEeCCCccCCC
Q 024551          252 TGQVISIDGGYTAGN  266 (266)
Q Consensus       252 ~G~~l~vdgG~~~~~  266 (266)
                      ||++|.+|||+++.+
T Consensus       277 tG~~i~vdGG~~~~g  291 (291)
T 3ijr_A          277 TGQMIHVNGGVIVNG  291 (291)
T ss_dssp             CSCEEEESSSCCCCC
T ss_pred             cCCEEEECCCcccCC
Confidence            999999999998754

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=3.7e-50  Score=336.24  Aligned_cols=245  Identities=29%  Similarity=0.407  Sum_probs=209.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|++ +.+++   ++.+.+.++.++++|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999999998 66654   444456789999999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        81 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  159 (249)
T 2ew8_A           81 -GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA  159 (249)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHH
Confidence             7899999999988777888899999999999999999999999999998887899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      ++++|+++++.|++++||+||+|+||+++|++........... ...... .|++|+.+|+|+|++++||+++.++++||
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~-~~~~~~~~p~dva~~~~~l~s~~~~~~tG  237 (249)
T 2ew8_A          160 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFD-VLPNML-QAIPRLQVPLDLTGAAAFLASDDASFITG  237 (249)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTT-SSSCSCCCTHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhh-HHHHhh-CccCCCCCHHHHHHHHHHHcCcccCCCCC
Confidence            9999999999999999999999999999999865111101000 011111 68889999999999999999998999999


Q ss_pred             cEEEeCCCccCC
Q 024551          254 QVISIDGGYTAG  265 (266)
Q Consensus       254 ~~l~vdgG~~~~  265 (266)
                      +.|.+|||++.+
T Consensus       238 ~~~~vdGG~~~~  249 (249)
T 2ew8_A          238 QTLAVDGGMVRH  249 (249)
T ss_dssp             CEEEESSSCCCC
T ss_pred             cEEEECCCccCc
Confidence            999999998763

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=2.7e-50  Score=342.20  Aligned_cols=259  Identities=27%  Similarity=0.416  Sum_probs=228.5

Q ss_pred             CCCccCCccc-cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHH
Q 024551            5 AEPVFGDKKW-SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQRE   83 (266)
Q Consensus         5 ~~~~~~~~~~-~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~   83 (266)
                      ++|....+.| ++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++
T Consensus         8 ~~~~~~~~~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   87 (277)
T 2rhc_B            8 SGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIE   87 (277)
T ss_dssp             --CCCTTTTTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCCccccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            4555555666 689999999999999999999999999999999999999999888888877778999999999999999


Q ss_pred             HHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHH--HHhcCCCeEEEEecCCCCCC
Q 024551           84 KLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPL--LKASGNASIVFMSSVAGAIS  161 (266)
Q Consensus        84 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--m~~~~~g~iv~vss~~~~~~  161 (266)
                      ++++++.+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.  |++++.|+||++||..+..+
T Consensus        88 ~~~~~~~~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~  166 (277)
T 2rhc_B           88 ALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG  166 (277)
T ss_dssp             HHHHHHHHHT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHh-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC
Confidence            9999999998 78999999999887778888999999999999999999999999999  98877799999999999999


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--h-----hHHHHHHHHhcCCCCCCCCcc
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--L-----LVQEYVKLIAKTPLARSAEPN  234 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~  234 (266)
                      .++...|++||+++++|+++++.|++++||+||+|+||+++|++.......  .     ............|++|+.+|+
T Consensus       167 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  246 (277)
T 2rhc_B          167 VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS  246 (277)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHH
Confidence            999999999999999999999999999999999999999999875432100  0     011112334557899999999


Q ss_pred             chHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          235 EISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       235 eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      |+|++++||+++..+++||+.|.+|||++.
T Consensus       247 dvA~~v~~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          247 EVAEMVAYLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHhCchhcCCCCcEEEECCCccc
Confidence            999999999999899999999999999864

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-49  Score=332.53  Aligned_cols=240  Identities=29%  Similarity=0.403  Sum_probs=217.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++   +  +.++++|++|+++++++++++.+.+ 
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~-   75 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHL-   75 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            578999999999999999999999999999999999998877666544   2  7788999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||.. ..+.++...|++||++
T Consensus        76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a  154 (245)
T 1uls_A           76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAG  154 (245)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHH
Confidence            789999999998877788889999999999999999999999999999888789999999998 8888899999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++|+++++.|++++||+||+|+||+++|++.... ....   ........|++|+.+|+|+|+.++||+++..+++||+
T Consensus       155 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~---~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~  230 (245)
T 1uls_A          155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-PEKV---REKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQ  230 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-CHHH---HHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-CHHH---HHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            99999999999999999999999999999987643 2211   1334456788999999999999999999989999999


Q ss_pred             EEEeCCCccCC
Q 024551          255 VISIDGGYTAG  265 (266)
Q Consensus       255 ~l~vdgG~~~~  265 (266)
                      .+.+|||+++.
T Consensus       231 ~~~vdgG~~~~  241 (245)
T 1uls_A          231 VLFVDGGRTIG  241 (245)
T ss_dssp             EEEESTTTTTT
T ss_pred             EEEECCCcccC
Confidence            99999998764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.3e-50  Score=337.04  Aligned_cols=247  Identities=26%  Similarity=0.363  Sum_probs=188.2

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             hcCCcccEEEecccc---ccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           92 VFDGKLNILVNNAAL---VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        92 ~~~~~id~lv~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      .+ +++|+||||||+   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..++   ++...|
T Consensus        83 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y  158 (253)
T 3qiv_A           83 EF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYY  158 (253)
T ss_dssp             HH-SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred             Hc-CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchh
Confidence            98 789999999998   34566778899999999999999999999999999998888999999998876   456789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+++++|+++++.|++++||+|++|+||+++|++.........   ........|++|+.+|+|+|++++||+++..
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  235 (253)
T 3qiv_A          159 GLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEM---VDDIVKGLPLSRMGTPDDLVGMCLFLLSDEA  235 (253)
T ss_dssp             -CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------CCHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHH---HHHHhccCCCCCCCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999998765433221   2344556788999999999999999999999


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      .++||+.+.+|||+++.
T Consensus       236 ~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          236 SWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             TTCCSCEEEC-------
T ss_pred             cCCCCCEEEECCCeecC
Confidence            99999999999999864

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.1e-50  Score=343.11  Aligned_cols=244  Identities=28%  Similarity=0.438  Sum_probs=214.6

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ..++..+++||++|||||++|||+++|++|+++|++|++++|+.+..          ...+..+++|++|++++++++++
T Consensus         5 ~~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~   74 (269)
T 3vtz_A            5 HHHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEK   74 (269)
T ss_dssp             -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHH
T ss_pred             ccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHH
Confidence            34566778999999999999999999999999999999999987643          12567889999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      +.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|
T Consensus        75 ~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (269)
T 3vtz_A           75 TTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAY  153 (269)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHH
T ss_pred             HHHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhH
Confidence            99999 78999999999988888889999999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-------chhHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-------DLLVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      ++||+|+++|+++++.|+++ ||+||+|+||+++|++......       ..............|++|+.+|+|+|++++
T Consensus       154 ~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  232 (269)
T 3vtz_A          154 VTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVA  232 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999998 8999999999999987543211       111223345566789999999999999999


Q ss_pred             HHhcCCCCCccccEEEeCCCccC
Q 024551          242 FLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ||+++.++++||++|.+|||++.
T Consensus       233 ~L~s~~~~~itG~~i~vdGG~~~  255 (269)
T 3vtz_A          233 FLASDRSSFITGACLTVDGGLLS  255 (269)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCCccCCCcCcEEEECCCccc
Confidence            99999999999999999999875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=6.3e-51  Score=344.07  Aligned_cols=246  Identities=32%  Similarity=0.454  Sum_probs=214.0

Q ss_pred             ccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 024551            8 VFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus         8 ~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   87 (266)
                      ....++++++||++|||||++|||+++|++|+++|++|++++|+.+.++           ....+++|++|.++++++++
T Consensus        18 ~~~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~   86 (266)
T 3uxy_A           18 LYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPG   86 (266)
T ss_dssp             --------CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHH
T ss_pred             cchhhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHH
Confidence            3445567899999999999999999999999999999999999876432           22455899999999999999


Q ss_pred             HHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh
Q 024551           88 TVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      ++.+.+ +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...
T Consensus        87 ~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  165 (266)
T 3uxy_A           87 AVAAGL-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHAL  165 (266)
T ss_dssp             HHHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHH
T ss_pred             HHHHhc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChH
Confidence            999999 7899999999998888889999999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc---hhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND---LLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.......   .............|++|+.+|||+|++++||+
T Consensus       166 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~  245 (266)
T 3uxy_A          166 YCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA  245 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999875432111   11122245566789999999999999999999


Q ss_pred             cCCCCCccccEEEeCCCccCC
Q 024551          245 LPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ++.++++||+.|.+|||++++
T Consensus       246 s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          246 SDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             SGGGTTCCSCEEEESTTCCCC
T ss_pred             CchhcCCcCCEEEECcCEeCC
Confidence            999999999999999999864

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=6.3e-50  Score=337.32  Aligned_cols=251  Identities=27%  Similarity=0.379  Sum_probs=223.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++.+. +.++.++++|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999988888888765 678999999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++...|++||
T Consensus        83 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  161 (263)
T 3ai3_A           83 F-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTK  161 (263)
T ss_dssp             H-SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHH
Confidence            8 789999999998877788899999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-------hhHHHHHHHHhc-CCCCCCCCccchHHHHHHHh
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-------LLVQEYVKLIAK-TPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~eia~~~~~l~  244 (266)
                      +++++|+++++.|++++||+||+|+||+++|++.......       ............ .|++|+.+|+|+|++++||+
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  241 (263)
T 3ai3_A          162 AALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC  241 (263)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999874321110       011111223334 78999999999999999999


Q ss_pred             cCCCCCccccEEEeCCCccCC
Q 024551          245 LPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ++..++++|+.+.+|||+++.
T Consensus       242 s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          242 SERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             STTCTTCCSCEEEESTTCCCC
T ss_pred             CccccCCCCcEEEECCCcccc
Confidence            998999999999999998764

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.2e-49  Score=340.05  Aligned_cols=253  Identities=26%  Similarity=0.295  Sum_probs=215.3

Q ss_pred             CCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHH-hcCCeeEEEeccCCC----H
Q 024551            6 EPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWE-SKGFKVTGSVCDLSF----G   79 (266)
Q Consensus         6 ~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~-~~~~~~~~~~~D~~~----~   79 (266)
                      +|.+.+..++++||++|||||++|||++++++|+++|++|++++|+. +.++++.+++. +.+.++.++++|++|    +
T Consensus        11 ~~~~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~   90 (288)
T 2x9g_A           11 SSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLP   90 (288)
T ss_dssp             -----------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHH
T ss_pred             ccccCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCH
Confidence            45666777889999999999999999999999999999999999998 88888888886 556789999999999    9


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccccccccCC-----CC-----CCHHHHHHHhccchhhHHHHHHHHHHHHHhcC---
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAALVVMKRA-----TE-----YTLEEYSSVMSTNVESSYHLCQLAHPLLKASG---  146 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---  146 (266)
                      ++++++++++.+.+ +++|+||||||+....++     .+     .+.++|++.+++|+.+++++++.++|.|++++   
T Consensus        91 ~~v~~~~~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~  169 (288)
T 2x9g_A           91 ASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNC  169 (288)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC-------
T ss_pred             HHHHHHHHHHHHhc-CCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCC
Confidence            99999999999998 789999999998766666     56     78899999999999999999999999998766   


Q ss_pred             ---CCeEEEEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh
Q 024551          147 ---NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA  223 (266)
Q Consensus       147 ---~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~  223 (266)
                         .|+||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++ . . ...   .......
T Consensus       170 ~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~~~---~~~~~~~  243 (288)
T 2x9g_A          170 TSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-GEE---EKDKWRR  243 (288)
T ss_dssp             -CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-CHH---HHHHHHH
T ss_pred             CCCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-ChH---HHHHHHh
Confidence               68999999999999999999999999999999999999999999999999999999998 3 2 111   1233445


Q ss_pred             cCCCCCC-CCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          224 KTPLARS-AEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       224 ~~~~~~~-~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ..|++|+ .+|+|+|++++||+++..+++||+.|.+|||+++.
T Consensus       244 ~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          244 KVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             TCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            6789999 99999999999999999999999999999998763

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=5e-50  Score=337.47  Aligned_cols=246  Identities=21%  Similarity=0.299  Sum_probs=201.1

Q ss_pred             cCCCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHH
Q 024551            4 AAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQRE   83 (266)
Q Consensus         4 ~~~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~   83 (266)
                      +.++....++|+++||++|||||++|||+++|++|+++|++|++++|+++.+.+..++.   +  +.++++|++|+++++
T Consensus        13 ~~~~~~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~Dv~~~~~v~   87 (260)
T 3gem_A           13 GRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---G--AVALYGDFSCETGIM   87 (260)
T ss_dssp             --------------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---T--CEEEECCTTSHHHHH
T ss_pred             cccCcccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---C--CeEEECCCCCHHHHH
Confidence            34445555678899999999999999999999999999999999999987664433332   2  778999999999999


Q ss_pred             HHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC
Q 024551           84 KLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP  163 (266)
Q Consensus        84 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~  163 (266)
                      ++++++.+.+ +++|+||||||+..... .+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.+
T Consensus        88 ~~~~~~~~~~-g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  165 (260)
T 3gem_A           88 AFIDLLKTQT-SSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS  165 (260)
T ss_dssp             HHHHHHHHHC-SCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS
T ss_pred             HHHHHHHHhc-CCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC
Confidence            9999999998 78999999999876555 566889999999999999999999999999998889999999999999999


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHH
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      +...|++||+|+++|+++++.|+++ +||||+|+||+++|++....      ..........|++|+.+|+|+|++++||
T Consensus       166 ~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~------~~~~~~~~~~p~~r~~~~edva~~v~~L  238 (260)
T 3gem_A          166 KHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDA------AYRANALAKSALGIEPGAEVIYQSLRYL  238 (260)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC---------------------CCSCCCCCTHHHHHHHHHH
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCH------HHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999998 69999999999999864321      1123445568999999999999999999


Q ss_pred             hcCCCCCccccEEEeCCCccCC
Q 024551          244 CLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +  .++++||+.|.||||+++.
T Consensus       239 ~--~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          239 L--DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             H--HCSSCCSCEEEESTTTTTC
T ss_pred             h--hCCCCCCCEEEECCCcccC
Confidence            9  4789999999999999875

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-50  Score=335.97  Aligned_cols=246  Identities=28%  Similarity=0.340  Sum_probs=221.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+.+ +++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence            6899999999999999999999999999999999999998888887777789999999999999999999999998 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      |+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+....|++||++++
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  160 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  160 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            9999999988777888899999999999999999999999999998876 689999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--h-----hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--L-----LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +|+++++.|++++||+||+|+||+++|++.......  .     ............|++|+.+|+|+|++++||+++.++
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~  240 (256)
T 1geg_A          161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD  240 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999999999999999999999874321100  0     001112334557899999999999999999999999


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      |+||+.|.+|||+++
T Consensus       241 ~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          241 YMTGQSLLIDGGMVF  255 (256)
T ss_dssp             TCCSCEEEESSSSSC
T ss_pred             CCCCCEEEeCCCccC
Confidence            999999999999875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1e-49  Score=335.54  Aligned_cols=249  Identities=26%  Similarity=0.340  Sum_probs=218.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999998888888653  33788999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ + +|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++...|++|
T Consensus        83 ~~-g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (260)
T 2z1n_A           83 LG-G-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM  160 (260)
T ss_dssp             TT-C-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             hc-C-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence            98 6 999999999887778888999999999999999999999999999988878999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-----h-hHHH-HHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-----L-LVQE-YVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-----~-~~~~-~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      |+++++|+++++.|++++||+||+|+||+++|++.......     . .... ........|++|+.+|+|+|++++||+
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~  240 (260)
T 2z1n_A          161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLA  240 (260)
T ss_dssp             THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999987621100     0 0000 123344578899999999999999999


Q ss_pred             cCCCCCccccEEEeCCCccC
Q 024551          245 LPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ++.++++||+.|.+|||+++
T Consensus       241 s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          241 SEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             SGGGTTCCSCEEEESTTTTC
T ss_pred             CccccCCCCCEEEeCCCccC
Confidence            99999999999999999864

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.2e-49  Score=336.09  Aligned_cols=246  Identities=25%  Similarity=0.417  Sum_probs=221.2

Q ss_pred             cccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHH-HHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMI-NERIQEWES-KGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        13 ~~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~-~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      .++++||+++||||+  +|||++++++|+++|++|++++|+.+.. ++..+++.+ .+.++.++++|++|++++++++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence            467899999999999  9999999999999999999998876554 666666654 367899999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC--CCch
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI--PRLS  166 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~--~~~~  166 (266)
                      +.+.+ +++|+||||||+....++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.  ++..
T Consensus        95 ~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  173 (267)
T 3gdg_A           95 VVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQT  173 (267)
T ss_dssp             HHHHT-SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCH
T ss_pred             HHHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCC
Confidence            99998 79999999999988888889999999999999999999999999999998888999999999988765  5788


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .|++||+++++|+++++.|++++ |+||+|+||+++|++..... ..   .........|++|+.+|+|+|++++||+++
T Consensus       174 ~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~-~~---~~~~~~~~~~~~r~~~~~dva~~~~~l~s~  248 (267)
T 3gdg_A          174 SYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVP-KE---TQQLWHSMIPMGRDGLAKELKGAYVYFASD  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSC-HH---HHHHHHTTSTTSSCEETHHHHHHHHHHHST
T ss_pred             cchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCC-HH---HHHHHHhcCCCCCCcCHHHHHhHhheeecC
Confidence            99999999999999999999987 99999999999999875432 21   223455678999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccC
Q 024551          247 AASYITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~  264 (266)
                      .++++||++|.+|||+++
T Consensus       249 ~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          249 ASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             TCTTCCSCEEEESTTGGG
T ss_pred             ccccccCCEEEECCceec
Confidence            999999999999999985

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-49  Score=342.86  Aligned_cols=244  Identities=26%  Similarity=0.309  Sum_probs=220.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEec-CChhHHHHHHHHHH-hcCCeeEEEeccCCCHH------------
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG-RDQNMINERIQEWE-SKGFKVTGSVCDLSFGD------------   80 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~-r~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~------------   80 (266)
                      ++++|++|||||++|||++++++|+++|++|++++ |+++.++++.+++. ..+.++.++++|++|++            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            38999999999999999999999999999999999 99999999888886 45678999999999999            


Q ss_pred             -----HHHHHHHHHHhhcCCcccEEEeccccccccCCCCCC--------------HHHHHHHhccchhhHHHHHHHHHHH
Q 024551           81 -----QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYT--------------LEEYSSVMSTNVESSYHLCQLAHPL  141 (266)
Q Consensus        81 -----~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~  141 (266)
                           +++++++++.+.+ +++|+||||||+....++.+.+              .++|++.+++|+.++++++++++|.
T Consensus       123 ~~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 9999999999998 7899999999988777777888              9999999999999999999999999


Q ss_pred             HHhcC------CCeEEEEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhH
Q 024551          142 LKASG------NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV  215 (266)
Q Consensus       142 m~~~~------~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~  215 (266)
                      |++++      .|+||++||..+..+.++...|++||+++++|++.++.|++++||+||+|+||+++|++ .. . .   
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~-~-~---  275 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM-P-P---  275 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS-C-H---
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc-c-H---
Confidence            98876      78999999999999999999999999999999999999999999999999999999998 32 2 1   


Q ss_pred             HHHHHHHhcCCCC-CCCCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          216 QEYVKLIAKTPLA-RSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       216 ~~~~~~~~~~~~~-~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ..+.......|++ |+.+|+|+|++++||+++...++||++|.+|||+++.
T Consensus       276 ~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          276 AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence            1223445567888 9999999999999999999999999999999999764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2.6e-49  Score=334.30  Aligned_cols=246  Identities=26%  Similarity=0.338  Sum_probs=222.7

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEE-ecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      -+.++.+|++|||||++|||++++++|+++|++|++ ..|+.+.+++..+++.+.+.++.++++|++|+++++++++++.
T Consensus        20 ~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (267)
T 4iiu_A           20 FQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEI   99 (267)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999965 6688888999999998888899999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHH-hcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLK-ASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      +.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.+++.|. +++.|+||++||..+..+.++...|+
T Consensus       100 ~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  178 (267)
T 4iiu_A          100 AQH-GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYS  178 (267)
T ss_dssp             HHH-CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHh-CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhH
Confidence            998 7899999999998888888999999999999999999999999999886 55679999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+|+++|+++++.|++++||+|++|+||+++|++....     ...........|.+|+.+|+|+|++++||+++..+
T Consensus       179 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~  253 (267)
T 4iiu_A          179 AAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-----ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAG  253 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-----HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccc
Confidence            9999999999999999999999999999999999987654     22234556678999999999999999999999999


Q ss_pred             CccccEEEeCCCcc
Q 024551          250 YITGQVISIDGGYT  263 (266)
Q Consensus       250 ~~~G~~l~vdgG~~  263 (266)
                      ++||++|.+|||+.
T Consensus       254 ~itG~~i~vdGG~~  267 (267)
T 4iiu_A          254 YVTRQVISINGGML  267 (267)
T ss_dssp             TCCSCEEEESTTCC
T ss_pred             CccCCEEEeCCCcC
Confidence            99999999999974

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.6e-50  Score=342.70  Aligned_cols=248  Identities=25%  Similarity=0.339  Sum_probs=214.2

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC------------hhHHHHHHHHHHhcCCeeEEEeccCCCH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD------------QNMINERIQEWESKGFKVTGSVCDLSFG   79 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~D~~~~   79 (266)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++++|++|+
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            3456899999999999999999999999999999999997            7778888888887788999999999999


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA  159 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~  159 (266)
                      ++++++++++.+.+ +++|+||||||+....  .+.+.++|++.+++|+.++++++++++|+|.  +.|+||++||..+.
T Consensus        84 ~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~  158 (287)
T 3pxx_A           84 AAVSRELANAVAEF-GKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAGL  158 (287)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHc-CCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCcEEEEeccchhc
Confidence            99999999999999 7899999999987654  2378899999999999999999999999993  35899999998877


Q ss_pred             CCC-----------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc----------chhHHHH
Q 024551          160 ISI-----------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN----------DLLVQEY  218 (266)
Q Consensus       160 ~~~-----------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~----------~~~~~~~  218 (266)
                      .+.           ++...|++||+++++|+++++.|++++||+||+|+||+++|++......          .......
T Consensus       159 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T 3pxx_A          159 IAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADAL  238 (287)
T ss_dssp             HHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred             ccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHH
Confidence            654           6678999999999999999999999999999999999999998764210          0111111


Q ss_pred             HH--HHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          219 VK--LIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       219 ~~--~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ..  .....| +|+.+|+|+|++++||+++.++|+||+.|.||||+++.
T Consensus       239 ~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          239 LAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            11  222344 88999999999999999999999999999999999863

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=2.1e-49  Score=337.60  Aligned_cols=251  Identities=27%  Similarity=0.416  Sum_probs=219.2

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-INERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .+.++++||++|||||++|||++++++|+++|++|++++|+.+. .+++.+++.+.+.++.++++|++|+++++++++++
T Consensus        22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999998654 56677777777778999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC-chhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR-LSAY  168 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~-~~~y  168 (266)
                      .+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+  +.|+||++||..+..+.+. ...|
T Consensus       102 ~~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y  178 (283)
T 1g0o_A          102 VKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKAVPKHAVY  178 (283)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGTCSSCSSCHHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechhhccCCCCCCcch
Confidence            9998 7899999999988777888899999999999999999999999999993  4689999999998887764 8999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc----h---hHHHHHHHHh--cCCCCCCCCccchHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND----L---LVQEYVKLIA--KTPLARSAEPNEISPL  239 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~----~---~~~~~~~~~~--~~~~~~~~~~~eia~~  239 (266)
                      ++||+++++|+++++.|++++||+||+|+||+++|++.......    .   ..........  ..|++|+.+|+|+|++
T Consensus       179 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  258 (283)
T 1g0o_A          179 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV  258 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999874321100    0   1111223334  6799999999999999


Q ss_pred             HHHHhcCCCCCccccEEEeCCCccC
Q 024551          240 VAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       240 ~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ++||+++.++|+||+.|.+|||+++
T Consensus       259 v~~l~s~~~~~itG~~i~vdgG~~~  283 (283)
T 1g0o_A          259 VCFLASNDGGWVTGKVIGIDGGACM  283 (283)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHhCccccCcCCCEEEeCCCccC
Confidence            9999999999999999999999864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-49  Score=340.69  Aligned_cols=251  Identities=29%  Similarity=0.385  Sum_probs=221.7

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC---eeEEEeccCCCHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF---KVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.   ++.++++|++|+++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999999888877665   7899999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccC--CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-CCch
Q 024551           90 SSVFDGKLNILVNNAALVVMKR--ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-PRLS  166 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-~~~~  166 (266)
                      .+.+ +++|+||||||+....+  +.+.+.++|++.+++|+.++++++++++|.|.+++ |+||++||..+..+. ++..
T Consensus       101 ~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~  178 (297)
T 1xhl_A          101 LAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYP  178 (297)
T ss_dssp             HHHH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSH
T ss_pred             HHhc-CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcc
Confidence            9998 78999999999876666  88899999999999999999999999999998876 999999999998888 8899


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-----hHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-----LVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++........     ............|++|+.+|+|+|++++
T Consensus       179 ~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  258 (297)
T 1xhl_A          179 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIV  258 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999754321011     0111122234468899999999999999


Q ss_pred             HHhcCC-CCCccccEEEeCCCccCC
Q 024551          242 FLCLPA-ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       242 ~l~s~~-~~~~~G~~l~vdgG~~~~  265 (266)
                      ||+++. ++++||+.|.+|||+++.
T Consensus       259 ~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          259 FLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHhCCcccCCccCcEEEECCCcccc
Confidence            999987 889999999999998753

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.9e-50  Score=343.31  Aligned_cols=239  Identities=25%  Similarity=0.308  Sum_probs=217.2

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh-------HHHHHHHHHHhcCCeeEEEeccCCCHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-------MINERIQEWESKGFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~   84 (266)
                      ..|++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++.+.+.++.++++|++|++++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            446789999999999999999999999999999999999887       5777888888878899999999999999999


Q ss_pred             HHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-C
Q 024551           85 LIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-P  163 (266)
Q Consensus        85 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-~  163 (266)
                      +++++.+.+ +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+. +
T Consensus        83 ~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  161 (285)
T 3sc4_A           83 AVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL  161 (285)
T ss_dssp             HHHHHHHHH-SCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS
T ss_pred             HHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC
Confidence            999999999 78999999999988888999999999999999999999999999999998888999999999988876 7


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecC-cccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHH
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW-AVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      +...|++||+|+++|+++++.|++++|||||+|+|| +++|++...           ......+++|+.+|||+|++++|
T Consensus       162 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~-----------~~~~~~~~~r~~~pedvA~~~~~  230 (285)
T 3sc4_A          162 RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN-----------LLGGDEAMARSRKPEVYADAAYV  230 (285)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH-----------HHTSCCCCTTCBCTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh-----------hccccccccCCCCHHHHHHHHHH
Confidence            889999999999999999999999999999999999 688865321           12234578899999999999999


Q ss_pred             HhcCCCCCccccEEEeCCCcc
Q 024551          243 LCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      |+++.+ ++||+.+.+|||+.
T Consensus       231 l~s~~~-~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          231 VLNKPS-SYTGNTLLCEDVLL  250 (285)
T ss_dssp             HHTSCT-TCCSCEEEHHHHHH
T ss_pred             HhCCcc-cccceEEEEcCchh
Confidence            999888 99999999999875

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=3.3e-49  Score=331.14  Aligned_cols=245  Identities=32%  Similarity=0.431  Sum_probs=223.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++||+++||||++|||++++++|+++|++|+++ .|+.+.+++..+++.+.+.++.++.+|++|.++++++++++.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999874 7888889999999988888999999999999999999999988761


Q ss_pred             -----CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           95 -----GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        95 -----~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                           +++|+||||||+....++.+.+.++|++.+++|+.+++++++.++|+|++  .|+||++||..+..+.+....|+
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~  162 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYS  162 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHHH
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchhH
Confidence                 34999999999988888888999999999999999999999999999944  47999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+++++|+++++.|++++||+||+|+||+++|++...........  .......|++|+.+|+|+|++++||+++.++
T Consensus       163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  240 (255)
T 3icc_A          163 MTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMK--QYATTISAFNRLGEVEDIADTAAFLASPDSR  240 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHH--HHHHHTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHH--HhhhccCCcCCCCCHHHHHHHHHHHhCcccC
Confidence            99999999999999999999999999999999999988765543322  3445567899999999999999999999999


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      ++||++|.+|||+++
T Consensus       241 ~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          241 WVTGQLIDVSGGSCL  255 (255)
T ss_dssp             TCCSCEEEESSSTTC
T ss_pred             CccCCEEEecCCeeC
Confidence            999999999999875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2e-49  Score=332.83  Aligned_cols=247  Identities=32%  Similarity=0.451  Sum_probs=218.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|++|||||++|||++++++|+++|++|++++|+++  ++..+++.+.+.++.++++|++|+++++++++++.+.+ 
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   77 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-   77 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence            367999999999999999999999999999999999876  55667776666788999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++...|++||++
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHG  157 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHH
Confidence            78999999999887778888999999999999999999999999999998878999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chh---H-HHHHHH-HhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLL---V-QEYVKL-IAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~---~-~~~~~~-~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +++|+++++.|++++||+||+|+||+++|++......  ...   . ...... ....|++|+.+|+|+|++++||+++.
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  237 (255)
T 2q2v_A          158 VVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEA  237 (255)
T ss_dssp             HHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999987542110  000   0 000222 34578899999999999999999998


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      .++++|+.+.+|||+++
T Consensus       238 ~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          238 GSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCEEEECCCccC
Confidence            99999999999999875

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=5.9e-49  Score=331.85  Aligned_cols=247  Identities=19%  Similarity=0.274  Sum_probs=220.9

Q ss_pred             ccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        14 ~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ++++||++|||||+  +|||+++|++|+++|++|++++|+....+...+...+.+. ++.++++|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            46899999999999  7799999999999999999999997666655555555544 79999999999999999999999


Q ss_pred             hhcCCcccEEEecccccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCch
Q 024551           91 SVFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  166 (266)
                      +.+ +++|+||||||+..    ..++.+.+.++|++.+++|+.+++++++.++|+|++  .|+||++||..+..+.++..
T Consensus        83 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  159 (266)
T 3oig_A           83 EQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYN  159 (266)
T ss_dssp             HHH-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTH
T ss_pred             HHh-CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcc
Confidence            998 78999999999875    467788899999999999999999999999999975  58999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.......  ...........|++|..+|+|+|++++||+++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~  237 (266)
T 3oig_A          160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDF--NSILKDIEERAPLRRTTTPEEVGDTAAFLFSD  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH--HHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccch--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999987764332  22234556678999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccCC
Q 024551          247 AASYITGQVISIDGGYTAG  265 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~~  265 (266)
                      ...++||+.|.+|||++..
T Consensus       238 ~~~~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          238 MSRGITGENLHVDSGFHIT  256 (266)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             chhcCcCCEEEECCCeEEe
Confidence            9999999999999999864

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=8.4e-50  Score=338.60  Aligned_cols=235  Identities=23%  Similarity=0.314  Sum_probs=211.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-------HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-------INERIQEWESKGFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...+.++.++++|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            67899999999999999999999999999999999998763       67777788777889999999999999999999


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC--CCC
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS--IPR  164 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~--~~~  164 (266)
                      +++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+  .++
T Consensus        82 ~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  160 (274)
T 3e03_A           82 AATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA  160 (274)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH
T ss_pred             HHHHHHc-CCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC
Confidence            9999999 7899999999998888888999999999999999999999999999999888899999999998887  677


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecC-cccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHH
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW-AVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      ...|++||+|+++|+++++.|++++|||||+|+|| +++|++....             ...+..+..+|||+|++++||
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~-------------~~~~~~~~~~pedvA~~v~~l  227 (274)
T 3e03_A          161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML-------------PGVDAAACRRPEIMADAAHAV  227 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--------------------CCCGGGSBCTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc-------------ccccccccCCHHHHHHHHHHH
Confidence            88999999999999999999999999999999999 6899886321             123445678999999999999


Q ss_pred             hcCCCCCccccEEEeCCCcc
Q 024551          244 CLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +++.++++||++| +|||++
T Consensus       228 ~s~~~~~itG~~i-~~~g~~  246 (274)
T 3e03_A          228 LTREAAGFHGQFL-IDDEVL  246 (274)
T ss_dssp             HTSCCTTCCSCEE-EHHHHH
T ss_pred             hCccccccCCeEE-EcCcch
Confidence            9999999999999 788764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-49  Score=337.09  Aligned_cols=248  Identities=29%  Similarity=0.416  Sum_probs=220.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC---eeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF---KVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.   ++.++++|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999998888877655   799999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccC----CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-CCch
Q 024551           92 VFDGKLNILVNNAALVVMKR----ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-PRLS  166 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-~~~~  166 (266)
                      .+ +++|+||||||.....+    +.+.+.++|++.+++|+.+++++++.++|.|.+++ |+||++||..+..+. ++..
T Consensus        83 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~  160 (280)
T 1xkq_A           83 QF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFL  160 (280)
T ss_dssp             HH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSH
T ss_pred             hc-CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCccc
Confidence            98 78999999999876666    77889999999999999999999999999998776 999999999998887 8899


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc-cch----hHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL-NDL----LVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++..... ...    ............|++|+.+|+|+|++++
T Consensus       161 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~  240 (280)
T 1xkq_A          161 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL  240 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999754321 110    0111122234468899999999999999


Q ss_pred             HHhcCC-CCCccccEEEeCCCccC
Q 024551          242 FLCLPA-ASYITGQVISIDGGYTA  264 (266)
Q Consensus       242 ~l~s~~-~~~~~G~~l~vdgG~~~  264 (266)
                      ||+++. .+++||+.|.+|||+++
T Consensus       241 ~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          241 FLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HhcCcccccCccCCeEEECCCccc
Confidence            999987 88999999999999875

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.2e-50  Score=336.31  Aligned_cols=240  Identities=23%  Similarity=0.326  Sum_probs=199.8

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ..|++++|++|||||++|||++++++|+++|++|++++|+.+..   .++   .+.++.++++|++|+++++++++.+.+
T Consensus         3 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (257)
T 3tl3_A            3 GSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VAD---LGDRARFAAADVTDEAAVASALDLAET   76 (257)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHH---TCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHh---cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999965432   222   356899999999999999999999887


Q ss_pred             hcCCcccEEEeccccccccC----CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh--------cCCCeEEEEecCCCC
Q 024551           92 VFDGKLNILVNNAALVVMKR----ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA--------SGNASIVFMSSVAGA  159 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~--------~~~g~iv~vss~~~~  159 (266)
                       + +++|+||||||+....+    ..+.+.++|++.+++|+.++++++++++|+|.+        ++.|+||++||..+.
T Consensus        77 -~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           77 -M-GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             -H-SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             -h-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence             7 78999999999875432    335799999999999999999999999999987        567899999999999


Q ss_pred             CCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-CCCCCccchHH
Q 024551          160 ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISP  238 (266)
Q Consensus       160 ~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~eia~  238 (266)
                      .+.++...|++||+|+++|+++++.|++++|||||+|+||+++|++.....+ .   .........|. +|+.+|||+|+
T Consensus       155 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~---~~~~~~~~~~~~~r~~~p~dva~  230 (257)
T 3tl3_A          155 DGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPE-E---ARASLGKQVPHPSRLGNPDEYGA  230 (257)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CH-H---HHHHHHHTSSSSCSCBCHHHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccH-H---HHHHHHhcCCCCCCccCHHHHHH
Confidence            9988899999999999999999999999999999999999999998766422 1   22344556777 99999999999


Q ss_pred             HHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          239 LVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       239 ~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +++||+++  .++||+.|.+|||+++.
T Consensus       231 ~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          231 LAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHHhcC--CCCCCCEEEECCCccCC
Confidence            99999986  79999999999999864

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-49  Score=333.80  Aligned_cols=251  Identities=23%  Similarity=0.267  Sum_probs=214.1

Q ss_pred             cCCccccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      ...+..++++|++|||||+  +|||++++++|+++|++|++++|+....+ ..+++.+..+++.++++|++|++++++++
T Consensus         5 ~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A            5 HHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RITEFAAEFGSELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             ----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH-HHHHHHHHcCCcEEEECCCCCHHHHHHHH
Confidence            3456677999999999998  99999999999999999999999855443 34444444456889999999999999999


Q ss_pred             HHHHhhcCCcccEEEeccccccc----cCCCC-CCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC
Q 024551           87 ETVSSVFDGKLNILVNNAALVVM----KRATE-YTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS  161 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~  161 (266)
                      +++.+.+ +++|+||||||+...    +++.+ .+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+
T Consensus        84 ~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~  160 (271)
T 3ek2_A           84 ASLKTHW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERA  160 (271)
T ss_dssp             HHHHHHC-SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSB
T ss_pred             HHHHHHc-CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccC
Confidence            9999998 789999999998764    55566 899999999999999999999999999975  579999999999999


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+++|++......  ............|++|+.+|+|+|++++
T Consensus       161 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~pedva~~i~  238 (271)
T 3ek2_A          161 IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKS--FGKILDFVESNSPLKRNVTIEQVGNAGA  238 (271)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHH--HHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccc--hHHHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998776432  1223345566789999999999999999


Q ss_pred             HHhcCCCCCccccEEEeCCCccCC
Q 024551          242 FLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ||+++.+.++||+.|.+|||+++.
T Consensus       239 ~l~s~~~~~~tG~~i~vdgG~~~~  262 (271)
T 3ek2_A          239 FLLSDLASGVTAEVMHVDSGFNAV  262 (271)
T ss_dssp             HHHSGGGTTCCSEEEEESTTGGGB
T ss_pred             HHcCcccCCeeeeEEEECCCeeee
Confidence            999999999999999999999763

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7e-50  Score=341.11  Aligned_cols=246  Identities=24%  Similarity=0.300  Sum_probs=218.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC---eEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~---~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      .+++||++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++.+.  +.++.++++|++|++++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            458999999999999999999999999998   9999999999999999998765  56899999999999999999999


Q ss_pred             HHhhcCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh
Q 024551           89 VSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      +.+.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...
T Consensus       109 ~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~  187 (287)
T 3rku_A          109 LPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSI  187 (287)
T ss_dssp             SCGGG-CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHH
T ss_pred             HHHhc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCch
Confidence            99998 78999999999875 66788999999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++||+|+++|+++++.|++++|||||+|+||+++|++....................|    .+|||+|++++||+++.
T Consensus       188 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p----~~pedvA~~v~~l~s~~  263 (287)
T 3rku_A          188 YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP----LMADDVADLIVYATSRK  263 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCC----EEHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCC----CCHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999987532221111111112222223    38999999999999999


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      ..+++|+.+.+|||...
T Consensus       264 ~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          264 QNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             TTEEEEEEEEEETTEEE
T ss_pred             CCeEecceEEeeCCCCC
Confidence            99999999999999764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=6.2e-49  Score=334.28  Aligned_cols=248  Identities=23%  Similarity=0.299  Sum_probs=218.7

Q ss_pred             ccccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        12 ~~~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .+.++++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+...++.++++|++|+++++++++++
T Consensus        20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHH
Confidence            3456889999999988  8899999999999999999999987  34555556555567899999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccc----cCCCC-CCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC
Q 024551           90 SSVFDGKLNILVNNAALVVM----KRATE-YTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR  164 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~  164 (266)
                      .+.+ +++|+||||||+...    .++.+ .+.++|++.+++|+.++++++++++|.|+++ .|+||++||..+..+.++
T Consensus        98 ~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~  175 (280)
T 3nrc_A           98 GKVW-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPS  175 (280)
T ss_dssp             HHHC-SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTT
T ss_pred             HHHc-CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCC
Confidence            9998 799999999998754    44445 8999999999999999999999999999876 689999999999999999


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++.......  ...........|++|+.+|+|+|+.++||+
T Consensus       176 ~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~~~~~pedvA~~v~~l~  253 (280)
T 3nrc_A          176 YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF--KKMLDYNAMVSPLKKNVDIMEVGNTVAFLC  253 (280)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH--HHHHHHHHHHSTTCSCCCHHHHHHHHHHTT
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999987654322  222345566789999999999999999999


Q ss_pred             cCCCCCccccEEEeCCCccCC
Q 024551          245 LPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ++...++||+.|.+|||+++.
T Consensus       254 s~~~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          254 SDMATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CcccCCcCCcEEEECCCcccc
Confidence            999999999999999999875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.5e-49  Score=329.63  Aligned_cols=240  Identities=24%  Similarity=0.307  Sum_probs=211.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ||++|||||++|||+++|++|+++|  +.|++++|+++.++++.+++   +.++.++++|++|+++++++++++.+.+ +
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH-G   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc-C
Confidence            7999999999999999999999985  78999999999988887776   4578999999999999999999999999 7


Q ss_pred             cccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           96 KLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        96 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      ++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++++ |+||++||..+..+.++...|++||++
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  156 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAA  156 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHH
Confidence            9999999999864 47888999999999999999999999999999998875 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-----hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC-C
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-----LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA-A  248 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~-~  248 (266)
                      +++|+++++.|+  +|||||+|+||+++|++........     ............|++|+.+|+|+|++++||+++. +
T Consensus       157 ~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~  234 (254)
T 3kzv_A          157 LNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIP  234 (254)
T ss_dssp             HHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhccc
Confidence            999999999998  6899999999999999976543211     1223345556679999999999999999999998 4


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      +|+||+.|.+|||...
T Consensus       235 ~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          235 DGVNGQYLSYNDPALA  250 (254)
T ss_dssp             GGGTTCEEETTCGGGG
T ss_pred             CCCCccEEEecCcccc
Confidence            9999999999999753

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.2e-48  Score=331.68  Aligned_cols=244  Identities=26%  Similarity=0.332  Sum_probs=212.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhc-CCeeEEEeccCCCH----HHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESK-GFKVTGSVCDLSFG----DQREKLIE   87 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~----~~i~~~~~   87 (266)
                      .++++|++|||||++|||++++++|+++|++|++++| +++.++++.+++.+. +.++.++++|++|+    ++++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            3478999999999999999999999999999999999 999999888888765 67899999999999    99999999


Q ss_pred             HHHhhcCCcccEEEeccccccccCCCCCCH-----------HHHHHHhccchhhHHHHHHHHHHHHHhcCC------CeE
Q 024551           88 TVSSVFDGKLNILVNNAALVVMKRATEYTL-----------EEYSSVMSTNVESSYHLCQLAHPLLKASGN------ASI  150 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~------g~i  150 (266)
                      ++.+.+ +++|+||||||+....++.+.+.           ++|++.+++|+.++++++++++|.|. ++.      |+|
T Consensus        87 ~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~i  164 (276)
T 1mxh_A           87 CSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSV  164 (276)
T ss_dssp             HHHHHH-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEE
T ss_pred             HHHHhc-CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEE
Confidence            999998 78999999999887777778888           99999999999999999999999997 545      899


Q ss_pred             EEEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCC-
Q 024551          151 VFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-  229 (266)
Q Consensus       151 v~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-  229 (266)
                      |++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+  . ......   ........|++| 
T Consensus       165 v~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~-~~~~~~---~~~~~~~~p~~r~  238 (276)
T 1mxh_A          165 VNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--P-AMPQET---QEEYRRKVPLGQS  238 (276)
T ss_dssp             EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--S-SSCHHH---HHHHHTTCTTTSC
T ss_pred             EEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--c-cCCHHH---HHHHHhcCCCCCC
Confidence            999999999999999999999999999999999999999999999999999998  2 222211   123345578888 


Q ss_pred             CCCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          230 SAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       230 ~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +.+|+|+|++++||+++...++||++|.+|||+++.
T Consensus       239 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  274 (276)
T 1mxh_A          239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA  274 (276)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCHHHHHHHHHHHhCccccCccCcEEEECCchhcc
Confidence            999999999999999998999999999999998764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=7.3e-49  Score=330.81  Aligned_cols=251  Identities=30%  Similarity=0.392  Sum_probs=219.9

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      |...+++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++..   ++.++++|++|+++++++++++
T Consensus         4 m~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~d~~~v~~~~~~~   80 (263)
T 3ak4_A            4 MAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---GGFAVEVDVTKRASVDAAMQKA   80 (263)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT---CCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEeCCCHHHHHHHHHHH
Confidence            3445678999999999999999999999999999999999999887776665532   6788999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      .+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.+....|
T Consensus        81 ~~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (263)
T 3ak4_A           81 IDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHY  159 (263)
T ss_dssp             HHHH-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhH
Confidence            9998 7899999999988777888899999999999999999999999999998876 6999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc---h----hHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND---L----LVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      ++||+++++|+++++.|++++||+||+|+||+++|++.......   .    ............|++|+.+|+|+|++++
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~  239 (263)
T 3ak4_A          160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVV  239 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999874321100   0    0111233445678999999999999999


Q ss_pred             HHhcCCCCCccccEEEeCCCccC
Q 024551          242 FLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ||+++..++++|+.|.+|||+++
T Consensus       240 ~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          240 FLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHhCccccCCCCCEEEECcCEeC
Confidence            99999889999999999999875

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.3e-49  Score=332.41  Aligned_cols=242  Identities=29%  Similarity=0.386  Sum_probs=215.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++++|++|+++++++++++.+.+ 
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   77 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc-
Confidence            368999999999999999999999999999999999998887776665   4578899999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++...|++||++
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  157 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence            78999999999887777888999999999999999999999999999998878999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCC-CccchHHHHHHHhcCCCCCccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSA-EPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      +++|+++++.|++++||+||+|+||+++|++....... ..   .......|++|+. +|+|+|+.++||+++.+++++|
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~---~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG  233 (254)
T 1hdc_A          158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR-QG---EGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTG  233 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC-CS---TTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh-HH---HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCC
Confidence            99999999999999999999999999999864321000 00   1112235778898 9999999999999998899999


Q ss_pred             cEEEeCCCccC
Q 024551          254 QVISIDGGYTA  264 (266)
Q Consensus       254 ~~l~vdgG~~~  264 (266)
                      +.+.+|||+++
T Consensus       234 ~~~~vdgG~~~  244 (254)
T 1hdc_A          234 AELAVDGGWTT  244 (254)
T ss_dssp             CEEEESTTTTT
T ss_pred             CEEEECCCccc
Confidence            99999999875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-49  Score=331.19  Aligned_cols=243  Identities=28%  Similarity=0.391  Sum_probs=218.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++++|++|+++++++++++.+.+ 
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   78 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            478999999999999999999999999999999999999888877776   5678899999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++ |+||++||..+..+.++...|++||++
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHH
Confidence            7899999999988777888999999999999999999999999999998877 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccC--CcEEEEEecCcccCCCCCCCccchhHHHHHH-HHh---cCCCCCCCCccchHHHHHHHhcCCC
Q 024551          175 INQLTKNLACEWATD--SIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIA---KTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       175 l~~~~~~~a~el~~~--gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +++|+++++.|++++  ||+||+|+||+++|++..........   .. ...   ..|++|+.+|+|+|++++||+++..
T Consensus       158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  234 (253)
T 1hxh_A          158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS---KEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES  234 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC---HHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhh---HHHHhhhhccCccCCCCCHHHHHHHHHHHcCccc
Confidence            999999999999988  99999999999999874321111111   11 222   4688899999999999999999999


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      ++++|+.|.+|||++..
T Consensus       235 ~~~tG~~~~vdgG~~~~  251 (253)
T 1hxh_A          235 SVMSGSELHADNSILGM  251 (253)
T ss_dssp             TTCCSCEEEESSSCTTT
T ss_pred             cCCCCcEEEECCCcccc
Confidence            99999999999998764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-49  Score=334.12  Aligned_cols=246  Identities=29%  Similarity=0.427  Sum_probs=215.2

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ..+++||++|||||++|||++++++|+++|++|++++|+++.++++.+++.    .+.++++|++|+++++++++++.+.
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            345889999999999999999999999999999999999988877766542    3788999999999999999999999


Q ss_pred             cCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|+++ .|+||++||..+..+.+....|++|
T Consensus        80 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  157 (270)
T 1yde_A           80 F-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVAT  157 (270)
T ss_dssp             H-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHH
Confidence            8 78999999999865 3678888999999999999999999999999999776 5899999999888888999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      |+++++|+++++.|++++||+||+|+||+++|++......  ..............|++|+.+|+|+|++++||+++ ++
T Consensus       158 Kaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~  236 (270)
T 1yde_A          158 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-AN  236 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CT
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CC
Confidence            9999999999999999999999999999999987432110  11111122233567999999999999999999998 78


Q ss_pred             CccccEEEeCCCccCC
Q 024551          250 YITGQVISIDGGYTAG  265 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~~  265 (266)
                      |+||+.|.+|||++++
T Consensus       237 ~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          237 FCTGIELLVTGGAELG  252 (270)
T ss_dssp             TCCSCEEEESTTTTSC
T ss_pred             CcCCCEEEECCCeecc
Confidence            9999999999998764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=8e-49  Score=330.58  Aligned_cols=247  Identities=25%  Similarity=0.364  Sum_probs=209.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++.+|+++||||++|||++++++|+++|++|++++|+. +..+.+.+.+.+.+.++.++++|++|+++++++++++.+.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999986654 4455566666666678999999999999999999999999


Q ss_pred             cCCcccEEEeccc--cccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecC-CC-CCCCCCchhh
Q 024551           93 FDGKLNILVNNAA--LVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSV-AG-AISIPRLSAY  168 (266)
Q Consensus        93 ~~~~id~lv~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~-~~-~~~~~~~~~y  168 (266)
                      + +++|+||||||  .....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||. .+ ..+.++...|
T Consensus        83 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y  161 (264)
T 3i4f_A           83 F-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAF  161 (264)
T ss_dssp             H-SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred             h-CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchh
Confidence            8 78999999999  445677888999999999999999999999999999998888999999988 43 5567778999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+++++|+++++.|++++||+||+|+||+++|++.....+.    .........|++|+.+|+|+|++++||+++..
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~  237 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE----ARQLKEHNTPIGRSGTGEDIARTISFLCEDDS  237 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH----HHHC--------CCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH----HHHHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999987654321    12333456789999999999999999999999


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      .++||++|.+|||++..
T Consensus       238 ~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          238 DMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             TTCCSCEEEESCSCCCC
T ss_pred             CCCCCcEEEEcCceeec
Confidence            99999999999999863

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.9e-49  Score=329.44  Aligned_cols=245  Identities=33%  Similarity=0.447  Sum_probs=215.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|++|||||++|||++++++|+++|++|++++|+++. ++..+++.    + .++++|++|+++++++++++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~   75 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL   75 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999887 66666653    4 788999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        76 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  154 (256)
T 2d1y_A           76 -GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  154 (256)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence             7899999999998777888999999999999999999999999999999887899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      ++++|+++++.|++++||+||+|+||+++|++......  ..............|++|+.+|+|+|++++||+++..+++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~  234 (256)
T 2d1y_A          155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI  234 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999986432100  0000111223445788999999999999999999988999


Q ss_pred             cccEEEeCCCccCC
Q 024551          252 TGQVISIDGGYTAG  265 (266)
Q Consensus       252 ~G~~l~vdgG~~~~  265 (266)
                      +|+.+.+|||+++.
T Consensus       235 ~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          235 TGAILPVDGGMTAS  248 (256)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             CCCEEEECCCcccc
Confidence            99999999998753

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=5e-49  Score=341.21  Aligned_cols=243  Identities=26%  Similarity=0.341  Sum_probs=218.3

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC----------hhHHHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----------QNMINERIQEWESKGFKVTGSVCDLSFGDQR   82 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i   82 (266)
                      +..++||++|||||++|||+++|++|+++|++|++++|+          .+.++++.+++.+.+.++.++++|++|++++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA  101 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            446899999999999999999999999999999999998          7888899999988888999999999999999


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC------CCeEEEEecC
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG------NASIVFMSSV  156 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~------~g~iv~vss~  156 (266)
                      +++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.+++++++++.|+|.+.+      .|+||++||.
T Consensus       102 ~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          102 AGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            99999999999 7899999999998888889999999999999999999999999999997542      3799999999


Q ss_pred             CCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccch
Q 024551          157 AGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEI  236 (266)
Q Consensus       157 ~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei  236 (266)
                      .+..+.++...|++||+|+++|+++++.|++++|||||+|+|| ++|++..........       ......+..+|+|+
T Consensus       181 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-------~~~~~~~~~~pedv  252 (322)
T 3qlj_A          181 AGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-------TQDQDFDAMAPENV  252 (322)
T ss_dssp             HHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------------CCTTCGGGT
T ss_pred             HHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-------ccccccCCCCHHHH
Confidence            9999999999999999999999999999999999999999999 999988765443211       11122356789999


Q ss_pred             HHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          237 SPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       237 a~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      |++++||+++.++++||++|.+|||++.
T Consensus       253 a~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          253 SPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             HHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             HHHHHHHhCccccCCCCCEEEECCCccc
Confidence            9999999999999999999999999864

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.9e-49  Score=331.44  Aligned_cols=236  Identities=26%  Similarity=0.399  Sum_probs=211.5

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+++++++|++|||||++|||++++++|+++|++|++++|+.+..+         ..++.++++|++|+++++++++++.
T Consensus        21 ~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~   91 (260)
T 3un1_A           21 QSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGI   91 (260)
T ss_dssp             HHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHH
T ss_pred             hhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            3457789999999999999999999999999999999999875422         2368899999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC--CCCchhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS--IPRLSAY  168 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~--~~~~~~y  168 (266)
                      +.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+  .++...|
T Consensus        92 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y  170 (260)
T 3un1_A           92 ERF-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALA  170 (260)
T ss_dssp             HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHH
T ss_pred             HHC-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHH
Confidence            999 7899999999998888888999999999999999999999999999999988899999999887643  4456899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+++++|+++++.|++++||+||+|+||+++|++.....       ........|++|+.+|+|+|++++||  +.+
T Consensus       171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-------~~~~~~~~p~~r~~~~~dva~av~~L--~~~  241 (260)
T 3un1_A          171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET-------HSTLAGLHPVGRMGEIRDVVDAVLYL--EHA  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG-------HHHHHTTSTTSSCBCHHHHHHHHHHH--HHC
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH-------HHHHhccCCCCCCcCHHHHHHHHHHh--ccc
Confidence            999999999999999999999999999999999999875421       13445668999999999999999999  567


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      +++||+.|.+|||++++
T Consensus       242 ~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          242 GFITGEILHVDGGQNAG  258 (260)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             CCCCCcEEEECCCeecc
Confidence            89999999999999875

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.4e-48  Score=326.77  Aligned_cols=239  Identities=28%  Similarity=0.354  Sum_probs=198.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++++|+++||||++|||++++++|+++|++|++++|+++.        .+.  .+.++++|++|+++++++++++.+.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY--PFATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC--SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC--CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999998752        111  27888999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||....+++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        73 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (250)
T 2fwm_X           73 -ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA  151 (250)
T ss_dssp             -SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence             7899999999988777888999999999999999999999999999998887899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHH-HHHh-------cCCCCCCCCccchHHHHHHHhc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIA-------KTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ++++|+++++.|++++||+||+|+||+++|++..........  .. ....       ..|++|+.+|+|+|++++||++
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s  229 (250)
T 2fwm_X          152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDA--EEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLAS  229 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhH--HHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999986543211100  01 1111       4688899999999999999999


Q ss_pred             CCCCCccccEEEeCCCccCC
Q 024551          246 PAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +.++++||+.|.+|||++++
T Consensus       230 ~~~~~~tG~~i~vdGG~~~~  249 (250)
T 2fwm_X          230 DLASHITLQDIVVDGGSTLG  249 (250)
T ss_dssp             GGGTTCCSCEEEESTTTTTT
T ss_pred             ccccCCCCCEEEECCCcccC
Confidence            99999999999999999865

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2e-48  Score=330.57  Aligned_cols=249  Identities=29%  Similarity=0.412  Sum_probs=209.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH---HhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW---ESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++   ...+.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999998888887   33345788999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCC----CHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC-CCCCCCch
Q 024551           92 VFDGKLNILVNNAALVVMKRATEY----TLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG-AISIPRLS  166 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~-~~~~~~~~  166 (266)
                      .+ +++|+||||||.....++.+.    +.++|++.+++|+.+++++++.++|.|++++ |+||++||..+ ..+.++..
T Consensus        83 ~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~  160 (278)
T 1spx_A           83 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP  160 (278)
T ss_dssp             HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred             Hc-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCcc
Confidence            98 789999999998776677777    9999999999999999999999999998776 99999999998 88889999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chh---HHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLL---VQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++......  ...   ...........|++|+.+|+|+|++++
T Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~  240 (278)
T 1spx_A          161 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA  240 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999998654211  110   001223344578899999999999999


Q ss_pred             HHhcCCCCC-ccccEEEeCCCccCC
Q 024551          242 FLCLPAASY-ITGQVISIDGGYTAG  265 (266)
Q Consensus       242 ~l~s~~~~~-~~G~~l~vdgG~~~~  265 (266)
                      ||+++..++ +||+.+.+|||+++.
T Consensus       241 ~l~s~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          241 FLADRKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHcCccccCcccCcEEEECCCcccc
Confidence            999987777 999999999998754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-48  Score=327.79  Aligned_cols=242  Identities=21%  Similarity=0.293  Sum_probs=207.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+.+ +
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-G   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            468999999999999999999999999999999999999999999998888899999999999999999999999999 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+|+
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal  160 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV  160 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence            89999999999888889999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccE
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV  255 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~  255 (266)
                      ++|+++++.|+ + |||||+|+||+++|++............     .....++..+|+|+|++++||+++...+.+|+.
T Consensus       161 ~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~-----~~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i  233 (264)
T 3tfo_A          161 RAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAA-----MDTYRAIALQPADIARAVRQVIEAPQSVDTTEI  233 (264)
T ss_dssp             HHHHHHHHHHC-S-SEEEEEEEECCC----------------------------CCCHHHHHHHHHHHHHSCTTEEEEEE
T ss_pred             HHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHH-----HHhhhccCCCHHHHHHHHHHHhcCCccCccceE
Confidence            99999999998 4 9999999999999998765432211110     011122357899999999999999999999999


Q ss_pred             EEeCCCccCC
Q 024551          256 ISIDGGYTAG  265 (266)
Q Consensus       256 l~vdgG~~~~  265 (266)
                      +..++|+.++
T Consensus       234 ~i~p~~~~~~  243 (264)
T 3tfo_A          234 TIRPTASGNA  243 (264)
T ss_dssp             EEEECC----
T ss_pred             EEecCccccc
Confidence            9999998764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-49  Score=330.46  Aligned_cols=240  Identities=29%  Similarity=0.421  Sum_probs=212.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++   ..++.++++|++|+++++++++++.+.+ 
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   78 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF-   78 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            478999999999999999999999999999999999998887776655   3578899999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.| ++ .|+||++||..+. +.++...|++||++
T Consensus        79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a  155 (263)
T 2a4k_A           79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLG  155 (263)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHH
Confidence            789999999998877788889999999999999999999999999999 55 6899999999988 77788899999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++|+++++.|++++||+||+|+||+++|++.... ...   .........|++|+.+|+|+|+.++||+++..+++||+
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~---~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~  231 (263)
T 2a4k_A          156 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-PPW---AWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ  231 (263)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-CHH---HHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-CHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCC
Confidence            99999999999999999999999999999986653 211   12334456789999999999999999999999999999


Q ss_pred             EEEeCCCccCC
Q 024551          255 VISIDGGYTAG  265 (266)
Q Consensus       255 ~l~vdgG~~~~  265 (266)
                      .+.+|||+++.
T Consensus       232 ~i~vdgG~~~~  242 (263)
T 2a4k_A          232 ALYVDGGRSIV  242 (263)
T ss_dssp             EEEESTTTTTC
T ss_pred             EEEECCCcccc
Confidence            99999998753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-48  Score=325.17  Aligned_cols=245  Identities=29%  Similarity=0.412  Sum_probs=201.0

Q ss_pred             ccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 024551            8 VFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus         8 ~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   87 (266)
                      -...+..++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.   .++.++.+|++|.++++++++
T Consensus         4 ~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~   80 (249)
T 3f9i_A            4 HHHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLIS   80 (249)
T ss_dssp             -----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHH
T ss_pred             CCccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHH
Confidence            34456678899999999999999999999999999999999999999888877763   478899999999999988876


Q ss_pred             HHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh
Q 024551           88 TVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      +.     +++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...
T Consensus        81 ~~-----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  155 (249)
T 3f9i_A           81 KT-----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQAN  155 (249)
T ss_dssp             TC-----SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHH
T ss_pred             hc-----CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCch
Confidence            43     6799999999998877778889999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++||+|+++|+++++.|++++||+|++|+||+++|++.......    .........|.+|+.+|+|+|++++||+++.
T Consensus       156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  231 (249)
T 3f9i_A          156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEK----QREAIVQKIPLGTYGIPEDVAYAVAFLASNN  231 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHH----HHHHHHHHCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHH----HHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence            999999999999999999999999999999999999987654321    2244556689999999999999999999999


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      ..++||+.+.+|||+++
T Consensus       232 ~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          232 ASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             cCCccCcEEEECCCEee
Confidence            99999999999999976

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.9e-48  Score=324.52  Aligned_cols=238  Identities=18%  Similarity=0.163  Sum_probs=200.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+. 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            4678999999999999999999999999999999999999999999999888889999999999999999999999887 


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||+
T Consensus        82 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  160 (252)
T 3h7a_A           82 -APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKF  160 (252)
T ss_dssp             -SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHH
T ss_pred             -CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHH
Confidence             6899999999998888899999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEE-EEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          174 AINQLTKNLACEWATDSIRV-NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v-~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      |+++|+++++.|++++|||| |+|+||+++|++........    ........|.+ +.+|+|+|++++||+++..++++
T Consensus       161 a~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~~  235 (252)
T 3h7a_A          161 GLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQM----FGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAWT  235 (252)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------CCHHHHHHHHHHHHHCCGGGBC
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhh----hhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhcce
Confidence            99999999999999999999 99999999999887643221    12233345666 89999999999999998888999


Q ss_pred             ccEEEe
Q 024551          253 GQVISI  258 (266)
Q Consensus       253 G~~l~v  258 (266)
                      |+....
T Consensus       236 ~~i~~~  241 (252)
T 3h7a_A          236 FEMEIR  241 (252)
T ss_dssp             SEEEEB
T ss_pred             eeEEee
Confidence            987653

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=7.8e-49  Score=328.41  Aligned_cols=237  Identities=21%  Similarity=0.239  Sum_probs=207.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--C-CeeEEEeccCCCHHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--G-FKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +++++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.  + .++.++++|++|+++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999999988764  3 678999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||+...+++ +.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++
T Consensus        83 ~~~-g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  160 (250)
T 3nyw_A           83 QKY-GAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGS  160 (250)
T ss_dssp             HHH-CCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHH
T ss_pred             Hhc-CCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHH
Confidence            999 799999999999877777 778999999999999999999999999999888899999999999987777999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc-CCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL-PAAS  249 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s-~~~~  249 (266)
                      ||+|+++|+++++.|++++|||||+|+||+++|++.....            ...+.+|+.+|+|+|++++||++ +...
T Consensus       161 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~------------~~~~~~~~~~p~dva~~v~~l~s~~~~~  228 (250)
T 3nyw_A          161 TKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG------------TPFKDEEMIQPDDLLNTIRCLLNLSENV  228 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT------------CCSCGGGSBCHHHHHHHHHHHHTSCTTE
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC------------CCcccccCCCHHHHHHHHHHHHcCCCce
Confidence            9999999999999999999999999999999998643221            23466788999999999999999 4566


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      ++++..|.+|||...
T Consensus       229 ~~~~~~i~vd~~~~~  243 (250)
T 3nyw_A          229 CIKDIVFEMKKSIIE  243 (250)
T ss_dssp             ECCEEEEEEHHHHHC
T ss_pred             EeeEEEEEeeccccc
Confidence            888999999998654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.7e-48  Score=339.18  Aligned_cols=241  Identities=24%  Similarity=0.280  Sum_probs=217.5

Q ss_pred             CccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-------HHHHHHHHHhcCCeeEEEeccCCCH
Q 024551            7 PVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-------INERIQEWESKGFKVTGSVCDLSFG   79 (266)
Q Consensus         7 ~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~D~~~~   79 (266)
                      +.+++...+++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++.+.+.++.++++|++|+
T Consensus        34 ~~m~~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~  113 (346)
T 3kvo_A           34 SAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDE  113 (346)
T ss_dssp             --CCCCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCH
T ss_pred             cccCccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCH
Confidence            445677788999999999999999999999999999999999998774       6677888888888999999999999


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA  159 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~  159 (266)
                      ++++++++++.+.+ +++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+.
T Consensus       114 ~~v~~~~~~~~~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~  192 (346)
T 3kvo_A          114 QQISAAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNL  192 (346)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHc
Confidence            99999999999999 78999999999988888999999999999999999999999999999999888999999999988


Q ss_pred             CC--CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCc-ccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccch
Q 024551          160 IS--IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA-VNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEI  236 (266)
Q Consensus       160 ~~--~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei  236 (266)
                      .+  .++...|++||+++++|+++++.|++ +||+||+|+||+ ++|++..            ......+.+|..+|+|+
T Consensus       193 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~------------~~~~~~~~~r~~~pedv  259 (346)
T 3kvo_A          193 NPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMD------------MLGGPGIESQCRKVDII  259 (346)
T ss_dssp             CGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHH------------HHCC--CGGGCBCTHHH
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHH------------hhccccccccCCCHHHH
Confidence            87  78899999999999999999999999 999999999995 8886422            22223467789999999


Q ss_pred             HHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          237 SPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       237 a~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      |++++||+++ ++++||+++ +|||+.
T Consensus       260 A~~v~~L~s~-~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          260 ADAAYSIFQK-PKSFTGNFV-IDENIL  284 (346)
T ss_dssp             HHHHHHHHTS-CTTCCSCEE-EHHHHH
T ss_pred             HHHHHHHHhc-CCCCCceEE-ECCcEe
Confidence            9999999999 899999998 999964

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=4.3e-48  Score=325.83  Aligned_cols=246  Identities=26%  Similarity=0.354  Sum_probs=214.3

Q ss_pred             ccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +++++|+++||||+  +|||++++++|+++|++|++++|+++ .++..+++.+..+.+.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999  99999999999999999999999885 4444555544323478899999999999999999999


Q ss_pred             hcCCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh
Q 024551           92 VFDGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      .+ +++|+||||||....    +++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++...
T Consensus        83 ~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  159 (261)
T 2wyu_A           83 AF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNV  159 (261)
T ss_dssp             HH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHH
T ss_pred             Hc-CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchH
Confidence            98 789999999998754    56778899999999999999999999999999964  489999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++||+++++|+++++.|++++||+||+|+||+++|++......  ............|++|+.+|+|+|++++||+++.
T Consensus       160 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~  237 (261)
T 2wyu_A          160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG--FTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL  237 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTT--HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence            99999999999999999999999999999999999998543211  1111233445679999999999999999999998


Q ss_pred             CCCccccEEEeCCCccCC
Q 024551          248 ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~~  265 (266)
                      ..++||+.+.+|||+++.
T Consensus       238 ~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          238 ASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             GTTCCSCEEEESTTGGGB
T ss_pred             hcCCCCCEEEECCCcccc
Confidence            999999999999998764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.2e-47  Score=323.00  Aligned_cols=237  Identities=30%  Similarity=0.412  Sum_probs=216.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++..   ++.++++|++|+++++++++++.+.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-   79 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF-   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc-
Confidence            47899999999999999999999999999999999999888877776643   48889999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||....+++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++...|++||++
T Consensus        80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  159 (260)
T 1nff_A           80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA  159 (260)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence            78999999999887778888999999999999999999999999999998778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++|+++++.|++++||+||+|+||+++|++.. . ...      .. ...|++|+.+|+|+|+.++||+++...+++|+
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~~------~~-~~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~  230 (260)
T 1nff_A          160 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VPE------DI-FQTALGRAAEPVEVSNLVVYLASDESSYSTGA  230 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SCT------TC-SCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-chh------hH-HhCccCCCCCHHHHHHHHHHHhCccccCCcCC
Confidence            999999999999999999999999999999754 1 111      01 14678899999999999999999989999999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      .+.+|||+++
T Consensus       231 ~~~v~gG~~~  240 (260)
T 1nff_A          231 EFVVDGGTVA  240 (260)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCeec
Confidence            9999999865

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.1e-47  Score=323.96  Aligned_cols=253  Identities=56%  Similarity=0.919  Sum_probs=199.9

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .++.+++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++.+|++|+++++++++++
T Consensus         6 ~~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (266)
T 1xq1_A            6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV   85 (266)
T ss_dssp             -CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHH
Confidence            45667899999999999999999999999999999999999999999888888877778999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      .+.+++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..+.+....|+
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  165 (266)
T 1xq1_A           86 SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS  165 (266)
T ss_dssp             HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHH
T ss_pred             HHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHH
Confidence            98874579999999998877788888999999999999999999999999999887789999999999998888899999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||++++.|+++++.|++++||+|++|+||++.|++.........   ........|++|+.+|+|+|+.++||+++...
T Consensus       166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  242 (266)
T 1xq1_A          166 ATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF---KKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            999999999999999999999999999999999998765331111   12233446788999999999999999998889


Q ss_pred             CccccEEEeCCCccCC
Q 024551          250 YITGQVISIDGGYTAG  265 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~~  265 (266)
                      +++|+.+.+|||+++.
T Consensus       243 ~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          243 YITGQTICVDGGLTVN  258 (266)
T ss_dssp             TCCSCEEECCCCEEET
T ss_pred             CccCcEEEEcCCcccc
Confidence            9999999999998753

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.6e-47  Score=326.29  Aligned_cols=244  Identities=24%  Similarity=0.327  Sum_probs=213.2

Q ss_pred             CCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++||++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+..+.+.++++|++|+++++++++++.+.+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            889999999999  99999999999999999999999885 445555555433347889999999999999999999998


Q ss_pred             CCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           94 DGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                       +++|+||||||+...    +++.+.+.++|++.+++|+.++++++++++|.|+++ .|+||++||..+..+.++...|+
T Consensus        98 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  175 (285)
T 2p91_A           98 -GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMG  175 (285)
T ss_dssp             -SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHH
T ss_pred             -CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHH
Confidence             789999999998754    567788999999999999999999999999999765 58999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+++++|+++++.|++++||+||+|+||+++|++.......  ...........|++|+.+|+|+|++++||+++...
T Consensus       176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~  253 (285)
T 2p91_A          176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF--HLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWAR  253 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH--HHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccc
Confidence            9999999999999999999999999999999999986543211  11123344567899999999999999999999899


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      ++||+.+.+|||+++
T Consensus       254 ~~tG~~~~vdgg~~~  268 (285)
T 2p91_A          254 AITGEVVHVDNGYHI  268 (285)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCCCCEEEECCCccc
Confidence            999999999999875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.2e-47  Score=326.28  Aligned_cols=249  Identities=24%  Similarity=0.333  Sum_probs=216.7

Q ss_pred             CCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH
Q 024551            6 EPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKL   85 (266)
Q Consensus         6 ~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~   85 (266)
                      .|-.|..+++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.++++|++|+++++++
T Consensus        18 gp~~m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~   94 (281)
T 3ppi_A           18 GPGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAA   94 (281)
T ss_dssp             ------CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHH
T ss_pred             CcchhhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHH
Confidence            455555678899999999999999999999999999999999999999998888877   56799999999999999999


Q ss_pred             HHHHHhhcCCcccEEEec-cccccccCC-----CCCCHHHHHHHhccchhhHHHHHHHHHHHHHh------cCCCeEEEE
Q 024551           86 IETVSSVFDGKLNILVNN-AALVVMKRA-----TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA------SGNASIVFM  153 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~------~~~g~iv~v  153 (266)
                      ++++ +.+ +++|++||| +|......+     .+.+.++|++.+++|+.+++++++.++|.|.+      ++.|+||++
T Consensus        95 ~~~~-~~~-~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  172 (281)
T 3ppi_A           95 IEAA-NQL-GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLT  172 (281)
T ss_dssp             HHHH-TTS-SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEE
T ss_pred             HHHH-HHh-CCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEE
Confidence            9999 777 789999999 555444433     36789999999999999999999999999987      457899999


Q ss_pred             ecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-CCCCC
Q 024551          154 SSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAE  232 (266)
Q Consensus       154 ss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  232 (266)
                      ||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++......    ..........|+ +|+.+
T Consensus       173 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~~~~~~  248 (281)
T 3ppi_A          173 ASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGE----EALAKFAANIPFPKRLGT  248 (281)
T ss_dssp             CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCH----HHHHHHHHTCCSSSSCBC
T ss_pred             ecccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccH----HHHHHHHhcCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999987655322    222445566777 89999


Q ss_pred             ccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          233 PNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       233 ~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |+|+|++++||+++  .++||++|.+|||+++.
T Consensus       249 pedvA~~v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          249 PDEFADAAAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHHHcC--CCcCCcEEEECCCcccC
Confidence            99999999999975  79999999999999875

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.7e-48  Score=328.47  Aligned_cols=243  Identities=19%  Similarity=0.185  Sum_probs=209.2

Q ss_pred             cCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEecCChhH-HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGG--TRGIGYAIVEELARFGASVHTCGRDQNM-INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGa--s~giG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +++||+++||||  ++|||++++++|+++|++|++++|+.+. ++++.+++   +.++.++++|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHH
Confidence            478999999999  9999999999999999999999998765 34444332   45788999999999999999999999


Q ss_pred             hcCC---cccEEEecccccc-----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC
Q 024551           92 VFDG---KLNILVNNAALVV-----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP  163 (266)
Q Consensus        92 ~~~~---~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~  163 (266)
                      .+ +   ++|+||||||+..     ..++.+.+.++|++.+++|+.++++++++++|+|+++  |+||++||..+ .+.+
T Consensus        81 ~~-g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~-~~~~  156 (269)
T 2h7i_A           81 AI-GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS-RAMP  156 (269)
T ss_dssp             HH-CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS-SCCT
T ss_pred             Hh-CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc-cccC
Confidence            98 6   8999999999875     4677888999999999999999999999999999653  79999999876 6778


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc----cchhH----HHHHHHHhcCCCC-CCCCcc
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL----NDLLV----QEYVKLIAKTPLA-RSAEPN  234 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~----~~~~~----~~~~~~~~~~~~~-~~~~~~  234 (266)
                      .+..|++||+++++|+++++.|++++|||||+|+||+++|++.....    .....    ..........|++ |+.+||
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~  236 (269)
T 2h7i_A          157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT  236 (269)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHH
Confidence            88999999999999999999999999999999999999998753211    11110    0112234567998 799999


Q ss_pred             chHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          235 EISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       235 eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      |+|++++||+++.++|+||+.|.+|||+++
T Consensus       237 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          237 PVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             HHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHHHhCchhccCcceEEEecCCeee
Confidence            999999999999999999999999999875

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.3e-48  Score=326.40  Aligned_cols=239  Identities=28%  Similarity=0.429  Sum_probs=203.1

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +..+++++|+++||||++|||++++++|+++|++|++++|+++.+++           +..+++|++|+++++++++++.
T Consensus         8 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~   76 (247)
T 1uzm_A            8 GAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVE   76 (247)
T ss_dssp             -CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHH
Confidence            34456899999999999999999999999999999999998764331           1247899999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++
T Consensus        77 ~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (247)
T 1uzm_A           77 EHQ-GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAA  155 (247)
T ss_dssp             HHH-SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHH
Confidence            998 7899999999998777888899999999999999999999999999999887899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||+++++|+++++.|++++||+||+|+||+++|++.... ..   ..........|++|+.+|+|+|+.++||+++..++
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~---~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~  231 (247)
T 1uzm_A          156 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL-DE---RIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASY  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS-CH---HHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc-CH---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            999999999999999999999999999999999875432 11   11133445678899999999999999999998999


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      ++|++|.+|||++++
T Consensus       232 ~~G~~i~vdgG~~~~  246 (247)
T 1uzm_A          232 ISGAVIPVDGGMGMG  246 (247)
T ss_dssp             CCSCEEEESTTTTC-
T ss_pred             CcCCEEEECCCcccC
Confidence            999999999999875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.3e-48  Score=327.59  Aligned_cols=237  Identities=30%  Similarity=0.459  Sum_probs=203.8

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++++|+++||||++|||++++++|+++|++|++++|+++.++           .+.++++|++|+++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEET   84 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999876432           2778899999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||
T Consensus        85 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  163 (253)
T 2nm0_A           85 H-GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASK  163 (253)
T ss_dssp             T-CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            8 789999999998877778888999999999999999999999999999887789999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++|+++++.|++++||+||+|+||+++|++..... ...   ........|++|+.+|+|+|+.++||+++..++++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~---~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~t  239 (253)
T 2nm0_A          164 AGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT-DEQ---RANIVSQVPLGRYARPEEIAATVRFLASDDASYIT  239 (253)
T ss_dssp             HHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------C---HHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC-HHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCc
Confidence            99999999999999999999999999999999865421 111   12334557889999999999999999999999999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      |+.|.+|||++++
T Consensus       240 G~~i~vdGG~~~~  252 (253)
T 2nm0_A          240 GAVIPVDGGLGMG  252 (253)
T ss_dssp             SCEEEESTTTTCC
T ss_pred             CcEEEECCccccC
Confidence            9999999999876

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.1e-47  Score=325.11  Aligned_cols=243  Identities=29%  Similarity=0.408  Sum_probs=210.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++.+.+.++.++++|++|+++++++++++.+.+ 
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF-  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC-
Confidence            368999999999999999999999999999776 889999999999998888899999999999999999999999999 


Q ss_pred             CcccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc---CCCeEEEEecCCCCCCCC-Cchhhh
Q 024551           95 GKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS---GNASIVFMSSVAGAISIP-RLSAYA  169 (266)
Q Consensus        95 ~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~---~~g~iv~vss~~~~~~~~-~~~~y~  169 (266)
                      +++|+||||||+... .++.+.+.++|++.+++|+.+++++++.++|.|.+.   +.|+||++||..+..+.+ .+..|+
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  182 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA  182 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence            789999999998764 678889999999999999999999999999999763   468999999999887766 678899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+++++|+++++.|++++||+|++|+||+++|++.......   ..........|++|+.+|+|+|++++||+++...
T Consensus       183 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~  259 (272)
T 4e3z_A          183 ASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP---DRAREMAPSVPMQRAGMPEEVADAILYLLSPSAS  259 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------------CCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh---HHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccc
Confidence            9999999999999999999999999999999999986653221   1223445667899999999999999999999999


Q ss_pred             CccccEEEeCCCc
Q 024551          250 YITGQVISIDGGY  262 (266)
Q Consensus       250 ~~~G~~l~vdgG~  262 (266)
                      ++||+.|.+|||+
T Consensus       260 ~~tG~~i~vdgG~  272 (272)
T 4e3z_A          260 YVTGSILNVSGGR  272 (272)
T ss_dssp             TCCSCEEEESTTC
T ss_pred             cccCCEEeecCCC
Confidence            9999999999995

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=9.5e-48  Score=326.09  Aligned_cols=244  Identities=21%  Similarity=0.272  Sum_probs=214.3

Q ss_pred             cCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++||+++||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+..+.+.++++|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999986 45555555543335789999999999999999999999


Q ss_pred             cCCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           93 FDGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      + +++|+||||||+...    +++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++...|
T Consensus        82 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  158 (275)
T 2pd4_A           82 L-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVM  158 (275)
T ss_dssp             T-SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred             c-CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhh
Confidence            8 789999999998754    56778899999999999999999999999999975  4899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+++++|+++++.|++++||+||+|+||+++|++......  ............|++|+.+|+|+|+.++||+++..
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~  236 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD--FRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLS  236 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT--HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc--cHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999998654321  11112334456789999999999999999999989


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      .++||+++.+|||+++
T Consensus       237 ~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          237 SGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCCEEEECCCccc
Confidence            9999999999999865

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=7.1e-48  Score=325.18  Aligned_cols=244  Identities=20%  Similarity=0.317  Sum_probs=212.2

Q ss_pred             CCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++|++|||||+  +|||++++++|+++|++|++++|++ ..++..+++.+..+...++++|++|+++++++++++.+.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            789999999999  9999999999999999999999987 4445555554433345789999999999999999999998


Q ss_pred             CCcccEEEeccccccc----cCCCC-CCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           94 DGKLNILVNNAALVVM----KRATE-YTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                       +++|+||||||+...    .++.+ .+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++...|
T Consensus        86 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  162 (265)
T 1qsg_A           86 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM  162 (265)
T ss_dssp             -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHH
T ss_pred             -CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHH
Confidence             789999999998653    55666 899999999999999999999999999964  4799999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+++++|+++++.|++++||+||+|+||+++|++......  ............|++|+.+|+|+|++++||+++..
T Consensus       163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~  240 (265)
T 1qsg_A          163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD--FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLS  240 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT--HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999999999998654221  11112333445789999999999999999999989


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      .++||+.|.+|||+++.
T Consensus       241 ~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          241 AGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             TTCCSCEEEESTTGGGB
T ss_pred             cCccCCEEEECCCcCCC
Confidence            99999999999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-47  Score=324.18  Aligned_cols=254  Identities=27%  Similarity=0.378  Sum_probs=223.6

Q ss_pred             CCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH
Q 024551            6 EPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKL   85 (266)
Q Consensus         6 ~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~   85 (266)
                      ++......+++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++.+|++|+++++++
T Consensus        32 ~~~~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~  111 (285)
T 2c07_A           32 ENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEV  111 (285)
T ss_dssp             ---CCCCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             ccccccccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHH
Confidence            33444455778999999999999999999999999999999999999999988888887777899999999999999999


Q ss_pred             HHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc
Q 024551           86 IETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL  165 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~  165 (266)
                      ++++.+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++.
T Consensus       112 ~~~~~~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  190 (285)
T 2c07_A          112 INKILTEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ  190 (285)
T ss_dssp             HHHHHHHC-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC
T ss_pred             HHHHHHhc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCC
Confidence            99999998 78999999999987778888999999999999999999999999999988777999999999988888999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ..|++||++++.|+++++.|+.++||+|++|+||+++|++..... ..   .........|.+|+.+|+|+|++++||++
T Consensus       191 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~dvA~~~~~l~~  266 (285)
T 2c07_A          191 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS-EQ---IKKNIISNIPAGRMGTPEEVANLACFLSS  266 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC-HH---HHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC-HH---HHHHHHhhCCCCCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999865432 11   11334456788999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccC
Q 024551          246 PAASYITGQVISIDGGYTA  264 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~  264 (266)
                      +...+++|+.+.+|||+++
T Consensus       267 ~~~~~~~G~~i~v~gG~~~  285 (285)
T 2c07_A          267 DKSGYINGRVFVIDGGLSP  285 (285)
T ss_dssp             GGGTTCCSCEEEESTTSCC
T ss_pred             CCcCCCCCCEEEeCCCccC
Confidence            9889999999999999864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-48  Score=323.97  Aligned_cols=241  Identities=26%  Similarity=0.376  Sum_probs=208.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++. ++    .++.++++|++|+++++++    .+.+ 
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~----~~~~-   72 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQF----ANEV-   72 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHHH----HHHC-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHHH----HHHh-
Confidence            478999999999999999999999999999999999987765544 22    2688899999999998844    3445 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-CchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-RLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-~~~~y~~sK~  173 (266)
                      +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.+ +...|++||+
T Consensus        73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~  152 (246)
T 2ag5_A           73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA  152 (246)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHH
Confidence            789999999998877788889999999999999999999999999999887789999999999988887 8899999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      ++++|+++++.|++++||+||+|+||+++|++......  ..............|.+|+.+|+|+|++++||+++.++++
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~  232 (246)
T 2ag5_A          153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYV  232 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999987432111  0011112334456788999999999999999999999999


Q ss_pred             cccEEEeCCCccCC
Q 024551          252 TGQVISIDGGYTAG  265 (266)
Q Consensus       252 ~G~~l~vdgG~~~~  265 (266)
                      ||+.|.+|||++++
T Consensus       233 tG~~i~vdgG~~~~  246 (246)
T 2ag5_A          233 TGNPVIIDGGWSLG  246 (246)
T ss_dssp             CSCEEEECTTGGGC
T ss_pred             CCCEEEECCCccCc
Confidence            99999999999764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.5e-47  Score=323.01  Aligned_cols=238  Identities=30%  Similarity=0.442  Sum_probs=211.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.           +.++.++++|++|+++++++++++.+.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999998764           3578899999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||....+++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        73 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (264)
T 2dtx_A           73 -GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKH  151 (264)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHH
Confidence             7899999999988778888999999999999999999999999999998887899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc------cch-hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL------NDL-LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      ++++|+++++.|++++ |+||+|+||+++|++.....      ... ............|++|+.+|+|+|++++||+++
T Consensus       152 a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~  230 (264)
T 2dtx_A          152 AVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASR  230 (264)
T ss_dssp             HHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999998 99999999999998754311      110 001112334457889999999999999999999


Q ss_pred             CCCCccccEEEeCCCccC
Q 024551          247 AASYITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~  264 (266)
                      ..++++|+.+.+|||+++
T Consensus       231 ~~~~~tG~~i~vdGG~~~  248 (264)
T 2dtx_A          231 EASFITGTCLYVDGGLSI  248 (264)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhcCCCCcEEEECCCccc
Confidence            899999999999999875

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.3e-47  Score=317.38  Aligned_cols=235  Identities=35%  Similarity=0.525  Sum_probs=209.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|+++||||++|||++++++|+++|++|++++|+++.   ..+++   +  +.++++|++| ++++++++++.+.+ +++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~-g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEAL-GGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHH-TSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHc-CCC
Confidence            6899999999999999999999999999999999875   33333   2  7788999999 99999999999988 789


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC--CCchhhhhhHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI--PRLSAYAASKGAI  175 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~--~~~~~y~~sK~al  175 (266)
                      |+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.  ++...|++||+++
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  151 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL  151 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence            99999999887778889999999999999999999999999999998878999999999998877  8899999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccE
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV  255 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~  255 (266)
                      ++|+++++.|++++||+||+|+||+++|++.......  ...........|++|+.+|+|+|+.++||+++..+++||+.
T Consensus       152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~  229 (239)
T 2ekp_A          152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN--PELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQA  229 (239)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC--HHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCE
Confidence            9999999999999999999999999999975432101  11123344567899999999999999999999899999999


Q ss_pred             EEeCCCccC
Q 024551          256 ISIDGGYTA  264 (266)
Q Consensus       256 l~vdgG~~~  264 (266)
                      +.+|||+++
T Consensus       230 ~~vdgG~~~  238 (239)
T 2ekp_A          230 VAVDGGFLA  238 (239)
T ss_dssp             EEESTTTTT
T ss_pred             EEECCCccc
Confidence            999999864

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=8.9e-47  Score=317.97  Aligned_cols=237  Identities=29%  Similarity=0.369  Sum_probs=209.8

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|+++++++++++.+.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCcccEEEecccc-ccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      + +++|+||||||. ...+++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.++...|++|
T Consensus       104 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (262)
T 3rkr_A          104 H-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTAS  182 (262)
T ss_dssp             H-SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHH
T ss_pred             c-CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHH
Confidence            8 789999999998 45667888999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+++++|+++++.|++++||+|++|+||+++|++......            ..+..+..+|+|+|++++||+++...++
T Consensus       183 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------------~~~~~~~~~p~dvA~~v~~l~s~~~~~~  250 (262)
T 3rkr_A          183 KWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA------------KKSALGAIEPDDIADVVALLATQADQSF  250 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------CCCHHHHHHHHHHHHTCCTTCC
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc------------ccccccCCCHHHHHHHHHHHhcCccccc
Confidence            9999999999999999999999999999999998654321            2355678899999999999999999999


Q ss_pred             cccEEEeCCCc
Q 024551          252 TGQVISIDGGY  262 (266)
Q Consensus       252 ~G~~l~vdgG~  262 (266)
                      +|+.+..+.+.
T Consensus       251 ~g~~~i~p~~~  261 (262)
T 3rkr_A          251 ISEVLVRPTLK  261 (262)
T ss_dssp             EEEEEEECCCC
T ss_pred             cCcEEeccccC
Confidence            99999888763

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.5e-46  Score=315.67  Aligned_cols=249  Identities=30%  Similarity=0.494  Sum_probs=223.4

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.+.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999988888888877778999999999999999999999999


Q ss_pred             cCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc--hhhh
Q 024551           93 FDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL--SAYA  169 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~y~  169 (266)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.+++++++++.|.|++++.++||++||..+..+.+..  ..|+
T Consensus        88 ~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~  166 (260)
T 3awd_A           88 E-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN  166 (260)
T ss_dssp             H-SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHH
T ss_pred             c-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccH
Confidence            8 78999999999876 667888899999999999999999999999999988778999999999988877777  8999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      ++|++++.|++.++.|++++||+|++|+||+++|++........  ..........|++++.+|+|+|++++||+++...
T Consensus       167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  244 (260)
T 3awd_A          167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKP--ELYDAWIAGTPMGRVGQPDEVASVVQFLASDAAS  244 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCH--HHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCCh--HHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999865211111  1123344567889999999999999999998889


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      +++|+.+.+|||+++
T Consensus       245 ~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          245 LMTGAIVNVDAGFTV  259 (260)
T ss_dssp             TCCSCEEEESTTTTT
T ss_pred             cCCCcEEEECCceec
Confidence            999999999999864

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=2e-47  Score=318.97  Aligned_cols=233  Identities=30%  Similarity=0.402  Sum_probs=210.3

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccC--CCHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDL--SFGDQREKLIETV   89 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~--~~~~~i~~~~~~~   89 (266)
                      ...++||+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+ .++.++.+|+  +|+++++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999999999999988765 5677777777  9999999999999


Q ss_pred             HhhcCCcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           90 SSVFDGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      .+.+ +++|+||||||+. ...++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.++...|
T Consensus        89 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  167 (247)
T 3i1j_A           89 EHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAY  167 (247)
T ss_dssp             HHHH-SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchh
Confidence            9998 7899999999986 4567888999999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcc-CCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          169 AASKGAINQLTKNLACEWAT-DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~-~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ++||+++++|+++++.|+.+ +|||||+|+||+++|++......            ..+..+..+|+|+|+.++||++++
T Consensus       168 ~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~------------~~~~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          168 GVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYP------------DENPLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHST------------TSCGGGSCCGGGGTHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccc------------ccCccCCCCHHHHHHHHHHHhCch
Confidence            99999999999999999987 89999999999999986432211            122346788999999999999999


Q ss_pred             CCCccccEEEe
Q 024551          248 ASYITGQVISI  258 (266)
Q Consensus       248 ~~~~~G~~l~v  258 (266)
                      ++++||++|.+
T Consensus       236 ~~~itG~~i~~  246 (247)
T 3i1j_A          236 STGINGQALNA  246 (247)
T ss_dssp             GTTCCSCEEEC
T ss_pred             hccccCeeecC
Confidence            99999999986

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=7.4e-47  Score=317.87  Aligned_cols=247  Identities=29%  Similarity=0.448  Sum_probs=222.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++||||++|||++++++|+++|++|++++| +++.++++.+++.+.+.++.++++|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999999 8888888888887777789999999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|++||
T Consensus        84 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (261)
T 1gee_A           84 -GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK  162 (261)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHH
Confidence             7899999999988777788889999999999999999999999999998876 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.|++.++.|++++||+|++|+||+++|++.......  ...........|++++.+|+|+|++++||+++...+++
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  240 (261)
T 1gee_A          163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD--PEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVT  240 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS--HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC--hhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence            9999999999999999999999999999999875432111  11122334456888999999999999999998889999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+++.+|||+++
T Consensus       241 G~~~~v~gg~~~  252 (261)
T 1gee_A          241 GITLFADGGMTL  252 (261)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEEcCCccc
Confidence            999999999875

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=9.4e-47  Score=315.19  Aligned_cols=245  Identities=29%  Similarity=0.420  Sum_probs=219.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH-HhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l-~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++|+++||||++|||++++++|+++|++|++++|+++.++++.+++ .+.+.++.++++|++|+++++++++++.+.+ +
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-G   79 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            3699999999999999999999999999999999999988888877 4445679999999999999999999999998 7


Q ss_pred             cccEEEeccccccccC---CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           96 KLNILVNNAALVVMKR---ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      ++|+||||||.....+   +.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|++||
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHH
Confidence            8999999999876555   7788999999999999999999999999999888789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.|+++++.|+.++||+|++++||++.|++........  ..........|++++.+|+|+|+.++||+++...+++
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  237 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQP--ELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVN  237 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSH--HHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhccc
Confidence            99999999999999999999999999999999865322111  1113344567889999999999999999999889999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.+.+|||+++
T Consensus       238 G~~~~v~gG~~~  249 (250)
T 2cfc_A          238 GAALVMDGAYTA  249 (250)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCceec
Confidence            999999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.9e-46  Score=313.37  Aligned_cols=238  Identities=23%  Similarity=0.327  Sum_probs=211.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.+.+ 
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-   82 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL-   82 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4789999999999999999999999999999999999999999999888777789999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||....+++.+.+.++|++.+++|+.++++++++++|+|.+++ |+||++||..+..+.++...|++||++
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  161 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFG  161 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence            7899999999988777888999999999999999999999999999998877 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCC--CCccchHHHHHHHhcCCCCCcc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARS--AEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++|+++++.|++++||+||+|+||+++|++........ ..   ......| +|+  .+|||+|+.++||+++...+.+
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~---~~~~~~~-~~~~~~~pedvA~~v~~l~s~~~~~~~  236 (247)
T 2jah_A          162 VNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA-TK---EMYEQRI-SQIRKLQAQDIAEAVRYAVTAPHHATV  236 (247)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HH---HHHHHHT-TTSCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh-hH---HHHHhcc-cccCCCCHHHHHHHHHHHhCCCccCcc
Confidence            999999999999999999999999999999865432211 11   1111224 566  8999999999999999888888


Q ss_pred             ccEEEeCC
Q 024551          253 GQVISIDG  260 (266)
Q Consensus       253 G~~l~vdg  260 (266)
                      ++. .+++
T Consensus       237 ~~i-~i~~  243 (247)
T 2jah_A          237 HEI-FIRP  243 (247)
T ss_dssp             EEE-EEEE
T ss_pred             ceE-EecC
Confidence            874 5554

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.6e-47  Score=321.95  Aligned_cols=241  Identities=18%  Similarity=0.248  Sum_probs=212.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++.+|++|||||++|||++++++|+++|++|++++|+.+.+++..      ..++.++++|++|+++++++++++.+.+ 
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   85 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEKIY-   85 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHHHC-
Confidence            478999999999999999999999999999999999987665332      2368899999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||++
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a  165 (266)
T 3p19_A           86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFA  165 (266)
T ss_dssp             CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHH
Confidence            78999999999988888999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++|+++++.|++++|||||+|+||+++|++............+.  ....|++|+.+|+|+|++++||+++...+.+++
T Consensus       166 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~~  243 (266)
T 3p19_A          166 VHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYD--AWRVDMGGVLAADDVARAVLFAYQQPQNVCIRE  243 (266)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHH--HHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHH--hhcccccCCCCHHHHHHHHHHHHcCCCCcccee
Confidence            999999999999999999999999999999876554332222111  113478999999999999999999999999999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      .+....+...
T Consensus       244 i~i~p~~~~~  253 (266)
T 3p19_A          244 IALAPTKQQP  253 (266)
T ss_dssp             EEEEETTCCC
T ss_pred             eEEecCCCCC
Confidence            8887766543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-47  Score=325.80  Aligned_cols=247  Identities=25%  Similarity=0.335  Sum_probs=203.7

Q ss_pred             ccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCe-eEEEeccCCCHHHHHHHH
Q 024551            8 VFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK-VTGSVCDLSFGDQREKLI   86 (266)
Q Consensus         8 ~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~i~~~~   86 (266)
                      ++.....+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.. +.++++|++|++++++++
T Consensus        23 ~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  102 (281)
T 4dry_A           23 MMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALF  102 (281)
T ss_dssp             -----------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             cccccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHH
Confidence            4445566789999999999999999999999999999999999999999999988765444 589999999999999999


Q ss_pred             HHHHhhcCCcccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--CCeEEEEecCCCCCCCC
Q 024551           87 ETVSSVFDGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--NASIVFMSSVAGAISIP  163 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~vss~~~~~~~~  163 (266)
                      +++.+.+ +++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|++++  .|+||++||..+..+.+
T Consensus       103 ~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~  181 (281)
T 4dry_A          103 AAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP  181 (281)
T ss_dssp             HHHHHHH-SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT
T ss_pred             HHHHHHc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC
Confidence            9999999 789999999998754 6788999999999999999999999999999998875  68999999999999999


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHH
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      +...|++||+|+++|+++++.|++++|||||+|+||+++|++.........     ......+.+|+.+|||+|++++||
T Consensus       182 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-----~~~~~~~~~~~~~pedvA~~v~fL  256 (281)
T 4dry_A          182 NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVL-----QANGEVAAEPTIPIEHIAEAVVYM  256 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEE-----CTTSCEEECCCBCHHHHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhh-----hhhhcccccCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998765432211     111234667889999999999999


Q ss_pred             hc-CCCCCccccEEEeCC
Q 024551          244 CL-PAASYITGQVISIDG  260 (266)
Q Consensus       244 ~s-~~~~~~~G~~l~vdg  260 (266)
                      ++ +....+++..+.-..
T Consensus       257 ~s~~~~~~i~~~~i~p~~  274 (281)
T 4dry_A          257 ASLPLSANVLTMTVMATR  274 (281)
T ss_dssp             HHSCTTEEEEEEEEEETT
T ss_pred             hCCCccCccccEEEEecc
Confidence            99 445566666666544

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.8e-47  Score=318.96  Aligned_cols=233  Identities=24%  Similarity=0.258  Sum_probs=205.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEe-c--CChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTC-G--RDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~-~--r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ||+++||||++|||++++++|+++|++|+++ +  |+++.++++.+++  .+       .|+.|+++++++++++.+.+ 
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~-   70 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHG-   70 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGS-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHc-
Confidence            5899999999999999999999999999999 7  9998888777765  22       23337888899999999998 


Q ss_pred             CcccEEEeccccccc---cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           95 GKLNILVNNAALVVM---KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        95 ~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      +++|+||||||....   +++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++|
T Consensus        71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  150 (244)
T 1zmo_A           71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPA  150 (244)
T ss_dssp             SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHH
T ss_pred             CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHH
Confidence            789999999998877   78889999999999999999999999999999998878999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCC---CCCccchhHHHHHHHHh-cCCCCCCCCccchHHHHHHHhcCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQIS---PPDLNDLLVQEYVKLIA-KTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |+++++|+++++.|++++||+||+|+||+++|++.   ......   ........ ..|++|+.+|||+|+.++||+++.
T Consensus       151 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~  227 (244)
T 1zmo_A          151 RAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN---PELRERVDRDVPLGRLGRPDEMGALITFLASRR  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC---HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch---HHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999986   321111   11122333 578999999999999999999999


Q ss_pred             CCCccccEEEeCCCcc
Q 024551          248 ASYITGQVISIDGGYT  263 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~  263 (266)
                      .+++||+.|.+|||++
T Consensus       228 ~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          228 AAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             TGGGTTCEEEESTTCC
T ss_pred             ccCccCCEEEeCCCCC
Confidence            9999999999999975

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-46  Score=323.44  Aligned_cols=262  Identities=30%  Similarity=0.442  Sum_probs=222.5

Q ss_pred             CcccCCCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-----cCCeeEEEecc
Q 024551            1 MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-----KGFKVTGSVCD   75 (266)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~D   75 (266)
                      |+++..+-.......+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++..     .+.++.++++|
T Consensus         1 ~~~~~~~~~~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D   80 (303)
T 1yxm_A            1 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN   80 (303)
T ss_dssp             ------CCCSBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECC
T ss_pred             CccccccCCccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecC
Confidence            6677666555556678999999999999999999999999999999999999999988888876     35689999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEec
Q 024551           76 LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSS  155 (266)
Q Consensus        76 ~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss  155 (266)
                      ++|+++++++++++.+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.+.+++.++||++||
T Consensus        81 ~~~~~~v~~~~~~~~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS  159 (303)
T 1yxm_A           81 IRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV  159 (303)
T ss_dssp             TTCHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC
T ss_pred             CCCHHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence            999999999999999998 7899999999987777788889999999999999999999999999765554689999999


Q ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccc
Q 024551          156 VAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNE  235 (266)
Q Consensus       156 ~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  235 (266)
                      .. ..+.+....|+++|+++++|+++++.|+.++||+|++|+||++.|++....................|.+|+.+|+|
T Consensus       160 ~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  238 (303)
T 1yxm_A          160 PT-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEE  238 (303)
T ss_dssp             CC-TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHH
T ss_pred             ec-ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHH
Confidence            98 77888899999999999999999999999999999999999999985322111100011122334568889999999


Q ss_pred             hHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          236 ISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       236 ia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +|++++||+++...+++|+.+.+|||+++
T Consensus       239 vA~~i~~l~~~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          239 VSSVVCFLLSPAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCcccccCCCcEEEECCCeec
Confidence            99999999999889999999999999865

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=3e-46  Score=317.32  Aligned_cols=246  Identities=28%  Similarity=0.415  Sum_probs=218.4

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++...+.++.++++|++|+++++++++++.+.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999988888777777766778999999999999999999999999


Q ss_pred             cCCcccEEEeccccccc-cCCC-CCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC--CCCchhh
Q 024551           93 FDGKLNILVNNAALVVM-KRAT-EYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS--IPRLSAY  168 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~--~~~~~~y  168 (266)
                      + +++|+||||||.... +++. +.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+  .++...|
T Consensus       109 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  187 (279)
T 3ctm_A          109 F-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPY  187 (279)
T ss_dssp             H-SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHH
T ss_pred             h-CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccH
Confidence            8 789999999998765 6666 788999999999999999999999999998877899999999998887  7888999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||++++.|+++++.|++++| +||+|+||+++|++.... .....   .......|++|+.+|+|+|+.++||+++..
T Consensus       188 ~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~~~~---~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  262 (279)
T 3ctm_A          188 NTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-SKDMK---AKWWQLTPLGREGLTQELVGGYLYLASNAS  262 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-CHHHH---HHHHHHSTTCSCBCGGGTHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-ChHHH---HHHHHhCCccCCcCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999 999999999999987532 22111   223355788999999999999999999988


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      .+++|+.+.+|||+++
T Consensus       263 ~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          263 TFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             TTCCSCEEEESTTCCC
T ss_pred             cCccCCEEEECCCeec
Confidence            9999999999999875

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.6e-46  Score=314.49  Aligned_cols=247  Identities=33%  Similarity=0.497  Sum_probs=218.7

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCee-EEEeccCCCHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV-TGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++   +.++ .++++|++|+++++++++++
T Consensus         4 ~~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~   80 (254)
T 2wsb_A            4 RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEA   80 (254)
T ss_dssp             TTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999999888877776   3356 88999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc--hh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL--SA  167 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~  167 (266)
                      .+ + +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.+..  ..
T Consensus        81 ~~-~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  158 (254)
T 2wsb_A           81 EA-V-APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASS  158 (254)
T ss_dssp             HH-H-SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHH
T ss_pred             Hh-h-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchH
Confidence            88 7 78999999999887778888999999999999999999999999999998878999999999988887777  89


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++||++++.++++++.|+.++||+++.|+||++.|++.......  ...........|.+++.+|+|+|++++||+++.
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  236 (254)
T 2wsb_A          159 YMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER--PELFETWLDMTPMGRCGEPSEIAAAALFLASPA  236 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTC--HHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999875432111  111233445578899999999999999999988


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      ..+++|+.+.+|||++.
T Consensus       237 ~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          237 ASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cccccCCEEEECCCEec
Confidence            89999999999999864

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=9.1e-46  Score=313.85  Aligned_cols=261  Identities=25%  Similarity=0.342  Sum_probs=218.7

Q ss_pred             CcccCCCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 024551            1 MAEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD   80 (266)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~   80 (266)
                      |.+.+.|.  .+.+++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++... .++.++++|++|++
T Consensus         1 m~~~~~~~--~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~   77 (278)
T 2bgk_A            1 MGSTSTPD--SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDE   77 (278)
T ss_dssp             ------------CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHH
T ss_pred             CCCCCCCC--CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC-CceEEEECCCCCHH
Confidence            45555443  4456789999999999999999999999999999999999998887777776432 37899999999999


Q ss_pred             HHHHHHHHHHhhcCCcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC
Q 024551           81 QREKLIETVSSVFDGKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG  158 (266)
Q Consensus        81 ~i~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~  158 (266)
                      +++++++++.+.+ +++|+||||||...  ..++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+
T Consensus        78 ~~~~~~~~~~~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  156 (278)
T 2bgk_A           78 DVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS  156 (278)
T ss_dssp             HHHHHHHHHHHHH-SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccc
Confidence            9999999999998 78999999999764  35678889999999999999999999999999999877899999999999


Q ss_pred             CCCCC-CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-hhHHHHHHHHhcCCCCCCCCccch
Q 024551          159 AISIP-RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-LLVQEYVKLIAKTPLARSAEPNEI  236 (266)
Q Consensus       159 ~~~~~-~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei  236 (266)
                      ..+.+ +...|++||++++.|++.++.|++++||+|++|+||++.|++....... .............+.+++.+|+|+
T Consensus       157 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  236 (278)
T 2bgk_A          157 FTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDV  236 (278)
T ss_dssp             TCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHH
T ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHH
Confidence            88887 7889999999999999999999999999999999999999987654321 111111111223466889999999


Q ss_pred             HHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          237 SPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       237 a~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |++++||+++...+++|+.+.+|||+.+.
T Consensus       237 a~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          237 ADAVAYLAGDESKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHcCcccccCCCCEEEECCccccc
Confidence            99999999988899999999999998754

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=3.1e-46  Score=312.82  Aligned_cols=250  Identities=30%  Similarity=0.461  Sum_probs=224.3

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +..+++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++...+.++.++.+|++|+++++++++++.
T Consensus         4 ~~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999999988888888777789999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||.....++ +.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|++
T Consensus        84 ~~~-~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  161 (255)
T 1fmc_A           84 SKL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_dssp             HHH-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             Hhc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHH
Confidence            998 789999999998766555 678999999999999999999999999998877899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||++++.|++.++.+++++||++++++||++.|++.........   ........|++++.+|+|+|++++|++++...+
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  238 (255)
T 1fmc_A          162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI---EQKMLQHTPIRRLGQPQDIANAALFLCSPAASW  238 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHH---HHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHH---HHHHHhcCCcccCCCHHHHHHHHHHHhCCcccc
Confidence            99999999999999999999999999999999987544322221   133445678899999999999999999988889


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      ++|+.+++|||....
T Consensus       239 ~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          239 VSGQILTVSGGGVQE  253 (255)
T ss_dssp             CCSCEEEESTTSCCC
T ss_pred             CCCcEEEECCceecc
Confidence            999999999998653

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=2.4e-48  Score=337.83  Aligned_cols=246  Identities=20%  Similarity=0.215  Sum_probs=208.0

Q ss_pred             CCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCCh---------hHHHHHHHHHHhc---CCeeEEEeccCCCH--H
Q 024551           17 RGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQ---------NMINERIQEWESK---GFKVTGSVCDLSFG--D   80 (266)
Q Consensus        17 ~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~~---------~~~~~~~~~l~~~---~~~~~~~~~D~~~~--~   80 (266)
                      ++|++|||||++  |||+++|++|+++|++|++++|++         ++++...+.+...   ...+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999777654         2222222222221   23478889999888  7


Q ss_pred             ------------------HHHHHHHHHHhhcCCcccEEEeccccc--cccCCCCCCHHHHHHHhccchhhHHHHHHHHHH
Q 024551           81 ------------------QREKLIETVSSVFDGKLNILVNNAALV--VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHP  140 (266)
Q Consensus        81 ------------------~i~~~~~~~~~~~~~~id~lv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  140 (266)
                                        +++++++++.+.+ +++|+||||||+.  ...++.+.+.++|++++++|+.++++++++++|
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~-g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhc-CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                              9999999999999 7899999999974  467888999999999999999999999999999


Q ss_pred             HHHhcCCCeEEEEecCCCCCCCCCch-hhhhhHHHHHHHHHHHHHHhcc-CCcEEEEEecCcccCCCCCCCccch-----
Q 024551          141 LLKASGNASIVFMSSVAGAISIPRLS-AYAASKGAINQLTKNLACEWAT-DSIRVNAVSPWAVNTQISPPDLNDL-----  213 (266)
Q Consensus       141 ~m~~~~~g~iv~vss~~~~~~~~~~~-~y~~sK~al~~~~~~~a~el~~-~gi~v~~i~PG~v~t~~~~~~~~~~-----  213 (266)
                      +|+++  |+||++||..+..+.+... .|++||+|+++|+++++.|+++ +||+||+|+||+++|++........     
T Consensus       160 ~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  237 (329)
T 3lt0_A          160 IMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             GEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--------
T ss_pred             HHhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccc
Confidence            99875  8999999999999999986 9999999999999999999998 8999999999999998865432100     


Q ss_pred             ----------------------h--------------HHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEE
Q 024551          214 ----------------------L--------------VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS  257 (266)
Q Consensus       214 ----------------------~--------------~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~  257 (266)
                                            .              ...........|++|+.+|+|+|++++||+++.++|+||++|.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~  317 (329)
T 3lt0_A          238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             cccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEE
Confidence                                  0              0012445567899999999999999999999999999999999


Q ss_pred             eCCCccCC
Q 024551          258 IDGGYTAG  265 (266)
Q Consensus       258 vdgG~~~~  265 (266)
                      +|||+++.
T Consensus       318 vdGG~~~~  325 (329)
T 3lt0_A          318 VDNGLNIM  325 (329)
T ss_dssp             ESTTGGGC
T ss_pred             EcCCeeEE
Confidence            99999864

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.3e-46  Score=318.51  Aligned_cols=237  Identities=20%  Similarity=0.233  Sum_probs=191.1

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .++.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.++++|++|+++++++++++.
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   97 (272)
T 4dyv_A           21 QSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATV   97 (272)
T ss_dssp             -------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHH
Confidence            3445678999999999999999999999999999999999999988888877   3678899999999999999999999


Q ss_pred             hhcCCcccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--CCeEEEEecCCCCCCCCCchh
Q 024551           91 SVFDGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--NASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~vss~~~~~~~~~~~~  167 (266)
                      +.+ +++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|++++  .|+||++||..+..+.++...
T Consensus        98 ~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~  176 (272)
T 4dyv_A           98 EKF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAP  176 (272)
T ss_dssp             HHH-SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHH
T ss_pred             HHc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchH
Confidence            999 789999999998754 6788999999999999999999999999999998875  689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++........     .......+.+|+.+|+|+|++++||++..
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~~~pedvA~~v~fL~s~~  251 (272)
T 4dyv_A          177 YTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV-----PQADLSIKVEPVMDVAHVASAVVYMASLP  251 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------CHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc-----hhhhhcccccCCCCHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999999876543221     12223467788999999999999999965


Q ss_pred             CCCccccEE
Q 024551          248 ASYITGQVI  256 (266)
Q Consensus       248 ~~~~~G~~l  256 (266)
                      .....++..
T Consensus       252 ~~~~~~~i~  260 (272)
T 4dyv_A          252 LDANVQFMT  260 (272)
T ss_dssp             TTSCCCEEE
T ss_pred             CcCccceEE
Confidence            554444433

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.1e-47  Score=320.26  Aligned_cols=234  Identities=32%  Similarity=0.383  Sum_probs=205.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~-~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .++|++|||||++|||+++|++|++ .|++|++++|+++.          ....+.++++|++|+++++++++.+.  + 
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~-   68 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--N-   68 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--T-
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--h-
Confidence            4689999999999999999999999 78999999987651          12357899999999999999995554  4 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|.|+++  |+||++||..+..+.++...|++||++
T Consensus        69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa  146 (244)
T 4e4y_A           69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGA  146 (244)
T ss_dssp             CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHH
Confidence            689999999999888889999999999999999999999999999999764  799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-------HHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-------VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +++|+++++.|++++||+||+|+||+++|++.........       ...........|++|+.+|+|+|++++||+++.
T Consensus       147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  226 (244)
T 4e4y_A          147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK  226 (244)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCc
Confidence            9999999999999999999999999999987654322110       112244566789999999999999999999999


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      +.++||+.|.+|||+++
T Consensus       227 ~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          227 SKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cccccCCeEeECCCccC
Confidence            99999999999999985

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-46  Score=314.17  Aligned_cols=249  Identities=33%  Similarity=0.412  Sum_probs=217.9

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+ .+.++.++++|++|+++++++++++
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   86 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   86 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHH
Confidence            445678999999999999999999999999999999999977666666666543 3568999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCC----
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPR----  164 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~----  164 (266)
                      .+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.+.    
T Consensus        87 ~~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~  165 (265)
T 1h5q_A           87 DADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG  165 (265)
T ss_dssp             HHHS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE
T ss_pred             HHhc-CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccc
Confidence            9998 7899999999998777888889999999999999999999999999998765 489999999887765542    


Q ss_pred             ---chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          165 ---LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       165 ---~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                         ...|++||++++.|++.++.|++++||+|++|+||+++|++..... ...   ........|++|+.+|+|+|++++
T Consensus       166 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~---~~~~~~~~~~~~~~~~~dva~~~~  241 (265)
T 1h5q_A          166 SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-KKI---RDHQASNIPLNRFAQPEEMTGQAI  241 (265)
T ss_dssp             ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-HHH---HHHHHHTCTTSSCBCGGGGHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc-hhH---HHHHHhcCcccCCCCHHHHHHHHH
Confidence               7899999999999999999999999999999999999999865431 111   123345678899999999999999


Q ss_pred             HHhcCCCCCccccEEEeCCCccC
Q 024551          242 FLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ||+++..++++|+.+.+|||+++
T Consensus       242 ~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          242 LLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGGG
T ss_pred             hhccCchhcCcCcEEEecCCEeC
Confidence            99999889999999999999875

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.2e-46  Score=313.93  Aligned_cols=246  Identities=30%  Similarity=0.483  Sum_probs=198.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |++++|+++||||++|||++++++|+++|++|+++ .|+++.++++.+++.+.+.++.++++|++|+++++++++++.+.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999998 77888888888888777778999999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.+....|++||
T Consensus        81 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  159 (247)
T 2hq1_A           81 F-GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASK  159 (247)
T ss_dssp             H-SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence            8 789999999998877777788899999999999999999999999999887789999999998888889999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.|+++++.|++.+||+|++++||+++|++.... ...   .........|.+++.+|+|+|++++|++++...+++
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  235 (247)
T 2hq1_A          160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL-PDK---VKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYIT  235 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-CHH---HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc-chH---HHHHHHhhCCCCCCCCHHHHHHHHHHHcCccccccc
Confidence            9999999999999999999999999999999875432 111   112334456888999999999999999998888999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.+++|||+++
T Consensus       236 G~~~~v~gG~~~  247 (247)
T 2hq1_A          236 GQVINIDGGLVM  247 (247)
T ss_dssp             SCEEEESTTC--
T ss_pred             CcEEEeCCCccC
Confidence            999999999864

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=9.5e-47  Score=317.42  Aligned_cols=244  Identities=24%  Similarity=0.287  Sum_probs=203.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh-c
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV-F   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   93 (266)
                      +++||++|||||++|||++++++|+++|++|++++|+++.++++.+++...+.++.++++|++|+++++++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            368999999999999999999999999999999999999999988888777778999999999999999999999886 6


Q ss_pred             CCcccEEEeccc--cc-----cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCch
Q 024551           94 DGKLNILVNNAA--LV-----VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        94 ~~~id~lv~~ag--~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~  166 (266)
                       +++|+||||||  +.     ...++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+. +..
T Consensus        82 -g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~  159 (260)
T 2qq5_A           82 -GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNV  159 (260)
T ss_dssp             -TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSH
T ss_pred             -CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCC
Confidence             78999999995  32     2456778889999999999999999999999999988778999999999887654 468


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHH-hcCCCCCCCCccchHHHHHHHhc
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLI-AKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++................. ...|++|..+|||+|++++||++
T Consensus       160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s  239 (260)
T 2qq5_A          160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999875432211110000000 12456677899999999999999


Q ss_pred             CCC-CCccccEEEeCC
Q 024551          246 PAA-SYITGQVISIDG  260 (266)
Q Consensus       246 ~~~-~~~~G~~l~vdg  260 (266)
                      +.. .|+||++|.+|+
T Consensus       240 ~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          240 DPNILSLSGKVLPSCD  255 (260)
T ss_dssp             CTTGGGGTTCEEEHHH
T ss_pred             Ccccccccceeechhh
Confidence            886 499999999874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.1e-46  Score=315.97  Aligned_cols=234  Identities=23%  Similarity=0.316  Sum_probs=207.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |++|||||++|||++++++|+++|++|++++|+++.++++.+ +...+.++..+     |+++++++++++.+.+ +++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~-g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAY-GQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHH-SCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHh-CCCC
Confidence            789999999999999999999999999999999988877766 66555565544     7778899999999988 7899


Q ss_pred             EEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           99 ILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        99 ~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      +||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..+.++...|++||+++++
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  154 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT  154 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence            999999987 6678888999999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcc---------cCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAV---------NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      |+++++.|++++||+||+|+||++         +|++....  .   ..........|++|+.+|+|+|+.++||+++..
T Consensus       155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~--~---~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~  229 (254)
T 1zmt_A          155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN--P---EHVAHVKKVTALQRLGTQKELGELVAFLASGSC  229 (254)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC--H---HHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC--h---HHHHHHhccCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999         66654321  1   111233445789999999999999999999999


Q ss_pred             CCccccEEEeCCCccC
Q 024551          249 SYITGQVISIDGGYTA  264 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~  264 (266)
                      +++||+++.+|||+++
T Consensus       230 ~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          230 DYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             GGGTTCEEEESTTCCC
T ss_pred             CCccCCEEEECCCchh
Confidence            9999999999999875

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=3.8e-46  Score=311.67  Aligned_cols=245  Identities=32%  Similarity=0.455  Sum_probs=218.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++... .++.++++|++|+++++++++++.+.+ 
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF-   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            478999999999999999999999999999999999998888877777543 578899999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC-CeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++. ++||++||..+..+.++...|++||+
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (251)
T 1zk4_A           81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHH
Confidence            78999999999887778888999999999999999999999999999988766 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhc--cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          174 AINQLTKNLACEWA--TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       174 al~~~~~~~a~el~--~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      +++.|+++++.|+.  ++||+|++|+||+++|++.... .....  ........|++++.+|+|+|++++||+++...++
T Consensus       161 a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  237 (251)
T 1zk4_A          161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGAEE--AMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA  237 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTHHH--HHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cchhh--hHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccc
Confidence            99999999999998  8899999999999999876542 11111  1112344688899999999999999999888999


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      +|+.+.+|||+++
T Consensus       238 ~G~~~~v~gG~~~  250 (251)
T 1zk4_A          238 TGSEFVVDGGYTA  250 (251)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCcEEEECCCccC
Confidence            9999999999875

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-46  Score=310.51  Aligned_cols=226  Identities=19%  Similarity=0.202  Sum_probs=196.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..   ++.++++|++|+++++++++++.+.+ ++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   77 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWG-GL   77 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHH-CS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence            579999999999999999999999999999999999999988888733   68999999999999999999999998 78


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|+||||||....+++.+.+.++|++.+++|+.++++++++++|.|++++ ++||++||..+..+.++...|++||+|++
T Consensus        78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~  156 (235)
T 3l6e_A           78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMR  156 (235)
T ss_dssp             CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHH
Confidence            99999999998888888999999999999999999999999999998765 69999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc-CCCCCccccE
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL-PAASYITGQV  255 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s-~~~~~~~G~~  255 (266)
                      +|+++++.|++++|||||+|+||+++|++......             .+..++.+|||+|+.++|+++ +...+++|..
T Consensus       157 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~  223 (235)
T 3l6e_A          157 GFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-------------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLF  223 (235)
T ss_dssp             HHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------CBCHHHHHHHHHHHTCCCSSEEEEEEE
T ss_pred             HHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-------------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEE
Confidence            99999999999999999999999999998654321             234578999999999999998 7788999987


Q ss_pred             EEeCC
Q 024551          256 ISIDG  260 (266)
Q Consensus       256 l~vdg  260 (266)
                      +.-..
T Consensus       224 ~~~~~  228 (235)
T 3l6e_A          224 IGRNE  228 (235)
T ss_dssp             EEECC
T ss_pred             EecCC
Confidence            76443

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=4.2e-46  Score=310.17  Aligned_cols=242  Identities=29%  Similarity=0.403  Sum_probs=218.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEE-ecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ||+++||||++|||++++++|+++|++|++ .+|+++.++++.+++.+.+.++.++++|++|+++++++++++.+.+ ++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            689999999999999999999999999998 5899998888888887777789999999999999999999999998 78


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|++|||||.....++.+.+.++|++.+++|+.+++++++.+.|+|++++.++||++||..+..+.++...|+++|++++
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence            99999999988777788889999999999999999999999999998877899999999988888899999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh-cCCCCCccccE
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC-LPAASYITGQV  255 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~-s~~~~~~~G~~  255 (266)
                      .|++.++.|+.++||+|++|+||+++|++..... ..   .........|.+|+.+|+|+|++++||+ ++...+++|+.
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~  235 (244)
T 1edo_A          160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKLG-ED---MEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQA  235 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-HH---HHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCE
T ss_pred             HHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC-hH---HHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCE
Confidence            9999999999999999999999999998754421 11   1133445678899999999999999999 77788999999


Q ss_pred             EEeCCCccC
Q 024551          256 ISIDGGYTA  264 (266)
Q Consensus       256 l~vdgG~~~  264 (266)
                      +.+|||+++
T Consensus       236 ~~v~gG~~~  244 (244)
T 1edo_A          236 FTIDGGIAI  244 (244)
T ss_dssp             EEESTTTTC
T ss_pred             EEeCCCccC
Confidence            999999864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=6.1e-47  Score=318.35  Aligned_cols=242  Identities=21%  Similarity=0.219  Sum_probs=209.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHH---CCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELAR---FGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~---~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++++|++|||||++|||++++++|++   +|++|++++|+++.++++.+++.+.  +.++.++++|++|+++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999   8999999999999999998888764  568999999999999999999999


Q ss_pred             Hh--hcCCccc--EEEeccccccc--cCCCC-CCHHHHHHHhccchhhHHHHHHHHHHHHHhc--CCCeEEEEecCCCCC
Q 024551           90 SS--VFDGKLN--ILVNNAALVVM--KRATE-YTLEEYSSVMSTNVESSYHLCQLAHPLLKAS--GNASIVFMSSVAGAI  160 (266)
Q Consensus        90 ~~--~~~~~id--~lv~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g~iv~vss~~~~~  160 (266)
                      .+  .+ +++|  +||||||+...  .++.+ .+.++|++.+++|+.++++++++++|.|+++  +.|+||++||..+..
T Consensus        83 ~~~~~~-g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           83 RELPRP-EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHSCCC-TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             Hhcccc-ccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence            88  55 6788  99999998643  45667 6899999999999999999999999999876  568999999999999


Q ss_pred             CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-hhHHHHHHHHhcCCCCCCCCccchHHH
Q 024551          161 SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-LLVQEYVKLIAKTPLARSAEPNEISPL  239 (266)
Q Consensus       161 ~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~eia~~  239 (266)
                      +.++...|++||+++++|+++++.|+++  ||||+|+||+++|++....... .............|++|+.+|+|+|+.
T Consensus       162 ~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~  239 (259)
T 1oaa_A          162 PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK  239 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHH
Confidence            9999999999999999999999999974  9999999999999875432100 001111223344578899999999999


Q ss_pred             HHHHhcCCCCCccccEEEeCC
Q 024551          240 VAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       240 ~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      ++||+++ .+|+||++|.+||
T Consensus       240 v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          240 LLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHhh-ccccCCcEEeccC
Confidence            9999986 6899999999996

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=5.5e-46  Score=313.11  Aligned_cols=244  Identities=24%  Similarity=0.351  Sum_probs=210.6

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++++|++|+++++++++++.+
T Consensus         6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            446789999999999999999999999999999999999998888777766   45789999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCC------CCCHHHHHHHhccchhhHHHHHHHHHHHHHhc------CCCeEEEEecCCCC
Q 024551           92 VFDGKLNILVNNAALVVMKRAT------EYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS------GNASIVFMSSVAGA  159 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~iv~vss~~~~  159 (266)
                      .+ +++|+||||||.....++.      +.+.++|++.+++|+.+++++++++.|.|+++      +.++||++||..+.
T Consensus        83 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  161 (265)
T 2o23_A           83 KF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF  161 (265)
T ss_dssp             HH-SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             HC-CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhc
Confidence            98 7899999999987655443      37899999999999999999999999999887      67899999999998


Q ss_pred             CCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-CCCCCccchHH
Q 024551          160 ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISP  238 (266)
Q Consensus       160 ~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~eia~  238 (266)
                      .+.++...|++||+++++|++.++.|++++||+|++|+||+++|++..... ...   ........|. +|+.+|+|+|+
T Consensus       162 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~dva~  237 (265)
T 2o23_A          162 EGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP-EKV---CNFLASQVPFPSRLGDPAEYAH  237 (265)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSSSCSCBCHHHHHH
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC-HHH---HHHHHHcCCCcCCCCCHHHHHH
Confidence            888999999999999999999999999999999999999999999865421 111   1223345677 89999999999


Q ss_pred             HHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          239 LVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       239 ~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      .++||++  ..+++|+.|.+|||+++.
T Consensus       238 ~~~~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          238 LVQAIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             HHHHHhh--cCccCceEEEECCCEecC
Confidence            9999995  478999999999998764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.2e-46  Score=309.96  Aligned_cols=221  Identities=26%  Similarity=0.299  Sum_probs=197.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+                    +|++|+++++++++++    
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~----   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI----   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH----
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh----
Confidence            4688999999999999999999999999999999999765                    8999999999998765    


Q ss_pred             CCcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||.. ..+++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..+.++...|++||
T Consensus        58 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK  134 (223)
T 3uce_A           58 -GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAIN  134 (223)
T ss_dssp             -CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHH
Confidence             7899999999987 5678889999999999999999999999999999976  47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++++|+++++.|+++  ||||+|+||+++|++....................|++|+.+|+|+|++++||++  .+++|
T Consensus       135 ~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~t  210 (223)
T 3uce_A          135 AAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYMT  210 (223)
T ss_dssp             HHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTCC
T ss_pred             HHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCCC
Confidence            9999999999999997  9999999999999987765443333334555677899999999999999999997  48999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      |+.|.+|||++++
T Consensus       211 G~~i~vdgG~~~s  223 (223)
T 3uce_A          211 GTVIDVDGGALLG  223 (223)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CcEEEecCCeecC
Confidence            9999999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.5e-45  Score=316.36  Aligned_cols=252  Identities=23%  Similarity=0.352  Sum_probs=220.9

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      +.+..+++||+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+. +.++.++++|++|++++++++++
T Consensus        18 ~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (302)
T 1w6u_A           18 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE   97 (302)
T ss_dssp             CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHH
Confidence            34556789999999999999999999999999999999999999998888888765 67899999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHH-hcCCCeEEEEecCCCCCCCCCchh
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLK-ASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      +.+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|. +++.++||++||..+..+.++...
T Consensus        98 ~~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  176 (302)
T 1w6u_A           98 LIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP  176 (302)
T ss_dssp             HHHHT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHH
T ss_pred             HHHHc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcch
Confidence            99998 7899999999987777788889999999999999999999999999997 445689999999998888899999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCC-CCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQ-ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      |++||++++.|+++++.+++++||+|++|+||++.|+ +..........  ........|.+|+.+|+|+|++++||+++
T Consensus       177 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~dva~~~~~l~~~  254 (302)
T 1w6u_A          177 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF--EKEMIGRIPCGRLGTVEELANLAAFLCSD  254 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH--HHHHHTTCTTSSCBCHHHHHHHHHHHTSG
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhh--HHHHHhcCCcCCCCCHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999997 43322221111  12344567889999999999999999998


Q ss_pred             CCCCccccEEEeCCCccC
Q 024551          247 AASYITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~  264 (266)
                      ...+++|+.+.+|||+.+
T Consensus       255 ~~~~~~G~~~~v~gg~~~  272 (302)
T 1w6u_A          255 YASWINGAVIKFDGGEEV  272 (302)
T ss_dssp             GGTTCCSCEEEESTTHHH
T ss_pred             cccccCCCEEEECCCeee
Confidence            889999999999999753

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=4.3e-46  Score=335.74  Aligned_cols=245  Identities=26%  Similarity=0.307  Sum_probs=210.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ..++||++|||||++|||+++|++|+++|++|++++|+... +++.+...+.  .+.+++||++|+++++++++++.+.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999986432 2233333332  34688999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      ++++|+||||||+...+.+.+.+.++|++.+++|+.+++++++++.|.|.+++.++||++||..+..+.+++..|++||+
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKa  365 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKA  365 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHH
Confidence            44599999999999888899999999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      ++++|+++++.|++++||+||+|+||+++|+|.........    .......+++|..+|+|+|++++||+++.++|+||
T Consensus       366 al~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG  441 (454)
T 3u0b_A          366 GMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR----EVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTG  441 (454)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C----HHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCS
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH----HHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCC
Confidence            99999999999999999999999999999998765322111    22234568889999999999999999999999999


Q ss_pred             cEEEeCCCccCC
Q 024551          254 QVISIDGGYTAG  265 (266)
Q Consensus       254 ~~l~vdgG~~~~  265 (266)
                      ++|.+|||++++
T Consensus       442 ~~i~vdGG~~lG  453 (454)
T 3u0b_A          442 NTIRVCGQAMLG  453 (454)
T ss_dssp             CEEEESSSBSCC
T ss_pred             cEEEECCccccc
Confidence            999999999886

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.2e-45  Score=305.95  Aligned_cols=232  Identities=23%  Similarity=0.260  Sum_probs=210.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHH-hcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE-SKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++. ..+.++.++++|++|+++++++++++.+.+ +
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-G   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-C
Confidence            47999999999999999999999999999999999999999988886 457789999999999999999999999998 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|+||||||....+++.+.+.++|++.+++|+.++++++++++|+|+++ .+++|+++|..+..+.+....|++||+++
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~  158 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIPYGGGYVSTKWAA  158 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcccCCCcchHHHHHHHH
Confidence            89999999999888889999999999999999999999999999999554 58999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccE
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV  255 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~  255 (266)
                      ++|++++  ++..+|||||+|+||+++|++........            +..++.+|+|+|++++||+++..++++|+.
T Consensus       159 ~~~~~~l--~~~~~~i~v~~v~PG~v~T~~~~~~~~~~------------~~~~~~~p~dva~~v~~l~~~~~~~~~~~~  224 (235)
T 3l77_A          159 RALVRTF--QIENPDVRFFELRPGAVDTYFGGSKPGKP------------KEKGYLKPDEIAEAVRCLLKLPKDVRVEEL  224 (235)
T ss_dssp             HHHHHHH--HHHCTTSEEEEEEECSBSSSTTTCCSCCC------------GGGTCBCHHHHHHHHHHHHTSCTTCCCCEE
T ss_pred             HHHHHHH--hhcCCCeEEEEEeCCccccccccccCCcc------------cccCCCCHHHHHHHHHHHHcCCCCCccceE
Confidence            9999999  45577999999999999999877654321            112678999999999999999999999999


Q ss_pred             EEeCCCccC
Q 024551          256 ISIDGGYTA  264 (266)
Q Consensus       256 l~vdgG~~~  264 (266)
                      +..|+|+..
T Consensus       225 ~~~~~~~~~  233 (235)
T 3l77_A          225 MLRSVYQRP  233 (235)
T ss_dssp             EECCTTSCC
T ss_pred             EEeecccCC
Confidence            999999753

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=7.3e-46  Score=312.17  Aligned_cols=246  Identities=27%  Similarity=0.399  Sum_probs=212.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-------CeeEEEeccCCCHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-------FKVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~~~~~i~~~~~   87 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+       .++.++++|++|+++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4689999999999999999999999999999999999998888777765544       578899999999999999999


Q ss_pred             HHHhhcCCcc-cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCc
Q 024551           88 TVSSVFDGKL-NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRL  165 (266)
Q Consensus        88 ~~~~~~~~~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~  165 (266)
                      ++.+.+ +++ |+||||||.....++.+.+.++|++.+++|+.+++++++++.|.|.+++ .|+||++||..+..+.++.
T Consensus        84 ~~~~~~-g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (264)
T 2pd6_A           84 QVQACF-SRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ  162 (264)
T ss_dssp             HHHHHH-SSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTB
T ss_pred             HHHHHh-CCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCC
Confidence            999998 788 9999999988777888889999999999999999999999999998876 6899999999888888999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ..|++||++++.|++.++.|++++||+|++|+||++.|++...... .   .........|.+++.+|+|+|+.++|+++
T Consensus       163 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~  238 (264)
T 2pd6_A          163 TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ-K---VVDKITEMIPMGHLGDPEDVADVVAFLAS  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------CTGGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH-H---HHHHHHHhCCCCCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999998654211 1   11222344678899999999999999999


Q ss_pred             CCCCCccccEEEeCCCccCC
Q 024551          246 PAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +...+++|+.+.+|||+++.
T Consensus       239 ~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          239 EDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             GGGTTCCSCEEEESTTC---
T ss_pred             CcccCCCCCEEEECCCceec
Confidence            88889999999999998763

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.6e-45  Score=307.23  Aligned_cols=245  Identities=31%  Similarity=0.430  Sum_probs=220.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+ .+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999999988888887765 4668999999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|+++|
T Consensus        83 ~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  161 (248)
T 2pnf_A           83 V-DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK  161 (248)
T ss_dssp             S-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence            8 789999999998877778888999999999999999999999999999887789999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.|++.++.|+.++||++++++||+++|++.... ....   ........|.+++.+|+|+|++++|++++...+++
T Consensus       162 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  237 (248)
T 2pnf_A          162 AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL-SEEI---KQKYKEQIPLGRFGSPEEVANVVLFLCSELASYIT  237 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CHHH---HHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc-cHHH---HHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCC
Confidence            9999999999999999999999999999999876532 1111   12334456888999999999999999998888999


Q ss_pred             ccEEEeCCCcc
Q 024551          253 GQVISIDGGYT  263 (266)
Q Consensus       253 G~~l~vdgG~~  263 (266)
                      |+.+.+|||++
T Consensus       238 G~~~~v~gg~~  248 (248)
T 2pnf_A          238 GEVIHVNGGMF  248 (248)
T ss_dssp             SCEEEESTTCC
T ss_pred             CcEEEeCCCcC
Confidence            99999999974

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.5e-46  Score=313.61  Aligned_cols=241  Identities=23%  Similarity=0.314  Sum_probs=202.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++ |++|||||++|||++++++|+++|++|++++|+++.++++.+++... .++.++++|++|+++++++++++.+.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4456 99999999999999999999999999999999999998888887654 578899999999999999999999988


Q ss_pred             CCcccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCC-eEEEEecCCCCCCCCCchhhhhh
Q 024551           94 DGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                       +++|+||||||+... +++.+.+.++|++.+++|+.+++++++.++|.|++++.| +||++||..+..+.++...|++|
T Consensus        96 -g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~as  174 (272)
T 2nwq_A           96 -ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGT  174 (272)
T ss_dssp             -SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHH
Confidence             789999999998753 778889999999999999999999999999999887778 99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+++++|+++++.|++++|||||+|+||+++|++......... ......   .......+|+|+|+.++||+++ ..++
T Consensus       175 Kaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~~~---~~~~~~~~pedvA~~v~~l~s~-~~~~  249 (272)
T 2nwq_A          175 KAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ-ARYDKT---YAGAHPIQPEDIAETIFWIMNQ-PAHL  249 (272)
T ss_dssp             HHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------CCCCBCHHHHHHHHHHHHTS-CTTE
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch-HHHHHh---hccCCCCCHHHHHHHHHHHhCC-CccC
Confidence            9999999999999999999999999999999998653221110 000111   1112357899999999999986 5789


Q ss_pred             cccEEEeCCCc
Q 024551          252 TGQVISIDGGY  262 (266)
Q Consensus       252 ~G~~l~vdgG~  262 (266)
                      +|+.|.+|+|.
T Consensus       250 ~g~~i~v~~~~  260 (272)
T 2nwq_A          250 NINSLEIMPVS  260 (272)
T ss_dssp             EEEEEEEEETT
T ss_pred             ccceEEEeecc
Confidence            99999999885

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=3.4e-45  Score=304.79  Aligned_cols=240  Identities=29%  Similarity=0.415  Sum_probs=210.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.    .+.++++|++|+++++++++    .+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc
Confidence            45889999999999999999999999999999999999988777665542    35567999999999988876    34


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||.....++.+.+.++|++.+++|+.+++++++.+.|.|++++ .++||++||..+..+.++...|++||
T Consensus        75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  153 (244)
T 3d3w_A           75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK  153 (244)
T ss_dssp             -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHH
Confidence             6899999999988777788889999999999999999999999999998876 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.|++.++.|++++||+|++|+||++.|++..........  ........|.+++.+|+|+|++++|++++...+++
T Consensus       154 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (244)
T 3d3w_A          154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK--AKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT  231 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTH--HHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHH--HHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCC
Confidence            9999999999999999999999999999999875432211111  12334567889999999999999999998888999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.+.+|||++.
T Consensus       232 G~~~~v~gG~~~  243 (244)
T 3d3w_A          232 GSTLPVEGGFWA  243 (244)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCCccC
Confidence            999999999875

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2.2e-45  Score=307.97  Aligned_cols=245  Identities=30%  Similarity=0.432  Sum_probs=218.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC-hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++||||++|||++++++|+++|++|++++|+ ++.++++.+++...+.++.++++|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999999 888888888888777889999999999999999999999998


Q ss_pred             CCcccEEEecccc-ccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--C---CeEEEEecCCCCC-CCCCch
Q 024551           94 DGKLNILVNNAAL-VVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--N---ASIVFMSSVAGAI-SIPRLS  166 (266)
Q Consensus        94 ~~~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~---g~iv~vss~~~~~-~~~~~~  166 (266)
                       +++|+||||||. ....++.+.+.++|++.+++|+.+++++++.++|.|.+++  .   ++||++||..+.. +.++..
T Consensus        84 -g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  162 (258)
T 3afn_B           84 -GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAG  162 (258)
T ss_dssp             -SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCH
T ss_pred             -CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCch
Confidence             789999999998 5666788889999999999999999999999999997653  3   8999999998877 788899


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .|++||++++.+++.++.|++++||+|++|+||++.|++..... ..   .........|++++.+|+|+|++++|++++
T Consensus       163 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  238 (258)
T 3afn_B          163 LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT-QD---VRDRISNGIPMGRFGTAEEMAPAFLFFASH  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC-HH---HHHHHHTTCTTCSCBCGGGTHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC-HH---HHHHHhccCCCCcCCCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999999865431 11   113344567889999999999999999987


Q ss_pred             CCC-CccccEEEeCCCccC
Q 024551          247 AAS-YITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~-~~~G~~l~vdgG~~~  264 (266)
                      ... +++|+.+.+|||++.
T Consensus       239 ~~~~~~~G~~~~v~gg~~~  257 (258)
T 3afn_B          239 LASGYITGQVLDINGGQYK  257 (258)
T ss_dssp             HHHTTCCSEEEEESTTSSC
T ss_pred             chhccccCCEEeECCCccC
Confidence            766 899999999999864

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-45  Score=307.45  Aligned_cols=241  Identities=29%  Similarity=0.389  Sum_probs=201.9

Q ss_pred             CCCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH
Q 024551            5 AEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus         5 ~~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~   84 (266)
                      .++...+....++||++|||||++|||++++++|+++|++|++++|+++.++    ++   + .+.++ +|+  .+++++
T Consensus         6 ~~~~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~--~~~~~~   74 (249)
T 1o5i_A            6 IHHHHHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDL--RKDLDL   74 (249)
T ss_dssp             ----------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCT--TTCHHH
T ss_pred             cchhhhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeH--HHHHHH
Confidence            3455566777899999999999999999999999999999999999984332    22   2 56677 999  556777


Q ss_pred             HHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC
Q 024551           85 LIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR  164 (266)
Q Consensus        85 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~  164 (266)
                      +++++     .++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++
T Consensus        75 ~~~~~-----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  149 (249)
T 1o5i_A           75 LFEKV-----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN  149 (249)
T ss_dssp             HHHHS-----CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHh-----cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC
Confidence            77655     3799999999988777888899999999999999999999999999999887899999999999999999


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHH-HHHhcCCCCCCCCccchHHHHHHH
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      ...|++||+++++|+++++.|++++||+||+|+||+++|++..... ...   .. ......|++|+.+|+|+|++++||
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~---~~~~~~~~~p~~~~~~~~dvA~~i~~l  225 (249)
T 1o5i_A          150 LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL-SEE---KKKQVESQIPMRRMAKPEEIASVVAFL  225 (249)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS-CHH---HHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc-hhh---HHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999854321 111   12 344567889999999999999999


Q ss_pred             hcCCCCCccccEEEeCCCccCC
Q 024551          244 CLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      +++...+++|+.+.+|||++..
T Consensus       226 ~s~~~~~~tG~~~~vdgG~~~~  247 (249)
T 1o5i_A          226 CSEKASYLTGQTIVVDGGLSKF  247 (249)
T ss_dssp             HSGGGTTCCSCEEEESTTCCCC
T ss_pred             cCccccCCCCCEEEECCCcccC
Confidence            9998999999999999998753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.5e-45  Score=341.19  Aligned_cols=231  Identities=25%  Similarity=0.412  Sum_probs=202.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||+++||||++|||+++|++|+++|++|++.+|+.  ++++.+++.+.+.++..+.+|++  ++.+++++++.+.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999998642  35666777776778888888884  45678899999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       |++|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..+.++...|++||+
T Consensus       394 -G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa  472 (604)
T 2et6_A          394 -GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA  472 (604)
T ss_dssp             -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence             8999999999998778899999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      |+.+|+++++.|++++|||||+|+||+ +|+|.......             ...+..+|+|+|+.++||+++.+. +||
T Consensus       473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~-------------~~~~~~~pe~vA~~v~~L~s~~~~-itG  537 (604)
T 2et6_A          473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE-------------QDKNLYHADQVAPLLVYLGTDDVP-VTG  537 (604)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------CCSSCGGGTHHHHHHTTSTTCC-CCS
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch-------------hhccCCCHHHHHHHHHHHhCCccC-CCC
Confidence            999999999999999999999999996 99886542211             012456899999999999999888 999


Q ss_pred             cEEEeCCCccC
Q 024551          254 QVISIDGGYTA  264 (266)
Q Consensus       254 ~~l~vdgG~~~  264 (266)
                      ++|.+|||++.
T Consensus       538 ~~~~vdGG~~~  548 (604)
T 2et6_A          538 ETFEIGGGWIG  548 (604)
T ss_dssp             CEEEEETTEEE
T ss_pred             cEEEECCCeeE
Confidence            99999999753

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=9.4e-45  Score=303.28  Aligned_cols=235  Identities=22%  Similarity=0.288  Sum_probs=197.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||++|||++++++|+++|++|++++|+++.++++.+++.   .++.++++|++|+++++++++++.+.+ +++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEW-CNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTT-CCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence            689999999999999999999999999999999998888777763   478899999999999999999999988 7899


Q ss_pred             EEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           99 ILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        99 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      +||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.++...|++||+++++
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  156 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence            9999999863 567788899999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCccc-CCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEE
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVN-TQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI  256 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l  256 (266)
                      |+++++.|++++|||||+|+||+++ |++........ .......   .......+|||+|+.++||+++ .++++|+.+
T Consensus       157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~-~~~~~~~---~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~i  231 (248)
T 3asu_A          157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-DGKAEKT---YQNTVALTPEDVSEAVWWVSTL-PAHVNINTL  231 (248)
T ss_dssp             HHHHHHHHTTTSCCEEEEEEECSBCC--------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEE
T ss_pred             HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCc-hHHHHHH---HhccCCCCHHHHHHHHHHHhcC-CccceeeEE
Confidence            9999999999999999999999999 99854321111 0000110   1112346899999999999986 578999999


Q ss_pred             EeCCCc
Q 024551          257 SIDGGY  262 (266)
Q Consensus       257 ~vdgG~  262 (266)
                      .++++.
T Consensus       232 ~v~~~~  237 (248)
T 3asu_A          232 EMMPVT  237 (248)
T ss_dssp             EECCTT
T ss_pred             EEcccc
Confidence            999873

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1e-44  Score=301.82  Aligned_cols=242  Identities=29%  Similarity=0.421  Sum_probs=217.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEE-EeccCCCHHHHHHHHHHHHhhcCC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTG-SVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~-~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +|+++||||++|||++++++|+++|++|+++ +|+++.++++.+++.+.+.++.+ +.+|++|+++++++++++.+.+ +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-G   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-T
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-C
Confidence            5899999999999999999999999999988 89999998888888777767777 8999999999999999999998 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|++||+++
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL  159 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence            89999999998877778888999999999999999999999999999887789999999998888888999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccE
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV  255 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~  255 (266)
                      +.+++.++.|+.++||+++.|+||+++|++.... ....   ........|.+++.+|+|+|+.+++++++...+++|+.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  235 (245)
T 2ph3_A          160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL-PQEV---KEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQT  235 (245)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-CHHH---HHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc-CHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCE
Confidence            9999999999999999999999999999875432 1111   12334456888999999999999999998888999999


Q ss_pred             EEeCCCccC
Q 024551          256 ISIDGGYTA  264 (266)
Q Consensus       256 l~vdgG~~~  264 (266)
                      +.+|||++-
T Consensus       236 ~~v~gg~~~  244 (245)
T 2ph3_A          236 LCVDGGLTP  244 (245)
T ss_dssp             EEESTTCSC
T ss_pred             EEECCCCCC
Confidence            999999864

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.1e-45  Score=343.43  Aligned_cols=231  Identities=23%  Similarity=0.356  Sum_probs=204.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh---------hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ---------NMINERIQEWESKGFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~   84 (266)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.         +.++++++++.+.+.++.   +|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHH
Confidence            468999999999999999999999999999999998765         677888888877665543   68888888999


Q ss_pred             HHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC
Q 024551           85 LIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR  164 (266)
Q Consensus        85 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~  164 (266)
                      +++++.+.+ |++|+||||||+...+++.+.+.++|++++++|+.++|+++|+++|+|++++.|+||++||.++..+.++
T Consensus        81 ~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~  159 (604)
T 2et6_A           81 IVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG  159 (604)
T ss_dssp             HHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence            999999999 8999999999998778899999999999999999999999999999999888899999999999999999


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      ...|++||+|+.+|+++++.|++++|||||+|+|| ++|+|........       .      .+..+|||+|+.++||+
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~-------~------~~~~~pe~vA~~v~~L~  225 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPP-------M------LEKLGPEKVAPLVLYLS  225 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHH-------H------HTTCSHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCChh-------h------hccCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998 5887643322111       0      02358999999999999


Q ss_pred             cCCCCCccccEEEeCCCcc
Q 024551          245 LPAASYITGQVISIDGGYT  263 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++. +++||++|.+|||+.
T Consensus       226 s~~-~~itG~~~~vdgG~~  243 (604)
T 2et6_A          226 SAE-NELTGQFFEVAAGFY  243 (604)
T ss_dssp             SSS-CCCCSCEEEEETTEE
T ss_pred             CCc-ccCCCCEEEECCCeE
Confidence            998 999999999999975

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=8.8e-45  Score=307.03  Aligned_cols=250  Identities=28%  Similarity=0.395  Sum_probs=219.4

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .+.+++++|+++||||++|||++++++|+++|++|++++| +++.++++.+++.+.+.++.++++|++|+++++++++++
T Consensus        14 ~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   93 (274)
T 1ja9_A           14 DASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKA   93 (274)
T ss_dssp             --CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999 888888888888877778999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAY  168 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y  168 (266)
                      .+.+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|+ ++ ++||++||..+. .+.++...|
T Consensus        94 ~~~~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~iv~~sS~~~~~~~~~~~~~Y  170 (274)
T 1ja9_A           94 VSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-RG-GRIILTSSIAAVMTGIPNHALY  170 (274)
T ss_dssp             HHHH-SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-EE-EEEEEECCGGGTCCSCCSCHHH
T ss_pred             HHHc-CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC-CEEEEEcChHhccCCCCCCchH
Confidence            9998 7899999999988777788889999999999999999999999999997 33 899999999988 778889999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--------chh-HHHHHHHHhcCCCCCCCCccchHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--------DLL-VQEYVKLIAKTPLARSAEPNEISPL  239 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~eia~~  239 (266)
                      +++|++++.|++.++.|++.+||+++.++||++.|++......        ... ...........|.+++.+|+|+|++
T Consensus       171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  250 (274)
T 1ja9_A          171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA  250 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHH
Confidence            9999999999999999999999999999999999987541000        000 1112334456788999999999999


Q ss_pred             HHHHhcCCCCCccccEEEeCCCcc
Q 024551          240 VAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       240 ~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +++|+++...+++|+.+.+|||+.
T Consensus       251 i~~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          251 VSALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHhCcccccccCcEEEecCCcC
Confidence            999999888899999999999974

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=9.1e-46  Score=320.33  Aligned_cols=249  Identities=25%  Similarity=0.279  Sum_probs=169.4

Q ss_pred             ccCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEecCCh-----------hHHH-----------HHHHHHHhcCCe-
Q 024551           14 WSLRGMTALVTGG--TRGIGYAIVEELARFGASVHTCGRDQ-----------NMIN-----------ERIQEWESKGFK-   68 (266)
Q Consensus        14 ~~~~~k~vlItGa--s~giG~aia~~la~~G~~v~~~~r~~-----------~~~~-----------~~~~~l~~~~~~-   68 (266)
                      ++++||++|||||  ++|||+++|++|+++|++|++++|++           +.++           ++++++.+.+.. 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            4588999999999  89999999999999999999998753           2222           233334332211 


Q ss_pred             --eEEEecc------------CCC--------HHHHHHHHHHHHhhcCCcccEEEecccccc--ccCCCCCCHHHHHHHh
Q 024551           69 --VTGSVCD------------LSF--------GDQREKLIETVSSVFDGKLNILVNNAALVV--MKRATEYTLEEYSSVM  124 (266)
Q Consensus        69 --~~~~~~D------------~~~--------~~~i~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~  124 (266)
                        ..++.+|            ++|        +++++++++++.+.+ +++|+||||||+..  ..++.+.+.++|++.+
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHH-SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence              2344433            232        458999999999998 78999999999763  5678889999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc-hhhhhhHHHHHHHHHHHHHHhcc-CCcEEEEEecCccc
Q 024551          125 STNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL-SAYAASKGAINQLTKNLACEWAT-DSIRVNAVSPWAVN  202 (266)
Q Consensus       125 ~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~-~~y~~sK~al~~~~~~~a~el~~-~gi~v~~i~PG~v~  202 (266)
                      ++|+.++++++++++|+|++.  |+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +|||||+|+||+++
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  241 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKEG--GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK  241 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEE--EEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             hHhhHHHHHHHHHHHHHHhcC--ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCcc
Confidence            999999999999999999763  899999999999888887 69999999999999999999985 89999999999999


Q ss_pred             CCCCCCCccch---hHHHH-HHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          203 TQISPPDLNDL---LVQEY-VKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       203 t~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |++........   ..... .......|++|+.+|||+|++++||+++.++|+||++|.+|||+++.
T Consensus       242 T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          242 SRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             -------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             ChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            99865432110   00100 11223468899999999999999999999999999999999998763

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2.9e-45  Score=316.63  Aligned_cols=248  Identities=25%  Similarity=0.299  Sum_probs=199.8

Q ss_pred             ccCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEecCChhH------HH-HHHHHHHhc--CCe---eEEEecc----
Q 024551           14 WSLRGMTALVTGG--TRGIGYAIVEELARFGASVHTCGRDQNM------IN-ERIQEWESK--GFK---VTGSVCD----   75 (266)
Q Consensus        14 ~~~~~k~vlItGa--s~giG~aia~~la~~G~~v~~~~r~~~~------~~-~~~~~l~~~--~~~---~~~~~~D----   75 (266)
                      ++++||++|||||  ++|||+++|++|+++|++|++++|++..      .+ +..+++.+.  +..   +.++.+|    
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            4589999999999  8999999999999999999999986420      10 011112111  111   2344444    


Q ss_pred             --------CC--------CHHHHHHHHHHHHhhcCCcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHH
Q 024551           76 --------LS--------FGDQREKLIETVSSVFDGKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQL  137 (266)
Q Consensus        76 --------~~--------~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  137 (266)
                              ++        |+++++++++++.+.+ +++|+||||||+..  ..++.+.+.++|++.+++|+.++++++++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHH-CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhc-CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                    33        3668999999999998 78999999999763  56778899999999999999999999999


Q ss_pred             HHHHHHhcCCCeEEEEecCCCCCCCCCc-hhhhhhHHHHHHHHHHHHHHhcc-CCcEEEEEecCcccCCCCCCCcc---c
Q 024551          138 AHPLLKASGNASIVFMSSVAGAISIPRL-SAYAASKGAINQLTKNLACEWAT-DSIRVNAVSPWAVNTQISPPDLN---D  212 (266)
Q Consensus       138 ~~~~m~~~~~g~iv~vss~~~~~~~~~~-~~y~~sK~al~~~~~~~a~el~~-~gi~v~~i~PG~v~t~~~~~~~~---~  212 (266)
                      ++|+|++  .|+||++||..+..+.+++ ..|++||+|+++|+++++.|+++ +|||||+|+||+++|++......   .
T Consensus       164 ~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~  241 (315)
T 2o2s_A          164 FGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEK  241 (315)
T ss_dssp             HSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSS
T ss_pred             HHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccc
Confidence            9999976  3899999999999888887 59999999999999999999985 89999999999999987432210   1


Q ss_pred             hhHHH-HHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          213 LLVQE-YVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       213 ~~~~~-~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ....+ ........|++|..+|+|+|+.++||+++.++|+||++|.+|||+++
T Consensus       242 ~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          242 SFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             CHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence            11111 12233457999999999999999999999999999999999999875

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.3e-44  Score=312.93  Aligned_cols=234  Identities=23%  Similarity=0.389  Sum_probs=206.1

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe---------cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTC---------GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQR   82 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~---------~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i   82 (266)
                      +.++++||++|||||++|||++++++|+++|++|+++         +|+.+.+++..+++...+..+   .+|++|.+++
T Consensus         3 ~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~   79 (319)
T 1gz6_A            3 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAG   79 (319)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHH
Confidence            4467899999999999999999999999999999996         557788888888887765543   4899999999


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI  162 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~  162 (266)
                      +++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.
T Consensus        80 ~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~  158 (319)
T 1gz6_A           80 EKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN  158 (319)
T ss_dssp             HHHHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC
Confidence            99999999998 78999999999987777888899999999999999999999999999998878999999999888888


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHH
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      +++..|++||+++++|++.++.|++++||+||+|+||++ |++.........    .         +..+|+|+|++++|
T Consensus       159 ~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~~----~---------~~~~p~dvA~~~~~  224 (319)
T 1gz6_A          159 FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPEDL----V---------EALKPEYVAPLVLW  224 (319)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHHH----H---------HHSCGGGTHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChhh----h---------ccCCHHHHHHHHHH
Confidence            899999999999999999999999999999999999998 876543222110    0         13589999999999


Q ss_pred             HhcCCCCCccccEEEeCCCccC
Q 024551          243 LCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      |+++ ..+++|+++.+|||+..
T Consensus       225 l~s~-~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          225 LCHE-SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             HTST-TCCCCSCEEEEETTEEE
T ss_pred             HhCc-hhhcCCCEEEECCCeEE
Confidence            9987 46899999999999753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-44  Score=296.63  Aligned_cols=234  Identities=23%  Similarity=0.270  Sum_probs=215.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-------eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-------SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-------~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++|+++||||++|||++++++|+++|+       +|++++|+++.++++.+++...+.++.++++|++|+++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            378999999999999999999999999       9999999999999888888777778999999999999999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      .+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|++++.++||++||..+..+.++...|+
T Consensus        81 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  159 (244)
T 2bd0_A           81 VERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC  159 (244)
T ss_dssp             HHHT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhC-CCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhH
Confidence            9998 789999999998877788888999999999999999999999999999887789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCC
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      +||+++++|+++++.|+.++||+|++|+||+++|++........             ..++.+|+|+|+.++|++++...
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------------~~~~~~~~dva~~~~~l~~~~~~  226 (244)
T 2bd0_A          160 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-------------QALMMMPEDIAAPVVQAYLQPSR  226 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-------------GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-------------cccCCCHHHHHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999999876532110             12678999999999999999999


Q ss_pred             CccccEEEeCCCccC
Q 024551          250 YITGQVISIDGGYTA  264 (266)
Q Consensus       250 ~~~G~~l~vdgG~~~  264 (266)
                      +++|+.+..|+|..+
T Consensus       227 ~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          227 TVVEEIILRPTSGDI  241 (244)
T ss_dssp             EEEEEEEEEETTCCC
T ss_pred             ccchheEEecccccc
Confidence            999999999999865

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=2.9e-44  Score=307.84  Aligned_cols=246  Identities=23%  Similarity=0.263  Sum_probs=200.4

Q ss_pred             ccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHH-----------HHHHHHHHhcC--CeeEEEecc---
Q 024551           14 WSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMI-----------NERIQEWESKG--FKVTGSVCD---   75 (266)
Q Consensus        14 ~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~-----------~~~~~~l~~~~--~~~~~~~~D---   75 (266)
                      ++++||++|||||+  +|||+++|++|+++|++|++++|+++..           +++ +++.+..  .....+.+|   
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceec
Confidence            56899999999999  9999999999999999999998764211           111 1111100  012333333   


Q ss_pred             -----CC----C--------HHHHHHHHHHHHhhcCCcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHH
Q 024551           76 -----LS----F--------GDQREKLIETVSSVFDGKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQ  136 (266)
Q Consensus        76 -----~~----~--------~~~i~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~  136 (266)
                           ++    |        +++++++++++.+.+ +++|+||||||+..  ..++.+.+.++|++.+++|+.+++++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                 32    2        678999999999998 78999999999753  5677888999999999999999999999


Q ss_pred             HHHHHHHhcCCCeEEEEecCCCCCCCCCc-hhhhhhHHHHHHHHHHHHHHhcc-CCcEEEEEecCcccCCCCCCCccchh
Q 024551          137 LAHPLLKASGNASIVFMSSVAGAISIPRL-SAYAASKGAINQLTKNLACEWAT-DSIRVNAVSPWAVNTQISPPDLNDLL  214 (266)
Q Consensus       137 ~~~~~m~~~~~g~iv~vss~~~~~~~~~~-~~y~~sK~al~~~~~~~a~el~~-~gi~v~~i~PG~v~t~~~~~~~~~~~  214 (266)
                      +++|+|++  .|+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +|||||+|+||+++|++......  .
T Consensus       162 ~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~--~  237 (297)
T 1d7o_A          162 HFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF--I  237 (297)
T ss_dssp             HHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH--H
T ss_pred             HHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc--c
Confidence            99999975  3899999999999988887 69999999999999999999985 89999999999999998765311  1


Q ss_pred             HHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          215 VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ...........|++|+.+|+|+|+.++||+++.++++||+.|.+|||+++.
T Consensus       238 ~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          238 DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             HHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence            111223344578999999999999999999999999999999999998753

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-44  Score=297.90  Aligned_cols=241  Identities=32%  Similarity=0.425  Sum_probs=209.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++    ..+.++++|++|+++++++++    .+
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc
Confidence            3578999999999999999999999999999999999998877665543    245667999999999998877    34


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||.....++.+.+.++|++.+++|+.+++++++.+.|.|.+++ .++||++||..+..+.++...|++||
T Consensus        75 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  153 (244)
T 1cyd_A           75 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  153 (244)
T ss_dssp             -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHH
Confidence             6899999999988777788889999999999999999999999999998876 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.|++.++.+++.+||++++++||++.|++.........  .........|++++.+|+|+|+++++++++...+++
T Consensus       154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (244)
T 1cyd_A          154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPE--FARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTS  231 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHH--HHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHH--HHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhccc
Confidence            999999999999999999999999999999986442211111  113344457889999999999999999998889999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      |+.+.+|||++.+
T Consensus       232 G~~~~v~gG~~~~  244 (244)
T 1cyd_A          232 GGGILVDAGYLAS  244 (244)
T ss_dssp             SSEEEESTTGGGC
T ss_pred             CCEEEECCCccCC
Confidence            9999999998753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.7e-44  Score=308.66  Aligned_cols=243  Identities=25%  Similarity=0.347  Sum_probs=202.0

Q ss_pred             cCCCccCCcccc-CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 024551            4 AAEPVFGDKKWS-LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQR   82 (266)
Q Consensus         4 ~~~~~~~~~~~~-~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i   82 (266)
                      +.-|..|...|. ++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++++|++|++++
T Consensus        16 ~~~~~~m~~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v   95 (301)
T 3tjr_A           16 TQGPGSMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEM   95 (301)
T ss_dssp             --------CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCccchhHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            445555555444 8999999999999999999999999999999999999999999999988888999999999999999


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCC
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAIS  161 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~  161 (266)
                      +++++++.+.+ +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+
T Consensus        96 ~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  174 (301)
T 3tjr_A           96 VRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP  174 (301)
T ss_dssp             HHHHHHHHHHH-SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhC-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC
Confidence            99999999998 7899999999998888899999999999999999999999999999998876 789999999999999


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHH------HHHHHHhcCCCCCCCCccc
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ------EYVKLIAKTPLARSAEPNE  235 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~e  235 (266)
                      .++...|++||+++++|+++++.|++++||+|++|+||+++|++...........      ............+..+|+|
T Consensus       175 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ped  254 (301)
T 3tjr_A          175 NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADD  254 (301)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHH
Confidence            9999999999999999999999999999999999999999998754321100000      0000111112345679999


Q ss_pred             hHHHHHHHhcCC
Q 024551          236 ISPLVAFLCLPA  247 (266)
Q Consensus       236 ia~~~~~l~s~~  247 (266)
                      +|+.++..+...
T Consensus       255 vA~~i~~~l~~~  266 (301)
T 3tjr_A          255 VARLTADAILAN  266 (301)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcC
Confidence            999999988643

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=7.2e-45  Score=310.79  Aligned_cols=233  Identities=21%  Similarity=0.196  Sum_probs=191.3

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+.++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++|+++++++++++ 
T Consensus         9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~-   84 (291)
T 3rd5_A            9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV-   84 (291)
T ss_dssp             GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC-
T ss_pred             hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc-
Confidence            4566799999999999999999999999999999999999999887776655   568999999999999999998866 


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC---------
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS---------  161 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~---------  161 (266)
                          +++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+    +||++||..+..+         
T Consensus        85 ----~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~  154 (291)
T 3rd5_A           85 ----SGADVLINNAGIMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNW  154 (291)
T ss_dssp             ----CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTC
T ss_pred             ----CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccc
Confidence                579999999998643  355688899999999999999999999999864    8999999988754         


Q ss_pred             ----CCCchhhhhhHHHHHHHHHHHHHHhccCC--cEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCC-cc
Q 024551          162 ----IPRLSAYAASKGAINQLTKNLACEWATDS--IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAE-PN  234 (266)
Q Consensus       162 ----~~~~~~y~~sK~al~~~~~~~a~el~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  234 (266)
                          .++...|++||+++++|++.++.|++++|  |+||+|+||+++|++.......     ........+.++... |+
T Consensus       155 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  229 (291)
T 3rd5_A          155 RSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK-----LGDALMSAATRVVATDAD  229 (291)
T ss_dssp             SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------CHHHH
T ss_pred             cccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH-----HHHHHHHHHHHHHhCCHH
Confidence                34567899999999999999999999888  9999999999999997764221     122233456666666 99


Q ss_pred             chHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          235 EISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       235 eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      |+|++++||+++  .+++|+++.+|||+..
T Consensus       230 ~~A~~~~~l~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          230 FGARQTLYAASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             HHHHHHHHHHHS--CCCTTCEEEETTSSSS
T ss_pred             HHHHHHHHHHcC--CCCCCceeCCcccccC
Confidence            999999999988  4899999999999863

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=6e-44  Score=295.02  Aligned_cols=224  Identities=17%  Similarity=0.186  Sum_probs=190.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++.+|++|+++++++++++.+    ..|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~----~~d   74 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS----IPS   74 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS----CCS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh----cCC
Confidence            68999999999999999999999999999999999888777765   56788999999999999999887654    349


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      ++|||||....+++.+.+.++|++.+++|+.+++++++.++|.|++++ ++||++||..+..+.++...|++||+++++|
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  153 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGL  153 (230)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence            999999998888889999999999999999999999999999998875 4999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc-CCCCCccccEEE
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL-PAASYITGQVIS  257 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s-~~~~~~~G~~l~  257 (266)
                      +++++.|++++||+||+|+||+++|++......            ..+.+++.+|+|+|+.++|+++ +...|+||+.+.
T Consensus       154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~  221 (230)
T 3guy_A          154 IESVRLELKGKPMKIIAVYPGGMATEFWETSGK------------SLDTSSFMSAEDAALMIHGALANIGNGYVSDITVN  221 (230)
T ss_dssp             HHHHHHHTTTSSCEEEEEEECCC----------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEE
T ss_pred             HHHHHHHHHhcCeEEEEEECCcccChHHHhcCC------------CCCcccCCCHHHHHHHHHHHHhCcCCCCccceeec
Confidence            999999999999999999999999998654321            2356789999999999999987 788999999999


Q ss_pred             eCCCc
Q 024551          258 IDGGY  262 (266)
Q Consensus       258 vdgG~  262 (266)
                      .|...
T Consensus       222 ~~~~~  226 (230)
T 3guy_A          222 REGHH  226 (230)
T ss_dssp             C----
T ss_pred             CCCCC
Confidence            88754

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=5.1e-44  Score=333.44  Aligned_cols=237  Identities=27%  Similarity=0.362  Sum_probs=193.5

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC---------ChhHHHHHHHHHHhcCCeeEEEeccCCCH
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR---------DQNMINERIQEWESKGFKVTGSVCDLSFG   79 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~   79 (266)
                      ...+.++++||++|||||++|||+++|++|+++|++|++++|         +.+.++++.+++.+.+..+   .+|++|.
T Consensus        10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~   86 (613)
T 3oml_A           10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSV   86 (613)
T ss_dssp             -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCG
T ss_pred             CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCH
Confidence            345567899999999999999999999999999999999988         7778888888888776554   3799999


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA  159 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~  159 (266)
                      ++++++++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||.++.
T Consensus        87 ~~~~~~~~~~~~~~-g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~  165 (613)
T 3oml_A           87 IDGAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI  165 (613)
T ss_dssp             GGHHHHHC-----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHC-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence            99999999999998 79999999999988888999999999999999999999999999999999888999999999999


Q ss_pred             CCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHH
Q 024551          160 ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL  239 (266)
Q Consensus       160 ~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~  239 (266)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||++ |++.........             .+..+|+|+|++
T Consensus       166 ~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~-------------~~~~~pedvA~~  231 (613)
T 3oml_A          166 YGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDIL-------------FNELKPKLIAPV  231 (613)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHH-------------HTTCCGGGTHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchhh-------------hhcCCHHHHHHH
Confidence            999999999999999999999999999999999999999975 666554433211             134589999999


Q ss_pred             HHHHhcCCCCCccccEEEeCCCccC
Q 024551          240 VAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       240 ~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ++||+++. +++||++|.+|||++.
T Consensus       232 v~~L~s~~-~~~tG~~i~vdGG~~~  255 (613)
T 3oml_A          232 VAYLCHES-CEDNGSYIESAAGWAT  255 (613)
T ss_dssp             HHHTTSTT-CCCCSCEEEEETTEEE
T ss_pred             HHHhcCCC-cCCCceEEEECCCeEE
Confidence            99999998 8999999999999864

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-42  Score=295.70  Aligned_cols=244  Identities=24%  Similarity=0.285  Sum_probs=208.0

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +.++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++.+.+  .++.++++|++|+++++++++++.
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            345899999999999999999999999999999999999999998888887754  578899999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC--CeEEEEecCCCC--CCCCCch
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN--ASIVFMSSVAGA--ISIPRLS  166 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~--g~iv~vss~~~~--~~~~~~~  166 (266)
                      +.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.  ++||++||..+.  .+.++..
T Consensus       107 ~~~-g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (279)
T 1xg5_A          107 SQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTH  185 (279)
T ss_dssp             HHH-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGH
T ss_pred             HhC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCc
Confidence            998 78999999999887778888899999999999999999999999999988763  899999999887  5667788


Q ss_pred             hhhhhHHHHHHHHHHHHHHhc--cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          167 AYAASKGAINQLTKNLACEWA--TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~--~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      .|+++|+++++|++.++.|+.  .+||+|++|+||+++|++......... .   ......+..++.+|+|+|+.++|++
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~---~~~~~~~~~~~~~~~dvA~~i~~l~  261 (279)
T 1xg5_A          186 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP-E---KAAATYEQMKCLKPEDVAEAVIYVL  261 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH-H---HHHHHHC---CBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh-h---HHhhhcccccCCCHHHHHHHHHHHh
Confidence            999999999999999999998  889999999999999987422111111 1   1112234557889999999999999


Q ss_pred             cCCCCCccccEEEeCCC
Q 024551          245 LPAASYITGQVISIDGG  261 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG  261 (266)
                      ++...+.+|+....++|
T Consensus       262 ~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          262 STPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HSCTTEEEEEEEEEETT
T ss_pred             cCCcceEeeeEEEccCC
Confidence            98888888875554443

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.2e-42  Score=295.41  Aligned_cols=238  Identities=24%  Similarity=0.313  Sum_probs=203.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++++|++|+++++++++++.+.+ 
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-   77 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARY-   77 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence            467899999999999999999999999999999999998887766543   5679999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||....+++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.++...|++||++
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (281)
T 3m1a_A           78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAA  157 (281)
T ss_dssp             SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHH
Confidence            78999999999988888889999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc------chh---HHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN------DLL---VQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      +++|+++++.|++++||+|++|+||+++|++..+...      ...   ...........+.+++.+|+|+|+++++++.
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~  237 (281)
T 3m1a_A          158 LEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALD  237 (281)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHh
Confidence            9999999999999999999999999999998654211      111   1112344556788899999999999999997


Q ss_pred             CCCCCccccEEEeC
Q 024551          246 PAASYITGQVISID  259 (266)
Q Consensus       246 ~~~~~~~G~~l~vd  259 (266)
                      +..   .|..+.+.
T Consensus       238 ~~~---~~~~~~l~  248 (281)
T 3m1a_A          238 TEK---TPLRLALG  248 (281)
T ss_dssp             SSS---CCSEEEES
T ss_pred             CCC---CCeEEecC
Confidence            653   34555554

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=9.8e-44  Score=310.23  Aligned_cols=240  Identities=15%  Similarity=0.052  Sum_probs=202.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEecCChhHH------------HHHHHHHHhcCCeeEEEeccCCCHHHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMI------------NERIQEWESKGFKVTGSVCDLSFGDQR   82 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~-~G~~v~~~~r~~~~~------------~~~~~~l~~~~~~~~~~~~D~~~~~~i   82 (266)
                      -.+|++|||||++|||+++|+.|++ +|++|++++|+.+..            +.+.+++.+.+.++..+.+|++|++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4689999999999999999999999 999999998876542            234455666778899999999999999


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccc-------------cccCC---------------------CCCCHHHHHHHhccch
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALV-------------VMKRA---------------------TEYTLEEYSSVMSTNV  128 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~  128 (266)
                      +++++++.+.+ |++|+||||||..             ..+++                     .+.+.++|++.+++|.
T Consensus       125 ~~~v~~i~~~~-G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          125 QLTIDAIKQDL-GQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHT-SCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHc-CCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            99999999999 8999999999974             22344                     6789999999999999


Q ss_pred             hhHH-HHHHHHHHH-HHhcCCCeEEEEecCCCCCCCCCc--hhhhhhHHHHHHHHHHHHHHhccC-CcEEEEEecCcccC
Q 024551          129 ESSY-HLCQLAHPL-LKASGNASIVFMSSVAGAISIPRL--SAYAASKGAINQLTKNLACEWATD-SIRVNAVSPWAVNT  203 (266)
Q Consensus       129 ~~~~-~l~~~~~~~-m~~~~~g~iv~vss~~~~~~~~~~--~~y~~sK~al~~~~~~~a~el~~~-gi~v~~i~PG~v~t  203 (266)
                      .+.| ++++++.+. |.++ .|+||++||..+..+.|.+  ..|++||+++++|+|+++.||+++ |||||+|+||++.|
T Consensus       204 ~~~~~~~~~~~~~~~m~~~-gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T  282 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAE-GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVS  282 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCC
T ss_pred             hhHHHHHHHHHHHHhhhhC-CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcC
Confidence            9999 888887754 5443 5899999999999998887  999999999999999999999999 99999999999999


Q ss_pred             CCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          204 QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ++........   .+.... ..+++|.++|||+++.+.||+++   ++.|+.+.+|++..+
T Consensus       283 ~~s~~ip~~p---~y~~~l-~~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~  336 (405)
T 3zu3_A          283 QASSAIPMMP---LYLSLL-FKVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRL  336 (405)
T ss_dssp             HHHHTSTTHH---HHHHHH-HHHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCE
T ss_pred             chhhcCCCCc---HHHHHH-HHHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCC
Confidence            8765432211   111111 22789999999999999999987   688999999998653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=9.1e-44  Score=313.06  Aligned_cols=242  Identities=17%  Similarity=0.113  Sum_probs=200.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHH-CCCeEEEecCChhHHH------------HHHHHHHhcCCeeEEEeccCCCHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMIN------------ERIQEWESKGFKVTGSVCDLSFGDQRE   83 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~-~G~~v~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~D~~~~~~i~   83 (266)
                      .+|++|||||++|||+++|++|++ +|++|++++|+.+.++            .+.+++.+.+.++..+++|++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            599999999999999999999999 9999999999765433            244666777888999999999999999


Q ss_pred             HHHHHHHhhcCCcccEEEeccccc-------------cccCC---------------------CCCCHHHHHHHhccchh
Q 024551           84 KLIETVSSVFDGKLNILVNNAALV-------------VMKRA---------------------TEYTLEEYSSVMSTNVE  129 (266)
Q Consensus        84 ~~~~~~~~~~~~~id~lv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~  129 (266)
                      ++++++.+.++|++|+||||||..             ..+++                     .+.+.++|++.+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            999999999845899999999972             22333                     36799999999999999


Q ss_pred             hHH-HHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc--hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCC
Q 024551          130 SSY-HLCQLAHPLLKASGNASIVFMSSVAGAISIPRL--SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQIS  206 (266)
Q Consensus       130 ~~~-~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~  206 (266)
                      +.| ++++.+.+.+...+.|+||++||..+..+.|.+  ..|++||+|+.+|+|+++.||+++|||||+|+||+++|++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            998 888887764333335899999999999888876  99999999999999999999999999999999999999987


Q ss_pred             CCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc-ccEEEeCCCcc
Q 024551          207 PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT-GQVISIDGGYT  263 (266)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~-G~~l~vdgG~~  263 (266)
                      .......   .+.. ....|++|.++|||+++.+.||+++.- |.+ |+...+|++..
T Consensus       300 ~~ip~~~---~~~~-~~~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~  352 (422)
T 3s8m_A          300 AAIPVMP---LYIS-MVYKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNR  352 (422)
T ss_dssp             GGSTHHH---HHHH-HHHHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSC
T ss_pred             hcCCCCh---HHHH-HHHhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCC
Confidence            6532211   1111 112378999999999999999999854 665 77666887654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=4.3e-42  Score=284.39  Aligned_cols=228  Identities=26%  Similarity=0.286  Sum_probs=193.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ..+|+++||||++|||++++++|+++|++|++++|+++.++++.+++.    ++.++++|++|+++++++++++.+.+ +
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~   77 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAF-G   77 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHc-C
Confidence            357999999999999999999999999999999999988877766542    67889999999999999999999998 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|+++|+++
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  157 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGL  157 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHH
Confidence            89999999998877778889999999999999999999999999999988789999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccE
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV  255 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~  255 (266)
                      +.++++++.|++++||++++|+||+++|++.....     .   ..       ...+|+|+|+.++|++++...+++|+.
T Consensus       158 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----~---~~-------~~~~~~dvA~~~~~l~~~~~~~~~g~~  222 (234)
T 2ehd_A          158 LGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP-----G---QA-------WKLKPEDVAQAVLFALEMPGHAMVSEI  222 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEECC-------------------------------CCHHHHHHHHHHHHHSCCSSCCCEE
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc-----c---cc-------CCCCHHHHHHHHHHHhCCCcccccceE
Confidence            99999999999999999999999999998765321     0   00       146899999999999999999999998


Q ss_pred             EEeCCCcc
Q 024551          256 ISIDGGYT  263 (266)
Q Consensus       256 l~vdgG~~  263 (266)
                      +..++...
T Consensus       223 ~~~~~~~~  230 (234)
T 2ehd_A          223 ELRPTRPT  230 (234)
T ss_dssp             ECCC----
T ss_pred             EEeecCCC
Confidence            87766543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=5.6e-44  Score=297.24  Aligned_cols=224  Identities=16%  Similarity=0.127  Sum_probs=196.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD-   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   94 (266)
                      .++|+++||||++|||++++++|+++|++|++++|+++..+          ....++++|++|+++++++++++.+.++ 
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999876432          2467889999999999999999999873 


Q ss_pred             CcccEEEeccccccccCC-CCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRA-TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|+||||||....+++ .+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++...|++||+
T Consensus        75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~  152 (241)
T 1dhr_A           75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKG  152 (241)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHH
Confidence            479999999998877777 77889999999999999999999999999965  489999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhc--cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          174 AINQLTKNLACEWA--TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       174 al~~~~~~~a~el~--~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      ++++|+++++.|++  ++||+||+|+||+++|++......            .....+..+|+|+|+.++|++++...++
T Consensus       153 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~------------~~~~~~~~~~~~vA~~v~~l~~~~~~~~  220 (241)
T 1dhr_A          153 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP------------EADFSSWTPLEFLVETFHDWITGNKRPN  220 (241)
T ss_dssp             HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST------------TSCGGGSEEHHHHHHHHHHHHTTTTCCC
T ss_pred             HHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc------------chhhccCCCHHHHHHHHHHHhcCCCcCc
Confidence            99999999999999  899999999999999986432111            0112345678999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 024551          252 TGQVISIDGGYT  263 (266)
Q Consensus       252 ~G~~l~vdgG~~  263 (266)
                      +|+.+.+|||..
T Consensus       221 ~G~~~~v~g~~~  232 (241)
T 1dhr_A          221 SGSLIQVVTTDG  232 (241)
T ss_dssp             TTCEEEEEEETT
T ss_pred             cceEEEEeCCCC
Confidence            999999999864

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-43  Score=295.99  Aligned_cols=237  Identities=24%  Similarity=0.271  Sum_probs=198.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999999999888887777653  4578899999999999999999999998


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC---CCeEEEEecCCCCCCCCCchhhhh
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG---NASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                       +++|+||||||...        .++|++.+++|+.+++.+++.++|.|++++   .|+||++||..+..+.++...|++
T Consensus        85 -g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (267)
T 2gdz_A           85 -GRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  155 (267)
T ss_dssp             -SCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             -CCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH
Confidence             78999999999752        346889999999999999999999997753   589999999999999999999999


Q ss_pred             hHHHHHHHHHHH--HHHhccCCcEEEEEecCcccCCCCCCCccchhHHH----HHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          171 SKGAINQLTKNL--ACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQE----YVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       171 sK~al~~~~~~~--a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      ||+++++|++++  +.|++++|||||+|+||+++|++............    ........+..++.+|+|+|+.++||+
T Consensus       156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~  235 (267)
T 2gdz_A          156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHh
Confidence            999999999995  68999999999999999999987543211110000    001111112234679999999999999


Q ss_pred             cCCCCCccccEEEeCCCcc
Q 024551          245 LPAASYITGQVISIDGGYT  263 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++.  +++|+.+.+|||..
T Consensus       236 s~~--~~~G~~~~v~gg~~  252 (267)
T 2gdz_A          236 EDD--ALNGAIMKITTSKG  252 (267)
T ss_dssp             HCT--TCSSCEEEEETTTE
T ss_pred             cCc--CCCCcEEEecCCCc
Confidence            875  59999999999874

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=3.5e-43  Score=294.25  Aligned_cols=226  Identities=15%  Similarity=0.143  Sum_probs=197.0

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+..+..+|++|||||++|||+++|++|+++|++|++++|+++..+            ...+.+|++|+++++++++++.
T Consensus        15 ~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~   82 (251)
T 3orf_A           15 VPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKIN   82 (251)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHH
T ss_pred             cccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHH
Confidence            4445566899999999999999999999999999999999886432            2357899999999999999999


Q ss_pred             hhcCCcccEEEeccccccccC-CCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKR-ATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      +.+ +++|+||||||+..... +.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..+.++...|+
T Consensus        83 ~~~-g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  159 (251)
T 3orf_A           83 SKS-IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYG  159 (251)
T ss_dssp             TTT-CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHH
T ss_pred             HHc-CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhH
Confidence            998 78999999999876654 677889999999999999999999999999976  47999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhc--cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC-
Q 024551          170 ASKGAINQLTKNLACEWA--TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP-  246 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~--~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~-  246 (266)
                      +||+++++|+++++.|++  ++||+||+|+||+++|++...            .....+.+++.+|+|+|+.++||+++ 
T Consensus       160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~------------~~~~~~~~~~~~~~dva~~i~~l~~~~  227 (251)
T 3orf_A          160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRK------------YMSDANFDDWTPLSEVAEKLFEWSTNS  227 (251)
T ss_dssp             HHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHH------------HCTTSCGGGSBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhh------------hcccccccccCCHHHHHHHHHHHhcCc
Confidence            999999999999999987  899999999999999976322            22234667889999999999999998 


Q ss_pred             CCCCccccEEEeCCCcc
Q 024551          247 AASYITGQVISIDGGYT  263 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~  263 (266)
                      ...++||+.+.+++|..
T Consensus       228 ~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          228 DSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             GGCCCTTCEEEEEEETT
T ss_pred             cccCCcceEEEEecCCc
Confidence            88999999999998754

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.3e-41  Score=294.12  Aligned_cols=233  Identities=21%  Similarity=0.272  Sum_probs=194.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC--eeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF--KVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.  ++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999999999999877655  899999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc------CCCeEEEEecCCCCCCCCCc
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS------GNASIVFMSSVAGAISIPRL  165 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~iv~vss~~~~~~~~~~  165 (266)
                      .+ +++|+||||||+...+++.+.+.++|++.+++|+.+++++++.++|.|.++      +.|+||++||.++..+.++.
T Consensus        84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~  162 (319)
T 3ioy_A           84 RF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP  162 (319)
T ss_dssp             HT-CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS
T ss_pred             hC-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC
Confidence            98 789999999999888889999999999999999999999999999999865      57899999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhH-H-HH----HH-HHhcCCC-CCCCCccchH
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV-Q-EY----VK-LIAKTPL-ARSAEPNEIS  237 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~-~-~~----~~-~~~~~~~-~~~~~~~eia  237 (266)
                      ..|++||+|+++|+++++.|+.++||+|++|+||+|+|++.......... . ..    .. .....+. ....+|+++|
T Consensus       163 ~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA  242 (319)
T 3ioy_A          163 GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIG  242 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHH
Confidence            99999999999999999999999999999999999999987643211100 0 00    00 0000011 1226899999


Q ss_pred             HHHHHHhcCC
Q 024551          238 PLVAFLCLPA  247 (266)
Q Consensus       238 ~~~~~l~s~~  247 (266)
                      +.++..+...
T Consensus       243 ~~~~~al~~~  252 (319)
T 3ioy_A          243 ARVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHcC
Confidence            9999988643

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-43  Score=293.09  Aligned_cols=224  Identities=17%  Similarity=0.172  Sum_probs=195.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD-   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   94 (266)
                      +++|++|||||++|||++++++|+++|++|++++|+++..+          ....++++|++|+++++++++++.+.++ 
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999999999999876532          2467789999999999999999999873 


Q ss_pred             CcccEEEeccccccccCC-CCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRA-TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|+||||||.....++ .+.+.++|++.+++|+.+++++++.++|.|++  .|+||++||..+..+.++...|++||+
T Consensus        71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~  148 (236)
T 1ooe_A           71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKA  148 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHH
Confidence            479999999998776777 77889999999999999999999999999965  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhc--cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHH-HHhcCCCCC
Q 024551          174 AINQLTKNLACEWA--TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA-FLCLPAASY  250 (266)
Q Consensus       174 al~~~~~~~a~el~--~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~-~l~s~~~~~  250 (266)
                      ++++|+++++.|++  ++||+||+|+||+++|++......            .....+..+|+|+|+.++ +|+++...+
T Consensus       149 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~------------~~~~~~~~~~~dvA~~i~~~l~s~~~~~  216 (236)
T 1ooe_A          149 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP------------NADHSSWTPLSFISEHLLKWTTETSSRP  216 (236)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST------------TCCGGGCBCHHHHHHHHHHHHHCGGGCC
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC------------CccccccCCHHHHHHHHHHHHcCCCccc
Confidence            99999999999998  999999999999999986332111            112235568999999998 565888999


Q ss_pred             ccccEEEeCCCcc
Q 024551          251 ITGQVISIDGGYT  263 (266)
Q Consensus       251 ~~G~~l~vdgG~~  263 (266)
                      +||+.+.+|||..
T Consensus       217 ~~G~~~~v~gg~~  229 (236)
T 1ooe_A          217 SSGALLKITTENG  229 (236)
T ss_dssp             CTTCEEEEEEETT
T ss_pred             ccccEEEEecCCC
Confidence            9999999999864

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-42  Score=284.50  Aligned_cols=224  Identities=23%  Similarity=0.266  Sum_probs=193.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++|+++||||++|||++++++|+++|  ++|++++|+.+.++++.+.   .+.++.++++|++|+++++++++++.+.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            368999999999999999999999999  9999999998877654332   25688999999999999999999999988


Q ss_pred             CC--cccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc------C-----CCeEEEEecCCCC
Q 024551           94 DG--KLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS------G-----NASIVFMSSVAGA  159 (266)
Q Consensus        94 ~~--~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~-----~g~iv~vss~~~~  159 (266)
                       +  ++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|+++      +     .++||++||..+.
T Consensus        78 -g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           78 -GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             -GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             -CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence             6  8999999999887 6778888999999999999999999999999999876      5     6899999999888


Q ss_pred             CCC-------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCC
Q 024551          160 ISI-------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAE  232 (266)
Q Consensus       160 ~~~-------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (266)
                      .+.       ++...|++||+++++|+++++.+++++||+|++|+||+++|++....                   +..+
T Consensus       157 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------------~~~~  217 (250)
T 1yo6_A          157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-------------------AALT  217 (250)
T ss_dssp             STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             cCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCC-------------------CCCC
Confidence            776       57889999999999999999999999999999999999999985431                   3468


Q ss_pred             ccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          233 PNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       233 ~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      |+|+|+.+++++++...+++|+++.+|||.
T Consensus       218 ~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          218 VEQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             -HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            999999999999988889999999999985

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=2.4e-42  Score=289.42  Aligned_cols=233  Identities=17%  Similarity=0.200  Sum_probs=192.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCH-HHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFG-DQREKLIETV   89 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~-~~i~~~~~~~   89 (266)
                      |++++|+++||||++|||++++++|+++|++ |++++|+++.  +..+++.+.  +.++.++++|++|+ ++++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            3578999999999999999999999999997 9999998642  222333322  45789999999998 9999999999


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC---CCeEEEEecCCCCCCCCCch
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG---NASIVFMSSVAGAISIPRLS  166 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~~~  166 (266)
                      .+.+ +++|+||||||..        +.++|++.+++|+.++++++++++|.|.+++   .|+||++||..+..+.++..
T Consensus        79 ~~~~-g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  149 (254)
T 1sby_A           79 FDQL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP  149 (254)
T ss_dssp             HHHH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSH
T ss_pred             HHhc-CCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCch
Confidence            9998 7899999999974        3466899999999999999999999997653   58999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-hHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-LVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      .|++||+++++|+++++.++.++||+|++|+||+++|++........ ............|+   .+|||+|+.++++++
T Consensus       150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~dvA~~i~~~~~  226 (254)
T 1sby_A          150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPT---QTSEQCGQNFVKAIE  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCC---EEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCC---CCHHHHHHHHHHHHH
Confidence            99999999999999999999988999999999999998754321100 00011222233343   389999999999995


Q ss_pred             CCCCCccccEEEeCCCcc
Q 024551          246 PAASYITGQVISIDGGYT  263 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~  263 (266)
                         .+.+|+.+.+|||+.
T Consensus       227 ---~~~~G~~~~v~gG~~  241 (254)
T 1sby_A          227 ---ANKNGAIWKLDLGTL  241 (254)
T ss_dssp             ---HCCTTCEEEEETTEE
T ss_pred             ---cCCCCCEEEEeCCce
Confidence               578999999999963

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.3e-42  Score=297.64  Aligned_cols=243  Identities=20%  Similarity=0.229  Sum_probs=193.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC-----hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-----QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      |++++|+++||||++|||++++++|+++|++|++++|+     .+.++++.+.+...+.++.++++|++|++++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            35679999999999999999999999999999986654     6677777777777788999999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-CCCCchh
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-SIPRLSA  167 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-~~~~~~~  167 (266)
                      +.+.+ +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+.. +.++...
T Consensus        81 ~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~  159 (324)
T 3u9l_A           81 IIGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP  159 (324)
T ss_dssp             HHHHH-SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHH
T ss_pred             HHHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchh
Confidence            99999 789999999999888889999999999999999999999999999999988889999999999884 4567889


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC--c-cchh--HH------------HHHHHHhcCCCCCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD--L-NDLL--VQ------------EYVKLIAKTPLARS  230 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~--~-~~~~--~~------------~~~~~~~~~~~~~~  230 (266)
                      |++||+|+++|+++++.|++++||+|++|+||++.|++....  . ....  ..            +....... .....
T Consensus       160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~  238 (324)
T 3u9l_A          160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAA-IVPPD  238 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHH-TSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHH-hcCCC
Confidence            999999999999999999999999999999999997653211  1 1100  00            00011111 11223


Q ss_pred             CCccchHHHHHHHhcCCCCCccccEEEeC
Q 024551          231 AEPNEISPLVAFLCLPAASYITGQVISID  259 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~~~~~~~G~~l~vd  259 (266)
                      .+|+++|+++++++.... ......+.++
T Consensus       239 ~~p~~vA~aiv~~~~~~~-~~~~~~~~~g  266 (324)
T 3u9l_A          239 ADVSLVADAIVRVVGTAS-GKRPFRVHVD  266 (324)
T ss_dssp             CCTHHHHHHHHHHHTSCT-TCCCSEEEEC
T ss_pred             CCHHHHHHHHHHHhcCCC-CCCCeEEEeC
Confidence            688999999999986432 1234556664

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-42  Score=284.51  Aligned_cols=228  Identities=25%  Similarity=0.278  Sum_probs=198.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|+++||||++|||++++++|+++|++|++++|+++ .           .++.++++|++|+++++++++++ +.+ +++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~-~~~   67 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEE-APL   67 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHH-SCE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-Hhh-CCc
Confidence            689999999999999999999999999999999875 1           24578999999999999999999 777 789


Q ss_pred             cEEEeccccccccCCCCC----CHHHHHHHhccchhhHHHHHHHHHHHHHhcC---C---CeEEEEecCCCCCCCCCchh
Q 024551           98 NILVNNAALVVMKRATEY----TLEEYSSVMSTNVESSYHLCQLAHPLLKASG---N---ASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~---g~iv~vss~~~~~~~~~~~~  167 (266)
                      |++|||||.....++.+.    +.++|++.+++|+.+++++++++.|.|.+++   .   ++||++||..+..+.++...
T Consensus        68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  147 (242)
T 1uay_A           68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  147 (242)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence            999999998765555544    4559999999999999999999999998764   3   49999999999888899999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-CCCCCccchHHHHHHHhcC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~eia~~~~~l~s~  246 (266)
                      |++||++++.+++.++.|++++||+|+.|+||+++|++..... ..   .........|+ +++.+|+|+|++++|++++
T Consensus       148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  223 (242)
T 1uay_A          148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP-EK---AKASLAAQVPFPPRLGRPEEYAALVLHILEN  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC-HH---HHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc-hh---HHHHHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999998765422 11   11334455677 8999999999999999987


Q ss_pred             CCCCccccEEEeCCCccCC
Q 024551          247 AASYITGQVISIDGGYTAG  265 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~~  265 (266)
                        .+++|+.+.+|||+++.
T Consensus       224 --~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          224 --PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             --TTCCSCEEEESTTCCCC
T ss_pred             --CCCCCcEEEEcCCeecC
Confidence              78999999999999864

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-41  Score=286.38  Aligned_cols=223  Identities=25%  Similarity=0.301  Sum_probs=201.0

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+.+++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++++|++|+++++++++++.
T Consensus        24 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           24 KRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             -CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            34677999999999999999999999999999999999999999999888888777789999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|++
T Consensus       104 ~~~-g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  182 (272)
T 1yb1_A          104 AEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCS  182 (272)
T ss_dssp             HHT-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHH
T ss_pred             HHC-CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHH
Confidence            998 7899999999988777788888999999999999999999999999999887899999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHhc---cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          171 SKGAINQLTKNLACEWA---TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       171 sK~al~~~~~~~a~el~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      ||++++.|+++++.|+.   ++||+|++|+||+++|++....     .         .+.++..+|+|+|+.+++++.+.
T Consensus       183 sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-----~---------~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          183 SKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-----S---------TSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-----H---------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-----c---------ccccCCCCHHHHHHHHHHHHHcC
Confidence            99999999999999997   6799999999999999985421     0         12357789999999999999754


Q ss_pred             C
Q 024551          248 A  248 (266)
Q Consensus       248 ~  248 (266)
                      .
T Consensus       249 ~  249 (272)
T 1yb1_A          249 Q  249 (272)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-41  Score=283.30  Aligned_cols=233  Identities=24%  Similarity=0.280  Sum_probs=202.0

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCC---CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFG---ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKL   85 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G---~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~   85 (266)
                      ......++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+ +++.+.+.++.++.+|++|+++++++
T Consensus        12 ~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~   90 (267)
T 1sny_A           12 SGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKL   90 (267)
T ss_dssp             --------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHH
T ss_pred             ccccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHH
Confidence            3445567899999999999999999999999999   9999999998766544 44444466899999999999999999


Q ss_pred             HHHHHhhcCC--cccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc------C-----CCeEE
Q 024551           86 IETVSSVFDG--KLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS------G-----NASIV  151 (266)
Q Consensus        86 ~~~~~~~~~~--~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~-----~g~iv  151 (266)
                      ++++.+.+ +  ++|+||||||... ..++.+.+.++|++.+++|+.+++++++.++|.|.++      +     .++||
T Consensus        91 ~~~~~~~~-g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv  169 (267)
T 1sny_A           91 VADIEGVT-KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAII  169 (267)
T ss_dssp             HHHHHHHH-GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEE
T ss_pred             HHHHHHhc-CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEE
Confidence            99999988 5  7999999999876 6778888999999999999999999999999999876      3     58999


Q ss_pred             EEecCCCCCCCC---CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCC
Q 024551          152 FMSSVAGAISIP---RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA  228 (266)
Q Consensus       152 ~vss~~~~~~~~---~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  228 (266)
                      ++||..+..+.+   +...|++||+++++|++.++.|+.++||+|++|+||+++|++....                   
T Consensus       170 ~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------------  230 (267)
T 1sny_A          170 NMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS-------------------  230 (267)
T ss_dssp             EECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT-------------------
T ss_pred             EEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCC-------------------
Confidence            999998877653   6788999999999999999999999999999999999999986431                   


Q ss_pred             CCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          229 RSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      +..+|+++|+.+++++++...+++|+++.+||+.
T Consensus       231 ~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          231 APLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             CSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             CCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            3468999999999999988889999999999986

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.6e-42  Score=290.83  Aligned_cols=219  Identities=28%  Similarity=0.345  Sum_probs=176.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |++|||||++|||++++++|+++|++|++++|+++.++.            . +++|++|++++++++++.   + +++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~---~-~~id   64 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC---S-KGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC---T-TCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh---C-CCCC
Confidence            689999999999999999999999999999998764321            1 679999999999888743   2 6899


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-------------------
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-------------------  159 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-------------------  159 (266)
                      +||||||.....       +.|++.+++|+.++++++++++|.|++++.|+||++||..+.                   
T Consensus        65 ~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            999999976411       128999999999999999999999998878999999999887                   


Q ss_pred             ---------CCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh--cCCCC
Q 024551          160 ---------ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA--KTPLA  228 (266)
Q Consensus       160 ---------~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~  228 (266)
                               .+.++...|++||++++.|++.++.|++++||+||+|+||+++|++...........   ....  ..|++
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~  214 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYG---ESIAKFVPPMG  214 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------CCCSTT
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHH---HHHHhcccccC
Confidence                     344567899999999999999999999999999999999999999876532211111   1111  46888


Q ss_pred             CCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          229 RSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      |+.+|+|+|++++||+++..+++||+.+.+|||+++
T Consensus       215 ~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            999999999999999998888999999999999753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.6e-41  Score=283.03  Aligned_cols=225  Identities=26%  Similarity=0.282  Sum_probs=162.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++++|++|||||++|||+++|++|++ |++|++++|+++.++++.+     ..++.++.+|+++.++ .+.+.+..+.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~   73 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL   73 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc
Confidence            467899999999999999999999988 9999999999988776554     2368889999998877 44555555666


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++ |+||++||..+..+.++...|++||+
T Consensus        74 -~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~  151 (245)
T 3e9n_A           74 -DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKH  151 (245)
T ss_dssp             -SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHH
T ss_pred             -CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHH
Confidence             7899999999998888888899999999999999999999999999998765 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      ++++|+++++.|++++||+||+|+||+++|++........        ....+.+++.+|+|+|++++||++...   ++
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--------~~~~~~~~~~~p~dvA~~i~~l~~~~~---~~  220 (245)
T 3e9n_A          152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ--------GTNFRPEIYIEPKEIANAIRFVIDAGE---TT  220 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------CCGGGSCHHHHHHHHHHHHTSCT---TE
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh--------hcccccccCCCHHHHHHHHHHHHcCCC---cc
Confidence            9999999999999999999999999999999876543221        123456788999999999999997554   34


Q ss_pred             cEEEe
Q 024551          254 QVISI  258 (266)
Q Consensus       254 ~~l~v  258 (266)
                      +...+
T Consensus       221 ~~~~i  225 (245)
T 3e9n_A          221 QITNV  225 (245)
T ss_dssp             EEEEE
T ss_pred             ceeee
Confidence            44444

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2.5e-41  Score=293.33  Aligned_cols=237  Identities=20%  Similarity=0.250  Sum_probs=189.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh------cCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES------KGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ++|+++||||++|||++++++|+++|++|++++|+...+++..+.+..      .+.++.++++|++|+++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            479999999999999999999999999988887765444333333322      24678999999999999999999883


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                        + +++|+||||||+...+++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.+....|++
T Consensus        81 --~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a  157 (327)
T 1jtv_A           81 --E-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (327)
T ss_dssp             --T-SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --c-CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHH
Confidence              3 7899999999988777888899999999999999999999999999998877899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch----------hHHHHHHHHh--cCCCCCC-CCccchH
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL----------LVQEYVKLIA--KTPLARS-AEPNEIS  237 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~----------~~~~~~~~~~--~~~~~~~-~~~~eia  237 (266)
                      ||+++++|+++++.|++++||+||+|+||+++|++........          ....+.....  ..+++|. .+|+|+|
T Consensus       158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA  237 (327)
T 1jtv_A          158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (327)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHH
Confidence            9999999999999999999999999999999999876532211          0000011110  1123344 4899999


Q ss_pred             HHHHHHhcC---CCCCccccEE
Q 024551          238 PLVAFLCLP---AASYITGQVI  256 (266)
Q Consensus       238 ~~~~~l~s~---~~~~~~G~~l  256 (266)
                      +.++|++++   ...|++|+.+
T Consensus       238 ~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          238 EVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHcCCCCCeEEEeCchH
Confidence            999999974   4568888754

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=6.4e-40  Score=281.80  Aligned_cols=220  Identities=26%  Similarity=0.302  Sum_probs=190.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCH-HHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFG-DQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~-~~i~~~~~~~~~~   92 (266)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+ .++.++++|++|+ ++++++++++.+.
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999999999999987764 4799999999998 9999999999999


Q ss_pred             cCCcccEEEeccccccc------------------------------cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHH
Q 024551           93 FDGKLNILVNNAALVVM------------------------------KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLL  142 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m  142 (266)
                      + +++|+||||||+...                              .++.+.+.++|++.+++|+.+++++++.++|+|
T Consensus        89 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           89 F-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             H-SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             C-CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence            8 789999999998632                              245567899999999999999999999999999


Q ss_pred             HhcCCCeEEEEecCCCCCCC-------------------------------------------CCchhhhhhHHHHHHHH
Q 024551          143 KASGNASIVFMSSVAGAISI-------------------------------------------PRLSAYAASKGAINQLT  179 (266)
Q Consensus       143 ~~~~~g~iv~vss~~~~~~~-------------------------------------------~~~~~y~~sK~al~~~~  179 (266)
                      ++++.|+||++||..+..+.                                           ++...|++||+++++|+
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence            98888999999999887543                                           45678999999999999


Q ss_pred             HHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEE
Q 024551          180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI  256 (266)
Q Consensus       180 ~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l  256 (266)
                      ++++.++.+  |+||+|+||+|+|++.....                   ..++++.++.+++++.......+|..+
T Consensus       248 ~~la~e~~~--i~v~~v~PG~v~T~~~~~~~-------------------~~~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          248 RVLANKIPK--FQVNCVCPGLVKTEMNYGIG-------------------NYTAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHCTT--SEEEEECCCSBCSGGGTTCC-------------------SBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             HHHHhhcCC--ceEEEecCCceecCCcCCCC-------------------CCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence            999999864  99999999999999865432                   247899999999988755555566554

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=7.8e-41  Score=296.49  Aligned_cols=241  Identities=14%  Similarity=0.076  Sum_probs=201.2

Q ss_pred             CCCCEEEEecCCCchHHH--HHHHHHHCCCeEEEecCChhH------------HHHHHHHHHhcCCeeEEEeccCCCHHH
Q 024551           16 LRGMTALVTGGTRGIGYA--IVEELARFGASVHTCGRDQNM------------INERIQEWESKGFKVTGSVCDLSFGDQ   81 (266)
Q Consensus        16 ~~~k~vlItGas~giG~a--ia~~la~~G~~v~~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~D~~~~~~   81 (266)
                      ..||++|||||++|||++  ++++|+++|++|++++|+.+.            .+.+.+.+.+.+.++.++++|++|+++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            679999999999999999  999999999999999986543            345555566667889999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEeccccc-------------cccCC---------------------CCCCHHHHHHHhccc
Q 024551           82 REKLIETVSSVFDGKLNILVNNAALV-------------VMKRA---------------------TEYTLEEYSSVMSTN  127 (266)
Q Consensus        82 i~~~~~~~~~~~~~~id~lv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n  127 (266)
                      ++++++++.+.+ |++|+||||||..             ..+++                     .+.+.++|++.+++|
T Consensus       138 v~~~v~~i~~~~-G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          138 KDKVIKYIKDEF-GKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            999999999998 8999999999974             22233                     457999999999999


Q ss_pred             hhhHH-HHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc--hhhhhhHHHHHHHHHHHHHHhcc-CCcEEEEEecCcccC
Q 024551          128 VESSY-HLCQLAHPLLKASGNASIVFMSSVAGAISIPRL--SAYAASKGAINQLTKNLACEWAT-DSIRVNAVSPWAVNT  203 (266)
Q Consensus       128 ~~~~~-~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~y~~sK~al~~~~~~~a~el~~-~gi~v~~i~PG~v~t  203 (266)
                      ..+.| ++++.+.+.+...+.|+||++||.++..+.|.+  ..|++||+|+++|+|+++.||++ +|||||+|+||+++|
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T  296 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT  296 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence            99998 778887765433446899999999999999988  99999999999999999999999 999999999999999


Q ss_pred             CCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          204 QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++........   .+.. ....+++|.++||++++.+.||+++  .+.+|+.|.+|||..
T Consensus       297 ~~s~~ip~~p---~y~~-~~~~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~  350 (418)
T 4eue_A          297 KASAYIPTFP---LYAA-ILYKVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGR  350 (418)
T ss_dssp             HHHHTSTTHH---HHHH-HHHHHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSC
T ss_pred             hhhhcCCCCc---HHHH-HHHHHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCce
Confidence            8765432211   1111 1112577889999999999999987  667999999998754

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.6e-39  Score=274.39  Aligned_cols=222  Identities=27%  Similarity=0.332  Sum_probs=193.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~-~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .++|++|||||++|||++++++|++ +|++|++++|+.+.+++..+++.+.+.++.++.+|++|+++++++++++.+.+ 
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   80 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            4689999999999999999999999 99999999999999999888888777789999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCC-HHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC------------
Q 024551           95 GKLNILVNNAALVVMKRATEYT-LEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS------------  161 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~------------  161 (266)
                      +++|+||||||....... ..+ .++|++.+++|+.+++++++.++|.|++  .|+||++||..+..+            
T Consensus        81 g~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~  157 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKF  157 (276)
T ss_dssp             SSEEEEEECCCCCCCTTC-CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred             CCCCEEEECCcccccCCC-ccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhhc
Confidence            789999999998754432 334 5889999999999999999999999865  379999999876532            


Q ss_pred             -----------------------------CCCchhhhhhHHHHHHHHHHHHHHhcc----CCcEEEEEecCcccCCCCCC
Q 024551          162 -----------------------------IPRLSAYAASKGAINQLTKNLACEWAT----DSIRVNAVSPWAVNTQISPP  208 (266)
Q Consensus       162 -----------------------------~~~~~~y~~sK~al~~~~~~~a~el~~----~gi~v~~i~PG~v~t~~~~~  208 (266)
                                                   ..+...|++||++++.|++.++.++..    +||+|++|+||+++|++...
T Consensus       158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~  237 (276)
T 1wma_A          158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  237 (276)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence                                         012378999999999999999999988    79999999999999998653


Q ss_pred             CccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC--CCCccccEEEeCCC
Q 024551          209 DLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA--ASYITGQVISIDGG  261 (266)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~--~~~~~G~~l~vdgG  261 (266)
                                         .+..+|+|+|+.++||++..  ..+++|+++. |++
T Consensus       238 -------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          238 -------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             -------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             -------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence                               24678999999999999844  4699999987 654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=4e-38  Score=268.29  Aligned_cols=218  Identities=22%  Similarity=0.268  Sum_probs=189.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ..++||+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+. ++.++.+|++|+++++++++++.+.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999988888876654 7899999999999999999999999


Q ss_pred             cCCcccEEEec-cccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNN-AALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      + +++|++||| +|... .++.+.+.++|++.+++|+.++++++++++|.|+++ .|+||++||..+..+.++...|++|
T Consensus       104 ~-g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  180 (286)
T 1xu9_A          104 M-GGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSAS  180 (286)
T ss_dssp             H-TSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             c-CCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHH
Confidence            8 789999999 56543 345567899999999999999999999999999765 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHh--ccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          172 KGAINQLTKNLACEW--ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       172 K~al~~~~~~~a~el--~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      |+++++|+++++.|+  ...||+|++|+||+++|++........            ......+|+|+|+.++..+..
T Consensus       181 K~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~------------~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          181 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI------------VHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG------------GGGGCBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc------------ccCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999  578999999999999998643211110            011346899999999988854

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.3e-38  Score=317.97  Aligned_cols=241  Identities=20%  Similarity=0.212  Sum_probs=204.2

Q ss_pred             cccCCCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHh----cCCeeEEEeccCCCHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRG-IGYAIVEELARFGASVHTC-GRDQNMINERIQEWES----KGFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        13 ~~~~~~k~vlItGas~g-iG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      .++++||++|||||++| ||+++|++|+++|++|+++ .|+.+.+++..+++.+    .+.++.++++|++|++++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            35689999999999998 9999999999999999998 6888888777766632    2668999999999999999999


Q ss_pred             HHHHhh-----cCC-cccEEEecccccccc-CCCCCC--HHHHHHHhccchhhHHHHHHHH--HHHHHhcCCCeEEEEec
Q 024551           87 ETVSSV-----FDG-KLNILVNNAALVVMK-RATEYT--LEEYSSVMSTNVESSYHLCQLA--HPLLKASGNASIVFMSS  155 (266)
Q Consensus        87 ~~~~~~-----~~~-~id~lv~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~m~~~~~g~iv~vss  155 (266)
                      +++.+.     + | ++|+||||||+...+ ++.+.+  .++|++++++|+.+++++++.+  +|.|.+++.|+||++||
T Consensus       750 ~~i~~~~~~~G~-G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS  828 (1887)
T 2uv8_A          750 EFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  828 (1887)
T ss_dssp             HHHHSCTTTTSC-CCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECS
T ss_pred             HHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcC
Confidence            999988     5 5 899999999998776 788888  8999999999999999999988  78887776789999999


Q ss_pred             CCCCCCCCCchhhhhhHHHHHHH-HHHHHHHhccCCcEEEEEecCccc-CCCCCCCccchhHHHHHHHHhcCCCCCCCCc
Q 024551          156 VAGAISIPRLSAYAASKGAINQL-TKNLACEWATDSIRVNAVSPWAVN-TQISPPDLNDLLVQEYVKLIAKTPLARSAEP  233 (266)
Q Consensus       156 ~~~~~~~~~~~~y~~sK~al~~~-~~~~a~el~~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (266)
                      ..+..+  +...|++||+|+++| ++.++.+++++ |+||+|+||+++ |+|....  ...    .......++ |..+|
T Consensus       829 ~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~--~~~----~~~~~~~pl-r~~sP  898 (1887)
T 2uv8_A          829 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN--NII----AEGIEKMGV-RTFSQ  898 (1887)
T ss_dssp             CTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C--CTT----HHHHHTTSC-CCEEH
T ss_pred             hHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc--hhH----HHHHHhcCC-CCCCH
Confidence            998876  678999999999999 99999999988 999999999999 7876531  111    112234555 66699


Q ss_pred             cchHHHHHHHhcCC-CCCccccEEEeC--CCccC
Q 024551          234 NEISPLVAFLCLPA-ASYITGQVISID--GGYTA  264 (266)
Q Consensus       234 ~eia~~~~~l~s~~-~~~~~G~~l~vd--gG~~~  264 (266)
                      +|+|+.++||+++. .+++||+.|.+|  ||++.
T Consensus       899 EEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~  932 (1887)
T 2uv8_A          899 KEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQF  932 (1887)
T ss_dssp             HHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTT
T ss_pred             HHHHHHHHHHhCCCccccccCcEEEEECCCCeec
Confidence            99999999999987 789999999875  99865

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-39  Score=314.34  Aligned_cols=243  Identities=19%  Similarity=0.187  Sum_probs=206.3

Q ss_pred             CccccCCCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHh----cCCeeEEEeccCCCHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRG-IGYAIVEELARFGASVHTC-GRDQNMINERIQEWES----KGFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~g-iG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~i~~   84 (266)
                      ...++++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.+    .+.++.++++|++|++++++
T Consensus       469 ~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVea  548 (1688)
T 2pff_A          469 XXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA  548 (1688)
T ss_dssp             SSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHH
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHH
Confidence            4456789999999999998 9999999999999999988 6877777777666633    25689999999999999999


Q ss_pred             HHHHHHhh-----cCC-cccEEEecccccccc-CCCCCC--HHHHHHHhccchhhHHHHHHHH--HHHHHhcCCCeEEEE
Q 024551           85 LIETVSSV-----FDG-KLNILVNNAALVVMK-RATEYT--LEEYSSVMSTNVESSYHLCQLA--HPLLKASGNASIVFM  153 (266)
Q Consensus        85 ~~~~~~~~-----~~~-~id~lv~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~m~~~~~g~iv~v  153 (266)
                      +++++.+.     + + ++|+||||||+...+ ++.+.+  .++|++.+++|+.+++.+++.+  .|.|++++.|+||++
T Consensus       549 LVe~I~e~~~~~Gf-G~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnI  627 (1688)
T 2pff_A          549 LIEFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPM  627 (1688)
T ss_dssp             HHHHHHSCTTSSSC-CCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCC
T ss_pred             HHHHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEE
Confidence            99999988     6 5 899999999988776 788888  9999999999999999999998  888887767899999


Q ss_pred             ecCCCCCCCCCchhhhhhHHHHHHH-HHHHHHHhccCCcEEEEEecCccc-CCCCCCCccchhHHHHHHHHhcCCCCCCC
Q 024551          154 SSVAGAISIPRLSAYAASKGAINQL-TKNLACEWATDSIRVNAVSPWAVN-TQISPPDLNDLLVQEYVKLIAKTPLARSA  231 (266)
Q Consensus       154 ss~~~~~~~~~~~~y~~sK~al~~~-~~~~a~el~~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (266)
                      ||..+..+  +...|++||+|+++| ++.++.+++++ |+||+|+||+++ |++.......      .......++ |..
T Consensus       628 SSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~------~~~l~~ipl-R~~  697 (1688)
T 2pff_A          628 SPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNII------AEGIEKMGV-RTF  697 (1688)
T ss_dssp             CSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTC------STTTSSSSC-CCC
T ss_pred             EChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHH------HHHHHhCCC-CCC
Confidence            99988876  678999999999999 88888888887 999999999999 7876531000      011123444 566


Q ss_pred             CccchHHHHHHHhcCC-CCCccccEEEeC--CCccC
Q 024551          232 EPNEISPLVAFLCLPA-ASYITGQVISID--GGYTA  264 (266)
Q Consensus       232 ~~~eia~~~~~l~s~~-~~~~~G~~l~vd--gG~~~  264 (266)
                      +|+|+|+.++||+++. .+++||+.|.+|  ||++.
T Consensus       698 sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~  733 (1688)
T 2pff_A          698 SQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQF  733 (1688)
T ss_dssp             CCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGG
T ss_pred             CHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeee
Confidence            9999999999999988 789999999876  99864

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.6e-37  Score=309.79  Aligned_cols=240  Identities=19%  Similarity=0.190  Sum_probs=203.0

Q ss_pred             ccCCCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHH----hcCCeeEEEeccCCCHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRG-IGYAIVEELARFGASVHTC-GRDQNMINERIQEWE----SKGFKVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus        14 ~~~~~k~vlItGas~g-iG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~----~~~~~~~~~~~D~~~~~~i~~~~~   87 (266)
                      ++++||++|||||++| ||+++|++|+++|++|+++ .|+.+.+++..+++.    ..+.++.+++||++|+++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            5689999999999999 9999999999999999998 477777766665552    236789999999999999999999


Q ss_pred             HHHhh---cCC-cccEEEecccccccc-CCCCCC--HHHHHHHhccchhhHHHHHHH--HHHHHHhcCCCeEEEEecCCC
Q 024551           88 TVSSV---FDG-KLNILVNNAALVVMK-RATEYT--LEEYSSVMSTNVESSYHLCQL--AHPLLKASGNASIVFMSSVAG  158 (266)
Q Consensus        88 ~~~~~---~~~-~id~lv~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~m~~~~~g~iv~vss~~~  158 (266)
                      ++.+.   + | ++|+||||||+...+ ++.+.+  .++|++++++|+.+++++++.  ++|.|.+++.|+||++||..+
T Consensus       728 ~i~~~~~~~-G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag  806 (1878)
T 2uv9_A          728 YIYDTKNGL-GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG  806 (1878)
T ss_dssp             HHHCSSSSC-CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred             HHHHhhccc-CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence            99988   7 6 899999999998776 788888  899999999999999999987  678887776789999999998


Q ss_pred             CCCCCCchhhhhhHHHHHHHHHHHHHH-hccCCcEEEEEecCccc-CCCCCCCccchhHHHHHHHHhcCCCCCCCCccch
Q 024551          159 AISIPRLSAYAASKGAINQLTKNLACE-WATDSIRVNAVSPWAVN-TQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEI  236 (266)
Q Consensus       159 ~~~~~~~~~y~~sK~al~~~~~~~a~e-l~~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei  236 (266)
                      ..+  +...|++||+++++|++.++.+ ++++ |+||+|+||+++ |+|....   .   .........++ |..+|+|+
T Consensus       807 ~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~---~---~~~~~~~~~pl-r~~sPeEV  876 (1878)
T 2uv9_A          807 TFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN---N---LVAEGVEKLGV-RTFSQQEM  876 (1878)
T ss_dssp             SSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH---H---HTHHHHHTTTC-CCBCHHHH
T ss_pred             ccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc---h---hhHHHHHhcCC-CCCCHHHH
Confidence            876  4789999999999999877654 7776 999999999999 9986531   1   11222334555 55699999


Q ss_pred             HHHHHHHhcCCC-CCccccEEEe--CCCccC
Q 024551          237 SPLVAFLCLPAA-SYITGQVISI--DGGYTA  264 (266)
Q Consensus       237 a~~~~~l~s~~~-~~~~G~~l~v--dgG~~~  264 (266)
                      |+.++||+++.. +++||+.|.+  |||++.
T Consensus       877 A~avlfLaSd~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          877 AFNLLGLMAPAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             HHHHHHHHSHHHHHHHTTSCEEEEESCSGGG
T ss_pred             HHHHHHHhCCcccccccCcEEEEEcCCCccc
Confidence            999999999887 8999999987  599864

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=3.6e-36  Score=243.26  Aligned_cols=200  Identities=22%  Similarity=0.256  Sum_probs=177.7

Q ss_pred             CC-EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GM-TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k-~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +| +++||||+++||++++++|+ +|++|++++|+++                 ++++|++|+++++++++++     ++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~   58 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV-----GK   58 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh-----CC
Confidence            44 79999999999999999999 9999999999864                 4689999999999998865     68


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|++|||||.....++.+.+.++|++.+++|+.+++++++++.|.|++  .++||++||..+..+.++...|+.+|++++
T Consensus        59 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  136 (202)
T 3d7l_A           59 VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVT  136 (202)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence            999999999877777888899999999999999999999999998865  389999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEE
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVI  256 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l  256 (266)
                      .+++.++.|+ ++||+++.++||++.|++..             .....+.+++.+++|+|+.+++++.   .+++|+.+
T Consensus       137 ~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~-------------~~~~~~~~~~~~~~dva~~~~~~~~---~~~~G~~~  199 (202)
T 3d7l_A          137 AFAKSAAIEM-PRGIRINTVSPNVLEESWDK-------------LEPFFEGFLPVPAAKVARAFEKSVF---GAQTGESY  199 (202)
T ss_dssp             HHHHHHTTSC-STTCEEEEEEECCBGGGHHH-------------HGGGSTTCCCBCHHHHHHHHHHHHH---SCCCSCEE
T ss_pred             HHHHHHHHHc-cCCeEEEEEecCccCCchhh-------------hhhhccccCCCCHHHHHHHHHHhhh---ccccCceE
Confidence            9999999999 78999999999999997521             1123456778899999999998883   57899999


Q ss_pred             EeC
Q 024551          257 SID  259 (266)
Q Consensus       257 ~vd  259 (266)
                      ++|
T Consensus       200 ~vd  202 (202)
T 3d7l_A          200 QVY  202 (202)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            987

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=1.1e-36  Score=254.34  Aligned_cols=219  Identities=29%  Similarity=0.340  Sum_probs=182.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |++|||||+++||++++++|+++|++|++++|+++.++.             .+.+|++|++++++++++.   . +++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~-~~~d   64 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---G-GVLD   64 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---T-TCCS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---C-CCcc
Confidence            689999999999999999999999999999998764321             1678999999999988865   2 6799


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC----------------
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI----------------  162 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~----------------  162 (266)
                      +||||||....       .+.|++.+++|+.+++++++++.|.|++++.++||++||..+..+.                
T Consensus        65 ~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           65 GLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             EEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             EEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            99999997542       1238899999999999999999999988777899999999887654                


Q ss_pred             ----------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC--CCCCC
Q 024551          163 ----------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT--PLARS  230 (266)
Q Consensus       163 ----------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~  230 (266)
                                ++...|+.||++++.+++.++.++.++||+++.++||++.|++..........   .......  +.+++
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  214 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY---GESTRRFVAPLGRG  214 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT---HHHHHSCCCTTSSC
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh---HHHHHHHHHHhcCC
Confidence                      56678999999999999999999999999999999999999864332111111   1112222  77889


Q ss_pred             CCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          231 AEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      .+++|+|+++++++++...+++|+.+.+|||+.+
T Consensus       215 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  248 (255)
T 2dkn_A          215 SEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDA  248 (255)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             CCHHHHHHHHHHHhCCCcccceeeEEEecCCeEe
Confidence            9999999999999988777999999999999754

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=3.1e-35  Score=238.47  Aligned_cols=200  Identities=22%  Similarity=0.269  Sum_probs=173.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||++|||++++++|+++  +|++++|+++.++++.+++..     .++++|++|++++++++++    + +++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~-~~id   68 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----A-GPLD   68 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----H-CSEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----c-CCCC
Confidence            68999999999999999999999  999999999888877776632     7889999999999999887    4 6899


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      ++|||||.....++.+.+.++|++.+++|+.+++++++++    ++++.++||++||..+..+.++...|+++|++++.+
T Consensus        69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           69 LLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY  144 (207)
T ss_dssp             EEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence            9999999887778888899999999999999999999988    344468999999999988889999999999999999


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++.++.+++++||+++.++||++.|++...              ...+.+++.+|+|+|+.+++++.+..
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~--------------~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVATGLWAP--------------LGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBCSGGGGG--------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHhhhCCEEEEEecCcccCCCccc--------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999987321              12356789999999999999997554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=6.8e-34  Score=260.38  Aligned_cols=219  Identities=20%  Similarity=0.176  Sum_probs=185.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEe-cCC-------------hhHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGAS-VHTC-GRD-------------QNMINERIQEWESKGFKVTGSVCDLSFGD   80 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~-v~~~-~r~-------------~~~~~~~~~~l~~~~~~~~~~~~D~~~~~   80 (266)
                      -++|++|||||++|||+++|++|+++|++ |+++ +|+             .+.++++.+++.+.+.++.++.||++|++
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            47899999999999999999999999998 7777 898             45667888888888899999999999999


Q ss_pred             HHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCC
Q 024551           81 QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGA  159 (266)
Q Consensus        81 ~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~  159 (266)
                      +++++++++. .+ +++|+||||||+...+.+.+.+.++|++++++|+.+++++.+.+.+.|++++ .++||++||.++.
T Consensus       329 ~v~~~~~~i~-~~-g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~  406 (525)
T 3qp9_A          329 AAARLLAGVS-DA-HPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI  406 (525)
T ss_dssp             HHHHHHHTSC-TT-SCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred             HHHHHHHHHH-hc-CCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence            9999999998 66 7899999999999888999999999999999999999999999999998776 7899999999999


Q ss_pred             CCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHH
Q 024551          160 ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPL  239 (266)
Q Consensus       160 ~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~  239 (266)
                      .+.++...|+++|+++++|+    .++..+||++++|+||+++|+|....   ....   .+ .... .+..+|+|+++.
T Consensus       407 ~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~---~~~~---~~-~~~g-~~~l~pee~a~~  474 (525)
T 3qp9_A          407 WGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG---ATGE---RL-RRLG-LRPLAPATALTA  474 (525)
T ss_dssp             TCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS---HHHH---HH-HHTT-BCCBCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch---hhHH---HH-HhcC-CCCCCHHHHHHH
Confidence            99999999999999999985    46778899999999999999886431   1111   11 1111 145689999999


Q ss_pred             HHHHhcCCC
Q 024551          240 VAFLCLPAA  248 (266)
Q Consensus       240 ~~~l~s~~~  248 (266)
                      +.++++...
T Consensus       475 l~~~l~~~~  483 (525)
T 3qp9_A          475 LDTALGHGD  483 (525)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHhCCC
Confidence            999997544

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=100.00  E-value=2.1e-33  Score=292.21  Aligned_cols=239  Identities=17%  Similarity=0.200  Sum_probs=185.3

Q ss_pred             cCCCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEecCChhH-----HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRG-IGYAIVEELARFGASVHTCGRDQNM-----INERIQEWESKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        15 ~~~~k~vlItGas~g-iG~aia~~la~~G~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      .++||++|||||++| ||+++|++|+++|++|++++|+.+.     ++++.+++...+.++..+++|++|++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            489999999999999 9999999999999999999998776     6777777766678899999999999999999999


Q ss_pred             HHh----hcCCcccEEEecccc----ccc-cCCCCCCHHH----HHHHhccchhhHHHHHHHHHHHHHhcCCC----eEE
Q 024551           89 VSS----VFDGKLNILVNNAAL----VVM-KRATEYTLEE----YSSVMSTNVESSYHLCQLAHPLLKASGNA----SIV  151 (266)
Q Consensus        89 ~~~----~~~~~id~lv~~ag~----~~~-~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~m~~~~~g----~iv  151 (266)
                      +.+    .+ |++|+||||||+    ... ....+.+.++    ++..+++|+.+++.+++.+.|.|.+++.+    .|+
T Consensus      2213 i~~~~~~~f-G~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D         2213 VGTEQTESL-GPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp             HTSCCEEEE-SSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHhhhhhhc-CCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence            998    78 889999999997    211 1222223333    45559999999999999999999876532    223


Q ss_pred             EEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHH--hccCCcEEEEEecCccc-CCCCCCCccchhHHHHHHHHhcCCCC
Q 024551          152 FMSSVAGAISIPRLSAYAASKGAINQLTKNLACE--WATDSIRVNAVSPWAVN-TQISPPDLNDLLVQEYVKLIAKTPLA  228 (266)
Q Consensus       152 ~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~e--l~~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~  228 (266)
                      .+++..+  ..++...|++||+|+++|+|+++.|  +++ +|+||+++||+|+ |++......  .    .......+.+
T Consensus      2292 ~~ss~~g--~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~--~----~~~~~~~~~r 2362 (3089)
T 3zen_D         2292 PGSPNRG--MFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDA--I----VSAVEEAGVT 2362 (3089)
T ss_dssp             EECSSTT--SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTT--T----HHHHGGGSCB
T ss_pred             ECCcccc--cCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchh--H----HHHHHhcCCC
Confidence            3333322  2345668999999999999999999  664 6999999999999 666543211  1    1222334544


Q ss_pred             CCCCccchHHHHHHHhcCCCCCc-cccEEEeC--CCccC
Q 024551          229 RSAEPNEISPLVAFLCLPAASYI-TGQVISID--GGYTA  264 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~~~~~~-~G~~l~vd--gG~~~  264 (266)
                      +. +|+|+|..++||+|+.++++ +|+.+.+|  ||+.-
T Consensus      2363 ~~-~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2363 TY-TTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             CE-EHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             CC-CHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            44 99999999999999886655 45656666  98853

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=4.7e-31  Score=251.99  Aligned_cols=214  Identities=20%  Similarity=0.263  Sum_probs=178.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHH-HCCCe-EEEecCC---hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELA-RFGAS-VHTCGRD---QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la-~~G~~-v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .+|+++||||++|||+++|++|+ ++|++ |++++|+   .+..+++.+++.+.+.++++++||++|+++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            68999999999999999999999 79995 9999998   5567888888988899999999999999999999999987


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+  ++|+||||||+...+.+.+.+.++|++.+++|+.|++++.+++.|.|      +||++||.++..+.+++..|+++
T Consensus       609 ~~--~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAa  680 (795)
T 3slk_A          609 EH--PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAA  680 (795)
T ss_dssp             TS--CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHH
T ss_pred             hC--CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHH
Confidence            64  79999999999988899999999999999999999999999987766      89999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |+    |+++++.+++.+||++|+|+||++.|+++.......    .........+.. .+++|....+.+.+...
T Consensus       681 ka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~----~~~~~~~~g~~~-l~~~e~~~~~~~~l~~~  747 (795)
T 3slk_A          681 NS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREA----EQDRLARSGLLP-ISTEEGLSQFDAACGGA  747 (795)
T ss_dssp             HH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHH----HHHHHHHTTBCC-CCHHHHHHHHHHHHTSS
T ss_pred             HH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHH----HHHHHHhcCCCC-CCHHHHHHHHHHHHhCC
Confidence            96    566666777888999999999999987643221111    112223334433 45667766666555433

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=5.7e-31  Score=238.72  Aligned_cols=214  Identities=21%  Similarity=0.225  Sum_probs=176.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCCh---hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQ---NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +|++|||||++|||++++++|+++|+ +|++++|+.   +..+++.+++.+.+.++.++.||++|+++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            59999999999999999999999998 788999964   4467788888888899999999999999999999998776 


Q ss_pred             CCcccEEEeccccc-cccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALV-VMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||+. ..+.+.+.+.++|++.+++|+.+++++.+.+.    +...++||++||.++..+.++...|+++|
T Consensus       318 -g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~----~~~~~~iV~~SS~a~~~g~~g~~~YaAaK  392 (496)
T 3mje_A          318 -APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTA----DLDLDAFVLFSSGAAVWGSGGQPGYAAAN  392 (496)
T ss_dssp             -SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred             -CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhh----ccCCCEEEEEeChHhcCCCCCcHHHHHHH
Confidence             4799999999998 67789999999999999999999999988764    44568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +++++|++.    +..+||++++|+||++.+..+......  ..   .+.. ..+ ...+|++.+..+.+++....
T Consensus       393 a~ldala~~----~~~~Gi~v~sV~pG~w~~~gm~~~~~~--~~---~l~~-~g~-~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          393 AYLDALAEH----RRSLGLTASSVAWGTWGEVGMATDPEV--HD---RLVR-QGV-LAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHH----HHHTTCCCEEEEECEESSSCC--------CH---HHHH-TTE-EEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHH----HHhcCCeEEEEECCcccCCccccChHH--HH---HHHh-cCC-CCCCHHHHHHHHHHHHcCCC
Confidence            999999875    446799999999999877654432111  01   1111 111 23589999999999986543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=2.7e-29  Score=207.66  Aligned_cols=209  Identities=18%  Similarity=0.178  Sum_probs=160.9

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCee-EEEeccCCCHHHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKV-TGSVCDLSFGDQREKLIE   87 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~D~~~~~~i~~~~~   87 (266)
                      ..++..+++||+++||||+|+||++++++|+++|++|++++|+++.++++.+      .++ .++++|++         +
T Consensus        12 ~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~   76 (236)
T 3e8x_A           12 SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE---------E   76 (236)
T ss_dssp             ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT---------S
T ss_pred             ccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH---------H
Confidence            3344567899999999999999999999999999999999999987765443      256 88999999         3


Q ss_pred             HHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC---CC
Q 024551           88 TVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI---PR  164 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~---~~  164 (266)
                      .+.+.+ +.+|+||||||....        +++++.+++|+.++.++++++    ++.+.++||++||..+..+.   +.
T Consensus        77 ~~~~~~-~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~~~  143 (236)
T 3e8x_A           77 DFSHAF-ASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTVDPDQGPMN  143 (236)
T ss_dssp             CCGGGG-TTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCSCGGGSCGG
T ss_pred             HHHHHH-cCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCCCCCCChhh
Confidence            344455 579999999997532        347889999999999998888    44456899999998776654   46


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      ...|+.+|++++.+.+       ..|++++.++||++.++..........        .......+..++|+|+++++++
T Consensus       144 ~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~--------~~~~~~~~i~~~Dva~~~~~~~  208 (236)
T 3e8x_A          144 MRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP--------HFSEITRSITRHDVAKVIAELV  208 (236)
T ss_dssp             GHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES--------SCSCCCCCEEHHHHHHHHHHHT
T ss_pred             hhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc--------CCCcccCcEeHHHHHHHHHHHh
Confidence            7899999999999876       468999999999999987544322110        1122356788999999999999


Q ss_pred             cCCCCCccccEEEeCCCc
Q 024551          245 LPAASYITGQVISIDGGY  262 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~  262 (266)
                      .+..  .+|+.+.+++|.
T Consensus       209 ~~~~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          209 DQQH--TIGKTFEVLNGD  224 (236)
T ss_dssp             TCGG--GTTEEEEEEECS
T ss_pred             cCcc--ccCCeEEEeCCC
Confidence            7643  789999998874

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.96  E-value=6.2e-29  Score=225.78  Aligned_cols=213  Identities=22%  Similarity=0.218  Sum_probs=174.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChh---HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQN---MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      -.+|++|||||++|||++++++|+++|++ |++++|+..   ..+++.+++...+.++.++.||++|+++++++++++ +
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            46899999999999999999999999996 999999875   466777888887889999999999999999999998 5


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ +++|+||||||+...+.+.+.+.++|++.+++|+.+++++.+.+.    +.+.++||++||.++..+.++...|+++
T Consensus       303 ~~-g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~----~~~~~~~V~~SS~a~~~g~~g~~~Yaaa  377 (486)
T 2fr1_A          303 DD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSFASAFGAPGLGGYAPG  377 (486)
T ss_dssp             TT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             hc-CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhC----cCCCCEEEEEcChHhcCCCCCCHHHHHH
Confidence            55 789999999999888888899999999999999999999988773    4456899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCC-CCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQ-ISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++++.|++.+    ..+|+++++|+||++.++ |.....        ...... .-....+++|+++.+.+++...
T Consensus       378 ka~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~~~--------~~~~~~-~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          378 NAYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAEGPV--------ADRFRR-HGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             HHHHHHHHHHH----HHTTCCCEEEEECCBC--------------------CTT-TTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHH----HhcCCeEEEEECCeeCCCcccchhH--------HHHHHh-cCCCCCCHHHHHHHHHHHHhCC
Confidence            99999987654    456999999999999876 322110        000000 1113568999999999998654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.96  E-value=3.3e-28  Score=221.98  Aligned_cols=210  Identities=20%  Similarity=0.216  Sum_probs=175.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChh---HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQN---MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      -.+|++|||||++|||++++++|+++|+ +|++++|+..   .++++.+++...+.++.++.||++|++++++++++   
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            3689999999999999999999999999 5999999874   46777788888788999999999999999999886   


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                         +++|+||||||+...+.+.+.+.++|++.+++|+.+++++.+.+.+.   .+.++||++||..+..+.++...|+++
T Consensus       334 ---~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~Yaaa  407 (511)
T 2z5l_A          334 ---YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAA  407 (511)
T ss_dssp             ---SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHH
T ss_pred             ---CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHH
Confidence               47999999999988888889999999999999999999998876321   146899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcc-cCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAV-NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++++.|++.+    ..+|+++++|+||++ +|+|.....    .....  ...   ....+++|+++.+..++...
T Consensus       408 Ka~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~----~~~~~--~~g---~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          408 NAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAG----EESLS--RRG---LRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHH----HHHHH--HHT---BCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHH----HHcCCcEEEEECCcccCCccccccc----HHHHH--hcC---CCCCCHHHHHHHHHHHHhCC
Confidence            99999999864    457999999999998 777765421    11111  111   13568999999999988643

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=3e-27  Score=199.14  Aligned_cols=182  Identities=16%  Similarity=0.173  Sum_probs=149.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++|++|||||+++||++++++|+++|++|++++|++...+         +.++.++.+|++|+++++++++        +
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~--------~   64 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA--------G   64 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT--------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc--------C
Confidence            4689999999999999999999999999999999875432         4578999999999999988876        4


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC------------CCCCC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA------------ISIPR  164 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~------------~~~~~  164 (266)
                      +|+||||||..        +.+.|++.+++|+.+++++++++    ++.+.++||++||..++            .+.++
T Consensus        65 ~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~  132 (267)
T 3rft_A           65 CDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIGYYPQTERLGPDVPARP  132 (267)
T ss_dssp             CSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCC
T ss_pred             CCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCC
Confidence            89999999984        22347889999999999999998    44556899999998776            34455


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      ...|+.||++.+.+++.++.++   |++++.|.||.+.++.......    .            .+..++|+++.+..++
T Consensus       133 ~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~~----~------------~~~~~~d~a~~~~~~~  193 (267)
T 3rft_A          133 DGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRML----S------------TWFSHDDFVSLIEAVF  193 (267)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTHH----H------------HBCCHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCce----e------------eEEcHHHHHHHHHHHH
Confidence            6899999999999999998875   6899999999998875433211    0            2457888898888887


Q ss_pred             cC
Q 024551          245 LP  246 (266)
Q Consensus       245 s~  246 (266)
                      ..
T Consensus       194 ~~  195 (267)
T 3rft_A          194 RA  195 (267)
T ss_dssp             HC
T ss_pred             hC
Confidence            54

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=2.6e-26  Score=187.86  Aligned_cols=192  Identities=8%  Similarity=0.019  Sum_probs=149.9

Q ss_pred             CEEEEecCCCchHHHHHHHHH-HCCCeEEEecCChh-HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           19 MTALVTGGTRGIGYAIVEELA-RFGASVHTCGRDQN-MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la-~~G~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      |+++||||+++||++++++|+ ++|++|++++|+++ .++++.    ..+.++.++++|++|+++++++++        .
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~--------~   73 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT--------N   73 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT--------T
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc--------C
Confidence            789999999999999999999 89999999999987 655443    235678999999999999888775        4


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCch----------
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLS----------  166 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~----------  166 (266)
                      +|+||||+|..                   |+.     ++.+++.|++.+.++||++||..++.+.+...          
T Consensus        74 ~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~  129 (221)
T 3r6d_A           74 AEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPI  129 (221)
T ss_dssp             CSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred             CCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccccc
Confidence            89999999953                   222     78888888888778999999999887666544          


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh--
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC--  244 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~--  244 (266)
                      .|+.+|.+++.+.+.       .|++++.|+||++.++.....+.....       .....++..+++|+|++++|++  
T Consensus       130 ~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~dvA~~~~~l~~~  195 (221)
T 3r6d_A          130 SYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIPE-------GAQFNDAQVSREAVVKAIFDILHA  195 (221)
T ss_dssp             HHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEECT-------TSCCCCCEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeeccC-------CccCCCceeeHHHHHHHHHHHHHh
Confidence            899999999988763       689999999999988733222211100       0112234678899999999999  


Q ss_pred             cCCCCCccccEEEeCC
Q 024551          245 LPAASYITGQVISIDG  260 (266)
Q Consensus       245 s~~~~~~~G~~l~vdg  260 (266)
                      ++...++++.....+.
T Consensus       196 ~~~~~~~~~~~~i~~~  211 (221)
T 3r6d_A          196 ADETPFHRTSIGVGEP  211 (221)
T ss_dssp             SCCGGGTTEEEEEECT
T ss_pred             cChhhhhcceeeecCC
Confidence            8877777666554443

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=2.5e-28  Score=202.30  Aligned_cols=199  Identities=14%  Similarity=0.135  Sum_probs=152.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +.+++|+++||||+++||++++++|+++|+  +|++++|+++.+++..      ..++.++.+|++|+++++++++    
T Consensus        14 ~~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~----   83 (242)
T 2bka_A           14 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ----   83 (242)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS----
T ss_pred             hhhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc----
Confidence            346899999999999999999999999999  9999999876543211      1257888999999988776543    


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                          ++|++|||||....       .+.+++.+++|+.++..+++++    ++.+.++||++||..++.  +....|+.+
T Consensus        84 ----~~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~--~~~~~Y~~s  146 (242)
T 2bka_A           84 ----GHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADK--SSNFLYLQV  146 (242)
T ss_dssp             ----SCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSHHHHH
T ss_pred             ----CCCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCC--CCcchHHHH
Confidence                58999999997532       2457889999999999987765    455568999999988765  345689999


Q ss_pred             HHHHHHHHHHHHHHhccCCc-EEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC----CCCCCCccchHHHHHHHhcC
Q 024551          172 KGAINQLTKNLACEWATDSI-RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP----LARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi-~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~eia~~~~~l~s~  246 (266)
                      |++++.+++.+       ++ +++.|+||++.|++......   ...........|    .+++.+++|+|+++++++++
T Consensus       147 K~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~  216 (242)
T 2bka_A          147 KGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPG---EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVR  216 (242)
T ss_dssp             HHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHH---HHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHH---HHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhC
Confidence            99999998764       45 89999999999986432111   111122222344    45788999999999999986


Q ss_pred             CCC
Q 024551          247 AAS  249 (266)
Q Consensus       247 ~~~  249 (266)
                      ...
T Consensus       217 ~~~  219 (242)
T 2bka_A          217 PRD  219 (242)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            553

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.94  E-value=9.4e-26  Score=195.62  Aligned_cols=226  Identities=20%  Similarity=0.196  Sum_probs=170.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEE-eccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGS-VCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~-~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+... +.++.++ .+|++|+++++++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            467899999999999999999999999999999999988777666665432 3568888 899999987766543     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-CC---------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-SI---------  162 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-~~---------  162 (266)
                         ++|+|||+||.....       +++++.+++|+.++.++++++.+   ..+.++||++||..++. +.         
T Consensus        83 ---~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~~~  149 (342)
T 1y1p_A           83 ---GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYLD  149 (342)
T ss_dssp             ---TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred             ---CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCcccC
Confidence               589999999976432       23567899999999999998853   23457999999987652 21         


Q ss_pred             ---------------------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-hhHHHHHH
Q 024551          163 ---------------------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-LLVQEYVK  220 (266)
Q Consensus       163 ---------------------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~  220 (266)
                                           .+...|+.||.+.+.+++.++.+++. +++++.+.||.+.++........ ........
T Consensus       150 E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~  228 (342)
T 1y1p_A          150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMS  228 (342)
T ss_dssp             TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHH
T ss_pred             ccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHHH
Confidence                                 12357999999999999999999876 89999999999999876543211 11111111


Q ss_pred             HH--------hcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCC
Q 024551          221 LI--------AKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       221 ~~--------~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      ..        ...+.+.+..++|+|+++++++..  ...+|+.+..+|+
T Consensus       229 ~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~  275 (342)
T 1y1p_A          229 LFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCC
Confidence            11        111345678899999999999854  3467876666665

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.94  E-value=1.9e-25  Score=194.24  Aligned_cols=226  Identities=16%  Similarity=0.124  Sum_probs=168.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |++|||||+|+||++++++|+++|++|++++|+. ...+...+.+.. ..++.++.+|++|+++++++++..      ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~------~~   74 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY------MP   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH------CC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc------CC
Confidence            5899999999999999999999999999998853 222333444443 246888999999999999888752      58


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------------
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------------  160 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------------  160 (266)
                      |+|||+||....    +.+.+++++.+++|+.++.++++++.+.+.   .++||++||.+.+.                 
T Consensus        75 d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           75 DSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             SEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             CEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            999999997532    123456888999999999999999977542   26999999976532                 


Q ss_pred             ----------CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHH-HHHHHH-hcC---
Q 024551          161 ----------SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ-EYVKLI-AKT---  225 (266)
Q Consensus       161 ----------~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~~~-~~~---  225 (266)
                                +.++...|+.+|.+.+.+++.++.++   |++++.+.||++.++............ ...... ...   
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  224 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCC
Confidence                      22356789999999999999998875   799999999999998754321111111 111111 111   


Q ss_pred             -CCC---------CCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          226 -PLA---------RSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       226 -~~~---------~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                       ++.         .+..++|+|+++++++.. ....+|+.+++++|.
T Consensus       225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          225 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence             221         256789999999999853 245789999999985

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=1.8e-25  Score=194.03  Aligned_cols=232  Identities=16%  Similarity=0.106  Sum_probs=170.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+..++..+.+... +.++.++++|++|+++++++++.      +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA------H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH------S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc------c
Confidence            4689999999999999999999999999999999877666655555443 56788999999999999998875      3


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------CCCC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------SIPR  164 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~~~~  164 (266)
                      ++|+||||||......    ..+..++.+++|+.++.++++++    ++.+.++||++||...+.           +..+
T Consensus        78 ~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~  149 (341)
T 3enk_A           78 PITAAIHFAALKAVGE----SVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSA  149 (341)
T ss_dssp             CCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBC
T ss_pred             CCcEEEECccccccCc----cccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCC
Confidence            6999999999764322    23345577889999999886655    566668999999977652           2223


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc-------cchhHHHHHHHHhc--CC---------
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL-------NDLLVQEYVKLIAK--TP---------  226 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~--~~---------  226 (266)
                      ...|+.+|.+.+.+++.++.++.  +++++.+.|+.+..+.....+       .........+....  .+         
T Consensus       150 ~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (341)
T 3enk_A          150 TNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYP  227 (341)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred             CChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccC
Confidence            46899999999999999988854  599999999999876432111       11111111111111  11         


Q ss_pred             ------CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          227 ------LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       227 ------~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                            .+.+..++|+|+++++++........|+.+++.+|..+
T Consensus       228 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          228 TPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             STTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             CCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence                  12355679999999999864222356999999988643

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.93  E-value=3.2e-25  Score=193.35  Aligned_cols=218  Identities=16%  Similarity=0.093  Sum_probs=170.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHC-CC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARF-GA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~-G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++|++|||||+|+||++++++|+++ |+ +|++++|++...+++.+++.  ..++.++.+|++|.+++.++++     
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~-----   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE-----   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT-----
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh-----
Confidence            478999999999999999999999999 97 99999999988877776664  2578899999999998877664     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                         ++|+|||+||......    .....++.+++|+.++.++++++.+    .+.++||++||..+..+   ...|+.||
T Consensus        91 ---~~D~Vih~Aa~~~~~~----~~~~~~~~~~~Nv~gt~~l~~aa~~----~~v~~~V~~SS~~~~~p---~~~Y~~sK  156 (344)
T 2gn4_A           91 ---GVDICIHAAALKHVPI----AEYNPLECIKTNIMGASNVINACLK----NAISQVIALSTDKAANP---INLYGATK  156 (344)
T ss_dssp             ---TCSEEEECCCCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSSC---CSHHHHHH
T ss_pred             ---cCCEEEECCCCCCCCc----hhcCHHHHHHHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCC---ccHHHHHH
Confidence               4899999999754211    1233568899999999999999864    34679999999776543   57899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC---------CCCCCCCccchHHHHHHH
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT---------PLARSAEPNEISPLVAFL  243 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~eia~~~~~l  243 (266)
                      ++.+.+++.++.+++..|++++.+.||.+.++...  .-....   .......         ..+.+..++|+|++++++
T Consensus       157 ~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~--~i~~~~---~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~  231 (344)
T 2gn4_A          157 LCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS--VVPFFK---KLVQNKASEIPITDIRMTRFWITLDEGVSFVLKS  231 (344)
T ss_dssp             HHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS--HHHHHH---HHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC--HHHHHH---HHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHH
Confidence            99999999999888888999999999999987521  101111   1111111         112367889999999999


Q ss_pred             hcCCCCCccccEEEeCCC
Q 024551          244 CLPAASYITGQVISIDGG  261 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG  261 (266)
                      +...   ..|+.+.++++
T Consensus       232 l~~~---~~g~~~~~~~~  246 (344)
T 2gn4_A          232 LKRM---HGGEIFVPKIP  246 (344)
T ss_dssp             HHHC---CSSCEEEECCC
T ss_pred             Hhhc---cCCCEEecCCC
Confidence            8643   36788887765

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.93  E-value=5e-26  Score=197.12  Aligned_cols=225  Identities=14%  Similarity=0.042  Sum_probs=157.5

Q ss_pred             CCCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH
Q 024551            5 AEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus         5 ~~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~   84 (266)
                      .++..++++.++++|++|||||+|+||++++++|+++|++|++++|+.+...+..+.+    .++.++.+|++|++++++
T Consensus         7 ~~~~~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~   82 (330)
T 2pzm_A            7 HHHHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLER   82 (330)
T ss_dssp             -------CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHH
T ss_pred             ccccccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHH
Confidence            4566677788899999999999999999999999999999999999654322111111    468889999999999998


Q ss_pred             HHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC--
Q 024551           85 LIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI--  162 (266)
Q Consensus        85 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~--  162 (266)
                      ++++.      ++|+||||||.....     +.++++  +++|+.++.++++++.    +.+.++||++||...+...  
T Consensus        83 ~~~~~------~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~  145 (330)
T 2pzm_A           83 AFDSF------KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAAS----KAGVKRLLNFQTALCYGRPAT  145 (330)
T ss_dssp             HHHHH------CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHH----HHTCSEEEEEEEGGGGCSCSS
T ss_pred             HHhhc------CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCcc
Confidence            88764      589999999976432     345566  9999999999999886    3346799999998775443  


Q ss_pred             ---C------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc-CC-----C
Q 024551          163 ---P------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK-TP-----L  227 (266)
Q Consensus       163 ---~------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~-----~  227 (266)
                         +      +...|+.+|++.+.+++.+  +     ++...+.|+.+..|.....+.....   ...... ..     .
T Consensus       146 ~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~-----~~~~~iR~~~v~gp~~~~~~~~~~~---~~~~~~~~~~~~~~~  215 (330)
T 2pzm_A          146 VPIPIDSPTAPFTSYGISKTAGEAFLMMS--D-----VPVVSLRLANVTGPRLAIGPIPTFY---KRLKAGQKCFCSDTV  215 (330)
T ss_dssp             SSBCTTCCCCCCSHHHHHHHHHHHHHHTC--S-----SCEEEEEECEEECTTCCSSHHHHHH---HHHHTTCCCCEESCE
T ss_pred             CCCCcCCCCCCCChHHHHHHHHHHHHHHc--C-----CCEEEEeeeeeECcCCCCCHHHHHH---HHHHcCCEEeCCCCE
Confidence               2      5679999999999999876  3     3444444444433322111111111   111111 11     3


Q ss_pred             CCCCCccchHH-HHHHHhcCCCCCccccEEEeCCCccC
Q 024551          228 ARSAEPNEISP-LVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       228 ~~~~~~~eia~-~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      .++..++|+|+ ++++++... .   |+.+++++|..+
T Consensus       216 ~~~i~~~Dva~~a~~~~~~~~-~---g~~~~v~~~~~~  249 (330)
T 2pzm_A          216 RDFLDMSDFLAIADLSLQEGR-P---TGVFNVSTGEGH  249 (330)
T ss_dssp             ECEEEHHHHHHHHHHHTSTTC-C---CEEEEESCSCCE
T ss_pred             ecceeHHHHHHHHHHHHhhcC-C---CCEEEeCCCCCC
Confidence            45678999999 999999753 2   899999998643

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.93  E-value=1.5e-25  Score=193.02  Aligned_cols=220  Identities=17%  Similarity=0.146  Sum_probs=165.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ..+-|++|||||+|+||++++++|+++|++|++++|+.+. +.    +     ++.++.+|++|+++++++++.      
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~------   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD------   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH------
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh------
Confidence            3466899999999999999999999999999999998764 21    1     578899999999999988875      


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC------------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI------------  162 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~------------  162 (266)
                      +++|+|||+||.....    .+.+++++.+++|+.++.++++++ +.+.  +.++||++||...+...            
T Consensus        73 ~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~~~iv~~SS~~v~g~~~~~~~~~~E~~~  145 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LDCRILTIGSSEEYGMILPEESPVSEENQ  145 (321)
T ss_dssp             HCCSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CCCEEEEEEEGGGTBSCCGGGCSBCTTSC
T ss_pred             cCCCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CCCeEEEEccHHhcCCCCCCCCCCCCCCC
Confidence            2589999999975421    122357889999999999999998 5442  35799999998765432            


Q ss_pred             -CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-chhHHHHHHHHhc-----------CCCCC
Q 024551          163 -PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-DLLVQEYVKLIAK-----------TPLAR  229 (266)
Q Consensus       163 -~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~  229 (266)
                       ++...|+.+|.+.+.+++.++.++   |++++.+.||.+.++....... .............           .+...
T Consensus       146 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  222 (321)
T 2pk3_A          146 LRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRD  222 (321)
T ss_dssp             CBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEE
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEe
Confidence             456799999999999999998874   7999999999999987654211 1111111110001           12234


Q ss_pred             CCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          230 SAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       230 ~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +..++|+|+++++++...   .+|+.+++++|..
T Consensus       223 ~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~  253 (321)
T 2pk3_A          223 FTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIG  253 (321)
T ss_dssp             EEEHHHHHHHHHHHHHHC---CTTCEEEESCSCE
T ss_pred             eEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCC
Confidence            678999999999999654   4789999998864

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.93  E-value=1.3e-24  Score=189.68  Aligned_cols=230  Identities=14%  Similarity=0.082  Sum_probs=171.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh----HHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN----MINERIQEWESK-GFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~----~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      +++++|++|||||+|+||++++++|+++|++|++++|+..    .++++.+++... +.++.++.+|++|.++++++++ 
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-  101 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-  101 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-
Confidence            4577899999999999999999999999999999999653    344443332211 2468899999999998887765 


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-----
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-----  163 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-----  163 (266)
                             ++|+|||+||.....    .+.+++++.+++|+.++.++++++.+    .+.++||++||...+...+     
T Consensus       102 -------~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~  166 (352)
T 1sb8_A          102 -------GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKV  166 (352)
T ss_dssp             -------TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             -------CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCCC
Confidence                   489999999975321    13456888999999999999998853    4567999999987654432     


Q ss_pred             ------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC--ccchhHHHHHHHHhcCCC--------
Q 024551          164 ------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD--LNDLLVQEYVKLIAKTPL--------  227 (266)
Q Consensus       164 ------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~--------  227 (266)
                            +...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.....  ................+.        
T Consensus       167 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  243 (352)
T 1sb8_A          167 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGET  243 (352)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCc
Confidence                  35789999999999999998875   79999999999999875432  111111111222222221        


Q ss_pred             -CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          228 -ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       228 -~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                       ..+..++|+|+++++++... ....|+.+++.+|..
T Consensus       244 ~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~  279 (352)
T 1sb8_A          244 SRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGR  279 (352)
T ss_dssp             EECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCC
T ss_pred             eEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCC
Confidence             24677899999999988642 245789999998764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=2.8e-25  Score=181.48  Aligned_cols=192  Identities=14%  Similarity=0.213  Sum_probs=157.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHHHHHhhcCCccc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-GDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~~id   98 (266)
                      +++||||+|+||++++++|+++|++|++++|+++..++.        .++.++++|++| ++++.++++        .+|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~--------~~d   65 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH--------GMD   65 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT--------TCS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc--------CCC
Confidence            699999999999999999999999999999998754322        478899999999 888776654        489


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC-------chhhhhh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR-------LSAYAAS  171 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~-------~~~y~~s  171 (266)
                      +||||||....            +.+++|+.++..+++++    ++.+.++||++||..+..+.+.       ...|+.+
T Consensus        66 ~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s  129 (219)
T 3dqp_A           66 AIINVSGSGGK------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA  129 (219)
T ss_dssp             EEEECCCCTTS------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred             EEEECCcCCCC------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcccccccccccHHHHH
Confidence            99999997642            27899999999998877    4555679999999988776666       7899999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |.+.+.+.+      ...|++++.++||++.++.....+..           ......+..++|+|+++++++.+..  .
T Consensus       130 K~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~-----------~~~~~~~i~~~Dva~~i~~~l~~~~--~  190 (219)
T 3dqp_A          130 KHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI-----------NDEVSASNTIGDVADTIKELVMTDH--S  190 (219)
T ss_dssp             HHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE-----------SSSCCCCEEHHHHHHHHHHHHTCGG--G
T ss_pred             HHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc-----------CCCcCCcccHHHHHHHHHHHHhCcc--c
Confidence            999999887      35789999999999998765443221           1345577889999999999997643  5


Q ss_pred             cccEEEeCCCc
Q 024551          252 TGQVISIDGGY  262 (266)
Q Consensus       252 ~G~~l~vdgG~  262 (266)
                      .|+.+++++|.
T Consensus       191 ~g~~~~i~~g~  201 (219)
T 3dqp_A          191 IGKVISMHNGK  201 (219)
T ss_dssp             TTEEEEEEECS
T ss_pred             cCcEEEeCCCC
Confidence            59999997764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.93  E-value=7.2e-25  Score=181.22  Aligned_cols=196  Identities=12%  Similarity=0.020  Sum_probs=140.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++|||||+++||++++++|+++| ++|++++|+++.+++.      ...++.++++|++|+++++++++        .
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~--------~   88 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ--------G   88 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT--------T
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc--------C
Confidence            4899999999999999999999999 8999999998764321      13478899999999999888775        4


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh---------
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA---------  167 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~---------  167 (266)
                      +|+||||+|...                      ....++.+++.|++.+.++||++||..++.+.+....         
T Consensus        89 ~D~vv~~a~~~~----------------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~  146 (236)
T 3qvo_A           89 QDIVYANLTGED----------------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGE  146 (236)
T ss_dssp             CSEEEEECCSTT----------------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CG
T ss_pred             CCEEEEcCCCCc----------------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccc
Confidence            799999998521                      1134667888888888889999999887665543211         


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +...+...       ...+...||+++.|+||++.++.........        ......+++.+++|+|++++|++++.
T Consensus       147 ~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~--------~~~~~~~~~i~~~DvA~~i~~ll~~~  211 (236)
T 3qvo_A          147 PLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELTS--------RNEPFKGTIVSRKSVAALITDIIDKP  211 (236)
T ss_dssp             GGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEEC--------TTSCCSCSEEEHHHHHHHHHHHHHST
T ss_pred             hHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEec--------cCCCCCCcEECHHHHHHHHHHHHcCc
Confidence            11111111       2234467999999999999987543321100        01122367789999999999999987


Q ss_pred             CCCccccEEEeCCCccCC
Q 024551          248 ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~~  265 (266)
                      ..++ |+.+.++++.+..
T Consensus       212 ~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          212 EKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             TTTT-TEEEEEECSSCCC
T ss_pred             cccc-CeeEEecCCCCCC
Confidence            6666 8899999887643

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.93  E-value=3.2e-25  Score=184.23  Aligned_cols=212  Identities=13%  Similarity=0.078  Sum_probs=157.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHC--CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARF--GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++|+++||||+++||++++++|+++  |++|++++|+++..+++       ..++.++.+|++|+++++++++      
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~------   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ------   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc------
Confidence            45789999999999999999999999  89999999998765432       3467789999999999888765      


Q ss_pred             CCcccEEEeccccccccCC---------CCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC
Q 024551           94 DGKLNILVNNAALVVMKRA---------TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR  164 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~  164 (266)
                        .+|++|||||.......         .+...+++++.+++|+.++.++++++.    +.+.++||++||..+..+.++
T Consensus        69 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~  142 (253)
T 1xq6_A           69 --GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGTNPDHP  142 (253)
T ss_dssp             --TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTTCTTCG
T ss_pred             --CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccCCCCCCc
Confidence              48999999997543211         222334455678999999999887774    445679999999987655444


Q ss_pred             chh-----hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC--ccchhHHHHHHHHhcCCCCCCCCccchH
Q 024551          165 LSA-----YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD--LNDLLVQEYVKLIAKTPLARSAEPNEIS  237 (266)
Q Consensus       165 ~~~-----y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~eia  237 (266)
                      ...     |..+|.+++.+++.       .|++++.++||++.++.....  .....    ....  ....++..++|+|
T Consensus       143 ~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~Dva  209 (253)
T 1xq6_A          143 LNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKD----DELL--QTDTKTVPRADVA  209 (253)
T ss_dssp             GGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEEST----TGGG--GSSCCEEEHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCC----cCCc--CCCCcEEcHHHHH
Confidence            444     55599999988763       689999999999998764321  11100    0001  1234577899999


Q ss_pred             HHHHHHhcCCCCCccccEEEeCCC
Q 024551          238 PLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      +++++++....  .+|+.++++++
T Consensus       210 ~~~~~~~~~~~--~~g~~~~i~~~  231 (253)
T 1xq6_A          210 EVCIQALLFEE--AKNKAFDLGSK  231 (253)
T ss_dssp             HHHHHHTTCGG--GTTEEEEEEEC
T ss_pred             HHHHHHHcCcc--ccCCEEEecCC
Confidence            99999996532  57999999886

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.92  E-value=2.6e-25  Score=194.55  Aligned_cols=224  Identities=15%  Similarity=0.166  Sum_probs=167.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-CCeEEEecCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           20 TALVTGGTRGIGYAIVEELARF-GASVHTCGRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~-G~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++|||||+|+||++++++|+++ |++|++++|+.  ...+.+ +++.. +.++.++.+|++|++++.+++++.      +
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~------~   73 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE-SNRYNFEHADICDSAEITRIFEQY------Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT-CTTEEEEECCTTCHHHHHHHHHHH------C
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc-CCCeEEEECCCCCHHHHHHHHhhc------C
Confidence            5999999999999999999998 79999999864  222221 11211 357889999999999999888752      5


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-----CCeEEEEecCCCCC-----------
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-----NASIVFMSSVAGAI-----------  160 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-----~g~iv~vss~~~~~-----------  160 (266)
                      +|+|||+||....    +.+.+++++.+++|+.++.++++++.+.|..-+     .++||++||...+.           
T Consensus        74 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           74 PDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             CSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            8999999997532    123456788999999999999999999875421     35999999975332           


Q ss_pred             ----------CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC-----
Q 024551          161 ----------SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-----  225 (266)
Q Consensus       161 ----------~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-----  225 (266)
                                +.++...|+.+|++.+.+++.++.++   |++++.+.||.+.++......  .............     
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~  224 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEK--LIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTS--HHHHHHHHHHHTCCEEEE
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCccc--HHHHHHHHHHcCCCceEc
Confidence                      12346789999999999999998875   799999999999998754311  1111111222211     


Q ss_pred             ----CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          226 ----PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       226 ----~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                          +.+++..++|+|+++++++.+.   .+|+.+++++|..
T Consensus       225 ~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~  263 (361)
T 1kew_A          225 GKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNE  263 (361)
T ss_dssp             TTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCE
T ss_pred             CCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCe
Confidence                2235677899999999999643   4799999999864

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.92  E-value=3.3e-25  Score=192.03  Aligned_cols=223  Identities=15%  Similarity=0.118  Sum_probs=164.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChh--HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQN--MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++.. +.++.++.+|++|++++++++.     
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLED-DPRYTFVKGDVADYELVKELVR-----   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT-CTTEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc-CCceEEEEcCCCCHHHHHHHhh-----
Confidence            35689999999999999999999997  89999998642  11111 11111 3578899999999999888772     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------C
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------S  161 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~  161 (266)
                         ++|+|||+||....    +.+.+++++.+++|+.++.++++++.+.   ...++||++||...+.           +
T Consensus        75 ---~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~  144 (336)
T 2hun_A           75 ---KVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDR  144 (336)
T ss_dssp             ---TCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBC
T ss_pred             ---CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCC
Confidence               48999999997532    1234567889999999999999999765   2237999999976432           3


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC---------CCCCCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT---------PLARSAE  232 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  232 (266)
                      .++...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.....  ..............         +.+++..
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  219 (336)
T 2hun_A          145 LMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPE--KLIPKTIIRASLGLKIPIYGTGKNVRDWLY  219 (336)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCEEEETC---CEEEEE
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcC--chHHHHHHHHHcCCCceEeCCCCceeeeEE
Confidence            3456789999999999999998874   79999999999999875431  11111111222211         2245677


Q ss_pred             ccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          233 PNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       233 ~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ++|+|+++++++.+.   .+|+.+++++|..+
T Consensus       220 v~Dva~~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          220 VEDHVRAIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             HHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             HHHHHHHHHHHHhCC---CCCCEEEeCCCCcc
Confidence            899999999998643   47999999998643

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=3.9e-24  Score=186.94  Aligned_cols=232  Identities=15%  Similarity=0.071  Sum_probs=170.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+. .+.++.++++|++|++++.++++..     
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----
Confidence            3678999999999999999999999999999999998765544444332 2457889999999999999888754     


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC------------CC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI------------SI  162 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~------------~~  162 (266)
                       ++|+|||+||....    +.+.+++++.+++|+.++.++++++.+.   .+.++||++||...+.            +.
T Consensus        80 -~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~  151 (357)
T 1rkx_A           80 -QPEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAM  151 (357)
T ss_dssp             -CCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             -CCCEEEECCCCccc----ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCC
Confidence             58999999996321    1235668889999999999999998652   2257999999986432            22


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhc------cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC--------CC
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWA------TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP--------LA  228 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~------~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~  228 (266)
                      .+...|+.+|.+.+.+++.++.++.      +.|++++.+.||.+.++..... ...............+        ..
T Consensus       152 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~  230 (357)
T 1rkx_A          152 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPHAIR  230 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTTCEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-ccHHHHHHHHHhcCCCEEECCCCCee
Confidence            3467899999999999999999885      4589999999999999764321 1111111112211111        12


Q ss_pred             CCCCccchHHHHHHHhcCC--CCCccccEEEeCCC
Q 024551          229 RSAEPNEISPLVAFLCLPA--ASYITGQVISIDGG  261 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~~--~~~~~G~~l~vdgG  261 (266)
                      .+..++|+|++++.++...  .....|+.+++.+|
T Consensus       231 ~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          231 PWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             CCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             ccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            4567899999999887521  11235677888764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.92  E-value=6.2e-24  Score=171.21  Aligned_cols=198  Identities=13%  Similarity=0.091  Sum_probs=150.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|+++||||+++||++++++|+++|++|++++|+++..+..      ...++.++.+|++|++++.++++        .+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~--------~~   68 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA--------GQ   68 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT--------TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc--------CC
Confidence            47999999999999999999999999999999998754311      13578899999999998887764        37


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC----CchhhhhhHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP----RLSAYAASKG  173 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~----~~~~y~~sK~  173 (266)
                      |++||++|.....   +        ..++|+.++..+++++    ++.+.+++|++||...+...+    ....|+.+|.
T Consensus        69 d~vi~~a~~~~~~---~--------~~~~n~~~~~~~~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~  133 (206)
T 1hdo_A           69 DAVIVLLGTRNDL---S--------PTTVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (206)
T ss_dssp             SEEEECCCCTTCC---S--------CCCHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             CEEEECccCCCCC---C--------ccchHHHHHHHHHHHH----HHhCCCeEEEEeeeeeccCcccccccchhHHHHHH
Confidence            9999999975431   1        1247888887777766    444567999999987665444    5678999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcc-cCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAV-NTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++.+.+.       .|++++.+.||++ .++.... +....        ...|.+++.+++|+|+++++++.+.  ..+
T Consensus       134 ~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~-~~~~~--------~~~~~~~~i~~~Dva~~~~~~~~~~--~~~  195 (206)
T 1hdo_A          134 RMHKVLRE-------SGLKYVAVMPPHIGDQPLTGA-YTVTL--------DGRGPSRVISKHDLGHFMLRCLTTD--EYD  195 (206)
T ss_dssp             HHHHHHHH-------TCSEEEEECCSEEECCCCCSC-CEEES--------SSCSSCSEEEHHHHHHHHHHTTSCS--TTT
T ss_pred             HHHHHHHh-------CCCCEEEEeCCcccCCCCCcc-eEecc--------cCCCCCCccCHHHHHHHHHHHhcCc--ccc
Confidence            99998852       5899999999998 3433222 11110        1122257788999999999999764  378


Q ss_pred             ccEEEeCCCc
Q 024551          253 GQVISIDGGY  262 (266)
Q Consensus       253 G~~l~vdgG~  262 (266)
                      |+.+.++||+
T Consensus       196 g~~~~i~~g~  205 (206)
T 1hdo_A          196 GHSTYPSHQY  205 (206)
T ss_dssp             TCEEEEECCC
T ss_pred             ccceeeeccc
Confidence            9999999986

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.92  E-value=8.5e-25  Score=228.39  Aligned_cols=178  Identities=19%  Similarity=0.210  Sum_probs=144.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhH---HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNM---INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+|+++||||++|||+++|++|+++|++ |++++|+...   .++..+++.+.+.++.++.||++|+++++++++++.+ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence            7999999999999999999999999998 8888998643   3455666666678999999999999999999999875 


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|+||||||+...+++.+.+.++|++.+++|+.|++++.+++.+.|.+.  |+||++||.++..+.++...|+++|
T Consensus      1962 ~-g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~aaK 2038 (2512)
T 2vz8_A         1962 L-GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFAN 2038 (2512)
T ss_dssp             H-SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHHHH
T ss_pred             c-CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHHHH
Confidence            6 789999999999887889999999999999999999999999999988654  7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCccc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVN  202 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~  202 (266)
                      +++++|++..+.+    |+...++..|.+.
T Consensus      2039 aal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2039 SAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            9999999986654    7778888887664

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.92  E-value=4.7e-24  Score=185.13  Aligned_cols=223  Identities=15%  Similarity=0.042  Sum_probs=159.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+..+.  +.+...  ..++.++.+|++|++++.++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence            357999999999999999999999999999999998764321  122221  246889999999999999988765    


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-----------CCC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-----------ISI  162 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-----------~~~  162 (266)
                        ++|+||||||.....    .+.+++++.+++|+.++.++++++.+ +  ...++||++||...+           .+.
T Consensus        75 --~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~e~~~~  145 (345)
T 2z1m_A           75 --QPDEVYNLAAQSFVG----VSFEQPILTAEVDAIGVLRILEALRT-V--KPDTKFYQASTSEMFGKVQEIPQTEKTPF  145 (345)
T ss_dssp             --CCSEEEECCCCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHH-H--CTTCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             --CCCEEEECCCCcchh----hhhhCHHHHHHHHHHHHHHHHHHHHH-h--CCCceEEEEechhhcCCCCCCCCCccCCC
Confidence              589999999975321    12345788999999999999999874 2  113799999998543           233


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhc---cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc---------CCC-CC
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWA---TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK---------TPL-AR  229 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~-~~  229 (266)
                      ++...|+.+|.+.+.+++.++.+++   ..++.++.+.||...+.+..     ............         .+. +.
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (345)
T 2z1m_A          146 YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTR-----KITYSLARIKYGLQDKLVLGNLNAKRD  220 (345)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHH-----HHHHHHHHHHTTSCSCEEESCTTCEEC
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhH-----HHHHHHHHHHcCCCCeeeeCCCCceee
Confidence            4567899999999999999998876   33456778888876654311     001111111111         111 23


Q ss_pred             CCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          230 SAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       230 ~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      +..++|+|+++++++....    ++.+++.+|.
T Consensus       221 ~~~v~Dva~a~~~~~~~~~----~~~~~i~~~~  249 (345)
T 2z1m_A          221 WGYAPEYVEAMWLMMQQPE----PDDYVIATGE  249 (345)
T ss_dssp             CEEHHHHHHHHHHHHTSSS----CCCEEECCSC
T ss_pred             eEEHHHHHHHHHHHHhCCC----CceEEEeCCC
Confidence            7789999999999997543    3556666654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.92  E-value=4.3e-24  Score=184.88  Aligned_cols=235  Identities=16%  Similarity=0.077  Sum_probs=173.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHH-HCCCeEEEecCChh------------HHHHHHHHHHhcCCeeEEEeccCCCHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELA-RFGASVHTCGRDQN------------MINERIQEWESKGFKVTGSVCDLSFGDQ   81 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la-~~G~~v~~~~r~~~------------~~~~~~~~l~~~~~~~~~~~~D~~~~~~   81 (266)
                      ...+|++||||||+|||+|++.+|+ +.|+.++++++..+            ....+.+++++.|.++..+.||++|+++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4568999999999999999999999 68999999887543            2456677788889999999999999999


Q ss_pred             HHHHHHHHHhhcCCcccEEEecccccccc-------------C---------------------CCCCCHHHHHH---Hh
Q 024551           82 REKLIETVSSVFDGKLNILVNNAALVVMK-------------R---------------------ATEYTLEEYSS---VM  124 (266)
Q Consensus        82 i~~~~~~~~~~~~~~id~lv~~ag~~~~~-------------~---------------------~~~~~~~~~~~---~~  124 (266)
                      ++++++++.+.+ |++|+||||++.....             +                     +...+.++++.   .+
T Consensus       127 i~~vi~~i~~~~-G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM  205 (401)
T 4ggo_A          127 KAQVIEEAKKKG-IKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM  205 (401)
T ss_dssp             HHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc-CCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence            999999999998 8999999999965211             0                     11234555554   45


Q ss_pred             ccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc--hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCccc
Q 024551          125 STNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL--SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVN  202 (266)
Q Consensus       125 ~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~--~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~  202 (266)
                      ....++.|...+...+.|.+  ++++|.+|+.++....|.+  +.++.+|++|+..+|.++.+|++  ++++.++||.+.
T Consensus       206 g~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~v  281 (401)
T 4ggo_A          206 GGEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLV  281 (401)
T ss_dssp             SSHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCC
T ss_pred             hhhHHHHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCccc
Confidence            55566666777776666754  5799999998876655543  58999999999999999999985  899999999999


Q ss_pred             CCCCCCCccc-hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCC
Q 024551          203 TQISPPDLND-LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       203 t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      |+-..-..-- .+...+.+     .++..++-|.+.+.+..|..+. -|-++..+.+|+
T Consensus       282 T~AssaIP~~ply~~~l~k-----vmk~~g~heg~ieq~~rl~~~~-ly~~~~~~~~D~  334 (401)
T 4ggo_A          282 TRASAVIPVIPLYLASLFK-----VMKEKGNHEGCIEQITRLYAER-LYRKDGTIPVDE  334 (401)
T ss_dssp             CTTGGGSSSHHHHHHHHHH-----HHHHHTCCCCHHHHHHHHHHHT-TSCTTCCCCCCT
T ss_pred             cchhhcCCCchHHHHHHHH-----HHHhcCCCCchHHHHHHHHHHh-hccCCCCCCcCC
Confidence            9764432211 11111111     1334567889999998888642 222232344554

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.91  E-value=4.5e-24  Score=187.04  Aligned_cols=223  Identities=16%  Similarity=0.082  Sum_probs=157.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHH--CCCeEEEecCChhHHHHH-------HHHHHhcCCeeEEEeccCCCHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELAR--FGASVHTCGRDQNMINER-------IQEWESKGFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~--~G~~v~~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~D~~~~~~i~~   84 (266)
                      +++++|++|||||+|+||++++++|++  +|++|++++|+.......       .+.....+.++.++.+|++|++++++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            568899999999999999999999999  999999999966421100       01111124567899999999999887


Q ss_pred             HHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC--
Q 024551           85 LIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI--  162 (266)
Q Consensus        85 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~--  162 (266)
                      +      .. .++|+|||+||....      +.+++++.+++|+.++.++++++    ++.+ ++||++||...+...  
T Consensus        86 ~------~~-~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa----~~~~-~~~V~~SS~~vyg~~~~  147 (362)
T 3sxp_A           86 L------EK-LHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIA----RSKK-AKVIYASSAGVYGNTKA  147 (362)
T ss_dssp             H------TT-SCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEEEEGGGGCSCCS
T ss_pred             h------hc-cCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEeCcHHHhCCCCC
Confidence            6      12 579999999996533      33457889999999999999888    3433 569999996544322  


Q ss_pred             --------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chhHHHHHHHHhcCC------
Q 024551          163 --------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLLVQEYVKLIAKTP------  226 (266)
Q Consensus       163 --------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~------  226 (266)
                              .+...|+.+|.+.+.+++.++.+     +++..+.|+.+..+.......  ..............+      
T Consensus       148 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (362)
T 3sxp_A          148 PNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEF  222 (362)
T ss_dssp             SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGG
T ss_pred             CCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECC
Confidence                    22456999999999999987655     778888888887665432211  111111122222222      


Q ss_pred             ---CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          227 ---LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       227 ---~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                         ...+..++|+|+++++++....   +| .+++.+|..
T Consensus       223 g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~  258 (362)
T 3sxp_A          223 GEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQA  258 (362)
T ss_dssp             GCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCE
T ss_pred             CCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCC
Confidence               2245668999999999997543   68 899988754

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.91  E-value=1.1e-23  Score=188.77  Aligned_cols=222  Identities=12%  Similarity=0.043  Sum_probs=160.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh---HHHHHHHHHHh---------cCCeeEEEeccCCCHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN---MINERIQEWES---------KGFKVTGSVCDLSFGDQ   81 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~---~~~~~~~~l~~---------~~~~~~~~~~D~~~~~~   81 (266)
                      ....+|++|||||+|+||++++++|+++|++|++++|+++   ..+.+.+.+..         ...++.++.+|++|+++
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            3456789999999999999999999999999999999877   44444443322         23678999999999888


Q ss_pred             HHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC---
Q 024551           82 REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG---  158 (266)
Q Consensus        82 i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~---  158 (266)
                      +.        .+ +++|+||||||...       ..+++++.+++|+.++.++++++.+     +..+||++||...   
T Consensus       145 l~--------~~-~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~  203 (427)
T 4f6c_A          145 VV--------LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTY  203 (427)
T ss_dssp             CC--------CS-SCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSE
T ss_pred             CC--------Cc-CCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCC
Confidence            77        33 67999999999753       2356788999999999999999865     3579999999886   


Q ss_pred             ---------------CCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-----hHHHH
Q 024551          159 ---------------AISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-----LVQEY  218 (266)
Q Consensus       159 ---------------~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-----~~~~~  218 (266)
                                     ..+......|+.+|.+.+.+++.++.    +|++++.+.||.+.++.....+...     .....
T Consensus       204 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~  279 (427)
T 4f6c_A          204 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVM  279 (427)
T ss_dssp             ECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHH
T ss_pred             ccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHH
Confidence                           00122568999999999999998653    6899999999999987655432111     11111


Q ss_pred             HHHHhcC--------CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          219 VKLIAKT--------PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       219 ~~~~~~~--------~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      .......        ....+..++|+|+++++++....   .|+.+++++|..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~  329 (427)
T 4f6c_A          280 NDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNK  329 (427)
T ss_dssp             HHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCC
T ss_pred             HHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCC
Confidence            2222211        12346778999999999996543   899999998764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.91  E-value=7.9e-24  Score=183.61  Aligned_cols=223  Identities=16%  Similarity=0.090  Sum_probs=155.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc---CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK---GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+..++... +.+.   ..++.++++|++|+++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            578999999999999999999999999999999998764433322 1111   1257889999999998877664     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC----------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI----------  162 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~----------  162 (266)
                         .+|+|||+|+...   ...  .+..++.+++|+.++.++++++.+..   ..++||++||.++..+.          
T Consensus        77 ---~~d~Vih~A~~~~---~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~  145 (337)
T 2c29_D           77 ---GCTGVFHVATPMD---FES--KDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDES  145 (337)
T ss_dssp             ---TCSEEEECCCCCC---SSC--SSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTT
T ss_pred             ---CCCEEEEeccccC---CCC--CChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcc
Confidence               3799999998542   111  12235689999999999999886532   24799999998754321          


Q ss_pred             ------------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHH------Hhc
Q 024551          163 ------------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKL------IAK  224 (266)
Q Consensus       163 ------------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~------~~~  224 (266)
                                  +....|+.||.+.+.+++.++.+   +|++++.+.||.+.++.................      ...
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~  222 (337)
T 2c29_D          146 CWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSI  222 (337)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHH
T ss_pred             cCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccc
Confidence                        12346999999999998877654   479999999999999875543322111100000      001


Q ss_pred             CCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCC
Q 024551          225 TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       225 ~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      .+..++..++|+|+++++++...  ..+|.++..++
T Consensus       223 ~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~~  256 (337)
T 2c29_D          223 IRQGQFVHLDDLCNAHIYLFENP--KAEGRYICSSH  256 (337)
T ss_dssp             HTEEEEEEHHHHHHHHHHHHHCT--TCCEEEEECCE
T ss_pred             cCCCCEEEHHHHHHHHHHHhcCc--ccCceEEEeCC
Confidence            12345889999999999998542  34566544333

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=1.9e-22  Score=178.92  Aligned_cols=230  Identities=13%  Similarity=0.040  Sum_probs=161.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHH-----------------HHHHHHHhcCCeeEEEeccCC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN-----------------ERIQEWESKGFKVTGSVCDLS   77 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~-----------------~~~~~l~~~~~~~~~~~~D~~   77 (266)
                      ..+++++|||||+|.||++++++|+++|++|++++|+.....                 .+.+.....+.++.++.+|++
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            357899999999999999999999999999999998754321                 121111122457889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCC-CeEEEEecC
Q 024551           78 FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGN-ASIVFMSSV  156 (266)
Q Consensus        78 ~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~vss~  156 (266)
                      |+++++++++..      ++|+|||+||........ .+.++++..+++|+.++.++++++.+    .+. .+||++||.
T Consensus        88 d~~~~~~~~~~~------~~D~Vih~A~~~~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~~~V~~SS~  156 (404)
T 1i24_A           88 DFEFLAESFKSF------EPDSVVHFGEQRSAPYSM-IDRSRAVYTQHNNVIGTLNVLFAIKE----FGEECHLVKLGTM  156 (404)
T ss_dssp             SHHHHHHHHHHH------CCSEEEECCSCCCHHHHT-SCHHHHHHHHHHHHHHHHHHHHHHHH----HCTTCEEEEECCG
T ss_pred             CHHHHHHHHhcc------CCCEEEECCCCCCccchh-hCccchhhhHHHHHHHHHHHHHHHHH----hCCCcEEEEeCcH
Confidence            999998888754      589999999975432222 26677888999999999999998854    233 499999997


Q ss_pred             CCCC------------------------CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc--
Q 024551          157 AGAI------------------------SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL--  210 (266)
Q Consensus       157 ~~~~------------------------~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~--  210 (266)
                      +.+.                        +..+...|+.||.+.+.+++.++.++   |++++.+.||.+.++......  
T Consensus       157 ~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~  233 (404)
T 1i24_A          157 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMH  233 (404)
T ss_dssp             GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGS
T ss_pred             HHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCccccc
Confidence            6442                        22345689999999999999998875   799999999999987643210  


Q ss_pred             -------------cchhHHHHHHHHhcCC---------CCCCCCccchHHHHHHHhcCCCCCccc--cEEEeCC
Q 024551          211 -------------NDLLVQEYVKLIAKTP---------LARSAEPNEISPLVAFLCLPAASYITG--QVISIDG  260 (266)
Q Consensus       211 -------------~~~~~~~~~~~~~~~~---------~~~~~~~~eia~~~~~l~s~~~~~~~G--~~l~vdg  260 (266)
                                   ...............+         .+.+..++|+|++++.++....  ..|  +.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          234 EELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             GGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             cccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence                         1111111122222211         1235668999999999885432  245  6777754

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.91  E-value=2.4e-23  Score=183.67  Aligned_cols=226  Identities=16%  Similarity=0.067  Sum_probs=165.3

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .++.+..++|++|||||+|+||++++++|+++|++|++++|+.+.....      ...++.++.+|++|++++.++++  
T Consensus        21 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~--   92 (379)
T 2c5a_A           21 REQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE--   92 (379)
T ss_dssp             CCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT--
T ss_pred             ccccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC--
Confidence            3444556779999999999999999999999999999999986542211      12367889999999998887764  


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC---------
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI---------  160 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~---------  160 (266)
                            .+|+|||+||......+   +.+++++.+++|+.++.++++++.    +.+.++||++||...+.         
T Consensus        93 ------~~d~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v~~~~~~~~~~~  159 (379)
T 2c5a_A           93 ------GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACIYPEFKQLETTN  159 (379)
T ss_dssp             ------TCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGGSCGGGSSSSSS
T ss_pred             ------CCCEEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehheeCCCCCCCccC
Confidence                  48999999997532211   123477889999999999998884    44557999999976543         


Q ss_pred             ---------CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--hhHHHHHHHHhcCC---
Q 024551          161 ---------SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--LLVQEYVKLIAKTP---  226 (266)
Q Consensus       161 ---------~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~---  226 (266)
                               +..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++........  .............+   
T Consensus       160 ~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (379)
T 2c5a_A          160 VSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE  236 (379)
T ss_dssp             CEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEE
T ss_pred             CCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceE
Confidence                     22345689999999999999998764   79999999999998865432110  11111122222211   


Q ss_pred             -------CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          227 -------LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       227 -------~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                             ...+..++|+|+++++++...    .|+.+++.+|..
T Consensus       237 ~~g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~  276 (379)
T 2c5a_A          237 MWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  276 (379)
T ss_dssp             EESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCC
T ss_pred             EeCCCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCc
Confidence                   234566899999999999653    467888888754

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.91  E-value=1.3e-23  Score=180.19  Aligned_cols=216  Identities=19%  Similarity=0.124  Sum_probs=158.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      ++|||||+|+||++++++|+++|++|++++|......   +   ....++.++.+|++|++++++++++.      .+|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~---~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~   69 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---E---NVPKGVPFFRVDLRDKEGVERAFREF------RPTH   69 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---G---GSCTTCCEECCCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---h---hcccCeEEEECCCCCHHHHHHHHHhc------CCCE
Confidence            6999999999999999999999999999998543111   0   11135678899999999998887642      5899


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecC-CCCC------------CCCCch
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSV-AGAI------------SIPRLS  166 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~-~~~~------------~~~~~~  166 (266)
                      +||+|+.....    .+.+++++.+++|+.+++++++++.    +.+.++||++||. ..+.            +..+..
T Consensus        70 vi~~a~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~  141 (311)
T 2p5y_A           70 VSHQAAQASVK----VSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS  141 (311)
T ss_dssp             EEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred             EEECccccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence            99999965321    2446678899999999999998874    4445799999997 2111            112456


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHH-HHHHHhcC--------------CCCCCC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQE-YVKLIAKT--------------PLARSA  231 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~--------------~~~~~~  231 (266)
                      .|+.+|++.+.+++.++.++   |++++.+.||.+.++............. ........              +.+.+.
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  218 (311)
T 2p5y_A          142 PYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYV  218 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEE
T ss_pred             hHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeE
Confidence            89999999999999998774   7999999999999986543321111111 11121111              123456


Q ss_pred             CccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          232 EPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       232 ~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      .++|+|+++++++...     |+.+++++|..
T Consensus       219 ~v~Dva~a~~~~~~~~-----~~~~~i~~~~~  245 (311)
T 2p5y_A          219 YVGDVAEAHALALFSL-----EGIYNVGTGEG  245 (311)
T ss_dssp             EHHHHHHHHHHHHHHC-----CEEEEESCSCC
T ss_pred             EHHHHHHHHHHHHhCC-----CCEEEeCCCCC
Confidence            7899999999998642     88999998864

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.91  E-value=9.5e-23  Score=177.67  Aligned_cols=230  Identities=14%  Similarity=0.111  Sum_probs=170.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-----CeeEEEeccCCCHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-----FKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      +.+++|++|||||+|.||++++++|+++|++|++++|+........+.+....     .++.++.+|++|++++.++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            55789999999999999999999999999999999997654444444443321     578999999999998877665 


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-----
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-----  163 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-----  163 (266)
                             .+|+|||+||.....    .+.+++++.+++|+.++.++++++    ++.+.+++|++||...+...+     
T Consensus       100 -------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~  164 (351)
T 3ruf_A          100 -------GVDHVLHQAALGSVP----RSIVDPITTNATNITGFLNILHAA----KNAQVQSFTYAASSSTYGDHPALPKV  164 (351)
T ss_dssp             -------TCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             -------CCCEEEECCccCCcc----hhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEecHHhcCCCCCCCCc
Confidence                   489999999965321    134557788999999999998887    444557999999987654322     


Q ss_pred             ------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chhHHHHHHHHhcCCC--------
Q 024551          164 ------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLLVQEYVKLIAKTPL--------  227 (266)
Q Consensus       164 ------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~--------  227 (266)
                            +...|+.+|.+.+.+++.++.+.   |++++.+.|+.+..+.......  ..............+.        
T Consensus       165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  241 (351)
T 3ruf_A          165 EENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGET  241 (351)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred             cCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCe
Confidence                  25689999999999999998875   7999999999999876543211  1111111222222222        


Q ss_pred             -CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          228 -ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       228 -~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                       ..+..++|+|+++++++... ....|+.+++.+|..
T Consensus       242 ~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~  277 (351)
T 3ruf_A          242 SRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDR  277 (351)
T ss_dssp             EECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCC
T ss_pred             EEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCc
Confidence             24566899999999888542 346789999988754

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.90  E-value=1e-23  Score=182.95  Aligned_cols=209  Identities=12%  Similarity=0.114  Sum_probs=153.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +++|||||+|+||++++++|+++|++|++++|+++..+.+    ..  .++.++.+|++|++++.++++        .+|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~Dl~d~~~~~~~~~--------~~d   79 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY--LEPECRVAEMLDHAGLERALR--------GLD   79 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG--GCCEEEECCTTCHHHHHHHTT--------TCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc--CCeEEEEecCCCHHHHHHHHc--------CCC
Confidence            4899999999999999999999999999999987654322    11  267888999999988877664        489


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC--------------
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR--------------  164 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~--------------  164 (266)
                      +|||+||...      ...+++++.+++|+.++.++++++.+    .+.++||++||...+...+.              
T Consensus        80 ~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           80 GVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQ----ARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             EEEEC------------------CHHHHHHHHHHHHHHHHHH----HTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             EEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            9999999643      13456788999999999999998865    34579999999887654443              


Q ss_pred             --chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCC-CCCccchhHHHHHHHHhcCCC----C--CCCCccc
Q 024551          165 --LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQIS-PPDLNDLLVQEYVKLIAKTPL----A--RSAEPNE  235 (266)
Q Consensus       165 --~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~-~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~e  235 (266)
                        ...|+.+|.+.+.+++.++.   . |++++.+.||.+.++.. .... ....   .......+.    .  .+..++|
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~i~v~D  221 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTT-GRVI---TAIGNGEMTHYVAGQRNVIDAAE  221 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCST-THHH---HHHHTTCCCEEECCEEEEEEHHH
T ss_pred             cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccH-HHHH---HHHHcCCCccccCCCcceeeHHH
Confidence              67899999999999999875   3 79999999999998865 3111 1111   222222211    2  3568899


Q ss_pred             hHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          236 ISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       236 ia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      +|+++++++....   .|+.+++++|.
T Consensus       222 va~~~~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          222 AGRGLLMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             HHHHHHHHHHHSC---TTCEEEECCEE
T ss_pred             HHHHHHHHHhCCC---CCceEEEcCCc
Confidence            9999999996543   28899999885

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.90  E-value=4.2e-24  Score=183.22  Aligned_cols=215  Identities=19%  Similarity=0.104  Sum_probs=160.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |++|||||+|+||++++++|+++|++|++++|+.+...+.      ....+.++.+|++|.+ +.++++       +  |
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~~-------~--d   64 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGIK-------G--D   64 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTCC-------C--S
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhcC-------C--C
Confidence            5799999999999999999999999999999976543211      1356888999999987 544332       3  9


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------CCCCchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------SIPRLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~~~~~~~  167 (266)
                      +|||+|+....    ..+.++++..+++|+.++.++++++.    +.+.++||++||...+.           +..+...
T Consensus        65 ~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~  136 (312)
T 3ko8_A           65 VVFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWAR----QTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISV  136 (312)
T ss_dssp             EEEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence            99999996432    23445677889999999999998883    44567999999987653           2334678


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc-C---------CCCCCCCccchH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK-T---------PLARSAEPNEIS  237 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~eia  237 (266)
                      |+.+|.+.+.+++.++.++   |++++.+.||.+.++...........   ...... .         ....+..++|+|
T Consensus       137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  210 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFI---MKLRRNPNVLEVLGDGTQRKSYLYVRDAV  210 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHH---HHHHHCTTEEEEC----CEECEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHH---HHHHhCCCCeEEcCCCCeEEeeEEHHHHH
Confidence            9999999999999999886   79999999999999875542211111   122111 1         112456689999


Q ss_pred             HHHHHHhcC-CCCCccccEEEeCCCcc
Q 024551          238 PLVAFLCLP-AASYITGQVISIDGGYT  263 (266)
Q Consensus       238 ~~~~~l~s~-~~~~~~G~~l~vdgG~~  263 (266)
                      +++++++.. ......|+.+++.+|..
T Consensus       211 ~a~~~~~~~~~~~~~~~~~~ni~~~~~  237 (312)
T 3ko8_A          211 EATLAAWKKFEEMDAPFLALNVGNVDA  237 (312)
T ss_dssp             HHHHHHHHHHHHSCCSEEEEEESCSSC
T ss_pred             HHHHHHHHhccccCCCCcEEEEcCCCc
Confidence            999999864 22345789999988764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.90  E-value=2.3e-23  Score=180.57  Aligned_cols=216  Identities=14%  Similarity=-0.008  Sum_probs=154.1

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ...+++|++|||||+|+||++++++|+++|++|++++|+.+...+   .+... .++.++.+|++|+++++++++.    
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~~-~~~~~~~~Dl~d~~~~~~~~~~----   87 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKDH-PNLTFVEGSIADHALVNQLIGD----   87 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCCC-TTEEEEECCTTCHHHHHHHHHH----
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhhc-CCceEEEEeCCCHHHHHHHHhc----
Confidence            344678999999999999999999999999999999997543211   11111 3688899999999999888874    


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC----CC------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI----SI------  162 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~----~~------  162 (266)
                        +++|+|||+||.....     +.++++  +++|+.++.++++++.+    .+.++||++||...+.    ..      
T Consensus        88 --~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E  154 (333)
T 2q1w_A           88 --LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDH  154 (333)
T ss_dssp             --HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTS
T ss_pred             --cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCC
Confidence              2699999999976432     234454  99999999999998854    4457999999987653    21      


Q ss_pred             --CCc-hhhhhhHHHHHHHHHH-HHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc------CCCCCCCC
Q 024551          163 --PRL-SAYAASKGAINQLTKN-LACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK------TPLARSAE  232 (266)
Q Consensus       163 --~~~-~~y~~sK~al~~~~~~-~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  232 (266)
                        .+. ..|+.+|.+.+.+++. ++        ++..+.|+.+..+...........   ......      .+..++..
T Consensus       155 ~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~  223 (333)
T 2q1w_A          155 PRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFF---QRLSEGKKCFVTKARRDFVF  223 (333)
T ss_dssp             CCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHH---HHHHTTCCCEEEECEECEEE
T ss_pred             CCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHH---HHHHcCCeeeCCCceEeeEE
Confidence              234 7899999999999987 54        567788887776652111111111   111111      12346678


Q ss_pred             ccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          233 PNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       233 ~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ++|+|+++++++....    |+.+++++|..+
T Consensus       224 v~Dva~ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          224 VKDLARATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             HHHHHHHHHHHHTTCC----CEEEECSCSCCE
T ss_pred             HHHHHHHHHHHHhcCC----CCEEEeCCCCCc
Confidence            9999999999997543    899999988643

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.90  E-value=6.1e-23  Score=178.56  Aligned_cols=226  Identities=17%  Similarity=0.134  Sum_probs=159.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      +.+++|++|||||+|+||++++++|+++|  ++|+..+|.....  ..+.+...  ..++.++.+|++|++++.++++..
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            45788999999999999999999999999  7787777754211  01111111  247899999999999999988753


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-------
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-------  162 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-------  162 (266)
                            ++|+|||+|+.....    ...+++++.+++|+.++..+++++    ++.+.+++|++||...+...       
T Consensus        98 ------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vy~~~~~~~~~~  163 (346)
T 4egb_A           98 ------DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELV----KKYPHIKLVQVSTDEVYGSLGKTGRFT  163 (346)
T ss_dssp             ------TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHH----HHSTTSEEEEEEEGGGGCCCCSSCCBC
T ss_pred             ------CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCEEEEeCchHHhCCCCcCCCcC
Confidence                  589999999976432    144667889999999999998887    44456799999997654432       


Q ss_pred             -----CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC---------C
Q 024551          163 -----PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL---------A  228 (266)
Q Consensus       163 -----~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~  228 (266)
                           .+...|+.+|.+.+.+++.++.+.   |++++.+.||.+.++.....  ..............+.         .
T Consensus       164 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
T 4egb_A          164 EETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPE--KLIPLMVTNALEGKKLPLYGDGLNVR  238 (346)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCCEEETTSCCEE
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCcc--chHHHHHHHHHcCCCceeeCCCCeEE
Confidence                 124789999999999999998774   79999999999998765432  1111111222222222         1


Q ss_pred             CCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          229 RSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      .+..++|+|+++++++....   .|+.+++.+|..
T Consensus       239 ~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~  270 (346)
T 4egb_A          239 DWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNE  270 (346)
T ss_dssp             CEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCC
T ss_pred             eeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCc
Confidence            33457899999999996543   799999998864

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.90  E-value=2.2e-23  Score=181.44  Aligned_cols=219  Identities=15%  Similarity=0.083  Sum_probs=156.0

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++++.+.++|++|||||+|+||++++++|+++|++|++++|+.+.            .++.++.+|++|.+++.++++  
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~--   76 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM--   76 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT--
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh--
Confidence            345566899999999999999999999999999999999998754            467889999999999887765  


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC--------
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS--------  161 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~--------  161 (266)
                            .+|+|||+|+....      +.+.+++.+++|+.++.++++++.    +.+.++||++||...+..        
T Consensus        77 ------~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~V~~SS~~vyg~~~~~~~~~  140 (347)
T 4id9_A           77 ------GVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAAS----AAGVRRFVFASSGEVYPENRPEFLPV  140 (347)
T ss_dssp             ------TCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEGGGTTTTSCSSSSB
T ss_pred             ------CCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEECCHHHhCCCCCCCCCc
Confidence                  58999999996533      334458899999999999988873    455679999999665432        


Q ss_pred             -----CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccC-------------CCCCCCc--------cchhH
Q 024551          162 -----IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNT-------------QISPPDL--------NDLLV  215 (266)
Q Consensus       162 -----~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t-------------~~~~~~~--------~~~~~  215 (266)
                           ..+...|+.+|.+.+.+++.++.+   .|++++.+.|+.+.+             +......        .....
T Consensus       141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~  217 (347)
T 4id9_A          141 TEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAI  217 (347)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHH
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHH
Confidence                 235678999999999999998877   489999999999872             1100000        00111


Q ss_pred             HHH-HHHHhcCC---------CCCC----CCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          216 QEY-VKLIAKTP---------LARS----AEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       216 ~~~-~~~~~~~~---------~~~~----~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ..+ .......+         .+.+    ..++|+|+++++++....  ..|+.+++.+|..
T Consensus       218 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~  277 (347)
T 4id9_A          218 AELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEP  277 (347)
T ss_dssp             HHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSC
T ss_pred             HHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCc
Confidence            111 11111112         1233    678999999999996542  4588999988764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.90  E-value=9.7e-23  Score=177.32  Aligned_cols=230  Identities=16%  Similarity=0.131  Sum_probs=161.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH------HHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM------INERIQEWES-KGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~------~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +|++|||||+|+||++++++|+++|++|++++|+...      ..+..+.+.+ .+.++.++.+|++|++++++++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence            5899999999999999999999999999999875432      1222233332 245788999999999998888764  


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC---------
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS---------  161 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~---------  161 (266)
                        +  ++|+|||+||......    +.+++++.+++|+.++.++++++    ++.+.++||++||...+..         
T Consensus        80 --~--~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~E~  147 (348)
T 1ek6_A           80 --Y--SFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEA  147 (348)
T ss_dssp             --C--CEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             --c--CCCEEEECCCCcCccc----hhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCCCCCCcCCC
Confidence              1  5999999999754321    34567889999999999998865    4455679999999876431         


Q ss_pred             ---CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCC----CCCc---cchhHHHHHHHHh--cC----
Q 024551          162 ---IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQIS----PPDL---NDLLVQEYVKLIA--KT----  225 (266)
Q Consensus       162 ---~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~----~~~~---~~~~~~~~~~~~~--~~----  225 (266)
                         .|....|+.+|.+.+.+++.++.+  ..++++..+.|+.+..+..    .+..   .............  ..    
T Consensus       148 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (348)
T 1ek6_A          148 HPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (348)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEE
Confidence               123678999999999999999887  3469999999998876632    1110   0111111112111  11    


Q ss_pred             -----------CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          226 -----------PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       226 -----------~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                                 ....+..++|+|++++.++........++.+++.+|..
T Consensus       226 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~  274 (348)
T 1ek6_A          226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG  274 (348)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC
T ss_pred             eCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCC
Confidence                       11245678999999998885321122248888877653

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.90  E-value=1e-22  Score=179.48  Aligned_cols=228  Identities=15%  Similarity=0.019  Sum_probs=157.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-----HHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-----INERIQEWESKGF-KVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-----~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.+...+. ++.++.+|++|++++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999997653     3322222222223 6889999999999999888754   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCCCC----------C
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAGAI----------S  161 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~~~----------~  161 (266)
                         ++|+|||+||.....    .+.++++..+++|+.++..+++++.+...++ +.++||++||...+.          +
T Consensus       106 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence               589999999975431    2356688999999999999999999876542 346999999987543          2


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHH-HHHHHHhc----------CCCCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ-EYVKLIAK----------TPLARS  230 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~  230 (266)
                      ..+...|+.+|.+.+.+++.++.++   |+.+..+.|..+..+.....+...... ........          .....+
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence            3446789999999999999998875   344444444433333222111111111 11111111          112346


Q ss_pred             CCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          231 AEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ..++|+|+++++++....    ++.+++.+|..
T Consensus       256 v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~  284 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQEK----PDDYVVATEEG  284 (381)
T ss_dssp             EEHHHHHHHHHHHHTSSS----CCEEEECCSCE
T ss_pred             EEHHHHHHHHHHHHhCCC----CCeEEeeCCCC
Confidence            778999999999996543    46788887753

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.90  E-value=8.4e-23  Score=180.89  Aligned_cols=172  Identities=19%  Similarity=0.160  Sum_probs=136.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHH-HCCCeEEEecCChhH---------HHHHHHHHHhcC-----Ce---eEEEeccCCCH
Q 024551           18 GMTALVTGGTRGIGYAIVEELA-RFGASVHTCGRDQNM---------INERIQEWESKG-----FK---VTGSVCDLSFG   79 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la-~~G~~v~~~~r~~~~---------~~~~~~~l~~~~-----~~---~~~~~~D~~~~   79 (266)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+.+..     .+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 999999999987543         344433333321     24   88999999999


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA  159 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~  159 (266)
                      +++++++++    + +++|+|||+||......    +.+++++.+++|+.++.++++++    ++.+.++||++||.+.+
T Consensus        82 ~~~~~~~~~----~-~~~d~vih~A~~~~~~~----~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~SS~~v~  148 (397)
T 1gy8_A           82 DFLNGVFTR----H-GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF  148 (397)
T ss_dssp             HHHHHHHHH----S-CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT
T ss_pred             HHHHHHHHh----c-CCCCEEEECCCccCcCc----chhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEECCHHHh
Confidence            998887764    3 56999999999764321    34567889999999999998876    44456799999997654


Q ss_pred             CCCC------------------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCC
Q 024551          160 ISIP------------------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQI  205 (266)
Q Consensus       160 ~~~~------------------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~  205 (266)
                      ....                  +...|+.+|.+.+.+++.++.++   |++++.+.||.+..+.
T Consensus       149 g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             CCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            3222                  25789999999999999999886   7999999999998775

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.90  E-value=2.2e-23  Score=181.39  Aligned_cols=218  Identities=17%  Similarity=0.140  Sum_probs=161.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHC--CCeEEEecCChhH-HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           19 MTALVTGGTRGIGYAIVEELARF--GASVHTCGRDQNM-INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~--G~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      |++|||||+|+||++++++|+++  |++|++++|+... ..+..+.+  ...++.++.+|++|+++++++++        
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~--------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA--------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT--------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh--------
Confidence            68999999999999999999999  8999999986421 01111111  13578899999999998877765        


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC---------------
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI---------------  160 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~---------------  160 (266)
                      .+|+|||+||....    +.+.+++++.+++|+.++.++++++.+.    + ++||++||...+.               
T Consensus        75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~  145 (348)
T 1oc2_A           75 KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP  145 (348)
T ss_dssp             TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence            36999999997532    1234557789999999999999998654    3 4999999976432               


Q ss_pred             --------CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC-------
Q 024551          161 --------SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-------  225 (266)
Q Consensus       161 --------~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-------  225 (266)
                              +.++...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.....  ..............       
T Consensus       146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~  220 (348)
T 1oc2_A          146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGE  220 (348)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTT--SHHHHHHHHHHHTCCCEEETT
T ss_pred             CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCcc--chHHHHHHHHHcCCCceEecC
Confidence                    22345789999999999999998875   79999999999999875421  11111111222221       


Q ss_pred             --CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          226 --PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       226 --~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                        +...+..++|+|+++++++.+.   .+|+.+++++|..
T Consensus       221 ~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~  257 (348)
T 1oc2_A          221 GKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGE  257 (348)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCE
T ss_pred             CCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCC
Confidence              1235677899999999998643   4799999998864

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.90  E-value=8.2e-23  Score=180.06  Aligned_cols=223  Identities=15%  Similarity=0.083  Sum_probs=161.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ..+++|+++||||+|+||++++++|+++| ++|++++|+.+...+   .+. ...++.++.+|++|+++++++++     
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~-----   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD-----   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS-----
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh-----
Confidence            35789999999999999999999999999 999999997653211   111 13578899999999988766543     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCCCC-----------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAGAI-----------  160 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~~~-----------  160 (266)
                         .+|+|||+||.....    .+.+++++.+++|+.++.++++++    ++. +.++||++||...+.           
T Consensus        99 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E  167 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAKATE  167 (377)
T ss_dssp             ---CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--------------C
T ss_pred             ---CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcCccc
Confidence               589999999975321    134567889999999999998887    444 457999999976431           


Q ss_pred             -----CC-CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCC---------CCCc--cchhHHHHHHHHh
Q 024551          161 -----SI-PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQIS---------PPDL--NDLLVQEYVKLIA  223 (266)
Q Consensus       161 -----~~-~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~---------~~~~--~~~~~~~~~~~~~  223 (266)
                           +. .+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++..         ....  .............
T Consensus       168 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  244 (377)
T 2q1s_A          168 ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALK  244 (377)
T ss_dssp             CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHT
T ss_pred             ccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHc
Confidence                 11 345789999999999999998774   79999999999998765         2100  1111111122222


Q ss_pred             cCCC---------CCCCCccchHHH-HHHHhcCCCCCccccEEEeCCCcc
Q 024551          224 KTPL---------ARSAEPNEISPL-VAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       224 ~~~~---------~~~~~~~eia~~-~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ..+.         ..+..++|+|++ +++++....   +| .+++.+|..
T Consensus       245 g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~  290 (377)
T 2q1s_A          245 GMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKE  290 (377)
T ss_dssp             TCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCC
T ss_pred             CCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCc
Confidence            2222         234558999999 999886532   78 899988753

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.90  E-value=5e-23  Score=177.20  Aligned_cols=219  Identities=18%  Similarity=0.134  Sum_probs=147.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHH--HHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINER--IQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ||++|||||+|+||++++++|+++|++|+++.| +++..+..  ...+.....++.++++|++|+++++++++       
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE-------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-------
Confidence            689999999999999999999999999999988 65321111  01111111257888999999998887765       


Q ss_pred             CcccEEEeccccccccCCCCCCHHH-HHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC----------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEE-YSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP----------  163 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~----------  163 (266)
                       .+|+|||+|+..   .   ...++ +++.+++|+.+++++++++.+.   .+.++||++||..+..+.+          
T Consensus        74 -~~d~vih~A~~~---~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~~  143 (322)
T 2p4h_X           74 -GCVGIFHTASPI---D---FAVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDESD  143 (322)
T ss_dssp             -TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTTC
T ss_pred             -CCCEEEEcCCcc---c---CCCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCcc
Confidence             379999999642   1   12222 4568999999999999988542   1357999999987543221          


Q ss_pred             ------------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc----CCC
Q 024551          164 ------------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK----TPL  227 (266)
Q Consensus       164 ------------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~  227 (266)
                                  ....|+.||.+.+.+++.++.+   +|++++.++||.+.+++........ ..........    .+.
T Consensus       144 ~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~-~~~~~~~~~g~~~~~~~  219 (322)
T 2p4h_X          144 WSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDS-IEKALVLVLGKKEQIGV  219 (322)
T ss_dssp             CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHH-HHHHTHHHHSCGGGCCE
T ss_pred             ccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCch-HHHHHHHHhCCCccCcC
Confidence                        1116999999888877765543   5899999999999998765432221 1111111111    111


Q ss_pred             C--CCCCccchHHHHHHHhcCCCCCccccEEEeCC
Q 024551          228 A--RSAEPNEISPLVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       228 ~--~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      .  .+..++|+|+++++++...  ..+|++ ++.+
T Consensus       220 ~~~~~i~v~Dva~a~~~~~~~~--~~~g~~-~~~~  251 (322)
T 2p4h_X          220 TRFHMVHVDDVARAHIYLLENS--VPGGRY-NCSP  251 (322)
T ss_dssp             EEEEEEEHHHHHHHHHHHHHSC--CCCEEE-ECCC
T ss_pred             CCcCEEEHHHHHHHHHHHhhCc--CCCCCE-EEcC
Confidence            1  3678999999999999642  257874 3443

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.89  E-value=5.1e-23  Score=176.70  Aligned_cols=212  Identities=17%  Similarity=0.090  Sum_probs=155.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |++|||||+|+||++++++|+++|..|++..|+....+       .....+.++.+|++| +++.++++        .+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~-------~~~~~~~~~~~Dl~~-~~~~~~~~--------~~d   65 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE-------FVNEAARLVKADLAA-DDIKDYLK--------GAE   65 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG-------GSCTTEEEECCCTTT-SCCHHHHT--------TCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh-------hcCCCcEEEECcCCh-HHHHHHhc--------CCC
Confidence            57999999999999999999999955555555443221       113468899999999 77776654        589


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------CCCCchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------SIPRLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~~~~~~~  167 (266)
                      ++||+|+....    ..+.+++++.+++|+.++.++++++    ++.+.++||++||...+.           +..+...
T Consensus        66 ~vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~  137 (313)
T 3ehe_A           66 EVWHIAANPDV----RIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL  137 (313)
T ss_dssp             EEEECCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence            99999995422    2344567889999999999998876    444567999999977652           3345678


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc-C---------CCCCCCCccchH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK-T---------PLARSAEPNEIS  237 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~eia  237 (266)
                      |+.+|.+.+.+++.++.++   |++++.+.|+.+.++......-....   ...... .         ....+..++|+|
T Consensus       138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  211 (313)
T 3ehe_A          138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFI---MKLKRNPEELEILGNGEQNKSYIYISDCV  211 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHH---HHHHHCTTEEEESTTSCCEECCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHH---HHHHcCCCceEEeCCCCeEEeEEEHHHHH
Confidence            9999999999999998874   79999999999998765432111111   121111 1         123466789999


Q ss_pred             HHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          238 PLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +++++++.+   ...|+.+++.+|..
T Consensus       212 ~a~~~~~~~---~~~~~~~ni~~~~~  234 (313)
T 3ehe_A          212 DAMLFGLRG---DERVNIFNIGSEDQ  234 (313)
T ss_dssp             HHHHHHTTC---CSSEEEEECCCSCC
T ss_pred             HHHHHHhcc---CCCCceEEECCCCC
Confidence            999999963   34688999988754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.89  E-value=1.5e-22  Score=175.38  Aligned_cols=218  Identities=18%  Similarity=0.151  Sum_probs=159.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHC---C---CeEEEecCChhH--HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           20 TALVTGGTRGIGYAIVEELARF---G---ASVHTCGRDQNM--INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~---G---~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ++|||||+|+||++++++|+++   |   ++|++++|+...  .+.+ +.+. .+.++.++.+|++|++++++++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence            6999999999999999999997   8   999999986421  1111 1111 1357889999999998887765     


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------  160 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------  160 (266)
                         .++|+|||+||.....    .+.+++++.+++|+.++.++++++.+    .+.++||++||...+.           
T Consensus        75 ---~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             ---TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             ---cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEecchHHhCCCCCCCCCCCC
Confidence               3589999999975321    13455778899999999999998854    3457999999976432           


Q ss_pred             CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC---------CCCCC
Q 024551          161 SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP---------LARSA  231 (266)
Q Consensus       161 ~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  231 (266)
                      +..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.....  ..............+         ...+.
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  218 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTT--SHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCC--ChHHHHHHHHhcCCCcEEeCCCCeeEeeE
Confidence            23346789999999999999998774   69999999999998875421  111111122222211         12456


Q ss_pred             CccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          232 EPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       232 ~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      .++|+|+++++++...   .+|+.+++++|..
T Consensus       219 ~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~  247 (337)
T 1r6d_A          219 HTDDHCRGIALVLAGG---RAGEIYHIGGGLE  247 (337)
T ss_dssp             EHHHHHHHHHHHHHHC---CTTCEEEECCCCE
T ss_pred             eHHHHHHHHHHHHhCC---CCCCEEEeCCCCC
Confidence            7899999999998643   3789999998864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.89  E-value=3.8e-23  Score=169.42  Aligned_cols=207  Identities=11%  Similarity=-0.006  Sum_probs=153.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||+|+||++++++|+++|++|++++|+++..+..       ..++.++.+|++|+++++++++        .+|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~--------~~d   69 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK--------GAD   69 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT--------TCS
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc--------CCC
Confidence            6899999999999999999999999999999998754321       2578899999999999888775        489


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC----------Cchhh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP----------RLSAY  168 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~----------~~~~y  168 (266)
                      +|||+||....          ..+.+++|+.++..+++++    ++.+.+++|++||.....+.+          +...|
T Consensus        70 ~vi~~a~~~~~----------~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y  135 (227)
T 3dhn_A           70 AVISAFNPGWN----------NPDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL  135 (227)
T ss_dssp             EEEECCCC----------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred             EEEEeCcCCCC----------ChhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence            99999986421          1237899999998887776    445567999999988765433          36789


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +.+|.+.+.+.+.++.   ..|++++.+.||++.++............  .. ........+..++|+|+++++++... 
T Consensus       136 ~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~--~~-~~~~~~~~~i~~~Dva~ai~~~l~~~-  208 (227)
T 3dhn_A          136 PGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLGKD--DM-IVDIVGNSHISVEDYAAAMIDELEHP-  208 (227)
T ss_dssp             HHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEESS--BC-CCCTTSCCEEEHHHHHHHHHHHHHSC-
T ss_pred             HHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeecCC--Cc-ccCCCCCcEEeHHHHHHHHHHHHhCc-
Confidence            9999999999887765   46899999999999876543221110000  00 00001134577899999999999653 


Q ss_pred             CCccccEEEeCCCc
Q 024551          249 SYITGQVISIDGGY  262 (266)
Q Consensus       249 ~~~~G~~l~vdgG~  262 (266)
                       ...|+.+.+.+..
T Consensus       209 -~~~g~~~~~~~~~  221 (227)
T 3dhn_A          209 -KHHQERFTIGYLE  221 (227)
T ss_dssp             -CCCSEEEEEECCS
T ss_pred             -cccCcEEEEEeeh
Confidence             3689998887654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=1.6e-21  Score=171.14  Aligned_cols=227  Identities=15%  Similarity=0.051  Sum_probs=152.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHH-----HHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMI-----NERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +|+++||||+|+||++++++|+++|++|++++|+.+..     +.+.+.+...+.++.++.+|++|++++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            47899999999999999999999999999999986542     1111111112357889999999999999888754   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------  161 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------  161 (266)
                         ++|+||||||.....    .+.++++..+++|+.++.++++++.+...+ +.++||++||...+..           
T Consensus        78 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~  149 (372)
T 1db3_A           78 ---QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTP  149 (372)
T ss_dssp             ---CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred             ---CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCC
Confidence               589999999975432    234457788999999999999998765432 2379999999765432           


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHH-HHHHHhcC-C---------CCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQE-YVKLIAKT-P---------LARS  230 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~-~---------~~~~  230 (266)
                      ..+...|+.+|++.+.+++.++.++   ++.+..+.|..+..+.....+....... ........ +         ...+
T Consensus       150 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  226 (372)
T 1db3_A          150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW  226 (372)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeee
Confidence            1236789999999999999998875   4666666665555443322211111111 11111111 1         1245


Q ss_pred             CCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          231 AEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      ..++|+|++++.++....    ++.+++.+|.
T Consensus       227 i~v~Dva~a~~~~~~~~~----~~~~ni~~~~  254 (372)
T 1db3_A          227 GHAKDYVKMQWMMLQQEQ----PEDFVIATGV  254 (372)
T ss_dssp             EEHHHHHHHHHHTTSSSS----CCCEEECCCC
T ss_pred             eEHHHHHHHHHHHHhcCC----CceEEEcCCC
Confidence            678999999998885432    3567776654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.88  E-value=5.9e-23  Score=179.51  Aligned_cols=222  Identities=14%  Similarity=0.120  Sum_probs=156.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++|++|||||+|+||++++++|+++| ++|++++|+.....  .+.+.    .+. +.+|++|++.++++++.  ..
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~~  112 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--EE  112 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--CC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--cc
Confidence            34678999999999999999999999999 99999999765321  01111    222 67899999888877763  12


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC---------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP---------  163 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~---------  163 (266)
                      + +++|+|||+||....      +.+++++.+++|+.++.++++++.+    .+. +||++||...+...+         
T Consensus       113 ~-~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~  180 (357)
T 2x6t_A          113 F-GDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREY  180 (357)
T ss_dssp             C-SSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGG
T ss_pred             c-CCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCC
Confidence            3 579999999997543      2234678899999999999998864    344 999999987654332         


Q ss_pred             --CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc--cchhHHHHHHHHhcCC----------CCC
Q 024551          164 --RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL--NDLLVQEYVKLIAKTP----------LAR  229 (266)
Q Consensus       164 --~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~----------~~~  229 (266)
                        +...|+.+|.+.+.+++.++.+   .|++++.+.||.+.++......  ...............+          ...
T Consensus       181 ~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (357)
T 2x6t_A          181 EKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRD  257 (357)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEEC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEc
Confidence              2568999999999999998765   4799999999999987643211  1111111122222211          234


Q ss_pred             CCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          230 SAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       230 ~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +..++|+|+++++++....    |+.+++.+|..
T Consensus       258 ~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~  287 (357)
T 2x6t_A          258 FVYVGDVADVNLWFLENGV----SGIFNLGTGRA  287 (357)
T ss_dssp             EEEHHHHHHHHHHHHHHCC----CEEEEESCSCC
T ss_pred             cEEHHHHHHHHHHHHhcCC----CCeEEecCCCc
Confidence            5778999999999996533    88999988754

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.88  E-value=1e-21  Score=170.45  Aligned_cols=219  Identities=14%  Similarity=0.081  Sum_probs=158.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH-HHHHHHHHHHHhhcCCc
Q 024551           19 MTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG-DQREKLIETVSSVFDGK   96 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~~   96 (266)
                      |++|||||+|+||++++++|+++ |++|++++|+.+..+.+.     ...++.++.+|++|. +.++++++        .
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--------~   67 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------K   67 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH--------H
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc--------C
Confidence            47999999999999999999998 899999999876543221     124688999999984 55666554        4


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-------------
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-------------  163 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-------------  163 (266)
                      +|+|||+||......    ..+++++.+++|+.++.++++++.    +.+ +++|++||...+...+             
T Consensus        68 ~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~  138 (345)
T 2bll_A           68 CDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (345)
T ss_dssp             CSEEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             CCEEEEcccccCccc----hhcCHHHHHHHHHHHHHHHHHHHH----HhC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence            799999999754321    134567889999999999988874    344 7999999976543211             


Q ss_pred             -----CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc-----cchhH-HHHHHHHhcCC------
Q 024551          164 -----RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL-----NDLLV-QEYVKLIAKTP------  226 (266)
Q Consensus       164 -----~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~-----~~~~~-~~~~~~~~~~~------  226 (266)
                           +...|+.+|.+.+.+++.++.+.   |++++.+.||.+.++......     ..... ..........+      
T Consensus       139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (345)
T 2bll_A          139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  215 (345)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECC
Confidence                 12379999999999999998764   799999999999887643210     01111 11112222222      


Q ss_pred             ---CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          227 ---LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       227 ---~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                         ...+..++|+|+++++++.......+|+.+++.+|.
T Consensus       216 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          216 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence               124667899999999999755444679999999873

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.88  E-value=6.9e-23  Score=177.92  Aligned_cols=222  Identities=17%  Similarity=0.176  Sum_probs=156.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCC-------CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFG-------ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      +.+++|++|||||+|+||++++++|+++|       ++|++++|+.+....      ....++.++.+|++|++++++++
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHH
Confidence            45789999999999999999999999999       899999997643221      12457889999999999988877


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCCCCCC-C-
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAGAISI-P-  163 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~~~~~-~-  163 (266)
                      +       +++|+|||+||....     .+.+++++.+++|+.++.++++++.+...+. +.++||++||...+... + 
T Consensus        84 ~-------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~  151 (342)
T 2hrz_A           84 E-------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY  151 (342)
T ss_dssp             H-------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS
T ss_pred             h-------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC
Confidence            5       369999999997542     2356788999999999999999987644322 14799999998765432 2 


Q ss_pred             ---------CchhhhhhHHHHHHHHHHHHHHhc--cCCcEEEEEe--cCcccCCCCCCCccchhHHH-HHHHHhcC----
Q 024551          164 ---------RLSAYAASKGAINQLTKNLACEWA--TDSIRVNAVS--PWAVNTQISPPDLNDLLVQE-YVKLIAKT----  225 (266)
Q Consensus       164 ---------~~~~y~~sK~al~~~~~~~a~el~--~~gi~v~~i~--PG~v~t~~~~~~~~~~~~~~-~~~~~~~~----  225 (266)
                               +...|+.+|.+.+.+++.++.+..  ...+|++.+.  ||...++.      ...... ........    
T Consensus       152 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~------~~~~~~~~~~~~~~~~~~~  225 (342)
T 2hrz_A          152 PIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAA------SGFFSNILREPLVGQEAVL  225 (342)
T ss_dssp             SBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSG------GGHHHHHHHHHHTTCCEEE
T ss_pred             CcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchh------HHHHHHHHHHHhcCCCeec
Confidence                     567899999999999999887632  2235666666  76544321      111111 11111111    


Q ss_pred             CCCC-----CCCccchHHHHHHHhcCCCC-CccccEEEeC
Q 024551          226 PLAR-----SAEPNEISPLVAFLCLPAAS-YITGQVISID  259 (266)
Q Consensus       226 ~~~~-----~~~~~eia~~~~~l~s~~~~-~~~G~~l~vd  259 (266)
                      +...     +..++|+++++++++..... ...|+.+++.
T Consensus       226 ~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          226 PVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             CSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             cCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC
Confidence            2221     45789999999988853211 0135677774

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.88  E-value=7.7e-22  Score=173.29  Aligned_cols=223  Identities=12%  Similarity=0.081  Sum_probs=162.8

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCC-CHHHHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS-FGDQREKLIETV   89 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~i~~~~~~~   89 (266)
                      .+..+++|++|||||+|.||++++++|+++ |++|++++|+.+....+.+     ..++.++.+|++ |.+++.++++  
T Consensus        18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~--   90 (372)
T 3slg_A           18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK--   90 (372)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH--
T ss_pred             CCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc--
Confidence            344467899999999999999999999998 9999999998765433221     257889999999 9999888776  


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-------
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-------  162 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-------  162 (266)
                            .+|+|||+|+......    ..++.++.+++|+.++..+++++.    +.+ .++|++||...+...       
T Consensus        91 ------~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~-~~~v~~SS~~vyg~~~~~~~~e  155 (372)
T 3slg_A           91 ------KCDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYGMCADEQFDP  155 (372)
T ss_dssp             ------HCSEEEECBCCCCHHH----HHHCHHHHHHHHTTTTHHHHHHHH----HHT-CEEEEECCGGGGBSCCCSSBCT
T ss_pred             ------cCCEEEEcCccccHHH----HhhCHHHHHHHHHHHHHHHHHHHH----HhC-CcEEEeCcHHHhCCCCCCCCCc
Confidence                  4899999999764321    234566789999999999988874    444 799999997543321       


Q ss_pred             -----------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-----chhHH-HHHHHHhcC
Q 024551          163 -----------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-----DLLVQ-EYVKLIAKT  225 (266)
Q Consensus       163 -----------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-----~~~~~-~~~~~~~~~  225 (266)
                                 .+...|+.+|.+.+.+++.++.+    |++++.+.|+.+..+.....+.     ..... .........
T Consensus       156 ~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (372)
T 3slg_A          156 DASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGE  231 (372)
T ss_dssp             TTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTC
T ss_pred             cccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCC
Confidence                       23347999999999999988755    7999999999998876543111     11111 112222222


Q ss_pred             C---------CCCCCCccchHHHHHHHhcCCCCCccccEEEeCC
Q 024551          226 P---------LARSAEPNEISPLVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       226 ~---------~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      +         ...+..++|+|+++++++........|+.+++.+
T Consensus       232 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~  275 (372)
T 3slg_A          232 NISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGN  275 (372)
T ss_dssp             CEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             CcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCC
Confidence            2         1245678999999999997654446799999988

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=1.7e-21  Score=171.41  Aligned_cols=226  Identities=14%  Similarity=0.021  Sum_probs=157.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-----HHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-----INERIQEWES-KGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-----~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.+.. .+.++.++.+|++|++++.++++..   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999997542     2222111111 2346888999999999999888754   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------  161 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------  161 (266)
                         ++|+|||+||.....    .+.+++++.+++|+.++.++++++.+...+ +.++||++||...+..           
T Consensus       102 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E~~~  173 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTP  173 (375)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred             ---CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCccCC
Confidence               589999999975321    134668889999999999999998664431 1379999999876542           


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHH-HHHHHHhc-CC---------CCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ-EYVKLIAK-TP---------LARS  230 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~~~~~-~~---------~~~~  230 (266)
                      ..+...|+.+|++.+.+++.++.++   ++.+..+.|+.+..+.....+...... ........ .+         ...+
T Consensus       174 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  250 (375)
T 1t2a_A          174 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW  250 (375)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeee
Confidence            2245789999999999999998774   578877888776665433222111111 11111111 11         1245


Q ss_pred             CCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          231 AEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      ..++|+|++++.++....    ++.+++.+|.
T Consensus       251 i~v~Dva~a~~~~~~~~~----~~~~ni~~~~  278 (375)
T 1t2a_A          251 GHAKDYVEAMWLMLQNDE----PEDFVIATGE  278 (375)
T ss_dssp             EEHHHHHHHHHHHHHSSS----CCCEEECCSC
T ss_pred             EEHHHHHHHHHHHHhcCC----CceEEEeCCC
Confidence            678999999999885432    3556666554

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.88  E-value=1.4e-22  Score=170.29  Aligned_cols=180  Identities=19%  Similarity=0.173  Sum_probs=142.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||+++||++++++|+++|++|++++|+++...         ..++.++.+|++|++++.++++        .+|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~--------~~d   65 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK--------DCD   65 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT--------TCS
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc--------CCC
Confidence            68999999999999999999999999999999875311         1357889999999998887765        489


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC------------Cch
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP------------RLS  166 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~------------~~~  166 (266)
                      +||||||...        .+.+++.+++|+.++.++++++.    +.+.++||++||...+...+            +..
T Consensus        66 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~  133 (267)
T 3ay3_A           66 GIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAAR----NLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS  133 (267)
T ss_dssp             EEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHH----HTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred             EEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence            9999999752        23467889999999999998874    34567999999987654332            357


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCccc-CCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVN-TQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      .|+.+|++.+.+++.++.   .+|++++.+.||++. ++.     ...      .      ...+..++|+|+.++.++.
T Consensus       134 ~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~-----~~~------~------~~~~~~~~dva~~~~~~~~  193 (267)
T 3ay3_A          134 LYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPK-----DAR------M------MATWLSVDDFMRLMKRAFV  193 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCC-----SHH------H------HHHBCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCC-----CCC------e------eeccccHHHHHHHHHHHHh
Confidence            899999999999998864   368999999999974 332     111      0      1135789999999999886


Q ss_pred             CC
Q 024551          246 PA  247 (266)
Q Consensus       246 ~~  247 (266)
                      ..
T Consensus       194 ~~  195 (267)
T 3ay3_A          194 AP  195 (267)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.88  E-value=2.9e-21  Score=166.77  Aligned_cols=222  Identities=14%  Similarity=0.072  Sum_probs=158.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||+|+||++++++|+++|++|++++|+.....   +.   ...++.++.+|++|++++++++++      .++|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~---~~~~~~~~~~D~~~~~~~~~~~~~------~~~d   69 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DA---ITEGAKFYNGDLRDKAFLRDVFTQ------ENIE   69 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GG---SCTTSEEEECCTTCHHHHHHHHHH------SCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hh---cCCCcEEEECCCCCHHHHHHHHhh------cCCC
Confidence            58999999999999999999999999999998754321   11   123678899999999998888764      3699


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------CCCchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------IPRLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~  167 (266)
                      +|||+||......    +.+++++.+++|+.++.++++++    ++.+.+++|++||...+..           ..+...
T Consensus        70 ~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           70 AVMHFAADSLVGV----SMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             EEEECCCCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             EEEECCcccCccc----cccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            9999999754321    34567889999999999998876    3445579999999765432           123578


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc------cchhHHHHHHHHh-cCC--------------
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL------NDLLVQEYVKLIA-KTP--------------  226 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~-~~~--------------  226 (266)
                      |+.+|.+.+.+++.++.++   |++++.+.||.+..+.....+      ............. ..+              
T Consensus       142 Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG  218 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence            9999999999999988764   799999999999877421110      1111111111111 111              


Q ss_pred             --CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          227 --LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       227 --~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                        ...+...+|+|++++.++......-.|+.+++.+|..
T Consensus       219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~  257 (330)
T 2c20_A          219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNG  257 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTC
T ss_pred             ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCC
Confidence              1134567999999998885322222367888877654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.87  E-value=6.2e-22  Score=169.98  Aligned_cols=211  Identities=14%  Similarity=0.082  Sum_probs=124.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.           . +  ++.+|++|++++.++++..      ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~------~~   61 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF------QP   61 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH------CC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh------CC
Confidence            5899999999999999999999999999999987643           1 1  6789999999988888754      58


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC----------CCCchh
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS----------IPRLSA  167 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~----------~~~~~~  167 (266)
                      |+|||+||.....    .+.+++++.+++|+.++.++++++.+    .+ ++||++||...+.+          ..+...
T Consensus        62 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~  132 (315)
T 2ydy_A           62 HVIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIPAPLNL  132 (315)
T ss_dssp             SEEEECC-----------------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred             CEEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence            9999999975432    24567889999999999999999864    23 49999999886644          344678


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCC--CccchhHHHHH-HH----HhcCCCCCCCCccchHHHH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPP--DLNDLLVQEYV-KL----IAKTPLARSAEPNEISPLV  240 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~--~~~~~~~~~~~-~~----~~~~~~~~~~~~~eia~~~  240 (266)
                      |+.+|.+.+.+++.++.+       +..+.|+.+..+....  .+......... ..    ....+..++..++|+|+++
T Consensus       133 Y~~sK~~~e~~~~~~~~~-------~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  205 (315)
T 2ydy_A          133 YGKTKLDGEKAVLENNLG-------AAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVC  205 (315)
T ss_dssp             HHHHHHHHHHHHHHHCTT-------CEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCC-------eEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHH
Confidence            999999999999987433       2344454444332210  11111111111 00    0012335677899999999


Q ss_pred             HHHhcCC-CCCccccEEEeCCCccC
Q 024551          241 AFLCLPA-ASYITGQVISIDGGYTA  264 (266)
Q Consensus       241 ~~l~s~~-~~~~~G~~l~vdgG~~~  264 (266)
                      ++++.+. .....|+.+++.+|..+
T Consensus       206 ~~~~~~~~~~~~~~~~~~i~~~~~~  230 (315)
T 2ydy_A          206 RQLAEKRMLDPSIKGTFHWSGNEQM  230 (315)
T ss_dssp             HHHHHHHHTCTTCCEEEECCCSCCB
T ss_pred             HHHHHhhccccCCCCeEEEcCCCcc
Confidence            9998642 12356889999988654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.87  E-value=2.5e-21  Score=157.63  Aligned_cols=204  Identities=14%  Similarity=0.060  Sum_probs=134.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++||||+|+||++++++|+++|++|++++|+++.++++.       .++.++++|++|+++         +.+ ..+|
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~---------~~~-~~~d   63 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL---------SDL-SDQN   63 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH---------HHH-TTCS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh---------hhh-cCCC
Confidence            36999999999999999999999999999999987655332       468899999999987         122 4689


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC------------Cch
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP------------RLS  166 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~------------~~~  166 (266)
                      +||||+|....             ....|+.+    ++.+++.+++.+.+++|++||..+..+.+            +..
T Consensus        64 ~vi~~ag~~~~-------------~~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~  126 (221)
T 3ew7_A           64 VVVDAYGISPD-------------EAEKHVTS----LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAP  126 (221)
T ss_dssp             EEEECCCSSTT-------------TTTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-------------------CC
T ss_pred             EEEECCcCCcc-------------ccchHHHH----HHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHH
Confidence            99999997421             13445554    44456666777678999999988765443            235


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .|+.+|.+.+.+. .+..  ...|++++.++||++.++.....   .................+.+++|+|++++.++..
T Consensus       127 ~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  200 (221)
T 3ew7_A          127 YYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTG---DYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIER  200 (221)
T ss_dssp             CSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC------------------------CCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccC---ceEeccccceecCCCCceEeHHHHHHHHHHHHhC
Confidence            6999999998873 2221  15789999999999988621111   0000000000111113467899999999999965


Q ss_pred             CCCCccccEEEeCCCccC
Q 024551          247 AASYITGQVISIDGGYTA  264 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~  264 (266)
                      .  ...|+.+++-+-...
T Consensus       201 ~--~~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          201 P--NHLNEHFTVAGKLEH  216 (221)
T ss_dssp             C--SCTTSEEECCC----
T ss_pred             c--cccCCEEEECCCCcc
Confidence            4  357899988775543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.87  E-value=1.9e-21  Score=158.87  Aligned_cols=199  Identities=16%  Similarity=0.075  Sum_probs=141.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +++||||+|+||++++++|+++|++|++++|+++.++++.      ..++.++++|++|+++         +.+ ..+|+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~---------~~~-~~~d~   65 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTE---------ADL-DSVDA   65 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCH---------HHH-TTCSE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccH---------hhc-ccCCE
Confidence            5999999999999999999999999999999987765332      2468899999999987         122 46899


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC--------------c
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPR--------------L  165 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~--------------~  165 (266)
                      ||||||......           ..++|+.++..+    ++.+++.+ +++|++||.++....+.              .
T Consensus        66 vi~~ag~~~~~~-----------~~~~n~~~~~~l----~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
T 3h2s_A           66 VVDALSVPWGSG-----------RGYLHLDFATHL----VSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ  129 (224)
T ss_dssp             EEECCCCCTTSS-----------CTHHHHHHHHHH----HHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred             EEECCccCCCcc-----------hhhHHHHHHHHH----HHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence            999999762111           134566665444    55567776 89999999877655443              5


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ..|+.+|.+.+.+.    ......|++++.++||++.++.....+....    ...........+..++|+|+++++++.
T Consensus       130 ~~y~~sK~~~e~~~----~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~----~~~~~~~~~~~~i~~~DvA~~~~~~l~  201 (224)
T 3h2s_A          130 PWYDGALYQYYEYQ----FLQMNANVNWIGISPSEAFPSGPATSYVAGK----DTLLVGEDGQSHITTGNMALAILDQLE  201 (224)
T ss_dssp             TTHHHHHHHHHHHH----HHTTCTTSCEEEEEECSBCCCCCCCCEEEES----SBCCCCTTSCCBCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHH----HHHhcCCCcEEEEcCccccCCCcccCceecc----cccccCCCCCceEeHHHHHHHHHHHhc
Confidence            78999999998552    1224678999999999999873322211000    000001122457889999999999996


Q ss_pred             CCCCCccccEEEeCC
Q 024551          246 PAASYITGQVISIDG  260 (266)
Q Consensus       246 ~~~~~~~G~~l~vdg  260 (266)
                      ..  ...|+.+.+.+
T Consensus       202 ~~--~~~g~~~~~~~  214 (224)
T 3h2s_A          202 HP--TAIRDRIVVRD  214 (224)
T ss_dssp             SC--CCTTSEEEEEE
T ss_pred             Cc--cccCCEEEEec
Confidence            53  35688887654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.87  E-value=2.8e-21  Score=167.16  Aligned_cols=225  Identities=12%  Similarity=0.009  Sum_probs=157.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHH-HHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN-ERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      -.++++|||||+|+||++++++|+++|++|++++|+.+... ...+.+. ...++.++.+|++|+++++++++..     
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   85 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----   85 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc-----
Confidence            45789999999999999999999999999999999765321 1111111 1346889999999999999888754     


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCC----------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIP----------  163 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~----------  163 (266)
                       ++|+|||+||......    +.+++++.+++|+.++.++++++.+    .+ .++||++||...+...+          
T Consensus        86 -~~d~Vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~  156 (335)
T 1rpn_A           86 -QPQEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQ----FSPETRFYQASTSEMFGLIQAERQDENTPF  156 (335)
T ss_dssp             -CCSEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHH----HCTTSEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             -CCCEEEECccccchhh----hhhChHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEEeCHHHhCCCCCCCCCcccCC
Confidence             5899999999653211    1234678899999999999988854    33 37999999976543221          


Q ss_pred             -CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHH-HHHHHhcC-CC---------CCCC
Q 024551          164 -RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQE-YVKLIAKT-PL---------ARSA  231 (266)
Q Consensus       164 -~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~-~~---------~~~~  231 (266)
                       +...|+.+|.+.+.+++.++.++   |+.+..+.|+.+..+............. ........ +.         ..+.
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i  233 (335)
T 1rpn_A          157 YPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWG  233 (335)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceE
Confidence             24689999999999999988764   6888889998887765433221111111 11111111 11         1345


Q ss_pred             CccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          232 EPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       232 ~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      .++|+|++++.++....    ++.+++.+|.
T Consensus       234 ~v~Dva~a~~~~~~~~~----~~~~ni~~~~  260 (335)
T 1rpn_A          234 FAGDYVEAMWLMLQQDK----ADDYVVATGV  260 (335)
T ss_dssp             EHHHHHHHHHHHHHSSS----CCCEEECCSC
T ss_pred             EHHHHHHHHHHHHhcCC----CCEEEEeCCC
Confidence            67999999999986432    3567777664

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.87  E-value=4.1e-21  Score=166.43  Aligned_cols=227  Identities=15%  Similarity=0.119  Sum_probs=151.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++|||||+|+||++++++|+++|++|++++|......+..+.+.+ .+.++.++.+|++|+++++++++.    .  ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~--~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD----H--AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH----T--TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc----c--CCC
Confidence            699999999999999999999999999987642211111222222 134678899999999998888764    1  599


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------C-CCch
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------I-PRLS  166 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~-~~~~  166 (266)
                      +|||+||......    ..+++++.+++|+.++.++++++    ++.+.++||++||...+..           . +...
T Consensus        76 ~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~  147 (338)
T 1udb_A           76 TVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQS  147 (338)
T ss_dssp             EEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSS
T ss_pred             EEEECCccCcccc----chhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCC
Confidence            9999999753221    23446778999999999998765    4445679999999765421           1 2367


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCC----CCC---ccchhHHHHHHHHh-c-C------------
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQIS----PPD---LNDLLVQEYVKLIA-K-T------------  225 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~----~~~---~~~~~~~~~~~~~~-~-~------------  225 (266)
                      .|+.||++.+.+++.++.+.  .|+++..+.|+.+..+..    .+.   .............. . .            
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  225 (338)
T 1udb_A          148 PYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE  225 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             hHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCC
Confidence            89999999999999998873  368999998876654321    110   01111111111111 1 1            


Q ss_pred             ---CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          226 ---PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       226 ---~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                         ..+.+..++|+|++++.++........++.+++.+|.
T Consensus       226 ~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~  265 (338)
T 1udb_A          226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGV  265 (338)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSC
T ss_pred             CCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCC
Confidence               1123566799999998877421111224678876654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.87  E-value=8.9e-23  Score=176.95  Aligned_cols=220  Identities=18%  Similarity=0.147  Sum_probs=147.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH--HHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER--IQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~--~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..++.  ...+. ...++.++++|++|+++++++++        
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA--------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT--------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc--------
Confidence            68999999999999999999999999999988876542211  12232 23468889999999988777664        


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----CC--------
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----SI--------  162 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----~~--------  162 (266)
                      .+|+|||+|+....   .  ..+..++.+++|+.++.++++++.+..   +.++||++||.++..     +.        
T Consensus        80 ~~D~Vih~A~~~~~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~  151 (338)
T 2rh8_A           80 GCDFVFHVATPVHF---A--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKN  151 (338)
T ss_dssp             TCSEEEEESSCCCC--------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTT
T ss_pred             CCCEEEEeCCccCC---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhh
Confidence            37999999985421   1  112234589999999999999885421   257999999976321     00        


Q ss_pred             --------C---CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc-------
Q 024551          163 --------P---RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK-------  224 (266)
Q Consensus       163 --------~---~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------  224 (266)
                              +   ....|+.||.+.+.+++.++.+   +|++++.+.||.+.++............ .......       
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~-~~~~~~g~~~~~~~  227 (338)
T 2rh8_A          152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGL-AMSLITGNEFLING  227 (338)
T ss_dssp             TTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHH-HHHHHHTCHHHHHH
T ss_pred             ccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHH-HHHHHcCCcccccc
Confidence                    0   1125999999999988877654   4799999999999998765432221100 0000000       


Q ss_pred             -------CCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCC
Q 024551          225 -------TPLARSAEPNEISPLVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       225 -------~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                             .....+..++|+|+++++++...  ...|.++..++
T Consensus       228 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~~  268 (338)
T 2rh8_A          228 MKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGRYICCAA  268 (338)
T ss_dssp             HHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEEEEECSE
T ss_pred             ccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCcEEEecC
Confidence                   00014778999999999998542  34566544333

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.87  E-value=1.3e-20  Score=161.52  Aligned_cols=208  Identities=14%  Similarity=0.091  Sum_probs=153.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      .|+++||||+|.||++++++|+++|++|++++|++...+     +.    ++.++.+|++ ++++.++++        ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~Dl~-~~~~~~~~~--------~~   63 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN----DYEYRVSDYT-LEDLINQLN--------DV   63 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT--------TC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC----ceEEEEcccc-HHHHHHhhc--------CC
Confidence            378999999999999999999999999999999844322     11    6788999999 888777654        58


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------CCCch
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------IPRLS  166 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~  166 (266)
                      |+|||+|+.....        ++++.+++|+.++..+++++    ++.+.+++|++||...+..           ..+..
T Consensus        64 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (311)
T 3m2p_A           64 DAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSDETSLPWNEKELPLPDL  131 (311)
T ss_dssp             SEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred             CEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence            9999999976543        34567899999999998887    4455678999999765432           12356


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC---------CCCCCccchH
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL---------ARSAEPNEIS  237 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~eia  237 (266)
                      .|+.+|.+.+.+++.++.+   .|++++.+.|+.+..+.....  ..............+.         ..+..++|+|
T Consensus       132 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva  206 (311)
T 3m2p_A          132 MYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAA  206 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHH
Confidence            8999999999999998875   589999999999998765432  1111111222222221         2345678999


Q ss_pred             HHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          238 PLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +++++++....   .|+.+++.+|..
T Consensus       207 ~a~~~~~~~~~---~~~~~~i~~~~~  229 (311)
T 3m2p_A          207 KSVIYALKQEK---VSGTFNIGSGDA  229 (311)
T ss_dssp             HHHHHHTTCTT---CCEEEEECCSCE
T ss_pred             HHHHHHHhcCC---CCCeEEeCCCCc
Confidence            99999996543   788999988764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.86  E-value=2.3e-23  Score=169.17  Aligned_cols=196  Identities=11%  Similarity=0.070  Sum_probs=146.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+|+++||||+|+||++++++|+++|+  +|++++|+++.          ...++.++.+|++|++++++++        
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~--------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS--------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence            468999999999999999999999998  99999998764          1346778889998877654432        


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                        +|++|||+|....      +.+++++.+++|+.++..+++++.    +.+.+++|++||......  ....|+.+|.+
T Consensus        66 --~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~  131 (215)
T 2a35_A           66 --IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADAK--SSIFYNRVKGE  131 (215)
T ss_dssp             --CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             --hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHH----HcCCCEEEEECCcccCCC--CccHHHHHHHH
Confidence              8999999997532      234577889999999999988874    445679999999876643  35689999999


Q ss_pred             HHHHHHHHHHHhccCCcE-EEEEecCcccCCCCCCCccchhHHHHHHHHhcCC----CCCCCCccchHHHHHHHhcCCCC
Q 024551          175 INQLTKNLACEWATDSIR-VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP----LARSAEPNEISPLVAFLCLPAAS  249 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~-v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~eia~~~~~l~s~~~~  249 (266)
                      ++.+++.       .|++ ++.+.||++.++.....+.....      ....+    ...+..++|+|++++.++.... 
T Consensus       132 ~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-  197 (215)
T 2a35_A          132 LEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILA------APIARILPGKYHGIEACDLARALWRLALEEG-  197 (215)
T ss_dssp             HHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTT------CCCC----CHHHHHHHHHHHHHHHHHHTCCC-
T ss_pred             HHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHH------HhhhhccCCCcCcEeHHHHHHHHHHHHhcCC-
Confidence            9999875       3798 99999999998764421111100      00011    1134568999999999996542 


Q ss_pred             CccccEEEeCCC
Q 024551          250 YITGQVISIDGG  261 (266)
Q Consensus       250 ~~~G~~l~vdgG  261 (266)
                         ++.+++.++
T Consensus       198 ---~~~~~i~~~  206 (215)
T 2a35_A          198 ---KGVRFVESD  206 (215)
T ss_dssp             ---SEEEEEEHH
T ss_pred             ---CCceEEcHH
Confidence               666666654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.86  E-value=9.7e-21  Score=162.13  Aligned_cols=217  Identities=18%  Similarity=0.127  Sum_probs=156.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHC--CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARF--GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +|+++||||+|+||++++++|+++  |++|++++|+....+     +..   ++.++.+|++|++++++++++.      
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~---~~~~~~~D~~d~~~~~~~~~~~------   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN---SGPFEVVNALDFNQIEHLVEVH------   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH---SSCEEECCTTCHHHHHHHHHHT------
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC---CCceEEecCCCHHHHHHHHhhc------
Confidence            478999999999999999999999  899999999765421     111   4668899999999988887642      


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC------------C
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI------------P  163 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~------------~  163 (266)
                      ++|++||+||.....     ..+++++.+++|+.++.++++++.    +.+.+++|++||...+...            .
T Consensus        68 ~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  138 (312)
T 2yy7_A           68 KITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAK----AKKIKKIFWPSSIAVFGPTTPKENTPQYTIME  138 (312)
T ss_dssp             TCCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHH----TTSCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred             CCCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence            589999999975321     235578889999999999988874    4455799999998765432            2


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chhHHHHHHHHhcC---------CCCCCCC
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLLVQEYVKLIAKT---------PLARSAE  232 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~  232 (266)
                      +...|+.+|.+.+.+++.++.++   |++++.+.||.+..+...+...  ..............         ....+..
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  215 (312)
T 2yy7_A          139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMY  215 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeee
Confidence            35689999999999999988764   7999999999998865332211  11111111111111         1123456


Q ss_pred             ccchHHHHHHHhcCCCCCc-cccEEEeCC
Q 024551          233 PNEISPLVAFLCLPAASYI-TGQVISIDG  260 (266)
Q Consensus       233 ~~eia~~~~~l~s~~~~~~-~G~~l~vdg  260 (266)
                      ++|+|++++.++....... .|+.+++.+
T Consensus       216 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          216 MDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            7999999999886443222 247777754

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.86  E-value=9.4e-21  Score=178.43  Aligned_cols=222  Identities=14%  Similarity=0.087  Sum_probs=161.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHH-HHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ-REKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~   93 (266)
                      +++|+++||||+|+||++++++|+++ |++|++++|+.+..+++.     ...++.++.+|++|.++ ++++++      
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc------
Confidence            57899999999999999999999998 899999999876543211     13478899999999765 554443      


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------  162 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------  162 (266)
                        .+|+|||+||......    ..+++++.+++|+.++.++++++.    +.+ +++|++||...+...           
T Consensus       382 --~~D~Vih~Aa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~----~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~  450 (660)
T 1z7e_A          382 --KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHSN  450 (660)
T ss_dssp             --HCSEEEECCCCCCTHH----HHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCSSSBCTTTCC
T ss_pred             --CCCEEEECceecCccc----cccCHHHHHHhhhHHHHHHHHHHH----HhC-CEEEEEecHHHcCCCCCcccCCCccc
Confidence              4799999999754321    234567899999999999988874    344 799999997654321           


Q ss_pred             -------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC------ccchhHHHHHHHHhcCCC--
Q 024551          163 -------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD------LNDLLVQEYVKLIAKTPL--  227 (266)
Q Consensus       163 -------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~--  227 (266)
                             .....|+.+|.+.+.+++.++.+.   |++++.+.||.+.++.....      ................+.  
T Consensus       451 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  527 (660)
T 1z7e_A          451 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL  527 (660)
T ss_dssp             EEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEE
T ss_pred             cccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEE
Confidence                   123379999999999999998764   79999999999998764321      011111111222222222  


Q ss_pred             -------CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          228 -------ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       228 -------~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                             +.+..++|+|+++++++.....+.+|+.+++++|.
T Consensus       528 ~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          528 IDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             EGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             eCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence                   23566899999999999765445689999999874

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.86  E-value=4.7e-21  Score=162.77  Aligned_cols=195  Identities=16%  Similarity=0.094  Sum_probs=147.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ..|++|||||+|+||++++++|+++|++|++++|+                     .+|++|++++.++++..      +
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~------~   63 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK------K   63 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH------C
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc------C
Confidence            45899999999999999999999999999999996                     37999999998888754      5


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-----------Cc
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-----------RL  165 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-----------~~  165 (266)
                      +|+|||+||....    +.+.+++++.+++|+.++.++++++.+    .+. +||++||...+.+.+           +.
T Consensus        64 ~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~  134 (292)
T 1vl0_A           64 PNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDGEAKEPITEFDEVNPQ  134 (292)
T ss_dssp             CSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred             CCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECCCCCCCCCCCCCCCCc
Confidence            8999999997532    123466889999999999999998854    333 999999986654322           35


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC-------CCCCCCCccchHH
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-------PLARSAEPNEISP  238 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~eia~  238 (266)
                      ..|+.+|.+.+.+++.++.       .+..+.|+.+..+ . ..+....   ........       ....+..++|+|+
T Consensus       135 ~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~Dva~  202 (292)
T 1vl0_A          135 SAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-G-NNFVKTM---INLGKTHDELKVVHDQVGTPTSTVDLAR  202 (292)
T ss_dssp             SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-S-SCHHHHH---HHHHHHCSEEEEESSCEECCEEHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-C-cChHHHH---HHHHhcCCcEEeecCeeeCCccHHHHHH
Confidence            6899999999999987642       4778888888766 2 1111111   11111121       2245677899999


Q ss_pred             HHHHHhcCCCCCccccEEEeCCCcc
Q 024551          239 LVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       239 ~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++++++...    +|+.+++++|..
T Consensus       203 ~~~~~~~~~----~~~~~~i~~~~~  223 (292)
T 1vl0_A          203 VVLKVIDEK----NYGTFHCTCKGI  223 (292)
T ss_dssp             HHHHHHHHT----CCEEEECCCBSC
T ss_pred             HHHHHHhcC----CCcEEEecCCCC
Confidence            999999653    688999988754

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.85  E-value=6.7e-21  Score=165.58  Aligned_cols=219  Identities=11%  Similarity=0.060  Sum_probs=151.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.....+..+.+. ...++.++.+|+.++.            + 
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~-   89 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y-   89 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C-
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h-
Confidence            3678999999999999999999999999999999986432111111111 1346888999998752            3 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC--------------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI--------------  160 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~--------------  160 (266)
                      ..+|+|||+||.......    .+++++.+++|+.++.++++++.+    .+ .++|++||...+.              
T Consensus        90 ~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E~~~~~  160 (343)
T 2b69_A           90 IEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGH  160 (343)
T ss_dssp             CCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCB
T ss_pred             cCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCccccccc
Confidence            469999999997543211    123567899999999999988753    33 4999999976542              


Q ss_pred             --CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC---------CCC
Q 024551          161 --SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP---------LAR  229 (266)
Q Consensus       161 --~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~  229 (266)
                        +..+...|+.+|.+.+.+++.++.+.   |++++.+.||.+.++.....................+         ...
T Consensus       161 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (343)
T 2b69_A          161 VNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRA  237 (343)
T ss_dssp             CCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEE
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEe
Confidence              22335679999999999999988764   7999999999999876443211111111122222211         124


Q ss_pred             CCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          230 SAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       230 ~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +..++|+|+++++++...    .|+.+++.+|..
T Consensus       238 ~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~  267 (343)
T 2b69_A          238 FQYVSDLVNGLVALMNSN----VSSPVNLGNPEE  267 (343)
T ss_dssp             CEEHHHHHHHHHHHHTSS----CCSCEEESCCCE
T ss_pred             eEeHHHHHHHHHHHHhcC----CCCeEEecCCCC
Confidence            567899999999998643    256788877653

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.84  E-value=7.9e-20  Score=165.94  Aligned_cols=226  Identities=19%  Similarity=0.110  Sum_probs=155.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHC---CCeEEEecCChhHHHHHHHHHH---------------hcCCeeEEEecc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARF---GASVHTCGRDQNMINERIQEWE---------------SKGFKVTGSVCD   75 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~---G~~v~~~~r~~~~~~~~~~~l~---------------~~~~~~~~~~~D   75 (266)
                      ...++|+||||||+|+||++++++|+++   |++|++++|+++..+...+...               ....++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            4568999999999999999999999999   9999999998765432221111               113589999999


Q ss_pred             CC------CHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCe
Q 024551           76 LS------FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNAS  149 (266)
Q Consensus        76 ~~------~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~  149 (266)
                      ++      |.++++++++        ++|+||||||....        +.+++.+++|+.++.++++++    .+.+.++
T Consensus       149 l~~~~~gld~~~~~~~~~--------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa----~~~~~~~  208 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE--------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIA----LTTKLKP  208 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH--------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHH----TSSSCCC
T ss_pred             CCCcccCCCHHHHHHHHc--------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHH----HhCCCCe
Confidence            99      4556665554        48999999997643        224467899999999998877    3445569


Q ss_pred             EEEEecCCCCCCCCC----------------------chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCC
Q 024551          150 IVFMSSVAGAISIPR----------------------LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISP  207 (266)
Q Consensus       150 iv~vss~~~~~~~~~----------------------~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~  207 (266)
                      +|++||.+.+.....                      ...|+.||.+.+.+++.++.+.   |++++.+.||.+..+...
T Consensus       209 ~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~~  285 (478)
T 4dqv_A          209 FTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTSY  285 (478)
T ss_dssp             EEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSSS
T ss_pred             EEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCcc
Confidence            999999765332111                      1349999999999999988763   799999999999875321


Q ss_pred             CC--ccchhHHHH-HHHHh--cCCC---------------CCCCCccchHHHHHHHhcCC--CCCccccEEEeCCCc
Q 024551          208 PD--LNDLLVQEY-VKLIA--KTPL---------------ARSAEPNEISPLVAFLCLPA--ASYITGQVISIDGGY  262 (266)
Q Consensus       208 ~~--~~~~~~~~~-~~~~~--~~~~---------------~~~~~~~eia~~~~~l~s~~--~~~~~G~~l~vdgG~  262 (266)
                      ..  ......... .....  ..|.               ..+...+|+|++++.++...  ...-.|+.+++.++.
T Consensus       286 ~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~  362 (478)
T 4dqv_A          286 AGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH  362 (478)
T ss_dssp             SSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCC
T ss_pred             CCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCC
Confidence            11  111111111 11111  1111               13356799999999887531  122457888887664

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=9.4e-21  Score=161.97  Aligned_cols=217  Identities=14%  Similarity=0.117  Sum_probs=152.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           20 TALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  .+.+..    +. +.+|++|.+.++++++...  + +++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~----~~-~~~d~~~~~~~~~~~~~~~--~-~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD----LN-IADYMDKEDFLIQIMAGEE--F-GDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT----SC-CSEEEEHHHHHHHHHTTCC--C-SSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc----ce-eccccccHHHHHHHHhccc--c-CCCc
Confidence            48999999999999999999999 99999998765421  111221    12 6789999888777665210  1 3699


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-----------Cchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-----------RLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-----------~~~~  167 (266)
                      +|||+||....      +.+++++.+++|+.++.++++++.+    .+. ++|++||...+...+           +...
T Consensus        71 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~  139 (310)
T 1eq2_A           71 AIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNV  139 (310)
T ss_dssp             EEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             EEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence            99999997543      2234677899999999999988853    345 999999986543222           2568


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc--cchhHHHHHHHHhc---------CC-CCCCCCccc
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL--NDLLVQEYVKLIAK---------TP-LARSAEPNE  235 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~---------~~-~~~~~~~~e  235 (266)
                      |+.+|.+.+.+++.++.+   .|++++.+.||.+.++......  ..............         .. ...+..++|
T Consensus       140 Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~D  216 (310)
T 1eq2_A          140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (310)
T ss_dssp             HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             hHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHH
Confidence            999999999999988765   5899999999999987643110  01111111111111         12 334567899


Q ss_pred             hHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          236 ISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       236 ia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +|+++++++....    |+.+++.+|..+
T Consensus       217 va~~~~~~~~~~~----~~~~~i~~~~~~  241 (310)
T 1eq2_A          217 VADVNLWFLENGV----SGIFNLGTGRAE  241 (310)
T ss_dssp             HHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             HHHHHHHHHhcCC----CCeEEEeCCCcc
Confidence            9999999986432    788999887543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.84  E-value=1.3e-20  Score=159.57  Aligned_cols=198  Identities=11%  Similarity=0.051  Sum_probs=145.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHC--CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           19 MTALVTGGTRGIGYAIVEELARF--GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      |+++||||+|+||++++++|+++  |++|++++|+++..+.+.    .  .++.++.+|++|++++.++++        .
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~--------~   66 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA--------G   66 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT--------T
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh--------c
Confidence            57999999999999999999999  999999999887654332    2  357788999999988877654        3


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      +|++||+|+...       . +      ++|+.++.++++++    ++.+.++||++||.....   ....|+.+|.+.+
T Consensus        67 ~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E  125 (287)
T 2jl1_A           67 VSKLLFISGPHY-------D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE---SIIPLAHVHLATE  125 (287)
T ss_dssp             CSEEEECCCCCS-------C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG---CCSTHHHHHHHHH
T ss_pred             CCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CCCchHHHHHHHH
Confidence            899999999521       1 1      56888888887776    455567999999987642   2348999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh----cCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA----KTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      .+++.       .|++++.+.||++.++.....+    .........    ......+..++|+|+++++++....  .+
T Consensus       126 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~  192 (287)
T 2jl1_A          126 YAIRT-------TNIPYTFLRNALYTDFFVNEGL----RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--HE  192 (287)
T ss_dssp             HHHHH-------TTCCEEEEEECCBHHHHSSGGG----HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CT
T ss_pred             HHHHH-------cCCCeEEEECCEeccccchhhH----HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--CC
Confidence            98863       5899999999998765422211    111111000    1122367789999999999996532  47


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      |+.+++.||..+
T Consensus       193 g~~~~i~~~~~~  204 (287)
T 2jl1_A          193 NKTYNLVSNQPW  204 (287)
T ss_dssp             TEEEEECCSSCB
T ss_pred             CcEEEecCCCcC
Confidence            999999988543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.83  E-value=9.1e-20  Score=172.77  Aligned_cols=177  Identities=19%  Similarity=0.138  Sum_probs=132.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +.+++|++|||||+|+||++++++|+++|++|++++|+.....+..+.+.. .+.++.++.+|++|++++++++++.   
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence            456789999999999999999999999999999999875432222222221 1356888999999999988887642   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------  161 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------  161 (266)
                         ++|+|||+||......    ..+..++.+++|+.++.++++++    ++.+.++||++||.+.+..           
T Consensus        84 ---~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~  152 (699)
T 1z45_A           84 ---KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIP  152 (699)
T ss_dssp             ---CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBC
T ss_pred             ---CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCccccccCCcc
Confidence               5899999999754321    12334567999999999997765    4445679999999765421           


Q ss_pred             ----CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCC
Q 024551          162 ----IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQI  205 (266)
Q Consensus       162 ----~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~  205 (266)
                          ..+...|+.+|++.+.+++.++.++ ..|+++..+.|+.+..+.
T Consensus       153 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~  199 (699)
T 1z45_A          153 EECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAH  199 (699)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCC
T ss_pred             ccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCC
Confidence                1234689999999999999998775 467999999998887653

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.83  E-value=5.7e-20  Score=154.38  Aligned_cols=192  Identities=16%  Similarity=0.126  Sum_probs=139.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +++||||+|+||++++++|+ +|++|++++|+++. +        .+     +.+|++|+++++++++..      ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~~-----~~~Dl~~~~~~~~~~~~~------~~d~   60 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------GG-----YKLDLTDFPRLEDFIIKK------RPDV   60 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------TC-----EECCTTSHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------CC-----ceeccCCHHHHHHHHHhc------CCCE
Confidence            69999999999999999999 58999999998742 0        11     789999999999888754      5899


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC----------Cchhhh
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP----------RLSAYA  169 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~----------~~~~y~  169 (266)
                      ||||||.....    .+.+++++.+++|+.++.++++++.+    .+ ++||++||...+.+.+          +...|+
T Consensus        61 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~  131 (273)
T 2ggs_A           61 IINAAAMTDVD----KCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYG  131 (273)
T ss_dssp             EEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred             EEECCcccChh----hhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence            99999975431    23467889999999999999998853    33 5999999988765433          257899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC------CCCCCCccchHHHHHHH
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP------LARSAEPNEISPLVAFL  243 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~eia~~~~~l  243 (266)
                      .+|++.+.+++.    +     ....+.|+.+..   ...+..   ..........+      ..++..++|+|++++++
T Consensus       132 ~sK~~~e~~~~~----~-----~~~~iR~~~v~G---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~  196 (273)
T 2ggs_A          132 LSKLLGETFALQ----D-----DSLIIRTSGIFR---NKGFPI---YVYKTLKEGKTVFAFKGYYSPISARKLASAILEL  196 (273)
T ss_dssp             HHHHHHHHHHCC----T-----TCEEEEECCCBS---SSSHHH---HHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC----C-----CeEEEecccccc---ccHHHH---HHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHH
Confidence            999999999987    2     234455555442   111111   10111112222      35678899999999999


Q ss_pred             hcCCCCCccccEEEeCC
Q 024551          244 CLPAASYITGQVISIDG  260 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdg  260 (266)
                      +....   +| .+++++
T Consensus       197 ~~~~~---~g-~~~i~~  209 (273)
T 2ggs_A          197 LELRK---TG-IIHVAG  209 (273)
T ss_dssp             HHHTC---CE-EEECCC
T ss_pred             HhcCc---CC-eEEECC
Confidence            97532   45 788876

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.83  E-value=4.8e-20  Score=158.49  Aligned_cols=210  Identities=13%  Similarity=0.078  Sum_probs=150.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+|++|||||+|+||++++++|+++|++|+++.|+.                    .+|++|.+++++++++.      +
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~------~   55 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE------R   55 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH------C
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc------C
Confidence            357999999999999999999999999999988863                    37999999988887753      5


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC---------------
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS---------------  161 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~---------------  161 (266)
                      +|+|||+|+.....   ....++.++.+++|+.++..+++++.    +.+.+++|++||...+..               
T Consensus        56 ~d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  128 (321)
T 1e6u_A           56 IDQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAH----QNDVNKLLFLGSSCIYPKLAKQPMAESELLQGT  128 (321)
T ss_dssp             CSEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred             CCEEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEccHHHcCCCCCCCcCccccccCC
Confidence            89999999965311   11234567889999999999988874    344569999999876532               


Q ss_pred             -CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chhHHHHHHHHh-------cC------
Q 024551          162 -IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLLVQEYVKLIA-------KT------  225 (266)
Q Consensus       162 -~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~-------~~------  225 (266)
                       .|....|+.+|.+.+.+++.++.++   |++++.+.||.+..+.......  ............       ..      
T Consensus       129 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g  205 (321)
T 1e6u_A          129 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG  205 (321)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCC
Confidence             1113589999999999999988764   7999999999999876542110  111111111110       11      


Q ss_pred             -CCCCCCCccchHHHHHHHhcCCCCC------ccccEEEeCCCc
Q 024551          226 -PLARSAEPNEISPLVAFLCLPAASY------ITGQVISIDGGY  262 (266)
Q Consensus       226 -~~~~~~~~~eia~~~~~l~s~~~~~------~~G~~l~vdgG~  262 (266)
                       ....+...+|+|++++.++......      ..|+.+++.+|.
T Consensus       206 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~  249 (321)
T 1e6u_A          206 TPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGV  249 (321)
T ss_dssp             CCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSC
T ss_pred             CEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCC
Confidence             1124557899999999988643211      236788887664

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.83  E-value=1.6e-19  Score=155.03  Aligned_cols=213  Identities=14%  Similarity=0.097  Sum_probs=150.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHC--CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           20 TALVTGGTRGIGYAIVEELARF--GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ++|||||+|+||++++++|+++  |++|++++|+.+..+           .+.++.+|++|++++++++++      .++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~------~~~   63 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK------YSI   63 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH------TTC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh------cCC
Confidence            4899999999999999999998  899999988764321           356889999999998888764      258


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC------------CCc
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI------------PRL  165 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~------------~~~  165 (266)
                      |+|||+|+.....     ..+++++.+++|+.++.++++++.    +.+.+++|++||...+...            .+.
T Consensus        64 d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           64 DAIFHLAGILSAK-----GEKDPALAYKVNMNGTYNILEAAK----QHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             CEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             cEEEECCcccCCc-----cccChHHHhhhhhHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            9999999975321     235577889999999999988874    4455799999998765432            135


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCC-CCCc-cchhHHHHHHHHhcCC---------CCCCCCcc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQIS-PPDL-NDLLVQEYVKLIAKTP---------LARSAEPN  234 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~-~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~  234 (266)
                      ..|+.+|.+.+.+++.++.+   .|++++.+.|+.+..+.. .... ...............+         ...+...+
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  211 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEK---FGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMP  211 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHH
T ss_pred             chHHHHHHHHHHHHHHHHHh---cCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHH
Confidence            78999999999999988765   479999998665544322 1111 1111111111111111         11234579


Q ss_pred             chHHHHHHHhcCC-CCCccccEEEeCCC
Q 024551          235 EISPLVAFLCLPA-ASYITGQVISIDGG  261 (266)
Q Consensus       235 eia~~~~~l~s~~-~~~~~G~~l~vdgG  261 (266)
                      |++++++.++... ..+.+|+.+++.|+
T Consensus       212 Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          212 DALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHHHhCCccccccCceEecCCc
Confidence            9999998877543 23345788888753

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.82  E-value=4.3e-20  Score=157.23  Aligned_cols=201  Identities=15%  Similarity=0.071  Sum_probs=146.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++||||+|+||++++++|+ +|++|++++|+..                 ++.+|++|++++.++++..      ++|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~------~~d   56 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL------RPD   56 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH------CCS
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc------CCC
Confidence            369999999999999999999 8999999999762                 3578999999988887743      589


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC-----------Cchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-----------RLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~-----------~~~~  167 (266)
                      ++||+||......    ..+++++.+++|+.++.++++++    ++.+ .++|++||...+.+.+           +...
T Consensus        57 ~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~  127 (299)
T 1n2s_A           57 VIVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAA----NETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNV  127 (299)
T ss_dssp             EEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHH----TTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred             EEEECcccCCHhh----hhcCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEecccEEeCCCCCCCCCCCCCCCccH
Confidence            9999999754211    12346778999999999998887    3333 4899999987654322           2568


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-------CCCCCccchHHHH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-------ARSAEPNEISPLV  240 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~eia~~~  240 (266)
                      |+.+|.+.+.+++.++.       +++.+.||.+.++.....    ............+.       ..+..++|+|+++
T Consensus       128 Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  196 (299)
T 1n2s_A          128 YGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNF----AKTMLRLAKERQTLSVINDQYGAPTGAELLADCT  196 (299)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCH----HHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcH----HHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHH
Confidence            99999999999987642       789999999988754321    11111122222221       2345589999999


Q ss_pred             HHHhcCCCCCc-cccEEEeCCCcc
Q 024551          241 AFLCLPAASYI-TGQVISIDGGYT  263 (266)
Q Consensus       241 ~~l~s~~~~~~-~G~~l~vdgG~~  263 (266)
                      ++++....... .|+.+++.+|..
T Consensus       197 ~~~~~~~~~~~~~~~~~~i~~~~~  220 (299)
T 1n2s_A          197 AHAIRVALNKPEVAGLYHLVAGGT  220 (299)
T ss_dssp             HHHHHHHHHCGGGCEEEECCCBSC
T ss_pred             HHHHHHhccccccCceEEEeCCCC
Confidence            99986432123 588899888753

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.81  E-value=1.5e-19  Score=153.01  Aligned_cols=193  Identities=14%  Similarity=0.131  Sum_probs=144.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      ++|||||+|+||++++++|+++|++|++++|.                     ++|++|.+++.++++..      ++|+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~------~~d~   59 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI------RPHI   59 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc------CCCE
Confidence            89999999999999999999999999999992                     47999999999888754      5899


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------CCchhh
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------PRLSAY  168 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~y  168 (266)
                      +||+||......    ..+++++.+++|+.++.++++++.    +.+ .++|++||...+.+.           .+...|
T Consensus        60 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           60 IIHCAAYTKVDQ----AEKERDLAYVINAIGARNVAVASQ----LVG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             EEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHH----HHT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             EEECCcccChHH----HhcCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            999999764321    124577899999999999998884    333 489999998765322           235689


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-------CCCCCccchHHHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-------ARSAEPNEISPLVA  241 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~eia~~~~  241 (266)
                      +.+|.+.+.+++.++.       +++.+.|+.+..+.....    ............+.       ..+..++|+|++++
T Consensus       131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  199 (287)
T 3sc6_A          131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNF----VKTMIRLGKEREEISVVADQIGSPTYVADLNVMIN  199 (287)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCH----HHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcH----HHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHH
Confidence            9999999999987643       468899999987653321    11111112112221       24556899999999


Q ss_pred             HHhcCCCCCccccEEEeCCCcc
Q 024551          242 FLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +++....    ++.+++.+|..
T Consensus       200 ~~~~~~~----~~~~~i~~~~~  217 (287)
T 3sc6_A          200 KLIHTSL----YGTYHVSNTGS  217 (287)
T ss_dssp             HHHTSCC----CEEEECCCBSC
T ss_pred             HHHhCCC----CCeEEEcCCCc
Confidence            9997543    56888887753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.81  E-value=2.5e-19  Score=163.76  Aligned_cols=218  Identities=12%  Similarity=0.061  Sum_probs=155.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH---HHHHHHHHH---------hcCCeeEEEeccCCCHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM---INERIQEWE---------SKGFKVTGSVCDLSFGDQREKL   85 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~---~~~~~~~l~---------~~~~~~~~~~~D~~~~~~i~~~   85 (266)
                      .|+||||||+|.||++++++|.++|++|++++|+.+.   .+.+.+.+.         ....++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4899999999999999999999999999999998773   333333332         12468999999999988776  


Q ss_pred             HHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC--CC---
Q 024551           86 IETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG--AI---  160 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~--~~---  160 (266)
                            .. ..+|+|||||+...       ....++..+++|+.++.++++++.+     ...++|++||...  ..   
T Consensus       228 ------~~-~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~~  288 (508)
T 4f6l_B          228 ------LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDID  288 (508)
T ss_dssp             ------CS-SCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECTT
T ss_pred             ------Cc-cCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCccC
Confidence                  22 57999999999753       1235677889999999999988743     3579999999876  10   


Q ss_pred             -------------CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-----hhHHHHHHHH
Q 024551          161 -------------SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-----LLVQEYVKLI  222 (266)
Q Consensus       161 -------------~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-----~~~~~~~~~~  222 (266)
                                   +......|+.+|.+.+.+++.++.    +|++++.+.||.+..+.....+..     ..........
T Consensus       289 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~  364 (508)
T 4f6l_B          289 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL  364 (508)
T ss_dssp             CSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHT
T ss_pred             CcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHH
Confidence                         012457899999999999988653    589999999999988765443211     1111111111


Q ss_pred             hc--CCC------CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          223 AK--TPL------ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       223 ~~--~~~------~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ..  .|.      ..+..++|+|+++++++....   .|+.+++.+|..
T Consensus       365 ~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~  410 (508)
T 4f6l_B          365 QLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNK  410 (508)
T ss_dssp             TCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCE
T ss_pred             HcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCC
Confidence            11  111      125567999999999996543   788999988754

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.81  E-value=5.2e-21  Score=162.18  Aligned_cols=202  Identities=11%  Similarity=0.055  Sum_probs=146.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++|++|||| +|.||++++++|+++|++|++++|+.+.+          ..++.++.+|++|++++.++++       ++
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   63 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH-------LR   63 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG-------GC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc-------CC
Confidence            457899999 59999999999999999999999987642          3578889999999998777654       46


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------CCc
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------PRL  165 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~  165 (266)
                      +|+|||+|+..         .++.+..+++|+.++.++++++    ++.+.+++|++||...+...           .+.
T Consensus        64 ~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~  130 (286)
T 3gpi_A           64 PEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK  130 (286)
T ss_dssp             CSEEEECHHHH---------HHC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC
T ss_pred             CCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC
Confidence            99999999863         2345678899999999998877    45556799999998754322           235


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHH---HhcCCCCCCCCccchHHHHHH
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKL---IAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~eia~~~~~  242 (266)
                      ..|+.+|.+.+.+ +..        ++++.+.|+.+..+....     ........   ........+..++|+|+++++
T Consensus       131 ~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  196 (286)
T 3gpi_A          131 DFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLR-----MIRQAQTPEQWPARNAWTNRIHRDDGAAFIAY  196 (286)
T ss_dssp             SHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCH-----HHHHTTCGGGSCSSBCEECEEEHHHHHHHHHH
T ss_pred             ChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchh-----HHHHHHhcccCCCcCceeEEEEHHHHHHHHHH
Confidence            6899999999988 542        889999999998765431     11110110   000112345678999999999


Q ss_pred             HhcCCCCCccccEEEeCCCcc
Q 024551          243 LCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++........|+.+++.+|..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~  217 (286)
T 3gpi_A          197 LIQQRSHAVPERLYIVTDNQP  217 (286)
T ss_dssp             HHHHHTTSCCCSEEEECCSCC
T ss_pred             HHhhhccCCCCceEEEeCCCC
Confidence            996532245688899988753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.80  E-value=1e-19  Score=153.86  Aligned_cols=194  Identities=13%  Similarity=0.081  Sum_probs=137.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHC--CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           20 TALVTGGTRGIGYAIVEELARF--GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +++||||+|+||++++++|+++  |++|++++|+++..+.+..      ..+.++.+|++|++++.++++        .+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~--------~~   66 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA------QGITVRQADYGDEAALTSALQ--------GV   66 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH------TTCEEEECCTTCHHHHHHHTT--------TC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc------CCCeEEEcCCCCHHHHHHHHh--------CC
Confidence            4899999999999999999999  9999999998876543322      257788999999988877654        47


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |++||+|+...                +.|+.++..+++++    ++.+.++||++||....   +....|+.+|.+.+.
T Consensus        67 d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           67 EKLLLISSSEV----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHAD---TSPLGLADEHIETEK  123 (286)
T ss_dssp             SEEEECC------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTT---TCCSTTHHHHHHHHH
T ss_pred             CEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCC---CCcchhHHHHHHHHH
Confidence            99999999521                13566666665554    55556799999998765   223589999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh----cCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA----KTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      +++.       .|++++.+.||++.++....     ..........    ......+..++|+|+++++++....  .+|
T Consensus       124 ~~~~-------~~~~~~ilrp~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g  189 (286)
T 2zcu_A          124 MLAD-------SGIVYTLLRNGWYSENYLAS-----APAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEG  189 (286)
T ss_dssp             HHHH-------HCSEEEEEEECCBHHHHHTT-----HHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTT
T ss_pred             HHHH-------cCCCeEEEeChHHhhhhHHH-----hHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCC
Confidence            8864       47999999999887653210     0110000000    1123456789999999999997532  479


Q ss_pred             cEEEeCCCccC
Q 024551          254 QVISIDGGYTA  264 (266)
Q Consensus       254 ~~l~vdgG~~~  264 (266)
                      +.++++||..+
T Consensus       190 ~~~~i~~~~~~  200 (286)
T 2zcu_A          190 KVYELAGDSAW  200 (286)
T ss_dssp             CEEEECCSSCB
T ss_pred             ceEEEeCCCcC
Confidence            99999998543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.80  E-value=6.9e-20  Score=157.24  Aligned_cols=212  Identities=18%  Similarity=0.130  Sum_probs=142.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh--cCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES--KGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +.+|++|||||+|+||++++++|+++|++|++++|+........+.+..  ...++.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            4578999999999999999999999999999999976510000011110  0123444445544                


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------  162 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------  162 (266)
                        .+|+|||+|+..........    ....++ |+.++.++++++.    +.+..++|++||...+...           
T Consensus        69 --~~d~vi~~a~~~~~~~~~~~----~~~~~~-n~~~~~~ll~a~~----~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~  137 (321)
T 3vps_A           69 --DVRLVYHLASHKSVPRSFKQ----PLDYLD-NVDSGRHLLALCT----SVGVPKVVVGSTCEVYGQADTLPTPEDSPL  137 (321)
T ss_dssp             --TEEEEEECCCCCCHHHHTTS----TTTTHH-HHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             --cCCEEEECCccCChHHHHhC----HHHHHH-HHHHHHHHHHHHH----HcCCCeEEEecCHHHhCCCCCCCCCCCCCC
Confidence              58999999997643211111    223455 9999999888874    4445799999998754322           


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhccCCc-EEEEEecCcccCCCCCCCccchhHHHHHHHHhcC---------CCCCCCC
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWATDSI-RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT---------PLARSAE  232 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~~~gi-~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  232 (266)
                      .+...|+.+|.+.+.+++.++.+   .|+ +++.+.|+.+..+......  .............         ....+..
T Consensus       138 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  212 (321)
T 3vps_A          138 SPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDA--LVPRLCANLLTRNELPVEGDGEQRRDFTY  212 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTS--HHHHHHHHHHHHSEEEEETTSCCEECEEE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCC--hHHHHHHHHHcCCCeEEeCCCCceEceEE
Confidence            23578999999999999998776   578 9999999999987654311  1111111111111         1224567


Q ss_pred             ccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          233 PNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       233 ~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ++|+|+++++++.....   | .+++.+|..
T Consensus       213 v~Dva~~~~~~~~~~~~---g-~~~i~~~~~  239 (321)
T 3vps_A          213 ITDVVDKLVALANRPLP---S-VVNFGSGQS  239 (321)
T ss_dssp             HHHHHHHHHHGGGSCCC---S-EEEESCSCC
T ss_pred             HHHHHHHHHHHHhcCCC---C-eEEecCCCc
Confidence            89999999999976543   7 899988764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.80  E-value=9.9e-19  Score=149.41  Aligned_cols=215  Identities=17%  Similarity=0.096  Sum_probs=149.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++|++|||||+|.||++++++|.++|+      +..           .....+.++.+|++|++++.++++.      
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----------~~~~~~~~~~~D~~d~~~~~~~~~~------   59 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-----------EDWVFVSSKDADLTDTAQTRALFEK------   59 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-----------CEEEECCTTTCCTTSHHHHHHHHHH------
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-----------ccccccCceecccCCHHHHHHHHhh------
Confidence            46789999999999999999999999998      110           0012344557899999999888874      


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-------------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-------------  161 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-------------  161 (266)
                      .++|+|||+|+......   .+.++.++.+++|+.++.++++++    ++.+.+++|++||...+..             
T Consensus        60 ~~~d~Vih~A~~~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  132 (319)
T 4b8w_A           60 VQPTHVIHLAAMVGGLF---RNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCIFPDKTTYPIDETMIHN  132 (319)
T ss_dssp             SCCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGGSCSSCCSSBCGGGGGB
T ss_pred             cCCCEEEECceeccccc---ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhhcCCCCCCCcccccccc
Confidence            25999999999743111   122345678999999999998887    4445579999999865422             


Q ss_pred             ---CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chhHHHHHH----HHhcCCC-----
Q 024551          162 ---IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLLVQEYVK----LIAKTPL-----  227 (266)
Q Consensus       162 ---~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~----~~~~~~~-----  227 (266)
                         .|....|+.+|.+.+.+++.++.+.   |++++.+.|+.+..+.......  .........    .....++     
T Consensus       133 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (319)
T 4b8w_A          133 GPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGT  209 (319)
T ss_dssp             SCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESC
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCC
Confidence               1222369999999999999988774   7999999999998876543211  111111111    2222221     


Q ss_pred             ----CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          228 ----ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       228 ----~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                          +.+..++|+|++++.++.... ...|+.+++.+|..
T Consensus       210 g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~  248 (319)
T 4b8w_A          210 GNPRRQFIYSLDLAQLFIWVLREYN-EVEPIILSVGEEDE  248 (319)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCC-CSSCEEECCCGGGC
T ss_pred             CCeeEEEEeHHHHHHHHHHHHhccc-cCCceEEEecCCCc
Confidence                234678999999999986422 24577888876643

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.78  E-value=3.3e-19  Score=151.94  Aligned_cols=206  Identities=14%  Similarity=0.053  Sum_probs=139.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|+++||||+|+||++++++|+++| ++|++++|+++....  +.+..  ..+.++++|++|++++.++++        .
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~~--------~   72 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELALN--------G   72 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHHT--------T
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHHh--------c
Confidence            5899999999999999999999999 999999998765421  23332  257788999999999887765        3


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC--CCCCchhhhhhHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI--SIPRLSAYAASKGA  174 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~--~~~~~~~y~~sK~a  174 (266)
                      +|++||++|.....     .       .+.|+.    .++.+++.+++.+.++||++|+.....  ..+....|..+|.+
T Consensus        73 ~d~vi~~a~~~~~~-----~-------~~~~~~----~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~  136 (299)
T 2wm3_A           73 AYATFIVTNYWESC-----S-------QEQEVK----QGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGE  136 (299)
T ss_dssp             CSEEEECCCHHHHT-----C-------HHHHHH----HHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHH
T ss_pred             CCEEEEeCCCCccc-----c-------chHHHH----HHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHH
Confidence            89999999853210     1       123333    445555556666678999966543221  11224679999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC----CCCCCccchHHHHHHHhcCCCCC
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL----ARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ++.+.+.       .|++++.+.||++.+++............ .......|.    ..+..++|+|+++..++.+.. .
T Consensus       137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~  207 (299)
T 2wm3_A          137 VEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDG-KSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE-K  207 (299)
T ss_dssp             HHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTS-SSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-H
T ss_pred             HHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCC-CEEEEEecCCCCccceecHHHHHHHHHHHHcChh-h
Confidence            9998874       37999999999998875432111100000 000001122    245688999999999986432 2


Q ss_pred             ccccEEEeCC
Q 024551          251 ITGQVISIDG  260 (266)
Q Consensus       251 ~~G~~l~vdg  260 (266)
                      ..|+.+.+.|
T Consensus       208 ~~g~~~~~~g  217 (299)
T 2wm3_A          208 YVGQNIGLST  217 (299)
T ss_dssp             HTTCEEECCS
T ss_pred             hCCeEEEeee
Confidence            3688888876

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.76  E-value=9.2e-18  Score=142.25  Aligned_cols=195  Identities=16%  Similarity=0.113  Sum_probs=132.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           20 TALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +++||||+|+||++++++|.++ |++|++++|+++..+.+      ...++.++++|++|++++.++++        .+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~--------~~d   67 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK--------GMD   67 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT--------TCS
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh--------CCC
Confidence            5999999999999999999998 99999999998764322      12468899999999998877664        489


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      ++||++|.....              ..|+.++    +.+++.+++.+.++||++||.......+    |..++...   
T Consensus        68 ~vi~~a~~~~~~--------------~~~~~~~----~~l~~aa~~~gv~~iv~~Ss~~~~~~~~----~~~~~~~~---  122 (289)
T 3e48_A           68 TVVFIPSIIHPS--------------FKRIPEV----ENLVYAAKQSGVAHIIFIGYYADQHNNP----FHMSPYFG---  122 (289)
T ss_dssp             EEEECCCCCCSH--------------HHHHHHH----HHHHHHHHHTTCCEEEEEEESCCSTTCC----STTHHHHH---
T ss_pred             EEEEeCCCCccc--------------hhhHHHH----HHHHHHHHHcCCCEEEEEcccCCCCCCC----CccchhHH---
Confidence            999999964321              1144444    4455555777678999999976443322    33333211   


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCC----CCCccchHHHHHHHhcCCCCCcccc
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR----SAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                        .+...+...|++++.+.||++.+++..     .............+.++    +..++|+|+++++++.+...+  |+
T Consensus       123 --~~e~~~~~~g~~~~ilrp~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g~  193 (289)
T 3e48_A          123 --YASRLLSTSGIDYTYVRMAMYMDPLKP-----YLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--GK  193 (289)
T ss_dssp             --HHHHHHHHHCCEEEEEEECEESTTHHH-----HHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--TC
T ss_pred             --HHHHHHHHcCCCEEEEeccccccccHH-----HHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--Cc
Confidence              222334456899999999999876321     11110011111223333    678999999999999765433  88


Q ss_pred             EEEeCCCcc
Q 024551          255 VISIDGGYT  263 (266)
Q Consensus       255 ~l~vdgG~~  263 (266)
                      .+++. |..
T Consensus       194 ~~~~~-~~~  201 (289)
T 3e48_A          194 RYLLS-GYS  201 (289)
T ss_dssp             EEEEC-CEE
T ss_pred             eEEeC-CCc
Confidence            99998 643

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.75  E-value=2.7e-18  Score=150.00  Aligned_cols=207  Identities=14%  Similarity=0.044  Sum_probs=140.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEecc-CCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD-LSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++|+++||||+|+||++++++|+++|++|++++|+++...  .+.+.. ..++.++.+| ++|++++.++++       
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-------   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE-------   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh-------
Confidence            34688999999999999999999999999999999877542  123332 2367888999 999999887764       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCC-CCCCCCCchhhhhhH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVA-GAISIPRLSAYAASK  172 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~-~~~~~~~~~~y~~sK  172 (266)
                       .+|++|||++...               .+.|..+     +.+++.+++.+ .++||++||.. ...+.+....|..+|
T Consensus        73 -~~d~Vi~~a~~~~---------------~~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK  131 (352)
T 1xgk_A           73 -GAHLAFINTTSQA---------------GDEIAIG-----KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPK  131 (352)
T ss_dssp             -TCSEEEECCCSTT---------------SCHHHHH-----HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHH
T ss_pred             -cCCEEEEcCCCCC---------------cHHHHHH-----HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHH
Confidence             3799999987531               0224333     44455556665 67999999986 333444557899999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCC---CccchhHHHHHHHHhcCC-----CCCCCCc-cchHHHHHHH
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPP---DLNDLLVQEYVKLIAKTP-----LARSAEP-NEISPLVAFL  243 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~-~eia~~~~~l  243 (266)
                      .+.+.+++..       |++++.+.||++.+.....   .+....... .......+     ...+..+ +|+|++++.+
T Consensus       132 ~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~  203 (352)
T 1xgk_A          132 FTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPD-GTFEWHAPFDPDIPLPWLDAEHDVGPALLQI  203 (352)
T ss_dssp             HHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTT-SCEEEEESSCTTSCEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCC-CceEEeeccCCCCceeeEecHHHHHHHHHHH
Confidence            9999998752       7999999999876543221   000000000 00000001     1124567 8999999999


Q ss_pred             hcCCCCCccccEEEeCCC
Q 024551          244 CLPAASYITGQVISIDGG  261 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG  261 (266)
                      +.+......|+.+.+.++
T Consensus       204 l~~~~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          204 FKDGPQKWNGHRIALTFE  221 (352)
T ss_dssp             HHHCHHHHTTCEEEECSE
T ss_pred             HhCCchhhCCeEEEEecC
Confidence            965433456888888764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.74  E-value=8e-17  Score=141.24  Aligned_cols=192  Identities=16%  Similarity=0.151  Sum_probs=142.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ++++||||+|.||++++++|+++|+ +|+..+|+                         +|+++++++++        .+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~--------~~   47 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL--------KA   47 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH--------HC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc--------cC
Confidence            3699999999999999999999998 77776664                         67778777776        38


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCC-eEEEEecCCCCCCCCCchhhhhhHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKGAIN  176 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~iv~vss~~~~~~~~~~~~y~~sK~al~  176 (266)
                      |++||+||.....        ++++.+++|+.++..+++++    ++.+.. ++|++||.....    ...|+.+|.+.+
T Consensus        48 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E  111 (369)
T 3st7_A           48 DFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESKLQGE  111 (369)
T ss_dssp             SEEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHHHHHH
T ss_pred             CEEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHHHHHH
Confidence            9999999976432        24456899999999998877    444444 899999987654    678999999999


Q ss_pred             HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCC--------CCCCccchHHHHHHHhcCCC
Q 024551          177 QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA--------RSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       177 ~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~eia~~~~~l~s~~~  248 (266)
                      .+++.++.+.   |+++..+.|+.+..+...+.+...............+..        .+..++|+|++++.++....
T Consensus       112 ~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  188 (369)
T 3st7_A          112 QLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP  188 (369)
T ss_dssp             HHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCc
Confidence            9999988773   689999999999887655443222222222222222221        34557999999999996543


Q ss_pred             CCccccEEEeCCCcc
Q 024551          249 SYITGQVISIDGGYT  263 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~  263 (266)
                      . ..|+.+++.+|..
T Consensus       189 ~-~~~~~~~i~~~~~  202 (369)
T 3st7_A          189 T-IENGVPTVPNVFK  202 (369)
T ss_dssp             C-EETTEECCSCCEE
T ss_pred             c-cCCceEEeCCCCc
Confidence            2 2488888887643

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.73  E-value=2.5e-17  Score=139.27  Aligned_cols=195  Identities=10%  Similarity=-0.035  Sum_probs=136.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++++|||| |.||++++++|.++|++|++++|+++..+.+..      ..+.++.+|++|.+            + ..+|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~-~~~d   65 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------L-DGVT   65 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------C-TTCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------c-CCCC
Confidence            68999998 999999999999999999999999887654432      36888999999832            3 4689


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh--cCCCeEEEEecCCCCCCC-----------CCc
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA--SGNASIVFMSSVAGAISI-----------PRL  165 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~--~~~g~iv~vss~~~~~~~-----------~~~  165 (266)
                      ++||+|+.....     ..                .++.++..+++  .+..++|++||...+...           .+.
T Consensus        66 ~vi~~a~~~~~~-----~~----------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~  124 (286)
T 3ius_A           66 HLLISTAPDSGG-----DP----------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT  124 (286)
T ss_dssp             EEEECCCCBTTB-----CH----------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC
T ss_pred             EEEECCCccccc-----cH----------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC
Confidence            999999965432     00                12344455555  445799999997654322           224


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      ..|+.+|.+.+.+++.+      .|++++.+.||.+..+.......... ..............+...+|+|+++++++.
T Consensus       125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~  197 (286)
T 3ius_A          125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGK-GGIRRIIKPGQVFSRIHVEDIAQVLAASMA  197 (286)
T ss_dssp             SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSS-SCCCEEECTTCCBCEEEHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhc-CCccccCCCCcccceEEHHHHHHHHHHHHh
Confidence            57999999999999876      68999999999998765322110000 000000000122345667999999999997


Q ss_pred             CCCCCccccEEEeCCCccC
Q 024551          246 PAASYITGQVISIDGGYTA  264 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~  264 (266)
                      ...   .|+.+++.+|..+
T Consensus       198 ~~~---~g~~~~i~~~~~~  213 (286)
T 3ius_A          198 RPD---PGAVYNVCDDEPV  213 (286)
T ss_dssp             SCC---TTCEEEECCSCCB
T ss_pred             CCC---CCCEEEEeCCCCc
Confidence            543   6889999887643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.73  E-value=1.6e-17  Score=141.80  Aligned_cols=197  Identities=14%  Similarity=0.096  Sum_probs=130.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-------hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-------NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +|+++||||+|+||++++++|+++|++|++++|+.       ++.+.+ +.+..  ..+.++++|++|++++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~~---   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAIK---   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHT---
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHHh---
Confidence            47899999999999999999999999999999986       444433 33333  347788999999998877765   


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCC------CCC
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAI------SIP  163 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~------~~~  163 (266)
                           .+|+|||++|...                   +.+...++++    +++.+ .+++|.  |..+..      ..|
T Consensus        76 -----~~d~vi~~a~~~~-------------------~~~~~~l~~a----a~~~g~v~~~v~--S~~g~~~~~~~~~~p  125 (307)
T 2gas_A           76 -----QVDIVICAAGRLL-------------------IEDQVKIIKA----IKEAGNVKKFFP--SEFGLDVDRHDAVEP  125 (307)
T ss_dssp             -----TCSEEEECSSSSC-------------------GGGHHHHHHH----HHHHCCCSEEEC--SCCSSCTTSCCCCTT
T ss_pred             -----CCCEEEECCcccc-------------------cccHHHHHHH----HHhcCCceEEee--cccccCcccccCCCc
Confidence                 3899999999642                   3344444444    45555 567773  433321      123


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch--h-HHHHHH-HHhcCCCCCCCCccchHHH
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL--L-VQEYVK-LIAKTPLARSAEPNEISPL  239 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~--~-~~~~~~-~~~~~~~~~~~~~~eia~~  239 (266)
                      ....| .+|.+++.+.+.       .|++++.++||++.+.+........  . ...... .........+.+++|+|++
T Consensus       126 ~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          126 VRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred             chhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence            34679 999999988763       3799999999999876532211100  0 000000 0001122345688999999


Q ss_pred             HHHHhcCCCCCccccEEEeCC
Q 024551          240 VAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       240 ~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      +..++.+..  ..|+.+.+.|
T Consensus       198 ~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          198 TIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHcCcc--ccCceEEEeC
Confidence            999997542  2467777664

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.71  E-value=1.6e-16  Score=138.16  Aligned_cols=201  Identities=11%  Similarity=0.021  Sum_probs=136.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh----hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ----NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ..++++||||+|.||++++++|+++|++|++++|+.    ++.+ ..+.+..  .++.++++|++|.+++.+++++.   
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhhC---
Confidence            357899999999999999999999999999999976    3332 2233333  46888999999999998888742   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCC----CCCCchh
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAI----SIPRLSA  167 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~----~~~~~~~  167 (266)
                         .+|+|||+++..                   |+.++..+++++    ++.+ ..++|+ |+.....    +.+....
T Consensus        83 ---~~d~Vi~~a~~~-------------------n~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~  135 (346)
T 3i6i_A           83 ---EIDIVVSTVGGE-------------------SILDQIALVKAM----KAVGTIKRFLP-SEFGHDVNRADPVEPGLN  135 (346)
T ss_dssp             ---TCCEEEECCCGG-------------------GGGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTTCCCCTTHHH
T ss_pred             ---CCCEEEECCchh-------------------hHHHHHHHHHHH----HHcCCceEEee-cccCCCCCccCcCCCcch
Confidence               589999999962                   788888877776    4444 457765 4433221    2245578


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHH-HHHH---HHhcCCCCCCCCccchHHHHHHH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ-EYVK---LIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      |..+|.+.+.+.+.       .|+++..+.||++...+........... ....   .........+..++|+|+.++.+
T Consensus       136 y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~  208 (346)
T 3i6i_A          136 MYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKT  208 (346)
T ss_dssp             HHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHH
Confidence            99999999888764       5799999999998875543321110000 0000   00011123467789999999999


Q ss_pred             hcCCCCCccccEEEeC
Q 024551          244 CLPAASYITGQVISID  259 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vd  259 (266)
                      +.+..  ..|+.+.+-
T Consensus       209 l~~~~--~~~~~~~i~  222 (346)
T 3i6i_A          209 VDDVR--TLNKSVHFR  222 (346)
T ss_dssp             TTCGG--GTTEEEECC
T ss_pred             HhCcc--ccCeEEEEe
Confidence            96542  235566654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.70  E-value=2.3e-16  Score=137.65  Aligned_cols=214  Identities=13%  Similarity=0.079  Sum_probs=141.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCC-----CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFG-----ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G-----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +|+++||||+|.||++++++|+++|     ++|++++|+.+...       ....++.++.+|++|++++.++++..   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~---   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL---   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence            5789999999999999999999999     99999999865432       12346888999999999887776522   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEE-------EEecCCCCCCC---
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIV-------FMSSVAGAISI---  162 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv-------~vss~~~~~~~---  162 (266)
                        .++|++||+||...         ++.++.+++|+.++.++++++.+...  +..++|       ++||...+...   
T Consensus        71 --~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vyg~~~~~  137 (364)
T 2v6g_A           71 --TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESYGKIESH  137 (364)
T ss_dssp             --TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred             --CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhccccccC
Confidence              24999999999652         13567889999999999988854211  345776       68886543211   


Q ss_pred             -----------CCchhhhhhHHHHHHHHHHHHHHhccCC-cEEEEEecCcccCCCCCCCccchhHH-HHHHH--HhcCCC
Q 024551          163 -----------PRLSAYAASKGAINQLTKNLACEWATDS-IRVNAVSPWAVNTQISPPDLNDLLVQ-EYVKL--IAKTPL  227 (266)
Q Consensus       163 -----------~~~~~y~~sK~al~~~~~~~a~el~~~g-i~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~~--~~~~~~  227 (266)
                                 +....|    .+.+.+++.++.   .+| +++..+.|+.+..+............ .....  ....+.
T Consensus       138 ~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~  210 (364)
T 2v6g_A          138 DPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVL  210 (364)
T ss_dssp             CSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCB
T ss_pred             CCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCce
Confidence                       112345    234444444432   245 99999999999987654322211111 01111  122221


Q ss_pred             C---------CCCCc---cchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          228 A---------RSAEP---NEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       228 ~---------~~~~~---~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      .         .+..+   +|+|++++.++...  ...|+.+++.++..
T Consensus       211 ~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~  256 (364)
T 2v6g_A          211 RFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDV  256 (364)
T ss_dssp             CCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCC
T ss_pred             ecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCc
Confidence            1         11233   77999999888543  23688999988753

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.69  E-value=1.4e-16  Score=136.32  Aligned_cols=202  Identities=12%  Similarity=0.070  Sum_probs=131.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-----hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-----NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .|+++||||+|+||++++++|+++|++|++++|+.     ++.+.+ +.+.  ...+.++++|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~d~~~l~~~~~-----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK--QLGAKLIEASLDDHQRLVDALK-----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH--hCCeEEEeCCCCCHHHHHHHHh-----
Confidence            36899999999999999999999999999999984     333222 2232  2457889999999998887765     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCC------CCCc
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAIS------IPRL  165 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~------~~~~  165 (266)
                         .+|+|||+++.....               .|+.+...+++++    ++.+ .+++|+ |+......      .|..
T Consensus        76 ---~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~  132 (313)
T 1qyd_A           76 ---QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGS  132 (313)
T ss_dssp             ---TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTT
T ss_pred             ---CCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCc
Confidence               389999999975321               2666766665555    5555 568875 33321111      2335


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch----hHHHHHHH-HhcCCCCCCCCccchHHHH
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL----LVQEYVKL-IAKTPLARSAEPNEISPLV  240 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~eia~~~  240 (266)
                      ..| .+|.+++.+.+.       .|++++.+.||++.+.+........    ........ ........+..++|+|+++
T Consensus       133 ~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~  204 (313)
T 1qyd_A          133 ITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYT  204 (313)
T ss_dssp             HHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHH
T ss_pred             chH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHH
Confidence            678 999999888752       4789999999988754322111000    00000000 0001112456789999999


Q ss_pred             HHHhcCCCCCccccEEEeCC
Q 024551          241 AFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       241 ~~l~s~~~~~~~G~~l~vdg  260 (266)
                      ..++.+..  ..|+.+.+.|
T Consensus       205 ~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          205 IKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HHHTTCGG--GSSSEEECCC
T ss_pred             HHHHhCcc--cCCceEEEeC
Confidence            99996542  2366666654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.66  E-value=3e-17  Score=141.11  Aligned_cols=195  Identities=14%  Similarity=0.107  Sum_probs=126.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-h----HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-N----MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~----~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .|+++||||+|+||++++++|+++|++|++++|+. +    ...+..+.+..  ..+.++++|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc-----
Confidence            46799999999999999999999999999999986 1    22222233333  357889999999998887765     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCC---C---CCc
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAIS---I---PRL  165 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~---~---~~~  165 (266)
                         .+|+|||+++...                   +.+...+    ++.+++.+ .++||  .|..+...   .   |..
T Consensus        77 ---~~d~vi~~a~~~~-------------------~~~~~~l----~~aa~~~g~v~~~v--~S~~g~~~~~~~~~~p~~  128 (321)
T 3c1o_A           77 ---QVDIVISALPFPM-------------------ISSQIHI----INAIKAAGNIKRFL--PSDFGCEEDRIKPLPPFE  128 (321)
T ss_dssp             ---TCSEEEECCCGGG-------------------SGGGHHH----HHHHHHHCCCCEEE--CSCCSSCGGGCCCCHHHH
T ss_pred             ---CCCEEEECCCccc-------------------hhhHHHH----HHHHHHhCCccEEe--ccccccCccccccCCCcc
Confidence               3899999999642                   3333344    44445555 56887  34333211   1   124


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC-------ccchhHHHHHHHHhcCCCCCCCCccchHH
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD-------LNDLLVQEYVKLIAKTPLARSAEPNEISP  238 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~eia~  238 (266)
                      ..| .+|.+++.+.+.       .|++++.+.||++.+.+....       ......   ...........+..++|+|+
T Consensus       129 ~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~Dva~  197 (321)
T 3c1o_A          129 SVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDI---VIYGTGETKFVLNYEEDIAK  197 (321)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCE---EEETTSCCEEEEECHHHHHH
T ss_pred             hHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCce---EEecCCCcceeEeeHHHHHH
Confidence            579 999999988863       368888899998765321000       000000   00000111234678899999


Q ss_pred             HHHHHhcCCCCCccccEEEeCC
Q 024551          239 LVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       239 ~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      ++.+++.+..  ..|+.+.+.|
T Consensus       198 ~~~~~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          198 YTIKVACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHHHHHHCGG--GTTEEEECCC
T ss_pred             HHHHHHhCcc--ccCeEEEEeC
Confidence            9999997543  2477777765

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.63  E-value=2.5e-16  Score=134.41  Aligned_cols=199  Identities=11%  Similarity=0.087  Sum_probs=125.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH-----HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM-----INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .|+++||||+|+||++++++|+++|++|++++|+...     ..+..+.+.  ...+.++++|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc-----
Confidence            4689999999999999999999999999999997431     111222332  2457889999999999888776     


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCC-----CCCch
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAIS-----IPRLS  166 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~-----~~~~~  166 (266)
                         .+|++||+++...                   +.+...+    ++.+++.+ .+++|+ |+.+....     .|...
T Consensus        77 ---~~d~vi~~a~~~~-------------------~~~~~~l----~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~  129 (308)
T 1qyc_A           77 ---NVDVVISTVGSLQ-------------------IESQVNI----IKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKS  129 (308)
T ss_dssp             ---TCSEEEECCCGGG-------------------SGGGHHH----HHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHH
T ss_pred             ---CCCEEEECCcchh-------------------hhhHHHH----HHHHHhcCCCceEee-cccccCccccccCCcchh
Confidence               3899999998532                   2333344    44445555 568873 43321211     12245


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch---hHHHHHH-HHhcCCCCCCCCccchHHHHHH
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL---LVQEYVK-LIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      .| .+|.+++.+.+.       .|++++.+.||++.+.+........   ....... .........+..++|+|+++..
T Consensus       130 ~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (308)
T 1qyc_A          130 VF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIK  201 (308)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHT
T ss_pred             HH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHH
Confidence            78 999999888764       3688889999988654322111000   0000000 0000112245678999999999


Q ss_pred             HhcCCCCCccccEEEeCC
Q 024551          243 LCLPAASYITGQVISIDG  260 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdg  260 (266)
                      ++.+..  ..|+.+.+.|
T Consensus       202 ~l~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          202 AVDDPR--TLNKTLYLRL  217 (308)
T ss_dssp             TSSCGG--GTTEEEECCC
T ss_pred             HHhCcc--ccCeEEEEeC
Confidence            986532  2366676654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.63  E-value=2.8e-15  Score=137.18  Aligned_cols=202  Identities=14%  Similarity=0.077  Sum_probs=137.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ++++|||||+|.||++++++|+++|++|++++|+.+..              ..+.+|+.+..         .+.+ ..+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------~~v~~d~~~~~---------~~~l-~~~  202 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------GKRFWDPLNPA---------SDLL-DGA  202 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------TCEECCTTSCC---------TTTT-TTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------cceeecccchh---------HHhc-CCC
Confidence            67999999999999999999999999999999987642              12567776431         2233 469


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------CCCch
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------IPRLS  166 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~  166 (266)
                      |+|||+||.....   ..+.+..+..+++|+.++.++++++.   ++.+.+++|++||...+..           ..+..
T Consensus       203 D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~  276 (516)
T 3oh8_A          203 DVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDD  276 (516)
T ss_dssp             SEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred             CEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence            9999999975433   33455678899999999999998743   3445579999999765430           11345


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHh---cCCC------CCCCCccchH
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIA---KTPL------ARSAEPNEIS  237 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~eia  237 (266)
                      .|+.+|...+.+.+.    +...|++++.+.||.+.++...      ..........   ....      ..+..++|+|
T Consensus       277 ~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~------~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva  346 (516)
T 3oh8_A          277 FLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGG------MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLT  346 (516)
T ss_dssp             HHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBS------HHHHHHHTTC---CCCCTTSCCEECEEEHHHHH
T ss_pred             hHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCC------hHHHHHHHHHhCCCcccCCCCceEceEeHHHHH
Confidence            688888877766543    3456899999999999886521      1111111100   0111      2356679999


Q ss_pred             HHHHHHhcCCCCCccccEEEeCCCc
Q 024551          238 PLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      +++++++....  ..| .+++.++.
T Consensus       347 ~ai~~~l~~~~--~~g-~~ni~~~~  368 (516)
T 3oh8_A          347 DIYYRAIVDAQ--ISG-PINAVAPN  368 (516)
T ss_dssp             HHHHHHHHCTT--CCE-EEEESCSC
T ss_pred             HHHHHHHhCcc--cCC-cEEEECCC
Confidence            99999996533  345 45655553

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.62  E-value=9.4e-17  Score=137.90  Aligned_cols=194  Identities=14%  Similarity=0.113  Sum_probs=124.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |+++||||+|+||++++++|+++|++|++++|+.+...+..+++..  ..+.++++|++|++++.++++        .+|
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~--------~~d   81 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMK--------KVD   81 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT--------TCS
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHc--------CCC
Confidence            6799999999999999999999999999999987522222233333  357788999999998887765        389


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCC---C---CCchhhhhh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAIS---I---PRLSAYAAS  171 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~---~---~~~~~y~~s  171 (266)
                      +|||+++...                   +.+...+    ++.+++.+ .+++|+ |+ .+...   .   |....| .+
T Consensus        82 ~vi~~a~~~~-------------------~~~~~~l----~~aa~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~s  135 (318)
T 2r6j_A           82 VVISALAFPQ-------------------ILDQFKI----LEAIKVAGNIKRFLP-SD-FGVEEDRINALPPFEALI-ER  135 (318)
T ss_dssp             EEEECCCGGG-------------------STTHHHH----HHHHHHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-HH
T ss_pred             EEEECCchhh-------------------hHHHHHH----HHHHHhcCCCCEEEe-ec-cccCcccccCCCCcchhH-HH
Confidence            9999998532                   2333344    44445555 567874 33 33211   1   123468 99


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCC----CccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPP----DLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |.+++.+.+.       .|+++..+.||++...+...    .......   ...........+..++|+|+++..++.+.
T Consensus       136 K~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (318)
T 2r6j_A          136 KRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEI---TVYGTGEAKFAMNYEQDIGLYTIKVATDP  205 (318)
T ss_dssp             HHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEE---EEETTSCCEEEEECHHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCce---EEecCCCceeeEeeHHHHHHHHHHHhcCc
Confidence            9999888763       47888899999876421100    0000000   00000011224567899999999999654


Q ss_pred             CCCccccEEEeCC
Q 024551          248 ASYITGQVISIDG  260 (266)
Q Consensus       248 ~~~~~G~~l~vdg  260 (266)
                      .  ..|+.+.+.|
T Consensus       206 ~--~~~~~~~~~g  216 (318)
T 2r6j_A          206 R--ALNRVVIYRP  216 (318)
T ss_dssp             G--GTTEEEECCC
T ss_pred             c--ccCeEEEecC
Confidence            2  2366666654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.48  E-value=1.1e-14  Score=123.64  Aligned_cols=111  Identities=20%  Similarity=0.276  Sum_probs=88.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++||+++||||++|+|++++++|+++|++|++++|+.++.+++.+++... ..+.++.+|++|+++++++++      
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK------  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT------
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH------
Confidence            4578999999999999999999999999999999999999998888887653 245677899999988776554      


Q ss_pred             CCcccEEEecccccc-ccCCCCCCH-HHHHHHhccchhhHHH
Q 024551           94 DGKLNILVNNAALVV-MKRATEYTL-EEYSSVMSTNVESSYH  133 (266)
Q Consensus        94 ~~~id~lv~~ag~~~-~~~~~~~~~-~~~~~~~~~n~~~~~~  133 (266)
                        .+|++|||+|... ..+..+.+. ++|+..+++|+.+++.
T Consensus       188 --~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~~  227 (287)
T 1lu9_A          188 --GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLG  227 (287)
T ss_dssp             --TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSCS
T ss_pred             --hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhHH
Confidence              3799999998542 222222333 5566789999998873

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.37  E-value=6e-11  Score=100.62  Aligned_cols=201  Identities=16%  Similarity=0.114  Sum_probs=125.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      ++|||||||-||++++++|.++|++|++++|++..            ..+.   .|     .+.      .+.. ..+|.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~~~---~~-----~~~------~~~l-~~~d~   54 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GRIT---WD-----ELA------ASGL-PSCDA   54 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TEEE---HH-----HHH------HHCC-CSCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Ceee---cc-----hhh------Hhhc-cCCCE
Confidence            69999999999999999999999999999997642            1211   11     110      1223 46899


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------CCchhh
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------PRLSAY  168 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~y  168 (266)
                      +||.||..........+.+..+..++.|+.++-.+.+.+..  ...+..++|+.||...+...           .....|
T Consensus        55 vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~--~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~  132 (298)
T 4b4o_A           55 AVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITK--APQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFF  132 (298)
T ss_dssp             EEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH--CSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHH
T ss_pred             EEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHH--hCCCceEEEEEeeeeeecCCCCCcccccCCccccchh
Confidence            99999865444444457777788899999988887766532  12223457777776654321           122345


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhc---CCC------CCCCCccchHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK---TPL------ARSAEPNEISPL  239 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~eia~~  239 (266)
                      +..|...+..     ......++++..+.||.+..+..      ............   .+.      ..+...+|++++
T Consensus       133 ~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~------~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a  201 (298)
T 4b4o_A          133 SNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGG------GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGI  201 (298)
T ss_dssp             HHHHHHHHHH-----HCCSSSSSEEEEEEECEEECTTS------HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHH
T ss_pred             HHHHHHHHHH-----HHhhccCCceeeeeeeeEEcCCC------CchhHHHHHHhcCCcceecccCceeecCcHHHHHHH
Confidence            5444444332     23456789999999999987631      111111111111   111      234557999999


Q ss_pred             HHHHhcCCCCCccccEEEeCCCcc
Q 024551          240 VAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       240 ~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +.+++...  ...| .+++.++..
T Consensus       202 ~~~~~~~~--~~~g-~yn~~~~~~  222 (298)
T 4b4o_A          202 LTHALEAN--HVHG-VLNGVAPSS  222 (298)
T ss_dssp             HHHHHHCT--TCCE-EEEESCSCC
T ss_pred             HHHHHhCC--CCCC-eEEEECCCc
Confidence            99998543  2455 667666543

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.26  E-value=2.7e-12  Score=104.08  Aligned_cols=152  Identities=16%  Similarity=0.162  Sum_probs=94.2

Q ss_pred             cCCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC
Q 024551           15 SLRGMTALVTGG----------------TRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF   78 (266)
Q Consensus        15 ~~~~k~vlItGa----------------s~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~   78 (266)
                      +++||++|||||                |++||+++|++|+++|++|++++++.. ++        ....+  -.+|+++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~~g~--~~~dv~~   73 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TPPFV--KRVDVMT   73 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CCTTE--EEEECCS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cCCCC--eEEccCc
Confidence            579999999999                689999999999999999999887652 11        01112  2467777


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHH---HhccchhhHHHHHHHHHHHHHhc-CCCeEEEEe
Q 024551           79 GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS---VMSTNVESSYHLCQLAHPLLKAS-GNASIVFMS  154 (266)
Q Consensus        79 ~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~---~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vs  154 (266)
                      .++   +++.+.+.+ +++|++|||||+....+. ....+++.+   . +.++.-.+..+.-+++.+.+. ..+.++ |+
T Consensus        74 ~~~---~~~~v~~~~-~~~Dili~~Aav~d~~p~-~~~~~KIkk~~~~-~~~l~l~L~~~pdIL~~l~~~~~~~~~~-VG  146 (226)
T 1u7z_A           74 ALE---MEAAVNASV-QQQNIFIGCAAVADYRAA-TVAPEKIKKQATQ-GDELTIKMVKNPDIVAGVAALKDHRPYV-VG  146 (226)
T ss_dssp             HHH---HHHHHHHHG-GGCSEEEECCBCCSEEES-SCCSSCC--------CEEEEEEEECCCHHHHHHHCSSSCCEE-EE
T ss_pred             HHH---HHHHHHHhc-CCCCEEEECCcccCCCCc-cCChHHhcccccc-CCceEEEEeecHHHHHHHHhhhcCCcEE-EE
Confidence            544   566667777 789999999998754433 223333433   2 223444444444455555553 233432 21


Q ss_pred             cCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCc
Q 024551          155 SVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA  200 (266)
Q Consensus       155 s~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~  200 (266)
                       ..         .+.      +.+.+....+|.++|+.+...+|--
T Consensus       147 -Fa---------aEt------~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          147 -FA---------AET------NNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             -EE---------EES------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             -cc---------hhh------chHHHHHHHHHHhcCCCEEEEeecc
Confidence             11         111      2366666777888888777666643

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.09  E-value=1.6e-10  Score=99.61  Aligned_cols=150  Identities=13%  Similarity=0.080  Sum_probs=101.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC-------eEEEecCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA-------SVHTCGRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++++||||+|.||.+++..|+++|+       .|+++++++  +..+....++.+....  ++ .|+.+.++..+.+   
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~--~~-~di~~~~~~~~a~---   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP--LL-AGLEATDDPKVAF---   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT--TE-EEEEEESCHHHHT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccc--cc-CCeEeccChHHHh---
Confidence            4799999999999999999999996       799999875  3333333344332111  22 4665544443333   


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC--------CC-
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG--------AI-  160 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~--------~~-  160 (266)
                           ...|++||.||.....   ..+   ..+.++.|+.++..+++++...=  ....+++++|+...        .. 
T Consensus        79 -----~~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           79 -----KDADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             -----TTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             -----CCCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcC
Confidence                 2489999999976421   122   34578999999999988775321  12458888887541        11 


Q ss_pred             CCCCchhhhhhHHHHHHHHHHHHHHhc
Q 024551          161 SIPRLSAYAASKGAINQLTKNLACEWA  187 (266)
Q Consensus       161 ~~~~~~~y~~sK~al~~~~~~~a~el~  187 (266)
                      +.++...|+.+|...+.+.+.++..++
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             CCChhheeccchHHHHHHHHHHHHHhC
Confidence            244556799999999999988887654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.97  E-value=3.2e-10  Score=92.12  Aligned_cols=92  Identities=20%  Similarity=0.219  Sum_probs=64.8

Q ss_pred             CCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHH
Q 024551           17 RGMTALVTGG----------------TRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD   80 (266)
Q Consensus        17 ~~k~vlItGa----------------s~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~   80 (266)
                      +||++|||||                ||++|.++|++|+++|++|++++|+.....       .....+..  .|+.   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~~~~~~--~~v~---   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPHPNLSI--REIT---   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCCTTEEE--EECC---
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCCCCeEE--EEHh---
Confidence            5899999999                777999999999999999999998753110       00112322  3443   


Q ss_pred             HHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHH
Q 024551           81 QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS  121 (266)
Q Consensus        81 ~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~  121 (266)
                      +++++++.+.+.+ +++|++|+||++....+....+.+++.
T Consensus        70 s~~em~~~v~~~~-~~~Dili~aAAvsD~~p~~~~~~e~~~  109 (232)
T 2gk4_A           70 NTKDLLIEMQERV-QDYQVLIHSMAVSDYTPVYMTGLEEVQ  109 (232)
T ss_dssp             SHHHHHHHHHHHG-GGCSEEEECSBCCSEEEEEEEEHHHHH
T ss_pred             HHHHHHHHHHHhc-CCCCEEEEcCccccccchhhcchhhhh
Confidence            5666777777777 789999999998765554433444433

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.95  E-value=1.1e-09  Score=84.30  Aligned_cols=78  Identities=14%  Similarity=0.029  Sum_probs=66.0

Q ss_pred             CchHHHHHHHHHHCCCeEEEecCChhHHH---HHHHHHHhcCCeeEEEeccCCCH--HHHHHHHHHHHhhcCCcccEEEe
Q 024551           28 RGIGYAIVEELARFGASVHTCGRDQNMIN---ERIQEWESKGFKVTGSVCDLSFG--DQREKLIETVSSVFDGKLNILVN  102 (266)
Q Consensus        28 ~giG~aia~~la~~G~~v~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~D~~~~--~~i~~~~~~~~~~~~~~id~lv~  102 (266)
                      +-++.++++.|+++|++|++..|+.+..+   +..+.+.+.|.++..+++|++++  ++++++++.+.+.+ |+ |+|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEEE
Confidence            35789999999999999999988765432   24556667788999999999999  99999999999988 67 99999


Q ss_pred             ccccc
Q 024551          103 NAALV  107 (266)
Q Consensus       103 ~ag~~  107 (266)
                      |+|+.
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99975

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.91  E-value=3e-12  Score=114.46  Aligned_cols=165  Identities=13%  Similarity=0.018  Sum_probs=89.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHH------hcCCeeEEEeccCCCHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE------SKGFKVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~------~~~~~~~~~~~D~~~~~~i~~~~~   87 (266)
                      +.+.||+++|||++ +||+++|+.|+..|++|+++++++...++......      +.-..+.++........-+.   .
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~---~  336 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIM---L  336 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBC---H
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhh---H
Confidence            35899999999997 99999999999999999999999877665443210      00001111110000011010   1


Q ss_pred             HHHhhcCCcccEEEeccccccccCCCCCCHHHHHHH-------hccchhhHHHHH-HHHHHHHHhcCCCeEEEEecCCCC
Q 024551           88 TVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV-------MSTNVESSYHLC-QLAHPLLKASGNASIVFMSSVAGA  159 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~-------~~~n~~~~~~l~-~~~~~~m~~~~~g~iv~vss~~~~  159 (266)
                      +..+..  +.+.+|+|+|..    ..+.+.+.++..       +..|+.+.+... +..++.|.   .|+|||++|..+.
T Consensus       337 e~l~~m--k~gaiVvNaG~~----~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLa---eGRIVNlsS~~G~  407 (488)
T 3ond_A          337 DHMKKM--KNNAIVCNIGHF----DNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILA---EGRLMNLGCATGH  407 (488)
T ss_dssp             HHHTTS--CTTEEEEESSST----TTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEG---GGSCHHHHHSCCS
T ss_pred             HHHHhc--CCCeEEEEcCCC----CcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHc---CCcEEEEecCccc
Confidence            112222  356777777754    234566666654       233333322221 22233332   3899999998766


Q ss_pred             CCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCc
Q 024551          160 ISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWA  200 (266)
Q Consensus       160 ~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~  200 (266)
                      .+......|+         .+.++.++.-++..++.+.||.
T Consensus       408 p~~vm~~sfa---------~Q~la~~~l~~~~~~~~~~~gv  439 (488)
T 3ond_A          408 PSFVMSCSFT---------NQVIAQLELWNEKSSGKYEKKV  439 (488)
T ss_dssp             CHHHHHHHHH---------HHHHHHHHHHHTTTTCCCCSSE
T ss_pred             CcccccccHH---------HHHHHHHHHHhCCCccccCCCc
Confidence            3322222232         3445544333333445566765

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.90  E-value=8e-09  Score=74.79  Aligned_cols=75  Identities=17%  Similarity=0.129  Sum_probs=62.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .+++++|+|+ |++|+++++.|.++| ++|++++|++++++.+.    .  ..+.++.+|+++.+++.++++        
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~~--------   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--MGVATKQVDAKDEAGLAKALG--------   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--TTCEEEECCTTCHHHHHHHTT--------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--CCCcEEEecCCCHHHHHHHHc--------
Confidence            3578999999 999999999999999 89999999998776554    2  346678899999887766553        


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|++++.
T Consensus        69 ~~d~vi~~~~~   79 (118)
T 3ic5_A           69 GFDAVISAAPF   79 (118)
T ss_dssp             TCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            58999999963

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.80  E-value=3.6e-08  Score=87.32  Aligned_cols=82  Identities=21%  Similarity=0.187  Sum_probs=71.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCC---CeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           19 MTALVTGGTRGIGYAIVEELARFG---ASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G---~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+|| |+||+++++.|+++|   ..|++++|+.++++++++++... +.++.++.+|++|.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            57899999 899999999999998   48999999999999999888654 246888999999999999988864     


Q ss_pred             CcccEEEeccccc
Q 024551           95 GKLNILVNNAALV  107 (266)
Q Consensus        95 ~~id~lv~~ag~~  107 (266)
                       ++|+||||+|..
T Consensus        76 -~~DvVin~ag~~   87 (405)
T 4ina_A           76 -KPQIVLNIALPY   87 (405)
T ss_dssp             -CCSEEEECSCGG
T ss_pred             -CCCEEEECCCcc
Confidence             489999999854

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.74  E-value=4e-09  Score=96.43  Aligned_cols=99  Identities=20%  Similarity=0.195  Sum_probs=69.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-   93 (266)
                      ++++|+++|||| +|+|++++.+|+++|++|++++|+.++++++++++   +..+.    ++.|   +        +.+ 
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~---~~~~~----~~~d---l--------~~~~  421 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI---GGKAL----SLTD---L--------DNYH  421 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT---TC-CE----ETTT---T--------TTC-
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCcee----eHHH---h--------hhcc
Confidence            578999999999 59999999999999999999999999888887766   22322    2222   1        111 


Q ss_pred             CCcccEEEecccccc-c----cCCCCCCHHHHHHHhccchhhHH
Q 024551           94 DGKLNILVNNAALVV-M----KRATEYTLEEYSSVMSTNVESSY  132 (266)
Q Consensus        94 ~~~id~lv~~ag~~~-~----~~~~~~~~~~~~~~~~~n~~~~~  132 (266)
                      ...+|++|||+|... +    .++.+.+.++|...+++|+.+..
T Consensus       422 ~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             -CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             ccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            135899999999742 1    34556677788899999998763

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.72  E-value=6.1e-09  Score=88.04  Aligned_cols=82  Identities=17%  Similarity=0.164  Sum_probs=61.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|+++|||++ |+|++++++|+++| +|++++|+.++++++++++...+.....+.+|+.+.          .+.+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~  191 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL  191 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh
Confidence            35789999999997 99999999999999 999999999999888887754211000123344441          3344


Q ss_pred             CCcccEEEecccccc
Q 024551           94 DGKLNILVNNAALVV  108 (266)
Q Consensus        94 ~~~id~lv~~ag~~~  108 (266)
                       +++|++|||+|...
T Consensus       192 -~~~DilVn~ag~~~  205 (287)
T 1nvt_A          192 -DGVDIIINATPIGM  205 (287)
T ss_dssp             -TTCCEEEECSCTTC
T ss_pred             -CCCCEEEECCCCCC
Confidence             67999999999754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.69  E-value=5.3e-08  Score=77.42  Aligned_cols=103  Identities=18%  Similarity=0.200  Sum_probs=71.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||++|||.++++.+...|++|++++|++++.+..    .+.+...   .+|.++.+..+.+.+...   ++.
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~~---~~~  107 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEY---VGDSRSVDFADEILELTD---GYG  107 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSE---EEETTCSTHHHHHHHHTT---TCC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE---EeeCCcHHHHHHHHHHhC---CCC
Confidence            589999999999999999999999999999999998766543    2234322   247776654444433221   136


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                      +|++|+|+|..                          ..+.+++.|+.  .|++|.+++..
T Consensus       108 ~D~vi~~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~  140 (198)
T 1pqw_A          108 VDVVLNSLAGE--------------------------AIQRGVQILAP--GGRFIELGKKD  140 (198)
T ss_dssp             EEEEEECCCTH--------------------------HHHHHHHTEEE--EEEEEECSCGG
T ss_pred             CeEEEECCchH--------------------------HHHHHHHHhcc--CCEEEEEcCCC
Confidence            99999999721                          02344555544  47999998754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.65  E-value=6.2e-08  Score=84.75  Aligned_cols=108  Identities=14%  Similarity=0.130  Sum_probs=75.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ..+++++++|+|+ |+||+++++.+...|++|++++|++++++...+.+   +..   +.+|.++.+++.+.+.      
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~------  228 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ------  228 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH------
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh------
Confidence            4588999999999 99999999999999999999999998876654433   333   3467777777666543      


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                        ..|++|+++|......                   +..+.+.+++.|++  .++||++++..
T Consensus       229 --~~DvVi~~~g~~~~~~-------------------~~li~~~~l~~mk~--gg~iV~v~~~~  269 (369)
T 2eez_A          229 --HADLLIGAVLVPGAKA-------------------PKLVTRDMLSLMKE--GAVIVDVAVDQ  269 (369)
T ss_dssp             --HCSEEEECCC--------------------------CCSCHHHHTTSCT--TCEEEECC---
T ss_pred             --CCCEEEECCCCCcccc-------------------chhHHHHHHHhhcC--CCEEEEEecCC
Confidence              4799999999642100                   12234556666743  57999998754

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.63  E-value=8.2e-08  Score=83.18  Aligned_cols=104  Identities=15%  Similarity=0.157  Sum_probs=74.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|++++||.++++.+...|++|++++|++++++.. ++   .+...   ..|.++.+++.+.+.++.+   +.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~---~g~~~---~~d~~~~~~~~~~~~~~~~---~~  238 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RS---IGGEV---FIDFTKEKDIVGAVLKATD---GG  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HH---TTCCE---EEETTTCSCHHHHHHHHHT---SC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HH---cCCce---EEecCccHhHHHHHHHHhC---CC
Confidence            589999999999999999999999999999999988876433 22   33332   2477765566666655543   36


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                      +|++|+++|..          +               ..+.+++.|++  .|++|.+++..
T Consensus       239 ~D~vi~~~g~~----------~---------------~~~~~~~~l~~--~G~iv~~g~~~  272 (347)
T 2hcy_A          239 AHGVINVSVSE----------A---------------AIEASTRYVRA--NGTTVLVGMPA  272 (347)
T ss_dssp             EEEEEECSSCH----------H---------------HHHHHTTSEEE--EEEEEECCCCT
T ss_pred             CCEEEECCCcH----------H---------------HHHHHHHHHhc--CCEEEEEeCCC
Confidence            99999999841          1               23444555544  47999988754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.62  E-value=3.2e-07  Score=78.15  Aligned_cols=84  Identities=19%  Similarity=0.200  Sum_probs=65.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCC---hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRD---QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .+++||+++|+|+ +|+|++++.+|++.|+ +|++++|+   .++.+++++++....+ +.+...++.+.+++.+.+.  
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhc--
Confidence            5689999999998 6999999999999998 79999999   8899999888876432 2333456666655544332  


Q ss_pred             HhhcCCcccEEEeccccc
Q 024551           90 SSVFDGKLNILVNNAALV  107 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~  107 (266)
                            ..|+|||+.+..
T Consensus       226 ------~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ------ESVIFTNATGVG  237 (315)
T ss_dssp             ------TCSEEEECSSTT
T ss_pred             ------CCCEEEECccCC
Confidence                  479999998643

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.62  E-value=7.2e-08  Score=86.42  Aligned_cols=78  Identities=12%  Similarity=0.077  Sum_probs=63.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++|+++|+| +|++|++++++|++.|++|++++|+.++.+++.+.+    ..+..+++|++|.+++.++++        .
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~--------~   68 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA--------K   68 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT--------T
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc--------C
Confidence            478999998 799999999999999999999999988766554432    236778899999988776653        4


Q ss_pred             ccEEEeccccc
Q 024551           97 LNILVNNAALV  107 (266)
Q Consensus        97 id~lv~~ag~~  107 (266)
                      +|+|||+++..
T Consensus        69 ~DvVIn~a~~~   79 (450)
T 1ff9_A           69 HDLVISLIPYT   79 (450)
T ss_dssp             SSEEEECCC--
T ss_pred             CcEEEECCccc
Confidence            89999999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.59  E-value=9.8e-08  Score=82.14  Aligned_cols=79  Identities=16%  Similarity=0.222  Sum_probs=60.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++||||++|||.++++.+...|++|+++++++++++.. +++   +...   .+|.++.+++.+.+.++..   +.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~~---~~d~~~~~~~~~~~~~~~~---~~  214 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFDA---AFNYKTVNSLEEALKKASP---DG  214 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTSCSCHHHHHHHHCT---TC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCcE---EEecCCHHHHHHHHHHHhC---CC
Confidence            589999999999999999999999999999999998877655 333   3322   2477764455555554432   46


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|++|+|+|
T Consensus       215 ~d~vi~~~g  223 (333)
T 1v3u_A          215 YDCYFDNVG  223 (333)
T ss_dssp             EEEEEESSC
T ss_pred             CeEEEECCC
Confidence            999999999

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.49  E-value=3.4e-07  Score=82.34  Aligned_cols=80  Identities=11%  Similarity=0.111  Sum_probs=63.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++|+++|+|+ |++|++++..|+++ |++|++++|+.++++++++.     ..+.++.+|++|.+++.+++.     
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~-----   87 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA-----   87 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH-----
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc-----
Confidence            4577899999998 99999999999998 78999999999887766553     135567899999988776654     


Q ss_pred             cCCcccEEEeccccc
Q 024551           93 FDGKLNILVNNAALV  107 (266)
Q Consensus        93 ~~~~id~lv~~ag~~  107 (266)
                         .+|+|||+++..
T Consensus        88 ---~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ---DNDVVISLIPYT   99 (467)
T ss_dssp             ---TSSEEEECSCGG
T ss_pred             ---CCCEEEECCchh
Confidence               489999999864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.47  E-value=5.3e-07  Score=75.43  Aligned_cols=79  Identities=14%  Similarity=0.295  Sum_probs=60.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++++++...+ .+.  ..|+   +++       .+  
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~--  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG--  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT--
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc--
Confidence            3578999999998 699999999999999999999999999888888775432 222  2332   211       11  


Q ss_pred             CCcccEEEeccccccc
Q 024551           94 DGKLNILVNNAALVVM  109 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~  109 (266)
                       +..|++|+++|....
T Consensus       179 -~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          179 -HEFDLIINATSSGIS  193 (271)
T ss_dssp             -CCCSEEEECCSCGGG
T ss_pred             -CCCCEEEECCCCCCC
Confidence             369999999997543

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.44  E-value=7.2e-07  Score=79.87  Aligned_cols=110  Identities=15%  Similarity=0.190  Sum_probs=76.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEec--cCC---------CHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC--DLS---------FGDQREKL   85 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~--D~~---------~~~~i~~~   85 (266)
                      .|++|+|+||+++||.+++..+...|++|+++++++++++.+ +   +.|....+-..  |+.         +.++++.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~---~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-R---ALGCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---hcCCCEEEecccccccccccccccccchhhhHH
Confidence            689999999999999999999999999999999988877644 2   33433322221  221         23455666


Q ss_pred             HHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC
Q 024551           86 IETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG  158 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~  158 (266)
                      .+++.+..++.+|++|+++|..           .+               +.+++.++.  .|++|.+++..+
T Consensus       296 ~~~v~~~~g~g~Dvvid~~G~~-----------~~---------------~~~~~~l~~--~G~iv~~G~~~~  340 (447)
T 4a0s_A          296 AKLVVEKAGREPDIVFEHTGRV-----------TF---------------GLSVIVARR--GGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHSSCCSEEEECSCHH-----------HH---------------HHHHHHSCT--TCEEEESCCTTC
T ss_pred             HHHHHHHhCCCceEEEECCCch-----------HH---------------HHHHHHHhc--CCEEEEEecCCC
Confidence            7777776645699999999941           01               334444443  589999987643

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.41  E-value=9.9e-07  Score=75.84  Aligned_cols=80  Identities=16%  Similarity=0.192  Sum_probs=59.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||++|||.++++.+...|++|++++|++++++...+ +   +...   ..|.++.+..+++.+.. .  +..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g~~~---~~d~~~~~~~~~i~~~~-~--~~~  214 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---GCHH---TINYSTQDFAEVVREIT-G--GKG  214 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHH-T--TCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCHHHHHHHHHHh-C--CCC
Confidence            58999999999999999999999999999999999877765533 3   3332   24666655444443332 1  136


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|+|+|.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1wly_A          215 VDVVYDSIGK  224 (333)
T ss_dssp             EEEEEECSCT
T ss_pred             CeEEEECCcH
Confidence            9999999994

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.40  E-value=7.5e-07  Score=76.36  Aligned_cols=104  Identities=15%  Similarity=0.149  Sum_probs=72.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||++|||.++++.+...|++|++++|++++++...+ +   +...   .+|.++.+..+++.+...   +..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~~---~~~  209 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEITG---GKK  209 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHTT---TCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHhC---CCC
Confidence            58999999999999999999999999999999999887665543 3   3332   246666554444433221   136


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG  158 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~  158 (266)
                      +|++|+|+|. .       .                  .+.+++.++.  .|+++.+++..+
T Consensus       210 ~D~vi~~~g~-~-------~------------------~~~~~~~l~~--~G~iv~~g~~~~  243 (327)
T 1qor_A          210 VRVVYDSVGR-D-------T------------------WERSLDCLQR--RGLMVSFGNSSG  243 (327)
T ss_dssp             EEEEEECSCG-G-------G------------------HHHHHHTEEE--EEEEEECCCTTC
T ss_pred             ceEEEECCch-H-------H------------------HHHHHHHhcC--CCEEEEEecCCC
Confidence            9999999992 1       0                  2334455544  579999987543

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.40  E-value=1.5e-06  Score=72.97  Aligned_cols=82  Identities=15%  Similarity=0.088  Sum_probs=61.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++|+++|+|+ ||+|++++.+|++.|+ +|++++|+.++.+++++++......+.+...+..+.   .+.+.     
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~-----  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIA-----  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHH-----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHh-----
Confidence            3678999999998 7999999999999998 699999999999999998876433333333444332   22222     


Q ss_pred             cCCcccEEEeccccc
Q 024551           93 FDGKLNILVNNAALV  107 (266)
Q Consensus        93 ~~~~id~lv~~ag~~  107 (266)
                         ..|++||+.+..
T Consensus       194 ---~~DiVInaTp~G  205 (283)
T 3jyo_A          194 ---AADGVVNATPMG  205 (283)
T ss_dssp             ---HSSEEEECSSTT
T ss_pred             ---cCCEEEECCCCC
Confidence               469999998743

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.36  E-value=2.2e-06  Score=64.08  Aligned_cols=75  Identities=15%  Similarity=0.186  Sum_probs=59.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +.+.++|+|+ |.+|+++++.|.++|++|++++++++..+.+.+    .  .+.++..|.++++.++++      .. ..
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~------~~-~~   70 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--GFDAVIADPTDESFYRSL------DL-EG   70 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEECCTTCHHHHHHS------CC-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--CCcEEECCCCCHHHHHhC------Cc-cc
Confidence            4578999998 679999999999999999999999987665543    2  356778999999876653      11 46


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      .|++|.+.+
T Consensus        71 ~d~vi~~~~   79 (141)
T 3llv_A           71 VSAVLITGS   79 (141)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEecC
Confidence            899998777

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.34  E-value=1.3e-06  Score=75.74  Aligned_cols=80  Identities=16%  Similarity=0.193  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||++|||.++++.+...|++|++++|++++++.. +++   +...   .+|.++.+..+++.+.. .  +..
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~~~-~--~~~  231 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSEATLKFT-K--GAG  231 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHHHHHHHT-T--TSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHHHHHHHh-c--CCC
Confidence            589999999999999999999999999999999998877655 333   3332   24666554433333221 1  136


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|+|+|.
T Consensus       232 ~d~vi~~~G~  241 (354)
T 2j8z_A          232 VNLILDCIGG  241 (354)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCc
Confidence            9999999994

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.33  E-value=8.4e-07  Score=76.62  Aligned_cols=81  Identities=12%  Similarity=0.179  Sum_probs=60.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||+++||.++++.+...|++|+++++++++++.+.+++   +...   ..|.++.+++.+.+.++.   ++.
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~---~~~  225 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRCF---PNG  225 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHHC---TTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHHh---CCC
Confidence            5899999999999999999999999999999999988776554332   4332   236665444444444443   246


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|+|+|.
T Consensus       226 ~d~vi~~~g~  235 (345)
T 2j3h_A          226 IDIYFENVGG  235 (345)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCH
Confidence            9999999983

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.33  E-value=2.1e-06  Score=74.45  Aligned_cols=80  Identities=18%  Similarity=0.234  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||++|||.++++.+...|++|++++|++++++.. +   +.+...   .+|.++.+..+++.+.. .  +..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~---~~ga~~---~~d~~~~~~~~~~~~~~-~--~~~  239 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-L---QNGAHE---VFNHREVNYIDKIKKYV-G--EKG  239 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCSE---EEETTSTTHHHHHHHHH-C--TTC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-H---HcCCCE---EEeCCCchHHHHHHHHc-C--CCC
Confidence            589999999999999999999999999999999998877632 2   233332   24666654443333222 1  136


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|+|+|.
T Consensus       240 ~D~vi~~~G~  249 (351)
T 1yb5_A          240 IDIIIEMLAN  249 (351)
T ss_dssp             EEEEEESCHH
T ss_pred             cEEEEECCCh
Confidence            9999999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.33  E-value=8.4e-07  Score=66.21  Aligned_cols=77  Identities=17%  Similarity=0.216  Sum_probs=57.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +++++++|+|+ |.+|+.+++.|.+.|++|++++|+++..+.+    .+.+  ..++..|.++++.++++      .. .
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~~--~~~~~~d~~~~~~l~~~------~~-~   69 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA--THAVIANATEENELLSL------GI-R   69 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTTC--SEEEECCTTCHHHHHTT------TG-G
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhC--CEEEEeCCCCHHHHHhc------CC-C
Confidence            56788999998 9999999999999999999999988765432    2222  34677899887655432      12 4


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      ..|++|++++.
T Consensus        70 ~~d~vi~~~~~   80 (144)
T 2hmt_A           70 NFEYVIVAIGA   80 (144)
T ss_dssp             GCSEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            68999999884

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.31  E-value=1.1e-06  Score=76.32  Aligned_cols=79  Identities=15%  Similarity=0.170  Sum_probs=57.5

Q ss_pred             CC--CEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RG--MTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~--k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .|  ++++|+||++|||.++++.+...|+ +|+++++++++++.+.+++   +...   .+|.++.+..+.    +.+..
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~----~~~~~  227 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFDA---AINYKKDNVAEQ----LRESC  227 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCSE---EEETTTSCHHHH----HHHHC
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCce---EEecCchHHHHH----HHHhc
Confidence            47  9999999999999999999999999 9999999988776554433   3322   246665433222    22222


Q ss_pred             CCcccEEEeccc
Q 024551           94 DGKLNILVNNAA  105 (266)
Q Consensus        94 ~~~id~lv~~ag  105 (266)
                      .+.+|++|+|+|
T Consensus       228 ~~~~d~vi~~~G  239 (357)
T 2zb4_A          228 PAGVDVYFDNVG  239 (357)
T ss_dssp             TTCEEEEEESCC
T ss_pred             CCCCCEEEECCC
Confidence            236999999999

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.31  E-value=1.7e-06  Score=74.40  Aligned_cols=80  Identities=16%  Similarity=0.181  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|++++||.+++..+...|++|+++++++++++.+.+++   +...   ..|.++.+..+.+.    +..++.
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~----~~~~~~  218 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDG---AIDYKNEDLAAGLK----RECPKG  218 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSE---EEETTTSCHHHHHH----HHCTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCE---EEECCCHHHHHHHH----HhcCCC
Confidence            5899999999999999999999999999999999998776554433   3322   23555544333322    222357


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|+|+|.
T Consensus       219 ~d~vi~~~g~  228 (336)
T 4b7c_A          219 IDVFFDNVGG  228 (336)
T ss_dssp             EEEEEESSCH
T ss_pred             ceEEEECCCc
Confidence            9999999984

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.29  E-value=6e-06  Score=70.24  Aligned_cols=83  Identities=22%  Similarity=0.236  Sum_probs=61.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCC---hhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRD---QNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~---~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      .++++|+++|+|+ ||.|++++.+|++.|+ +|.++.|+   .++.+++++++... +..+.  ..+..+.+...+.+  
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~~l--  218 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVT--VTDLADQHAFTEAL--  218 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHH--
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceE--EechHhhhhhHhhc--
Confidence            5678999999998 8999999999999998 79999999   88888888888654 22333  34555543222221  


Q ss_pred             HHhhcCCcccEEEeccccc
Q 024551           89 VSSVFDGKLNILVNNAALV  107 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~  107 (266)
                            ...|++||+.+..
T Consensus       219 ------~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 ------ASADILTNGTKVG  231 (312)
T ss_dssp             ------HHCSEEEECSSTT
T ss_pred             ------cCceEEEECCcCC
Confidence                  2479999997753

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.27  E-value=4.3e-06  Score=72.14  Aligned_cols=104  Identities=14%  Similarity=0.201  Sum_probs=71.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+++++|.+++..+...|++|+.+++++++++... ++   +...   .+|.++.+- .+.+.+..+  +..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~~-~~~~~~~~~--~~~  235 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPDW-PKEVRRLTG--GKG  235 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTTH-HHHHHHHTT--TTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCcccH-HHHHHHHhC--CCC
Confidence            5899999999999999999999999999999999988776553 23   3322   246665432 222222221  136


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG  158 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~  158 (266)
                      +|++|+++| ..       .                  .+.+++.++.  .|+++.+++...
T Consensus       236 ~d~vi~~~g-~~-------~------------------~~~~~~~l~~--~G~~v~~g~~~~  269 (343)
T 2eih_A          236 ADKVVDHTG-AL-------Y------------------FEGVIKATAN--GGRIAIAGASSG  269 (343)
T ss_dssp             EEEEEESSC-SS-------S------------------HHHHHHHEEE--EEEEEESSCCCS
T ss_pred             ceEEEECCC-HH-------H------------------HHHHHHhhcc--CCEEEEEecCCC
Confidence            999999999 21       1                  2334555544  479999887653

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.25  E-value=4.2e-06  Score=71.91  Aligned_cols=102  Identities=14%  Similarity=0.152  Sum_probs=69.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-DG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~   95 (266)
                      .|++++|+||++++|.+++..+...|++|+.+++++++++.. ++   .+....   .|.++.+..+.+    .+.. +.
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~~---~~~~~~~~~~~~----~~~~~~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KE---YGAEYL---INASKEDILRQV----LKFTNGK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSEE---EETTTSCHHHHH----HHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCcEE---EeCCCchHHHHH----HHHhCCC
Confidence            689999999999999999999999999999999998877633 32   343322   344443333322    2222 23


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                      .+|++|+|+|..                          ..+.+++.++.  .|++|.++...
T Consensus       217 g~D~vid~~g~~--------------------------~~~~~~~~l~~--~G~iv~~G~~~  250 (334)
T 3qwb_A          217 GVDASFDSVGKD--------------------------TFEISLAALKR--KGVFVSFGNAS  250 (334)
T ss_dssp             CEEEEEECCGGG--------------------------GHHHHHHHEEE--EEEEEECCCTT
T ss_pred             CceEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCCC
Confidence            699999999941                          12234455544  57999987654

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.24  E-value=5.1e-06  Score=71.38  Aligned_cols=150  Identities=13%  Similarity=0.107  Sum_probs=96.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC-------eEEEecCC----hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA-------SVHTCGRD----QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~-------~v~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   87 (266)
                      ++++||||+|.+|.+++..|+.+|.       .|++++++    +++++..+.++.+....+.   .|+....+....+ 
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al-   81 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF-   81 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh-
Confidence            5799999999999999999999885       79999998    6656655556655311111   2443333333322 


Q ss_pred             HHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC--------C
Q 024551           88 TVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG--------A  159 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~--------~  159 (266)
                             ...|++|+.||.....   ..+.+   +.+..|+.....+++.+.++-  ...++||++|....        .
T Consensus        82 -------~~aD~Vi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~  146 (329)
T 1b8p_A           82 -------KDADVALLVGARPRGP---GMERK---DLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKS  146 (329)
T ss_dssp             -------TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHT
T ss_pred             -------CCCCEEEEeCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHH
Confidence                   3479999999965321   12333   457788877777766664321  13568999987542        2


Q ss_pred             C-CCCCchhhhhhHHHHHHHHHHHHHHhc
Q 024551          160 I-SIPRLSAYAASKGAINQLTKNLACEWA  187 (266)
Q Consensus       160 ~-~~~~~~~y~~sK~al~~~~~~~a~el~  187 (266)
                      . ++|....|+.++.--..+-+.++..++
T Consensus       147 ~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          147 APSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             CTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             cCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            2 445555688877666667777777765

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.22  E-value=1.1e-05  Score=67.35  Aligned_cols=78  Identities=13%  Similarity=0.262  Sum_probs=58.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++...+ .+..  .|+   +++.       +  
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~-------~--  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSIP-------L--  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCC-------C--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHhc-------c--
Confidence            3578999999998 799999999999999999999999999999888875432 2222  232   1110       1  


Q ss_pred             CCcccEEEecccccc
Q 024551           94 DGKLNILVNNAALVV  108 (266)
Q Consensus        94 ~~~id~lv~~ag~~~  108 (266)
                       +..|++|++++...
T Consensus       179 -~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 -QTYDLVINATSAGL  192 (272)
T ss_dssp             -SCCSEEEECCCC--
T ss_pred             -CCCCEEEECCCCCC
Confidence             36899999999653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.14  E-value=5.4e-06  Score=72.20  Aligned_cols=100  Identities=20%  Similarity=0.208  Sum_probs=67.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh---hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ---NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .++|++|+|+|+ +++|..++..+...|++|+++++++   ++++ .++++   +..  .+  | ++  ++.+.+.+ ..
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~~~~---ga~--~v--~-~~--~~~~~~~~-~~  244 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-VIEET---KTN--YY--N-SS--NGYDKLKD-SV  244 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-HHHHH---TCE--EE--E-CT--TCSHHHHH-HH
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-HHHHh---CCc--ee--c-hH--HHHHHHHH-hC
Confidence            355999999999 9999999999999999999999987   6653 33333   322  22  5 44  22222222 11


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHH-HHHHHHHHhcCCCeEEEEecCC
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC-QLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~-~~~~~~m~~~~~g~iv~vss~~  157 (266)
                         +.+|++|+++|...                         .+ +.+++.|+.  .|++|+++...
T Consensus       245 ---~~~d~vid~~g~~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~  281 (366)
T 2cdc_A          245 ---GKFDVIIDATGADV-------------------------NILGNVIPLLGR--NGVLGLFGFST  281 (366)
T ss_dssp             ---CCEEEEEECCCCCT-------------------------HHHHHHGGGEEE--EEEEEECSCCC
T ss_pred             ---CCCCEEEECCCChH-------------------------HHHHHHHHHHhc--CCEEEEEecCC
Confidence               46999999999531                         12 445555544  47999987654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.12  E-value=1e-05  Score=69.86  Aligned_cols=80  Identities=15%  Similarity=0.212  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|+|++++||.+++..+... |++|+++++++++++... ++   +....   .|.++.+..+++ .++.+.  +
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~---g~~~~---~~~~~~~~~~~~-~~~~~~--~  239 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---GADYV---INASMQDPLAEI-RRITES--K  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHHH-HHHTTT--S
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCCEE---ecCCCccHHHHH-HHHhcC--C
Confidence            6899999999999999999999999 999999999988776543 33   33322   355554333322 222211  4


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|+++|.
T Consensus       240 ~~d~vi~~~g~  250 (347)
T 1jvb_A          240 GVDAVIDLNNS  250 (347)
T ss_dssp             CEEEEEESCCC
T ss_pred             CceEEEECCCC
Confidence            79999999995

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.06  E-value=1.8e-05  Score=68.55  Aligned_cols=79  Identities=20%  Similarity=0.284  Sum_probs=58.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||+++||.+++..+...|++|+++++++++++...+ +   +....   .|.++.+..+.+.+..    ++.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~~---~~~~~~~~~~~~~~~~----~~g  235 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---GAKRG---INYRSEDFAAVIKAET----GQG  235 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHHHH----SSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEE---EeCCchHHHHHHHHHh----CCC
Confidence            58999999999999999999999999999999999988765443 3   33322   3555544333333322    257


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|+|+|.
T Consensus       236 ~Dvvid~~g~  245 (353)
T 4dup_A          236 VDIILDMIGA  245 (353)
T ss_dssp             EEEEEESCCG
T ss_pred             ceEEEECCCH
Confidence            9999999994

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.04  E-value=2.4e-05  Score=57.85  Aligned_cols=75  Identities=15%  Similarity=0.195  Sum_probs=56.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.+.   .  .+.++..|.++++.+.+.      .. ...
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~--~~~~~~~d~~~~~~l~~~------~~-~~~   70 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I--DALVINGDCTKIKTLEDA------GI-EDA   70 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C--SSEEEESCTTSHHHHHHT------TT-TTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c--CcEEEEcCCCCHHHHHHc------Cc-ccC
Confidence            467899987 9999999999999999999999998876554432   1  344667888887664321      12 468


Q ss_pred             cEEEeccc
Q 024551           98 NILVNNAA  105 (266)
Q Consensus        98 d~lv~~ag  105 (266)
                      |++|.+.+
T Consensus        71 d~vi~~~~   78 (140)
T 1lss_A           71 DMYIAVTG   78 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEeeC
Confidence            99999975

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.03  E-value=9.9e-06  Score=68.55  Aligned_cols=79  Identities=16%  Similarity=0.186  Sum_probs=58.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++......  .     .+.++       +.+.
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~--~-----~~~~~-------~~~~  201 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSA--Y-----FSLAE-------AETR  201 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCC--E-----ECHHH-------HHHT
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCc--e-----eeHHH-------HHhh
Confidence            3578999999998 7899999999999998 8999999999988887765321111  1     11222       2222


Q ss_pred             cCCcccEEEecccccc
Q 024551           93 FDGKLNILVNNAALVV  108 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~  108 (266)
                      . ...|++|++.+...
T Consensus       202 ~-~~aDivIn~t~~~~  216 (297)
T 2egg_A          202 L-AEYDIIINTTSVGM  216 (297)
T ss_dssp             G-GGCSEEEECSCTTC
T ss_pred             h-ccCCEEEECCCCCC
Confidence            3 46899999998653

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.02  E-value=4e-05  Score=66.16  Aligned_cols=79  Identities=13%  Similarity=0.053  Sum_probs=55.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +++++|+||++++|.+++..+...|++|+.+++++++++.+. ++   |....   .|.++.+-.+. +.+....  ..+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~-v~~~~~~--~g~  234 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAHV---LNEKAPDFEAT-LREVMKA--EQP  234 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSEE---EETTSTTHHHH-HHHHHHH--HCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EECCcHHHHHH-HHHHhcC--CCC
Confidence            489999999999999999999899999999999988876543 23   43322   24444332222 2222221  259


Q ss_pred             cEEEecccc
Q 024551           98 NILVNNAAL  106 (266)
Q Consensus        98 d~lv~~ag~  106 (266)
                      |++|+++|.
T Consensus       235 D~vid~~g~  243 (349)
T 3pi7_A          235 RIFLDAVTG  243 (349)
T ss_dssp             CEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.01  E-value=4e-05  Score=67.03  Aligned_cols=79  Identities=13%  Similarity=0.176  Sum_probs=59.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ..+.|++++|+|+ |+||+++++.+...|++|++++|++++++.+.+.+   +..+.   .+..+.+++.+.+.      
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~~---~~~~~~~~l~~~l~------  230 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRIH---TRYSSAYELEGAVK------  230 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSSE---EEECCHHHHHHHHH------
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCeeE---eccCCHHHHHHHHc------
Confidence            3588999999999 99999999999999999999999998876655433   32321   23344555444332      


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                        ..|++|++++..
T Consensus       231 --~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 --RADLVIGAVLVP  242 (377)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              479999998854

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.00  E-value=2e-05  Score=67.35  Aligned_cols=79  Identities=15%  Similarity=0.142  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-DG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~   95 (266)
                      .|++++|+||++++|.+++..+...|++|+.+++++++++... ++   +....   .|.++.+..+++    .+.. +.
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~~----~~~~~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWET---IDYSHEDVAKRV----LELTDGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHHH----HHHTTTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EeCCCccHHHHH----HHHhCCC
Confidence            5899999999999999999999999999999999988776443 33   33322   355544333332    2222 23


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|+|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            69999999995

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.99  E-value=4.1e-05  Score=64.14  Aligned_cols=76  Identities=17%  Similarity=0.236  Sum_probs=59.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++++++...+ .+.....  .   ++          
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~--~---~l----------  184 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAF--E---QL----------  184 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEG--G---GC----------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeH--H---Hh----------
Confidence            4678999999998 6999999999999996 89999999999999999886543 3333321  1   11          


Q ss_pred             cCCcccEEEeccccc
Q 024551           93 FDGKLNILVNNAALV  107 (266)
Q Consensus        93 ~~~~id~lv~~ag~~  107 (266)
                      . ...|++||+.+..
T Consensus       185 ~-~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 K-QSYDVIINSTSAS  198 (281)
T ss_dssp             C-SCEEEEEECSCCC
T ss_pred             c-CCCCEEEEcCcCC
Confidence            0 3589999998754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.98  E-value=5.6e-05  Score=64.98  Aligned_cols=101  Identities=17%  Similarity=0.150  Sum_probs=68.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+ +++|..++..+...|++|+.+++++++++...    +.+...   ..|.++.+ +.+.+.   +.. +.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~---~~d~~~~~-~~~~~~---~~~-~~  230 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----ELGADL---VVNPLKED-AAKFMK---EKV-GG  230 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTCSE---EECTTTSC-HHHHHH---HHH-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HCCCCE---EecCCCcc-HHHHHH---HHh-CC
Confidence            5899999999 88999999999999999999999988776443    234332   24666543 222222   222 46


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                      +|++|+++|...                         ..+.+++.+++  .|+++.+++..
T Consensus       231 ~d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~  264 (339)
T 1rjw_A          231 VHAAVVTAVSKP-------------------------AFQSAYNSIRR--GGACVLVGLPP  264 (339)
T ss_dssp             EEEEEESSCCHH-------------------------HHHHHHHHEEE--EEEEEECCCCS
T ss_pred             CCEEEECCCCHH-------------------------HHHHHHHHhhc--CCEEEEecccC
Confidence            999999998421                         23444555544  47999987654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.98  E-value=1.8e-05  Score=68.29  Aligned_cols=78  Identities=22%  Similarity=0.245  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC-
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG-   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~-   95 (266)
                      .|++++|+||+++||.+++..+...|++|+.+++++++++...+ +   +... ++  |..  ++..   +.+.+..++ 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~~-v~--~~~--~~~~---~~v~~~~~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V---GADI-VL--PLE--EGWA---KAVREATGGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSE-EE--ESS--TTHH---HHHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcE-Ee--cCc--hhHH---HHHHHHhCCC
Confidence            58999999999999999999999999999999999888754433 3   3332 22  333  2222   233333323 


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|+|+|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999994

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.98  E-value=1.6e-05  Score=68.44  Aligned_cols=80  Identities=15%  Similarity=0.138  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+++++|.+++..+...|++|+++++++++++.+.+ +   +....   .|.++.+..+.+.+ ...  +..
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~---~~~~~~~~~~~~~~-~~~--~~g  213 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYV---IDTSTAPLYETVME-LTN--GIG  213 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EETTTSCHHHHHHH-HTT--TSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEE---EeCCcccHHHHHHH-HhC--CCC
Confidence            58999999999999999999888899999999999887765443 3   33322   25444333222222 211  236


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|+|+|.
T Consensus       214 ~Dvvid~~g~  223 (340)
T 3gms_A          214 ADAAIDSIGG  223 (340)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999995

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.96  E-value=4.2e-05  Score=68.60  Aligned_cols=86  Identities=10%  Similarity=0.083  Sum_probs=64.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEe--cc--------CCCHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV--CD--------LSFGDQREKLI   86 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~--~D--------~~~~~~i~~~~   86 (266)
                      .|++|+|+|++|++|...+..+...|++|+++++++++++.+ +++   |....+-.  .|        ..+.++++++.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHHH
Confidence            589999999999999999998888999999999988876544 333   43322211  12        24567777777


Q ss_pred             HHHHhhcC-CcccEEEecccc
Q 024551           87 ETVSSVFD-GKLNILVNNAAL  106 (266)
Q Consensus        87 ~~~~~~~~-~~id~lv~~ag~  106 (266)
                      +++.+..+ ..+|++|.++|.
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHhCCCCCcEEEEcCCc
Confidence            88877653 379999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.95  E-value=0.00013  Score=62.57  Aligned_cols=116  Identities=14%  Similarity=0.137  Sum_probs=71.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCC--eeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           19 MTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGF--KVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++||||+|.+|..++..|+++|  ..|++++++++  +....++.+...  ++..    +.+..+..+.+        
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al--------   74 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL--------   74 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH--------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc--------
Confidence            579999999999999999999998  77999998776  333334443221  2221    12233333332        


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                      ...|++|+++|.......   +.+   +.+..|+.....+.+.+.+.   ...+.|+++|...
T Consensus        75 ~gaDvVi~~ag~~~~~g~---~r~---dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SNPv  128 (326)
T 1smk_A           75 TGMDLIIVPAGVPRKPGM---TRD---DLFKINAGIVKTLCEGIAKC---CPRAIVNLISNPV  128 (326)
T ss_dssp             TTCSEEEECCCCCCCSSC---CCS---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSSH
T ss_pred             CCCCEEEEcCCcCCCCCC---CHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCch
Confidence            248999999996532111   111   34777877777776666432   2234555544433

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.92  E-value=8.9e-05  Score=56.05  Aligned_cols=78  Identities=14%  Similarity=0.061  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC-hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ..+.++|.|+ |.+|+.+++.|.++|++|++++++ ++..+.+.+..   ...+.++..|.++++.++++-      . .
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a~------i-~   70 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAG------I-D   70 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHT------T-T
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHcC------h-h
Confidence            3567888886 999999999999999999999997 45554444433   224678889999988765431      1 3


Q ss_pred             cccEEEeccc
Q 024551           96 KLNILVNNAA  105 (266)
Q Consensus        96 ~id~lv~~ag  105 (266)
                      ..|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (153)
T 1id1_A           71 RCRAILALSD   80 (153)
T ss_dssp             TCSEEEECSS
T ss_pred             hCCEEEEecC
Confidence            5799998876

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.89  E-value=4.3e-05  Score=66.38  Aligned_cols=103  Identities=12%  Similarity=0.154  Sum_probs=69.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||++++|..++..+...|++|+.+++++++++...+    .+....   .|.++.+ +.+.+.   +..++.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~~---~~~~~~~-~~~~~~---~~~~~g  231 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCDRP---INYKTEP-VGTVLK---QEYPEG  231 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEE---EETTTSC-HHHHHH---HHCTTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCcEE---EecCChh-HHHHHH---HhcCCC
Confidence            58999999999999999999999999999999999877654432    343322   2444332 222232   222246


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG  158 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~  158 (266)
                      +|++|+++|..                          ..+.+++.++.  .|++|.+++..+
T Consensus       232 ~D~vid~~g~~--------------------------~~~~~~~~l~~--~G~iv~~g~~~~  265 (362)
T 2c0c_A          232 VDVVYESVGGA--------------------------MFDLAVDALAT--KGRLIVIGFISG  265 (362)
T ss_dssp             EEEEEECSCTH--------------------------HHHHHHHHEEE--EEEEEECCCGGG
T ss_pred             CCEEEECCCHH--------------------------HHHHHHHHHhc--CCEEEEEeCCCC
Confidence            99999999831                          12234555554  479999987653

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.89  E-value=0.00025  Score=61.45  Aligned_cols=83  Identities=14%  Similarity=0.076  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++|||+|+ |++|...+..+...|++ |+.+++++++++... ++   ...+..+..|-.+.+++.+.+.+...  +.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---~~~~~~~~~~~~~~~~~~~~v~~~t~--g~  251 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI---CPEVVTHKVERLSAEESAKKIVESFG--GI  251 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH---CTTCEEEECCSCCHHHHHHHHHHHTS--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---chhcccccccccchHHHHHHHHHHhC--CC
Confidence            5899999998 99999999888889998 889999988776444 33   23444445555555554444433322  24


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.++|.
T Consensus       252 g~Dvvid~~g~  262 (363)
T 3m6i_A          252 EPAVALECTGV  262 (363)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.87  E-value=3.8e-05  Score=66.81  Aligned_cols=77  Identities=18%  Similarity=0.158  Sum_probs=58.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +.-+.++|+|.|| |.+|+.+++.|++ .++|.+.+++.++++++.+       .+..+.+|++|.+++.++++      
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-------~~~~~~~d~~d~~~l~~~~~------   76 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-------FATPLKVDASNFDKLVEVMK------   76 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-------TSEEEECCTTCHHHHHHHHT------
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-------cCCcEEEecCCHHHHHHHHh------
Confidence            3334457999998 9999999999865 5789999999887765432       35567899999998877765      


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                        ..|+||++++..
T Consensus        77 --~~DvVi~~~p~~   88 (365)
T 3abi_A           77 --EFELVIGALPGF   88 (365)
T ss_dssp             --TCSEEEECCCGG
T ss_pred             --CCCEEEEecCCc
Confidence              479999998754

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.83  E-value=9.2e-05  Score=64.33  Aligned_cols=78  Identities=14%  Similarity=0.174  Sum_probs=57.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+++++++|+|+ |++|+++++.+...|++|++++|++++++.+.+....   .+..   +..+.+++.+.+        
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~~---~~~~~~~~~~~~--------  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAV--------  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHH--------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeEe---eeCCHHHHHHHH--------
Confidence            477899999999 9999999999999999999999999988777654422   2211   223344433322        


Q ss_pred             CcccEEEeccccc
Q 024551           95 GKLNILVNNAALV  107 (266)
Q Consensus        95 ~~id~lv~~ag~~  107 (266)
                      ...|++|++++..
T Consensus       229 ~~~DvVI~~~~~~  241 (361)
T 1pjc_A          229 AEADLLIGAVLVP  241 (361)
T ss_dssp             HTCSEEEECCCCT
T ss_pred             cCCCEEEECCCcC
Confidence            2489999999864

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.80  E-value=0.00014  Score=54.16  Aligned_cols=73  Identities=12%  Similarity=0.089  Sum_probs=56.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +.++|.|+ |.+|..+++.|.++|+.|++++++++..+.+.+    .  .+.++..|.++++.++++      .. ...|
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a------~i-~~ad   73 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLA------HL-ECAK   73 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHT------TG-GGCS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhc------Cc-ccCC
Confidence            46777887 779999999999999999999999987765443    2  455778999999876553      11 3579


Q ss_pred             EEEeccc
Q 024551           99 ILVNNAA  105 (266)
Q Consensus        99 ~lv~~ag  105 (266)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (140)
T 3fwz_A           74 WLILTIP   80 (140)
T ss_dssp             EEEECCS
T ss_pred             EEEEECC
Confidence            9988776

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.79  E-value=0.0002  Score=61.78  Aligned_cols=102  Identities=12%  Similarity=0.093  Sum_probs=68.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD-   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   94 (266)
                      .|++++|+|+ +++|..++..+...|+ +|+.+++++++++... ++   +... +  .|.++++ +.   +++.+..+ 
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~~-~--~~~~~~~-~~---~~v~~~~~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GADY-V--INPFEED-VV---KEVMDITDG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCSE-E--ECTTTSC-HH---HHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCE-E--ECCCCcC-HH---HHHHHHcCC
Confidence            7899999999 9999999999888999 8999999987765443 33   3322 1  3544432 22   22333221 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                      ..+|++|+++|..                         ...+.+++.++.  .|+++.+++..
T Consensus       235 ~g~D~vid~~g~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~  270 (348)
T 2d8a_A          235 NGVDVFLEFSGAP-------------------------KALEQGLQAVTP--AGRVSLLGLYP  270 (348)
T ss_dssp             SCEEEEEECSCCH-------------------------HHHHHHHHHEEE--EEEEEECCCCS
T ss_pred             CCCCEEEECCCCH-------------------------HHHHHHHHHHhc--CCEEEEEccCC
Confidence            3599999999841                         123445555554  57999998754

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.79  E-value=0.00024  Score=60.20  Aligned_cols=111  Identities=10%  Similarity=-0.037  Sum_probs=70.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecC--ChhHHHHHHHHHHhc---CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGR--DQNMINERIQEWESK---GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r--~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++||||+|.+|.+++..|+.+|.  .++++++  ++++++....++.+.   ..++.+.. +  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            689999999999999999999885  5888999  777665545555442   22232222 2  2111           


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                      + ...|++|+.+|.....   ..+.+   +.+..|+.....+.+.+    .+.. ++.|+++|.
T Consensus        68 ~-~~aDvVi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SN  120 (303)
T 1o6z_A           68 T-AGSDVVVITAGIPRQP---GQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTTSN  120 (303)
T ss_dssp             G-TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEECCS
T ss_pred             h-CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCC
Confidence            2 3589999999965321   11333   34777877777776655    4444 344554443

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.78  E-value=0.0001  Score=62.80  Aligned_cols=146  Identities=10%  Similarity=0.078  Sum_probs=86.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecC--ChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGR--DQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r--~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +++||||+|.+|..++..|+.+|.  .++++++  ++++++..+.++.+.    +..+.+...|    ++       +.+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~-------l~~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DE-------NLR   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TT-------CGG
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cc-------hHH
Confidence            689999999999999999999884  4888888  766555444444332    1122221111    01       111


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC--------CCCC
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA--------ISIP  163 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~--------~~~~  163 (266)
                      .+ ...|++|+.||.....   ..+.   .+.++.|+.....+.+.+.    +..+..|+++|.....        .++|
T Consensus        71 al-~gaD~Vi~~Ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~----~~~~~~vlv~SNPv~~~t~~~~k~~~~p  139 (313)
T 1hye_A           71 II-DESDVVIITSGVPRKE---GMSR---MDLAKTNAKIVGKYAKKIA----EICDTKIFVITNPVDVMTYKALVDSKFE  139 (313)
T ss_dssp             GG-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHH----HHCCCEEEECSSSHHHHHHHHHHHHCCC
T ss_pred             Hh-CCCCEEEECCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHH----HhCCeEEEEecCcHHHHHHHHHHhhCcC
Confidence            22 3589999999975321   1232   3458888888888877764    3333455555543321        1345


Q ss_pred             Cchhhhh-hHHHHHHHHHHHHHHhc
Q 024551          164 RLSAYAA-SKGAINQLTKNLACEWA  187 (266)
Q Consensus       164 ~~~~y~~-sK~al~~~~~~~a~el~  187 (266)
                      ....++. +..--..+-+.++..++
T Consensus       140 ~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          140 RNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             TTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             hhcEEEeCccHHHHHHHHHHHHHhC
Confidence            4455666 55445566666666655

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.78  E-value=6.6e-05  Score=62.58  Aligned_cols=76  Identities=17%  Similarity=0.158  Sum_probs=58.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++|+++|+|+ ||+|++++.+|++.|+ +|++++|+.++.+++++++..  ..+...  ++.+..          + 
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~--~~~~l~----------~-  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRIS--RYEALE----------G-  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEE--CSGGGT----------T-
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEe--eHHHhc----------c-
Confidence            5678999999998 6999999999999996 899999999999999988754  233332  222111          1 


Q ss_pred             cCCcccEEEeccccc
Q 024551           93 FDGKLNILVNNAALV  107 (266)
Q Consensus        93 ~~~~id~lv~~ag~~  107 (266)
                        ...|++||+.+..
T Consensus       180 --~~~DivInaTp~g  192 (272)
T 3pwz_A          180 --QSFDIVVNATSAS  192 (272)
T ss_dssp             --CCCSEEEECSSGG
T ss_pred             --cCCCEEEECCCCC
Confidence              2579999997653

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.76  E-value=7.8e-05  Score=64.85  Aligned_cols=99  Identities=17%  Similarity=0.212  Sum_probs=68.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+ +++|..++..+...|++|+.+++++++++...++   .|...   ..|..+.+.++       +.. +.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~~---v~~~~~~~~~~-------~~~-~~  251 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGADS---FLVSRDQEQMQ-------AAA-GT  251 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCSE---EEETTCHHHHH-------HTT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCce---EEeccCHHHHH-------Hhh-CC
Confidence            6899999996 9999999999999999999999998877654433   34332   23555543322       222 46


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                      +|++|+++|...                         .++.+++.|+.  .|++|.+++..
T Consensus       252 ~D~vid~~g~~~-------------------------~~~~~~~~l~~--~G~iv~~g~~~  285 (366)
T 1yqd_A          252 LDGIIDTVSAVH-------------------------PLLPLFGLLKS--HGKLILVGAPE  285 (366)
T ss_dssp             EEEEEECCSSCC-------------------------CSHHHHHHEEE--EEEEEECCCCS
T ss_pred             CCEEEECCCcHH-------------------------HHHHHHHHHhc--CCEEEEEccCC
Confidence            999999998531                         11234555544  57999998754

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.76  E-value=0.00012  Score=63.15  Aligned_cols=78  Identities=14%  Similarity=0.155  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||++++|.+.+..+...|++|+.+++++++++.+.+ +   |....   .|-.+  +.   .+.+.+..++.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---i~~~~--~~---~~~~~~~~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GADIV---LNHKE--SL---LNQFKTQGIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCSEE---ECTTS--CH---HHHHHHHTCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEE---EECCc--cH---HHHHHHhCCCC
Confidence            68999999999999999999999999999999999887655443 3   33322   23332  22   22333333357


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++++++|.
T Consensus       218 ~Dvv~d~~g~  227 (346)
T 3fbg_A          218 VDYVFCTFNT  227 (346)
T ss_dssp             EEEEEESSCH
T ss_pred             ccEEEECCCc
Confidence            9999999984

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.72  E-value=0.00013  Score=62.92  Aligned_cols=77  Identities=17%  Similarity=0.249  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|+++||+||++++|.+++..+...|++|+.+ +++++++.. ++   .+...    .| .+.+ ..+.+.+...  +..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~---lGa~~----i~-~~~~-~~~~~~~~~~--~~g  216 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RD---LGATP----ID-ASRE-PEDYAAEHTA--GQG  216 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HH---HTSEE----EE-TTSC-HHHHHHHHHT--TSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HH---cCCCE----ec-cCCC-HHHHHHHHhc--CCC
Confidence            58999999999999999999999999999988 777765433 33   34333    34 3322 2333333322  236


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|+++|.
T Consensus       217 ~D~vid~~g~  226 (343)
T 3gaz_A          217 FDLVYDTLGG  226 (343)
T ss_dssp             EEEEEESSCT
T ss_pred             ceEEEECCCc
Confidence            9999999983

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.68  E-value=8.9e-05  Score=62.75  Aligned_cols=95  Identities=15%  Similarity=0.088  Sum_probs=61.1

Q ss_pred             cCCCCE-EEEecCCC-----------------c-hHHHHHHHHHHCCCeEEEecCChhHH--------HHHHHHHHh---
Q 024551           15 SLRGMT-ALVTGGTR-----------------G-IGYAIVEELARFGASVHTCGRDQNMI--------NERIQEWES---   64 (266)
Q Consensus        15 ~~~~k~-vlItGas~-----------------g-iG~aia~~la~~G~~v~~~~r~~~~~--------~~~~~~l~~---   64 (266)
                      +++||. ||||+|..                 | .|.++|++++++|+.|+++.+.....        ..+.+.+..   
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            478888 99996654                 5 99999999999999999988743210        001111110   


Q ss_pred             cCCeeEEEeccCCCHHHHHHHHHHH------------------------------HhhcCCcccEEEecccccccc
Q 024551           65 KGFKVTGSVCDLSFGDQREKLIETV------------------------------SSVFDGKLNILVNNAALVVMK  110 (266)
Q Consensus        65 ~~~~~~~~~~D~~~~~~i~~~~~~~------------------------------~~~~~~~id~lv~~ag~~~~~  110 (266)
                      .+..+..+..|+...+++.+.+...                              .+.+ ++.|++|.+|++....
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~-~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPL-GPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGG-GGGEEEEECSBCCSEE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhcc-CCCCEEEECCchhhcc
Confidence            1123345566666666665555433                              2334 5789999999987544

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.67  E-value=0.0011  Score=57.08  Aligned_cols=82  Identities=22%  Similarity=0.258  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-GDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|+|+ +++|...+..+...|++|+.+++++++++...    +.+... +  .|.++ .+..+++.+...+..++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~-~--~~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGADV-T--LVVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSE-E--EECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----HhCCCE-E--EcCcccccHHHHHHHHhccccCC
Confidence            5899999997 89999999888889999999999988765432    334332 2  24443 22222222221100114


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|+++|.
T Consensus       240 g~D~vid~~g~  250 (352)
T 1e3j_A          240 LPNVTIDCSGN  250 (352)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.66  E-value=7.7e-05  Score=56.57  Aligned_cols=77  Identities=12%  Similarity=0.048  Sum_probs=56.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ..++.++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.+   ..  ...++..|.++++.+.+.      .. .
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~------~~-~   83 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKEC------GM-E   83 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTT------TG-G
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHc------Cc-c
Confidence            46789999996 999999999999999999999999876543221   22  344566788876543321      12 3


Q ss_pred             cccEEEeccc
Q 024551           96 KLNILVNNAA  105 (266)
Q Consensus        96 ~id~lv~~ag  105 (266)
                      ..|++|.+.+
T Consensus        84 ~ad~Vi~~~~   93 (155)
T 2g1u_A           84 KADMVFAFTN   93 (155)
T ss_dssp             GCSEEEECSS
T ss_pred             cCCEEEEEeC
Confidence            5899999887

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.66  E-value=0.00011  Score=57.17  Aligned_cols=79  Identities=16%  Similarity=0.110  Sum_probs=58.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++.++.++|.|+ |.+|..+++.|.+. |++|+++++++++.+.+.    +.+  +.++..|.++++.+.++     ..
T Consensus        35 ~~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g--~~~~~gd~~~~~~l~~~-----~~  102 (183)
T 3c85_A           35 INPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG--RNVISGDATDPDFWERI-----LD  102 (183)
T ss_dssp             BCCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT--CCEEECCTTCHHHHHTB-----CS
T ss_pred             cCCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC--CCEEEcCCCCHHHHHhc-----cC
Confidence            3466778889985 89999999999999 999999999998765543    233  44567899887654422     01


Q ss_pred             cCCcccEEEeccc
Q 024551           93 FDGKLNILVNNAA  105 (266)
Q Consensus        93 ~~~~id~lv~~ag  105 (266)
                      . ...|++|.+.+
T Consensus       103 ~-~~ad~vi~~~~  114 (183)
T 3c85_A          103 T-GHVKLVLLAMP  114 (183)
T ss_dssp             C-CCCCEEEECCS
T ss_pred             C-CCCCEEEEeCC
Confidence            2 46899998776

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.65  E-value=0.00022  Score=58.65  Aligned_cols=81  Identities=17%  Similarity=0.218  Sum_probs=61.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCCh-------------------hHHHHHHHHHHhcC--CeeEEE
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQ-------------------NMINERIQEWESKG--FKVTGS   72 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~-------------------~~~~~~~~~l~~~~--~~~~~~   72 (266)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++.+++++.                   .+.+.+++.+.+..  .++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            467899999997 6999999999999997 788999987                   78888888887653  355566


Q ss_pred             eccCCCHHHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           73 VCDLSFGDQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        73 ~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      ..++++ +++.+++        ...|++|.+.+
T Consensus       107 ~~~~~~-~~~~~~~--------~~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALI--------AEHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHH--------HTSSEEEECCS
T ss_pred             eccCCH-hHHHHHH--------hCCCEEEEeCC
Confidence            666653 3333332        24799998865

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.63  E-value=3.6e-05  Score=57.70  Aligned_cols=71  Identities=14%  Similarity=0.236  Sum_probs=53.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +++++|.|+ |++|+++++.|.+.|++|++++|++++.+++.+++.   ..+.    +..+.   .+.+.        ..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~~----~~~~~---~~~~~--------~~   81 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEYV----LINDI---DSLIK--------NN   81 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEEE----ECSCH---HHHHH--------TC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---CceE----eecCH---HHHhc--------CC
Confidence            899999997 999999999999999999999999999888777663   2211    22332   22222        47


Q ss_pred             cEEEeccccc
Q 024551           98 NILVNNAALV  107 (266)
Q Consensus        98 d~lv~~ag~~  107 (266)
                      |++|++.+..
T Consensus        82 Divi~at~~~   91 (144)
T 3oj0_A           82 DVIITATSSK   91 (144)
T ss_dssp             SEEEECSCCS
T ss_pred             CEEEEeCCCC
Confidence            9999998754

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.57  E-value=0.00024  Score=61.59  Aligned_cols=87  Identities=14%  Similarity=0.065  Sum_probs=53.0

Q ss_pred             CC-CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCH--HHHHHHHHHHHhhc
Q 024551           17 RG-MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG--DQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~-k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~i~~~~~~~~~~~   93 (266)
                      .| ++|+|+||++++|...+..+...|++|+.++++.+.+++..+.+++.|....+   |-.+.  +++.+.+.++....
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~i~~~t~~~  242 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQNNSREFGPTIKEWIKQS  242 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCccchHHHHHHHHHHhhcc
Confidence            47 99999999999999988877778999998887666533333333344433221   21110  12222222222001


Q ss_pred             CCcccEEEecccc
Q 024551           94 DGKLNILVNNAAL  106 (266)
Q Consensus        94 ~~~id~lv~~ag~  106 (266)
                      ++.+|++|.++|.
T Consensus       243 ~~g~Dvvid~~G~  255 (364)
T 1gu7_A          243 GGEAKLALNCVGG  255 (364)
T ss_dssp             TCCEEEEEESSCH
T ss_pred             CCCceEEEECCCc
Confidence            2469999999983

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.56  E-value=0.00024  Score=56.95  Aligned_cols=73  Identities=16%  Similarity=0.162  Sum_probs=57.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      .++|+|+ |.+|+.+++.|.++|+.|++++++++..+++.+..     .+.++..|.++++.++++-      . ...|+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~------i-~~ad~   68 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAE------V-SKNDV   68 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHT------C-CTTCE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcC------c-ccCCE
Confidence            5889997 88999999999999999999999998877655432     3567889999987765431      1 45788


Q ss_pred             EEeccc
Q 024551          100 LVNNAA  105 (266)
Q Consensus       100 lv~~ag  105 (266)
                      +|.+.+
T Consensus        69 vi~~~~   74 (218)
T 3l4b_C           69 VVILTP   74 (218)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            887765

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.52  E-value=0.00023  Score=59.99  Aligned_cols=74  Identities=15%  Similarity=0.184  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+++++|..++..+...|++|+.+++++++++... +   .+....   .|.++.++   +.+.+     +.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~~---~~~~~~~~---~~~~~-----~~  189 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAEEA---ATYAEVPE---RAKAW-----GG  189 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCSEE---EEGGGHHH---HHHHT-----TS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCEE---EECCcchh---HHHHh-----cC
Confidence            5899999999999999999999999999999999888765442 2   333221   34443112   22222     35


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|+ +|.
T Consensus       190 ~d~vid-~g~  198 (302)
T 1iz0_A          190 LDLVLE-VRG  198 (302)
T ss_dssp             EEEEEE-CSC
T ss_pred             ceEEEE-CCH
Confidence            999999 884

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.51  E-value=0.0014  Score=55.95  Aligned_cols=120  Identities=9%  Similarity=-0.036  Sum_probs=69.8

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~   86 (266)
                      +.++.+++++.|+|+ |.+|.+++..|+..|.  .++++++++++++-.+.++.+..   ..+.+.. |  +.       
T Consensus         3 ~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~-------   71 (326)
T 3vku_A            3 SITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EY-------   71 (326)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG-------
T ss_pred             ccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cH-------
Confidence            456677889999997 9999999999999987  79999999998887777776532   1222221 1  11       


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                          +.+ ...|++|..+|....      +.+.-.+.++.|..-...+.+.+    .+. .++.++++|...
T Consensus        72 ----~a~-~~aDiVvi~ag~~~k------pG~tR~dL~~~N~~I~~~i~~~i----~~~~p~a~ilvvtNPv  128 (326)
T 3vku_A           72 ----SDA-KDADLVVITAGAPQK------PGETRLDLVNKNLKILKSIVDPI----VDSGFNGIFLVAANPV  128 (326)
T ss_dssp             ----GGG-TTCSEEEECCCCC----------------------CHHHHHHHH----HTTTCCSEEEECSSSH
T ss_pred             ----HHh-cCCCEEEECCCCCCC------CCchHHHHHHHHHHHHHHHHHHH----HhcCCceEEEEccCch
Confidence                122 458999999997431      11222345666665555554444    443 356777776543

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.51  E-value=0.00017  Score=61.96  Aligned_cols=100  Identities=11%  Similarity=0.097  Sum_probs=66.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|+|+ +++|..++..+...|+ +|+.+++++++++...+ +    ...   ..|..+. ++.+.+.++.   +.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~~---v~~~~~~-~~~~~~~~~~---~~  230 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----ADR---LVNPLEE-DLLEVVRRVT---GS  230 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CSE---EECTTTS-CHHHHHHHHH---SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HHh---ccCcCcc-CHHHHHHHhc---CC
Confidence            7899999999 9999999998888999 89999999877543322 2    111   1344442 2333333332   24


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSV  156 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~  156 (266)
                      .+|++|.++|..                         ...+.+++.++.  .|+++.++..
T Consensus       231 g~D~vid~~g~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~  264 (343)
T 2dq4_A          231 GVEVLLEFSGNE-------------------------AAIHQGLMALIP--GGEARILGIP  264 (343)
T ss_dssp             CEEEEEECSCCH-------------------------HHHHHHHHHEEE--EEEEEECCCC
T ss_pred             CCCEEEECCCCH-------------------------HHHHHHHHHHhc--CCEEEEEecC
Confidence            699999999841                         112444555544  4799998764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.49  E-value=0.0006  Score=56.56  Aligned_cols=43  Identities=23%  Similarity=0.220  Sum_probs=39.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      +|+++|+|+ ||.|++++..|++.|.+|.++.|+.++.++++ ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            899999997 89999999999999999999999999988887 54

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.45  E-value=0.0032  Score=52.55  Aligned_cols=43  Identities=16%  Similarity=0.210  Sum_probs=37.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      |++.|.|+ |.+|.++|..|++.|++|++.+|+++.++...+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            57788876 77999999999999999999999999887776653

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.43  E-value=3.6e-05  Score=64.36  Aligned_cols=45  Identities=18%  Similarity=0.237  Sum_probs=39.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERI   59 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~   59 (266)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+.++.++++
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la  158 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS  158 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            3578999999998 7999999999999998 8999999998765444

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.42  E-value=0.00096  Score=57.99  Aligned_cols=79  Identities=14%  Similarity=0.154  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-GDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   94 (266)
                      .|++|||+|+ +++|...+..+...|+ +|+.+++++++++... +   .|....   .|.++ .+++.+.+.++..   
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~~~~~~~~---  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V---FGATDF---VNPNDHSEPISQVLSKMTN---  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCCEE---ECGGGCSSCHHHHHHHHHT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---hCCceE---EeccccchhHHHHHHHHhC---
Confidence            5899999996 8999999988888999 7999999988776433 2   343321   24332 1223333333322   


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.++|.
T Consensus       261 ~g~D~vid~~g~  272 (374)
T 1cdo_A          261 GGVDFSLECVGN  272 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999985

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.39  E-value=0.00054  Score=60.37  Aligned_cols=73  Identities=22%  Similarity=0.319  Sum_probs=55.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+++++++   +..  .  .+.   +++...+       
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~--~~~---~~l~~~l-------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGE--A--VRF---DELVDHL-------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCE--E--CCG---GGHHHHH-------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCc--e--ecH---HhHHHHh-------
Confidence            478999999998 9999999999999998 8999999998887777665   222  1  122   2232222       


Q ss_pred             CCcccEEEecccc
Q 024551           94 DGKLNILVNNAAL  106 (266)
Q Consensus        94 ~~~id~lv~~ag~  106 (266)
                       ...|++|++.|.
T Consensus       226 -~~aDvVi~at~~  237 (404)
T 1gpj_A          226 -ARSDVVVSATAA  237 (404)
T ss_dssp             -HTCSEEEECCSS
T ss_pred             -cCCCEEEEccCC
Confidence             247999999874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.37  E-value=0.0029  Score=54.29  Aligned_cols=101  Identities=14%  Similarity=0.175  Sum_probs=66.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHC--CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARF--GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .|++|+|+|+ +++|...+..+...  |++|+.+++++++++... ++   |....   .|..+.   ...++++.+  +
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~---~~~~~~~~~--g  236 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GADYV---SEMKDA---ESLINKLTD--G  236 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCSEE---ECHHHH---HHHHHHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCCEE---eccccc---hHHHHHhhc--C
Confidence            6899999999 89999998888888  999999999988765443 33   32221   132220   123333333  2


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                      ..+|++|.++|..                         ...+.+++.++.  .|+++.++...
T Consensus       237 ~g~D~vid~~g~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~  272 (344)
T 2h6e_A          237 LGASIAIDLVGTE-------------------------ETTYNLGKLLAQ--EGAIILVGMEG  272 (344)
T ss_dssp             CCEEEEEESSCCH-------------------------HHHHHHHHHEEE--EEEEEECCCCS
T ss_pred             CCccEEEECCCCh-------------------------HHHHHHHHHhhc--CCEEEEeCCCC
Confidence            3699999999842                         123344555544  57999887643

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.36  E-value=0.0047  Score=53.22  Aligned_cols=79  Identities=16%  Similarity=0.171  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCC--CHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS--FGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~   93 (266)
                      .|++|+|+|+ +++|...+..+...|+ +|+.+++++++++...    +.|... +  .|..  +.++.   .+++.+..
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~-v--i~~~~~~~~~~---~~~i~~~~  239 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK----EIGADL-V--LQISKESPQEI---ARKVEGQL  239 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCSE-E--EECSSCCHHHH---HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCCCE-E--EcCcccccchH---HHHHHHHh
Confidence            5899999996 8999999888878999 8999999887765432    334332 2  2433  22332   23333322


Q ss_pred             CCcccEEEecccc
Q 024551           94 DGKLNILVNNAAL  106 (266)
Q Consensus        94 ~~~id~lv~~ag~  106 (266)
                      ++.+|++|.++|.
T Consensus       240 ~~g~D~vid~~g~  252 (356)
T 1pl8_A          240 GCKPEVTIECTGA  252 (356)
T ss_dssp             TSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2359999999984

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.36  E-value=0.00089  Score=58.00  Aligned_cols=78  Identities=14%  Similarity=0.189  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+| ++++|...+..+...|++|+.+++++++++.. +++   |....   .| .+.+++.+.+.++..  +..
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~-~~~~~~~~~v~~~~~--g~g  257 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GADHG---IN-RLEEDWVERVYALTG--DRG  257 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSEE---EE-TTTSCHHHHHHHHHT--TCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCCEE---Ec-CCcccHHHHHHHHhC--CCC
Confidence            589999999 89999999988888999999999998877653 333   43322   24 333333333333322  136


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|++|.++|
T Consensus       258 ~D~vid~~g  266 (363)
T 3uog_A          258 ADHILEIAG  266 (363)
T ss_dssp             EEEEEEETT
T ss_pred             ceEEEECCC
Confidence            999999998

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.33  E-value=0.00092  Score=58.15  Aligned_cols=76  Identities=18%  Similarity=0.323  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||++++|..++..+...|++|+.+++ +++.+. ++   +.|....   .|.++.+-.    +++.+.  +.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~---~lGa~~v---~~~~~~~~~----~~~~~~--~g  248 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VR---KLGADDV---IDYKSGSVE----EQLKSL--KP  248 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HH---HTTCSEE---EETTSSCHH----HHHHTS--CC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HH---HcCCCEE---EECCchHHH----HHHhhc--CC
Confidence            6899999999999999999888889999988874 455433 23   3343322   244443322    223332  46


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|+++|.
T Consensus       249 ~D~vid~~g~  258 (375)
T 2vn8_A          249 FDFILDNVGG  258 (375)
T ss_dssp             BSEEEESSCT
T ss_pred             CCEEEECCCC
Confidence            9999999994

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.31  E-value=0.00094  Score=57.42  Aligned_cols=119  Identities=13%  Similarity=0.152  Sum_probs=71.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +.++++.|+|++|.+|..++..++.+|.  .|++++.++++++..+.+|......    ..++....+..+.+       
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~----~~~i~~t~d~~~al-------   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE----GLNLTFTSDIKEAL-------   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT----TCCCEEESCHHHHH-------
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC----CCceEEcCCHHHHh-------
Confidence            4578899999999999999999999994  6999999998887766666653210    01111111111111       


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCe-EEEEecC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNAS-IVFMSSV  156 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~-iv~vss~  156 (266)
                       ...|++|.++|....   ...+   -.+.++.|..-.-.+    .+.+.+. .++. |+++|..
T Consensus        75 -~dADvVvitaG~p~k---pG~~---R~dLl~~N~~I~~~i----~~~i~~~~p~a~~vlvvsNP  128 (343)
T 3fi9_A           75 -TDAKYIVSSGGAPRK---EGMT---REDLLKGNAEIAAQL----GKDIKSYCPDCKHVIIIFNP  128 (343)
T ss_dssp             -TTEEEEEECCC----------C---HHHHHHHHHHHHHHH----HHHHHHHCTTCCEEEECSSS
T ss_pred             -CCCCEEEEccCCCCC---CCCC---HHHHHHHHHHHHHHH----HHHHHHhccCcEEEEEecCc
Confidence             348999999996422   1112   233456665544444    4444443 3554 6666654

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.29  E-value=0.0016  Score=56.59  Aligned_cols=79  Identities=15%  Similarity=0.190  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-GDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   94 (266)
                      .|++|||+|+ +++|...+..+...|+ +|+.+++++++++... ++   |....   .|.++ .+++.+.+.++   .+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~v~~~---~~  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GATEC---INPQDFSKPIQEVLIEM---TD  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCSEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCceE---eccccccccHHHHHHHH---hC
Confidence            5899999996 8999999988888899 7999999988776443 33   33221   23332 12233333332   22


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.++|.
T Consensus       259 ~g~D~vid~~g~  270 (373)
T 2fzw_A          259 GGVDYSFECIGN  270 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCc
Confidence            469999999985

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.29  E-value=0.0017  Score=56.40  Aligned_cols=79  Identities=14%  Similarity=0.123  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-GDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   94 (266)
                      .|++|+|+|+ +++|...+..+...|+ +|+.+++++++++... +   .|....   .|.++ .+++.+.+.++.   +
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~~~~v~~~~---~  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-A---LGATDC---LNPRELDKPVQDVITELT---A  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHHHHHHHH---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCcEE---EccccccchHHHHHHHHh---C
Confidence            5899999996 8999999988888999 7999999988765432 2   343322   23332 122333333332   2


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.++|.
T Consensus       264 ~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 GGVDYSLDCAGT  275 (376)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            469999999985

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.29  E-value=0.0032  Score=54.70  Aligned_cols=94  Identities=15%  Similarity=0.182  Sum_probs=63.7

Q ss_pred             CCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccC---------
Q 024551            6 EPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDL---------   76 (266)
Q Consensus         6 ~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~---------   76 (266)
                      .|+++..-..+.+++|+|+|+ |.+|..+++.+...|++|++++|++++++...+    .|.+  ++..|+         
T Consensus       172 ~~~l~~~~~~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lGa~--~~~l~~~~~~~~gya  244 (381)
T 3p2y_A          172 VPMLTTAAGTVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VGAQ--WLDLGIDAAGEGGYA  244 (381)
T ss_dssp             SSCEECSSCEECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TTCE--ECCCC----------
T ss_pred             hhhhhcccCCcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCe--EEeccccccccccch
Confidence            366666667788999999999 789999999999999999999999988766544    2333  322221         


Q ss_pred             --CCHHHHHHHHHHHHhhcCCcccEEEeccccc
Q 024551           77 --SFGDQREKLIETVSSVFDGKLNILVNNAALV  107 (266)
Q Consensus        77 --~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~  107 (266)
                        ..++....-...+.+.. ...|++|.++.+.
T Consensus       245 ~~~~~~~~~~~~~~l~e~l-~~aDIVI~tv~iP  276 (381)
T 3p2y_A          245 RELSEAERAQQQQALEDAI-TKFDIVITTALVP  276 (381)
T ss_dssp             ---CHHHHHHHHHHHHHHH-TTCSEEEECCCCT
T ss_pred             hhhhHHHHhhhHHHHHHHH-hcCCEEEECCCCC
Confidence              00111222233344444 5689999987554

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.27  E-value=0.0012  Score=57.16  Aligned_cols=78  Identities=18%  Similarity=0.145  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHH-CCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~-~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|+||++++|...+..+.. .|++|+.+++++++++.+.    +.|....   .|-.+  +   +.+++.+..++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~----~lGad~v---i~~~~--~---~~~~v~~~~~~  238 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK----SLGAHHV---IDHSK--P---LAAEVAALGLG  238 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----HTTCSEE---ECTTS--C---HHHHHHTTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH----HcCCCEE---EeCCC--C---HHHHHHHhcCC
Confidence            588999999999999887765554 5899999999988765443    3343322   23332  2   23334443335


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|+++.++|.
T Consensus       239 g~Dvvid~~g~  249 (363)
T 4dvj_A          239 APAFVFSTTHT  249 (363)
T ss_dssp             CEEEEEECSCH
T ss_pred             CceEEEECCCc
Confidence            79999999984

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.26  E-value=0.0021  Score=53.96  Aligned_cols=92  Identities=11%  Similarity=0.171  Sum_probs=67.0

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCCh------------------hHHHHHHHHHHhcC--CeeEE
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQ------------------NMINERIQEWESKG--FKVTG   71 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~------------------~~~~~~~~~l~~~~--~~~~~   71 (266)
                      ...+++++|+|.|+ +|+|..+++.|+..|. ++.+++++.                  .+.+..++.+.+..  .++..
T Consensus        31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~  109 (292)
T 3h8v_A           31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV  109 (292)
T ss_dssp             -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence            34578899999998 7899999999999995 478888766                  56677777776654  46667


Q ss_pred             EeccCCCHHHHHHHHHHHHhhc---CCcccEEEeccc
Q 024551           72 SVCDLSFGDQREKLIETVSSVF---DGKLNILVNNAA  105 (266)
Q Consensus        72 ~~~D~~~~~~i~~~~~~~~~~~---~~~id~lv~~ag  105 (266)
                      +..++++.+.++.+++.+....   ....|+||.+..
T Consensus       110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            7778887777777776543211   025799987665

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.25  E-value=0.0017  Score=56.41  Aligned_cols=103  Identities=25%  Similarity=0.369  Sum_probs=67.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh---h
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS---V   92 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~---~   92 (266)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++++.+ +++++   |....   .|.++.+    +.+.+.+   .
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l---Ga~~v---i~~~~~~----~~~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEV---GATAT---VDPSAGD----VVEAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHH---TCSEE---ECTTSSC----HHHHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHc---CCCEE---ECCCCcC----HHHHHHhhhhc
Confidence            5899999998 8999998888888999 7888888887765 33333   43322   2444432    2233333   3


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG  158 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~  158 (266)
                      .++.+|++|.++|..          +               ..+.+++.++.  .|+++.++....
T Consensus       250 ~~gg~Dvvid~~G~~----------~---------------~~~~~~~~l~~--~G~vv~~G~~~~  288 (370)
T 4ej6_A          250 VPGGVDVVIECAGVA----------E---------------TVKQSTRLAKA--GGTVVILGVLPQ  288 (370)
T ss_dssp             STTCEEEEEECSCCH----------H---------------HHHHHHHHEEE--EEEEEECSCCCT
T ss_pred             cCCCCCEEEECCCCH----------H---------------HHHHHHHHhcc--CCEEEEEeccCC
Confidence            335799999999842          1               22334555544  579998876543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.21  E-value=0.00032  Score=58.69  Aligned_cols=47  Identities=19%  Similarity=0.209  Sum_probs=41.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQE   61 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~   61 (266)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+.++.+++++.
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~  165 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE  165 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh
Confidence            4578999999998 6999999999999998 899999999887766654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.19  E-value=0.00083  Score=58.01  Aligned_cols=100  Identities=14%  Similarity=0.126  Sum_probs=64.1

Q ss_pred             CCCCEEEEecCCCchHHHH-HHHH-HHCCCe-EEEecCChh---HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           16 LRGMTALVTGGTRGIGYAI-VEEL-ARFGAS-VHTCGRDQN---MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        16 ~~~k~vlItGas~giG~ai-a~~l-a~~G~~-v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      +++++|+|+|+ |++|... +..+ ...|++ |+.++++++   +++.. ++   .|..  .+  |..+.+ +.+ +.++
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~---lGa~--~v--~~~~~~-~~~-i~~~  239 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EE---LDAT--YV--DSRQTP-VED-VPDV  239 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HH---TTCE--EE--ETTTSC-GGG-HHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HH---cCCc--cc--CCCccC-HHH-HHHh
Confidence            34499999999 9999998 6655 567998 999999887   65543 22   3432  22  444322 222 3333


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                         . +.+|++|.++|...                         ..+.+++.++.  .|+++.++...
T Consensus       240 ---~-gg~Dvvid~~g~~~-------------------------~~~~~~~~l~~--~G~iv~~g~~~  276 (357)
T 2b5w_A          240 ---Y-EQMDFIYEATGFPK-------------------------HAIQSVQALAP--NGVGALLGVPS  276 (357)
T ss_dssp             ---S-CCEEEEEECSCCHH-------------------------HHHHHHHHEEE--EEEEEECCCCC
T ss_pred             ---C-CCCCEEEECCCChH-------------------------HHHHHHHHHhc--CCEEEEEeCCC
Confidence               2 47999999998421                         12334455544  57999987654

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.19  E-value=0.0016  Score=56.64  Aligned_cols=79  Identities=15%  Similarity=0.155  Sum_probs=54.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      -.|++|+|+|+++++|...+..+...|++|+.+. ++++++ .++   +.|....   .|..+.+    +.+.+.+..++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~---~lGa~~v---i~~~~~~----~~~~v~~~t~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAK---SRGAEEV---FDYRAPN----LAQTIRTYTKN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHH---HTTCSEE---EETTSTT----HHHHHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHH---HcCCcEE---EECCCch----HHHHHHHHccC
Confidence            4689999999999999999998888999998876 555544 333   3343322   2444432    23333443335


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      ++|++|.++|.
T Consensus       231 ~~d~v~d~~g~  241 (371)
T 3gqv_A          231 NLRYALDCITN  241 (371)
T ss_dssp             CCCEEEESSCS
T ss_pred             CccEEEECCCc
Confidence            69999999995

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.18  E-value=0.0024  Score=54.66  Aligned_cols=77  Identities=19%  Similarity=0.195  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+ +++|...+..+...|++|+.+++++++++..    ++.|....   .|..+.+-.+.+.    +.. +.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~~---i~~~~~~~~~~~~----~~~-g~  232 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA----RRLGAEVA---VNARDTDPAAWLQ----KEI-GG  232 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEE---EETTTSCHHHHHH----HHH-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HHcCCCEE---EeCCCcCHHHHHH----HhC-CC
Confidence            6899999997 8999999988888999999999998877643    23343332   2444433333222    223 57


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|.++|.
T Consensus       233 ~d~vid~~g~  242 (340)
T 3s2e_A          233 AHGVLVTAVS  242 (340)
T ss_dssp             EEEEEESSCC
T ss_pred             CCEEEEeCCC
Confidence            9999999873

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.17  E-value=0.00044  Score=58.97  Aligned_cols=75  Identities=21%  Similarity=0.119  Sum_probs=49.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +++|+|+++++|...+..+...|++|+.+++++++++...    +.|....   .|..+.+  .+.+.++   .++.+|+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~----~lGa~~~---i~~~~~~--~~~~~~~---~~~~~d~  219 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKEV---LAREDVM--AERIRPL---DKQRWAA  219 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSEE---EECC-----------C---CSCCEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HcCCcEE---EecCCcH--HHHHHHh---cCCcccE
Confidence            7999999999999999988889999999999887765443    2343322   2444332  1222222   2246999


Q ss_pred             EEecccc
Q 024551          100 LVNNAAL  106 (266)
Q Consensus       100 lv~~ag~  106 (266)
                      +|.++|.
T Consensus       220 vid~~g~  226 (328)
T 1xa0_A          220 AVDPVGG  226 (328)
T ss_dssp             EEECSTT
T ss_pred             EEECCcH
Confidence            9999984

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.14  E-value=0.0031  Score=54.95  Aligned_cols=79  Identities=14%  Similarity=0.194  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCC--CHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS--FGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~--~~~~i~~~~~~~~~~~   93 (266)
                      .|++|||+| ++++|...+..+...| ++|+.+++++++++.+.    +.|... +  .|..  +.+++.   +++.+..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~-v--i~~~~~~~~~~~---~~v~~~~  263 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----EIGADL-T--LNRRETSVEERR---KAIMDIT  263 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----HTTCSE-E--EETTTSCHHHHH---HHHHHHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH----HcCCcE-E--EeccccCcchHH---HHHHHHh
Confidence            589999999 8999999998888899 59999999988765443    334332 2  2333  233333   3333333


Q ss_pred             CC-cccEEEecccc
Q 024551           94 DG-KLNILVNNAAL  106 (266)
Q Consensus        94 ~~-~id~lv~~ag~  106 (266)
                      ++ .+|++|.++|.
T Consensus       264 ~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          264 HGRGADFILEATGD  277 (380)
T ss_dssp             TTSCEEEEEECSSC
T ss_pred             CCCCCcEEEECCCC
Confidence            22 69999999984

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.13  E-value=0.0023  Score=55.33  Aligned_cols=78  Identities=15%  Similarity=0.144  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++|+|+|+ +++|...+..+... |++|+.+++++++++...    +.|....   .|.++.  +.+.+.++..  +.
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~--~~~~v~~~~~--g~  253 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADHV---VDARRD--PVKQVMELTR--GR  253 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSEE---EETTSC--HHHHHHHHTT--TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----HhCCCEE---Eeccch--HHHHHHHHhC--CC
Confidence            5899999999 89999988877778 999999999988765443    2343322   244443  3333333322  12


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.++|.
T Consensus       254 g~Dvvid~~G~  264 (359)
T 1h2b_A          254 GVNVAMDFVGS  264 (359)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCcEEEECCCC
Confidence            69999999985

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.12  E-value=0.0033  Score=55.25  Aligned_cols=43  Identities=16%  Similarity=0.224  Sum_probs=38.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      .+.+++|+|+|+ |.+|..+++.+...|++|+++++++++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467999999997 8999999999999999999999999887654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.10  E-value=0.0084  Score=51.12  Aligned_cols=115  Identities=10%  Similarity=-0.019  Sum_probs=73.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC----CeeEEEeccCCCHHHHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG----FKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +.+++.|+|+ |.+|.+++..|+..|.  .|+++++++++++..+.+|.+..    ..+.....|   .           
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------
Confidence            3568999996 9999999999999996  79999999998887777776531    122222111   1           


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                      +.+ ..-|++|.++|.... +  ..+..   +.++.|..-.-.+    .+.+.+. .++.+++++...
T Consensus        69 ~a~-~~aDvVvi~ag~p~k-p--G~~R~---dL~~~N~~Iv~~i----~~~I~~~~p~a~vlvvtNPv  125 (326)
T 3pqe_A           69 EDC-KDADIVCICAGANQK-P--GETRL---ELVEKNLKIFKGI----VSEVMASGFDGIFLVATNPV  125 (326)
T ss_dssp             GGG-TTCSEEEECCSCCCC-T--TCCHH---HHHHHHHHHHHHH----HHHHHHTTCCSEEEECSSSH
T ss_pred             HHh-CCCCEEEEecccCCC-C--CccHH---HHHHHHHHHHHHH----HHHHHHhcCCeEEEEcCChH
Confidence            112 358999999996432 1  12333   2455565444444    4444443 356777777644

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.05  E-value=0.0039  Score=54.61  Aligned_cols=54  Identities=15%  Similarity=0.171  Sum_probs=45.5

Q ss_pred             CCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHH
Q 024551            6 EPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ   60 (266)
Q Consensus         6 ~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~   60 (266)
                      .|++++.-..+.+.+|+|+|+ |.+|..+++.+...|++|+++++++++++...+
T Consensus       178 ~~~l~t~~g~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          178 LPMMMTAAGTVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             SSCEEETTEEECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             hchhhccCCCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            456666666678999999999 799999999999999999999999988765543

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.03  E-value=0.0015  Score=55.50  Aligned_cols=73  Identities=15%  Similarity=0.120  Sum_probs=50.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |+ ++|+|+++++|...+..+...|++|+.+++++++.+.+.+ +   |....+   |-.+.+.       +.+..++.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~vi---~~~~~~~-------~~~~~~~~~  212 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L---GANRIL---SRDEFAE-------SRPLEKQLW  212 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H---TCSEEE---EGGGSSC-------CCSSCCCCE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEEE---ecCCHHH-------HHhhcCCCc
Confidence            46 9999999999999999888999999999999887755433 3   433322   2222111       122223569


Q ss_pred             cEEEeccc
Q 024551           98 NILVNNAA  105 (266)
Q Consensus        98 d~lv~~ag  105 (266)
                      |++|.++|
T Consensus       213 d~v~d~~g  220 (324)
T 3nx4_A          213 AGAIDTVG  220 (324)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999887

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.00  E-value=0.0073  Score=51.23  Aligned_cols=118  Identities=15%  Similarity=0.087  Sum_probs=71.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCC--hhHHHHHHHHHHhc------CCeeEEEeccCCCHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRD--QNMINERIQEWESK------GFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~--~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~i~~   84 (266)
                      |.++.+.+.|+|+ |.+|.+++..|+.+|. .|++.+++  ++..+-...++.+.      ..++..  .  +|.     
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t--~d~-----   73 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--T--SDY-----   73 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--E--SCG-----
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--c--CCH-----
Confidence            4456788999997 9999999999999999 99999999  55555444444321      112221  1  111     


Q ss_pred             HHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           85 LIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        85 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                            +.+ ...|++|.++|.....   ..+..   +.++.|..-.-.+.+.+.+   ..+++.++++|...
T Consensus        74 ------~a~-~~aDvVIiaag~p~kp---g~~R~---dl~~~N~~i~~~i~~~i~~---~~p~a~vlvvsNPv  130 (315)
T 3tl2_A           74 ------ADT-ADSDVVVITAGIARKP---GMSRD---DLVATNSKIMKSITRDIAK---HSPNAIIVVLTNPV  130 (315)
T ss_dssp             ------GGG-TTCSEEEECCSCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHH---HCTTCEEEECCSSH
T ss_pred             ------HHh-CCCCEEEEeCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHH---hCCCeEEEECCChH
Confidence                  122 4589999999975321   22333   3455555444444444432   23456777777543

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.98  E-value=0.0026  Score=55.25  Aligned_cols=79  Identities=14%  Similarity=0.197  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-GDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   94 (266)
                      .|++|+|+|+ +++|..++..+...|+ +|+.+++++++++... +   .|....   .|.++ .+++.+.+.++   .+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~~~~~~---~~  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-E---VGATEC---VNPQDYKKPIQEVLTEM---SN  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCceE---ecccccchhHHHHHHHH---hC
Confidence            5899999995 8999999988888999 7999999988775442 2   343321   24332 12233333333   22


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.++|.
T Consensus       260 ~g~D~vid~~g~  271 (374)
T 2jhf_A          260 GGVDFSFEVIGR  271 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            469999999985

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.97  E-value=0.0016  Score=56.82  Aligned_cols=81  Identities=15%  Similarity=0.144  Sum_probs=54.9

Q ss_pred             CCCCEEEEec-CCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTG-GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItG-as~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      -.|++++|.| |++++|...+..+...|++|+.+++++++++.+.    +.|....   .|-.+.+-.++ +.++...  
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---~~~~~~~~~~~-v~~~t~~--  238 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK----AQGAVHV---CNAASPTFMQD-LTEALVS--  238 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH----HTTCSCE---EETTSTTHHHH-HHHHHHH--
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCcEE---EeCCChHHHHH-HHHHhcC--
Confidence            3588999997 9999999999888888999999999988765443    2343322   23343322222 2222221  


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      ..+|++|.++|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            259999999995

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.96  E-value=0.0045  Score=50.80  Aligned_cols=82  Identities=15%  Similarity=0.138  Sum_probs=56.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh-------------------hHHHHHHHHHHhcCC--eeEE
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ-------------------NMINERIQEWESKGF--KVTG   71 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~-------------------~~~~~~~~~l~~~~~--~~~~   71 (266)
                      ..+++++|+|.|+ ||+|.++++.|+..|.. +.+++++.                   .+.+.+++.+.+...  ++..
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  102 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA  102 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence            3467899999998 67999999999999974 67775542                   566777777776533  4555


Q ss_pred             EeccCCCHHHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           72 SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        72 ~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      +..+++. +.+.+++.        ..|++|.+..
T Consensus       103 ~~~~~~~-~~~~~~~~--------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLTG-EALKDAVA--------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCCH-HHHHHHHH--------HCSEEEECCS
T ss_pred             EeccCCH-HHHHHHHh--------cCCEEEECCC
Confidence            5555543 34433332        4699988754

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.94  E-value=0.0037  Score=54.92  Aligned_cols=78  Identities=22%  Similarity=0.251  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD-   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   94 (266)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++++++.. +++   |....   .|-.+.+    +.+++.+..+ 
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~----~~~~i~~~t~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GADHV---IDPTKEN----FVEAVLDYTNG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSEE---ECTTTSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCEE---EcCCCCC----HHHHHHHHhCC
Confidence            6899999998 8999998888888999 899999998876533 333   43322   2444332    2233333332 


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      ..+|++|.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            369999999985

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.93  E-value=0.00088  Score=55.14  Aligned_cols=44  Identities=16%  Similarity=0.267  Sum_probs=37.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQ   60 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~   60 (266)
                      +++| +++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~  150 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF  150 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            4578 8999997 8999999999999998 89999999987665544

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.91  E-value=0.0018  Score=51.40  Aligned_cols=43  Identities=21%  Similarity=0.400  Sum_probs=38.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      +++|+||+|.+|.++++.|+++|++|.+++|+++..+++.+.+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999998877766543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.90  E-value=0.0042  Score=52.73  Aligned_cols=116  Identities=16%  Similarity=0.130  Sum_probs=68.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhcCC--eeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           20 TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESKGF--KVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++.|+||+|.+|..++..|+.+|  ..|+++++++  .+....++.+...  ++.... .   ..+.+..+        .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~-~---t~d~~~a~--------~   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL-G---PEQLPDCL--------K   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE-S---GGGHHHHH--------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec-C---CCCHHHHh--------C
Confidence            58999999999999999999988  6799999987  3344445544321  122110 0   01222222        3


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAG  158 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~  158 (266)
                      ..|++|+++|......   .+..   +.+..|+.....+.+.+.++   ..++.||++|....
T Consensus        68 ~aDvVvi~ag~~~~~g---~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~  121 (314)
T 1mld_A           68 GCDVVVIPAGVPRKPG---MTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISNPVN  121 (314)
T ss_dssp             TCSEEEECCSCCCCTT---CCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHH
T ss_pred             CCCEEEECCCcCCCCC---CcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcc
Confidence            4799999999753211   1111   23455555555554444322   24678888766543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.89  E-value=0.0026  Score=55.35  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-GDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   94 (266)
                      .|++|+|+|+ +++|...+..+...|+ +|+.+++++++++. ++   +.|....   .|..+ .+++.+   .+.+..+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~-a~---~lGa~~v---i~~~~~~~~~~~---~i~~~~~  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET-AK---KFGVNEF---VNPKDHDKPIQE---VIVDLTD  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH-HH---TTTCCEE---ECGGGCSSCHHH---HHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-HH---HcCCcEE---EccccCchhHHH---HHHHhcC
Confidence            5899999998 9999999888888899 79999999887753 22   3343322   23331 122333   3333333


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.++|.
T Consensus       262 gg~D~vid~~g~  273 (378)
T 3uko_A          262 GGVDYSFECIGN  273 (378)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.88  E-value=0.0038  Score=54.17  Aligned_cols=74  Identities=16%  Similarity=0.172  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++|||+|+ +++|...+..+...|++|+.+++++++++...+ +   |....   .|..+.+.+    +++   . +.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l---Ga~~v---i~~~~~~~~----~~~---~-~g  257 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L---GADEV---VNSRNADEM----AAH---L-KS  257 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSEE---EETTCHHHH----HTT---T-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCcEE---eccccHHHH----HHh---h-cC
Confidence            5899999998 789999998888899999999999888765443 3   33221   355554322    222   1 36


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|.++|.
T Consensus       258 ~Dvvid~~g~  267 (369)
T 1uuf_A          258 FDFILNTVAA  267 (369)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCC
Confidence            9999999985

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.85  E-value=0.00073  Score=57.90  Aligned_cols=118  Identities=14%  Similarity=0.195  Sum_probs=70.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC--e-----EEEecCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA--S-----VHTCGRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~--~-----v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++|+||||+|.||.+++..|+.+|.  .     ++++++++  +.++-.+.+|........   .++....+..+.    
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~---~~~~~~~~~~~~----   76 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL---KDVIATDKEEIA----   76 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE---EEEEEESCHHHH----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc---CCEEEcCCcHHH----
Confidence            5799999999999999999998875  4     89999874  456666666665321111   111111111111    


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CC-eEEEEecCC
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NA-SIVFMSSVA  157 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g-~iv~vss~~  157 (266)
                         + ...|++|+.||.....   ..+   -.+.++.|....-.+.    +.+.+.. ++ +++++|...
T Consensus        77 ---~-~daDvVvitAg~prkp---G~t---R~dll~~N~~i~~~i~----~~i~~~~~~~~~vivvsNPv  132 (333)
T 5mdh_A           77 ---F-KDLDVAILVGSMPRRD---GME---RKDLLKANVKIFKCQG----AALDKYAKKSVKVIVVGNPA  132 (333)
T ss_dssp             ---T-TTCSEEEECCSCCCCT---TCC---TTTTHHHHHHHHHHHH----HHHHHHSCTTCEEEECSSSH
T ss_pred             ---h-CCCCEEEEeCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHHHhCCCCeEEEEcCCch
Confidence               2 3589999999865321   111   2234666666555554    4445543 45 577777643

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.85  E-value=0.0018  Score=55.64  Aligned_cols=70  Identities=21%  Similarity=0.280  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++|+|+|+ +++|...+..+...|++|+.+++++++.+...    +.|....+     ++.+.+.           ..
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v~-----~~~~~~~-----------~~  234 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL----SMGVKHFY-----TDPKQCK-----------EE  234 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH----HTTCSEEE-----SSGGGCC-----------SC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----hcCCCeec-----CCHHHHh-----------cC
Confidence            5899999997 89999998888889999999999988776432    33443322     3333221           15


Q ss_pred             ccEEEeccccc
Q 024551           97 LNILVNNAALV  107 (266)
Q Consensus        97 id~lv~~ag~~  107 (266)
                      +|++|.++|..
T Consensus       235 ~D~vid~~g~~  245 (348)
T 3two_A          235 LDFIISTIPTH  245 (348)
T ss_dssp             EEEEEECCCSC
T ss_pred             CCEEEECCCcH
Confidence            99999999853

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.83  E-value=0.0012  Score=56.91  Aligned_cols=82  Identities=16%  Similarity=0.208  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC--
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD--   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--   94 (266)
                      .|++|||+||+|++|...+..+...|++++.+.+..+..++..+.+++.|....+   |   ..+..  .+.+.+...  
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~---~~~~~--~~~~~~~~~~~  238 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---T---EEELR--RPEMKNFFKDM  238 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---E---HHHHH--SGGGGGTTSSS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---e---cCcch--HHHHHHHHhCC
Confidence            5899999999999999988877778999887766543322223334444543222   2   11100  112222221  


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.++|.
T Consensus       239 ~~~Dvvid~~g~  250 (357)
T 1zsy_A          239 PQPRLALNCVGG  250 (357)
T ss_dssp             CCCSEEEESSCH
T ss_pred             CCceEEEECCCc
Confidence            248999999884

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.82  E-value=0.0019  Score=52.25  Aligned_cols=72  Identities=8%  Similarity=-0.081  Sum_probs=53.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      .+.++|.|+ +.+|+.+++.|.++|+ |++++++++..+.+.     .  .+.++..|.++++.++++-      . ...
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a~------i-~~a   72 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKAN------V-RGA   72 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHTT------C-TTC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhcC------c-chh
Confidence            457888997 8999999999999999 999999988765443     2  3667788998887654430      1 346


Q ss_pred             cEEEeccc
Q 024551           98 NILVNNAA  105 (266)
Q Consensus        98 d~lv~~ag  105 (266)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (234)
T 2aef_A           73 RAVIVDLE   80 (234)
T ss_dssp             SEEEECCS
T ss_pred             cEEEEcCC
Confidence            77776654

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.80  E-value=0.0029  Score=54.81  Aligned_cols=47  Identities=21%  Similarity=0.307  Sum_probs=42.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      +++||+++|.|. +.+|..+|+.|.+.|++|++.+++.+++++.++++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999997 78999999999999999999999998888777765

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.77  E-value=0.0028  Score=54.70  Aligned_cols=75  Identities=17%  Similarity=0.175  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+ +++|...+..+...|++|+.+++++++++...++   .|....   .|..+.+.+       .+.. +.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~---lGa~~v---i~~~~~~~~-------~~~~-~g  244 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD---LGADDY---VIGSDQAKM-------SELA-DS  244 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT---SCCSCE---EETTCHHHH-------HHST-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH---cCCcee---eccccHHHH-------HHhc-CC
Confidence            6899999995 9999999988888899999999988876544423   343321   244443322       2222 46


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|.++|.
T Consensus       245 ~D~vid~~g~  254 (357)
T 2cf5_A          245 LDYVIDTVPV  254 (357)
T ss_dssp             EEEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.77  E-value=0.0057  Score=52.98  Aligned_cols=78  Identities=12%  Similarity=0.177  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++|+|+|+ +++|...+..+...|+ +|+.+++++++++.. +++   |....   .|..+.+    +.+++.+..++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~----~~~~~~~~~~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATHV---INSKTQD----PVAAIKEITDG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSEE---EETTTSC----HHHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCCEE---ecCCccC----HHHHHHHhcCC
Confidence            5899999995 8999999888777899 588999988876544 333   33222   2333322    22233333324


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.++|.
T Consensus       258 g~D~vid~~g~  268 (371)
T 1f8f_A          258 GVNFALESTGS  268 (371)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999984

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.77  E-value=0.0041  Score=53.91  Aligned_cols=79  Identities=20%  Similarity=0.244  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-GDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   94 (266)
                      .|++|+|+|+ +++|...+..+...|+ +|+.+++++++++... +   .|....   .|..+ .+++.+.+   .+..+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~~~~i---~~~t~  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E---LGATEC---LNPKDYDKPIYEVI---CEKTN  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHHHH---HHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H---cCCcEE---EecccccchHHHHH---HHHhC
Confidence            5899999996 8999999888777898 7999999988775433 2   343322   23332 11222223   33222


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.++|.
T Consensus       260 gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 GGVDYAVECAGR  271 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999985

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.75  E-value=0.0037  Score=54.61  Aligned_cols=45  Identities=18%  Similarity=0.119  Sum_probs=39.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERI   59 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~   59 (266)
                      ..+.+++++|+|+ |++|+.+++.+...|++|++++|++++++...
T Consensus       168 ~~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          168 GTVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EEECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            4678999999996 89999999999999999999999988766543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.74  E-value=0.011  Score=50.42  Aligned_cols=119  Identities=8%  Similarity=0.006  Sum_probs=75.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ....+.+.|+|+ |.+|.+++..|+.+|.  .|+++++++++++..+.++....   .....+..  .|.+         
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~---------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS---------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH---------
Confidence            345788999998 8999999999999997  79999999998888777776531   11112211  1221         


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                        .+ ..-|++|.++|.....   ..+..   +.++.|..-.-.+.+.+.++   ..++.++++|...
T Consensus        84 --~~-~~aDiVvi~aG~~~kp---G~tR~---dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPv  139 (331)
T 4aj2_A           84 --VT-ANSKLVIITAGARQQE---GESRL---NLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPV  139 (331)
T ss_dssp             --GG-TTEEEEEECCSCCCCT---TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             --Hh-CCCCEEEEccCCCCCC---CccHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChH
Confidence              12 4589999999975321   11222   24555554444444444332   3457788777654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.73  E-value=0.0057  Score=53.49  Aligned_cols=80  Identities=20%  Similarity=0.304  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++|+|+|+ +++|...+..+...|+ +|+.+++++++++.. +   +.|..  .  .|.++.+.+.+.+.++..  +.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~--~--i~~~~~~~~~~~v~~~t~--g~  253 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-K---AQGFE--I--ADLSLDTPLHEQIAALLG--EP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-H---HTTCE--E--EETTSSSCHHHHHHHHHS--SS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-H---HcCCc--E--EccCCcchHHHHHHHHhC--CC
Confidence            5899999995 9999998887777899 688889988876544 2   33443  2  344433222222222221  13


Q ss_pred             cccEEEeccccc
Q 024551           96 KLNILVNNAALV  107 (266)
Q Consensus        96 ~id~lv~~ag~~  107 (266)
                      .+|++|.++|..
T Consensus       254 g~Dvvid~~G~~  265 (398)
T 1kol_A          254 EVDCAVDAVGFE  265 (398)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999964

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.72  E-value=0.016  Score=49.34  Aligned_cols=117  Identities=9%  Similarity=0.038  Sum_probs=69.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ++.+.+.|+|+ |.+|.+++..|+..|. .|+++++++++++....++...    +....+...  +|.+          
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~----------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYA----------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGG----------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHH----------
Confidence            45678999998 9999999999999998 9999999998876555555432    111211111  1211          


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                       .+ ..-|++|..+|......   .+.   .+.+..|..-    .+.+.+.+.+. .++.++++|...
T Consensus        72 -a~-~~aDiVIiaag~p~k~G---~~R---~dl~~~N~~i----~~~i~~~i~~~~p~a~iivvtNPv  127 (324)
T 3gvi_A           72 -AI-EGADVVIVTAGVPRKPG---MSR---DDLLGINLKV----MEQVGAGIKKYAPEAFVICITNPL  127 (324)
T ss_dssp             -GG-TTCSEEEECCSCCCC-----------CHHHHHHHHH----HHHHHHHHHHHCTTCEEEECCSSH
T ss_pred             -HH-CCCCEEEEccCcCCCCC---CCH---HHHHHhhHHH----HHHHHHHHHHHCCCeEEEecCCCc
Confidence             12 35799999999753211   111   1234445443    44444444443 456777777644

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.72  E-value=0.0051  Score=52.86  Aligned_cols=78  Identities=21%  Similarity=0.267  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC-
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD-   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-   94 (266)
                      .|++++|+|+ +++|...+..+...|+ +|+.+++++++++. ++++   |....   .|-++.+    +.+++.+..+ 
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~~~l---Ga~~v---i~~~~~~----~~~~v~~~t~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI-ALEY---GATDI---INYKNGD----IVEQILKATDG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH-HHHH---TCCEE---ECGGGSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH-HHHh---CCceE---EcCCCcC----HHHHHHHHcCC
Confidence            5889999986 8999998888888899 79999998877643 3333   43322   2333322    2233333332 


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      ..+|++|.++|.
T Consensus       234 ~g~D~v~d~~g~  245 (352)
T 3fpc_A          234 KGVDKVVIAGGD  245 (352)
T ss_dssp             CCEEEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            369999999985

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.71  E-value=0.0074  Score=50.29  Aligned_cols=42  Identities=10%  Similarity=0.044  Sum_probs=37.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ   60 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~   60 (266)
                      +++.|.|++|.+|.++++.|++.|++|++++|+++..+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            579999999999999999999999999999999988776554

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.70  E-value=0.0085  Score=52.43  Aligned_cols=80  Identities=15%  Similarity=0.231  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++|+|+|+ +++|...+..+...|+ +|+.+++++++++..    ++.|..  +  .|..+.+.+.+.+.++..  +.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~--~--i~~~~~~~~~~~~~~~~~--g~  253 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----SDAGFE--T--IDLRNSAPLRDQIDQILG--KP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HTTTCE--E--EETTSSSCHHHHHHHHHS--SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCc--E--EcCCCcchHHHHHHHHhC--CC
Confidence            5899999997 9999998887777899 899999998876533    333443  2  344432211112222221  12


Q ss_pred             cccEEEeccccc
Q 024551           96 KLNILVNNAALV  107 (266)
Q Consensus        96 ~id~lv~~ag~~  107 (266)
                      .+|++|.++|..
T Consensus       254 g~Dvvid~~g~~  265 (398)
T 2dph_A          254 EVDCGVDAVGFE  265 (398)
T ss_dssp             CEEEEEECSCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999853

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.68  E-value=0.0033  Score=54.26  Aligned_cols=75  Identities=16%  Similarity=0.089  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+ +++|..++..+...|++|+.+++++++++...+ +   |....   .|..+..+   +.+++.    +.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---~~~~~~~~---~~~~~~----~~  243 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M---GADHY---IATLEEGD---WGEKYF----DT  243 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EEGGGTSC---HHHHSC----SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c---CCCEE---EcCcCchH---HHHHhh----cC
Confidence            5899999999 999999998888899999999998887654433 3   33222   23332201   122221    36


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|.++|.
T Consensus       244 ~D~vid~~g~  253 (360)
T 1piw_A          244 FDLIVVCASS  253 (360)
T ss_dssp             EEEEEECCSC
T ss_pred             CCEEEECCCC
Confidence            9999999986

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.68  E-value=0.0087  Score=51.14  Aligned_cols=90  Identities=10%  Similarity=0.130  Sum_probs=56.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh-------------------hHHHHHHHHHHhcCC--eeEEE
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ-------------------NMINERIQEWESKGF--KVTGS   72 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~-------------------~~~~~~~~~l~~~~~--~~~~~   72 (266)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++++.                   .+.+..++.+.+...  ++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            567899999998 78999999999999965 77776643                   456667777766544  44444


Q ss_pred             eccC-------CCHHHHHHHHHHHHhhcCCcccEEEecccc
Q 024551           73 VCDL-------SFGDQREKLIETVSSVFDGKLNILVNNAAL  106 (266)
Q Consensus        73 ~~D~-------~~~~~i~~~~~~~~~~~~~~id~lv~~ag~  106 (266)
                      ..++       ++++....-.+.+.+.+ ...|+||++..-
T Consensus       110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l-~~~DlVvd~tDn  149 (340)
T 3rui_A          110 KLSIPMIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVDS  149 (340)
T ss_dssp             CCCCCCTTSCCSCHHHHHHHHHHHHHHH-HHCSEEEECCSS
T ss_pred             eccccccCcccchhhhhcCCHHHHHhhh-ccCCEEEecCCC
Confidence            4443       22211111111222222 357888887663

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.64  E-value=0.0041  Score=52.73  Aligned_cols=74  Identities=14%  Similarity=0.190  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+||++++|...+..+...|++|+.+.++ ++ .+.++++   |....   .|..+.+...       +.. ..
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~~~~~l---Ga~~~---i~~~~~~~~~-------~~~-~g  215 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HAFLKAL---GAEQC---INYHEEDFLL-------AIS-TP  215 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HHHHHHH---TCSEE---EETTTSCHHH-------HCC-SC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HHHHHHc---CCCEE---EeCCCcchhh-------hhc-cC
Confidence            68999999999999999999998999999988754 33 3333333   43322   2444433211       111 35


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.+.|.
T Consensus       216 ~D~v~d~~g~  225 (321)
T 3tqh_A          216 VDAVIDLVGG  225 (321)
T ss_dssp             EEEEEESSCH
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.60  E-value=0.0094  Score=51.01  Aligned_cols=102  Identities=16%  Similarity=0.147  Sum_probs=63.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|+|+ +++|...+..+... |++|+.+++++++++...    +.|....+   |-.+  +..+.+.+...  +.
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~----~lGa~~~i---~~~~--~~~~~v~~~t~--g~  238 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR----EVGADAAV---KSGA--GAADAIRELTG--GQ  238 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH----HTTCSEEE---ECST--THHHHHHHHHG--GG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCCEEE---cCCC--cHHHHHHHHhC--CC
Confidence            5899999998 99999887766666 789999999988765432    33433322   2222  22222222222  12


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                      .+|+++.++|..          +               ..+.++..++.  .|+++.++...
T Consensus       239 g~d~v~d~~G~~----------~---------------~~~~~~~~l~~--~G~iv~~G~~~  273 (345)
T 3jv7_A          239 GATAVFDFVGAQ----------S---------------TIDTAQQVVAV--DGHISVVGIHA  273 (345)
T ss_dssp             CEEEEEESSCCH----------H---------------HHHHHHHHEEE--EEEEEECSCCT
T ss_pred             CCeEEEECCCCH----------H---------------HHHHHHHHHhc--CCEEEEECCCC
Confidence            699999999852          1               23334555544  47999887544

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.58  E-value=0.01  Score=50.45  Aligned_cols=89  Identities=11%  Similarity=0.101  Sum_probs=59.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH-------HHhcCCeeEEEeccCCCHHHHHHHHH-
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-------WESKGFKVTGSVCDLSFGDQREKLIE-   87 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~D~~~~~~i~~~~~-   87 (266)
                      .+.+++.|.|+ |.+|..+++.|++.|++|++.+|++++.+++.+.       +.+.-....++..-+.+...++.++. 
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~  107 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA  107 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence            45568888876 8899999999999999999999999887766432       11111123344455566677777775 


Q ss_pred             -HHHhhcCCcccEEEecccc
Q 024551           88 -TVSSVFDGKLNILVNNAAL  106 (266)
Q Consensus        88 -~~~~~~~~~id~lv~~ag~  106 (266)
                       .+.+.. .+=.++|++...
T Consensus       108 ~~~~~~l-~~~~~vi~~st~  126 (320)
T 4dll_A          108 QGVAAAM-KPGSLFLDMASI  126 (320)
T ss_dssp             TCHHHHC-CTTCEEEECSCC
T ss_pred             hhHHhhC-CCCCEEEecCCC
Confidence             555544 333566665543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.53  E-value=0.017  Score=47.36  Aligned_cols=87  Identities=15%  Similarity=0.171  Sum_probs=57.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHH--------hcCCeeEEEeccCCCHHHHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWE--------SKGFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~--------~~~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ++++.|.|+ |.+|..++..|++.|++ |.+++|+++..+++.+.+.        +.-..+.++..-+. +..+.+++++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~-~~~~~~v~~~   87 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLK-DSAFAELLQG   87 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCC-HHHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecC-HHHHHHHHHH
Confidence            457888997 89999999999999999 8899999998877766531        10011222222222 3456777877


Q ss_pred             HHhhcCCcccEEEeccccc
Q 024551           89 VSSVFDGKLNILVNNAALV  107 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~  107 (266)
                      +.+.. .+=.+++++....
T Consensus        88 l~~~~-~~~~ivv~~s~~~  105 (266)
T 3d1l_A           88 IVEGK-REEALMVHTAGSI  105 (266)
T ss_dssp             HHTTC-CTTCEEEECCTTS
T ss_pred             HHhhc-CCCcEEEECCCCC
Confidence            76644 2234677776544

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.50  E-value=0.049  Score=45.63  Aligned_cols=40  Identities=20%  Similarity=0.287  Sum_probs=35.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERI   59 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~   59 (266)
                      +++.|.|+ |.+|.++|..|++.|++|++++|+++.++...
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            67889998 88999999999999999999999998877643

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.47  E-value=0.0056  Score=54.61  Aligned_cols=82  Identities=21%  Similarity=0.184  Sum_probs=56.2

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ..+++++|.++|.|. ++.|.++|+.|.++|++|.+.+++........+.|.+.|..+.  .-.-  +++          
T Consensus         3 ~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~--~g~~--~~~----------   67 (451)
T 3lk7_A            3 TITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV--CGSH--PLE----------   67 (451)
T ss_dssp             -CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE--ESCC--CGG----------
T ss_pred             chhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE--ECCC--hHH----------
Confidence            345688999999999 7889999999999999999999865432334456666655443  1111  110          


Q ss_pred             hcCCcccEEEecccccc
Q 024551           92 VFDGKLNILVNNAALVV  108 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~  108 (266)
                      .+.+..|.+|.++|+..
T Consensus        68 ~~~~~~d~vv~spgi~~   84 (451)
T 3lk7_A           68 LLDEDFCYMIKNPGIPY   84 (451)
T ss_dssp             GGGSCEEEEEECTTSCT
T ss_pred             hhcCCCCEEEECCcCCC
Confidence            11123899999999853

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.46  E-value=0.0079  Score=53.03  Aligned_cols=60  Identities=20%  Similarity=0.150  Sum_probs=45.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~   84 (266)
                      +..++|.|. |.+|+.+++.|.++|..|++++++++..+.+.+    .+  +.++..|.++++.+++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g--~~vi~GDat~~~~L~~   63 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG--MKVFYGDATRMDLLES   63 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT--CCCEESCTTCHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC--CeEEEcCCCCHHHHHh
Confidence            346888887 779999999999999999999999988765542    22  3345667776665443

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.42  E-value=0.043  Score=46.71  Aligned_cols=116  Identities=7%  Similarity=-0.037  Sum_probs=71.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      -+.+++.|+|+ |.+|.+++..|+.++.  .++++++++++++..+.++.+..   ..+.+. .|  +.+.         
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a---------   73 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD---------   73 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH---------
Confidence            34568999999 9999999999998885  69999999988887777765531   222222 11  2111         


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh-cCCCeEEEEecCC
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA-SGNASIVFMSSVA  157 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~vss~~  157 (266)
                        + ..-|++|..+|.....   ..+..   +.+..|..-    .+.+.+.+.+ ..++.|+++|...
T Consensus        74 --~-~~aDvVii~ag~~~k~---g~~R~---dl~~~n~~i----~~~i~~~i~~~~p~a~iiv~tNPv  128 (326)
T 2zqz_A           74 --A-KDADLVVITAGAPQKP---GETRL---DLVNKNLKI----LKSIVDPIVDSGFNGIFLVAANPV  128 (326)
T ss_dssp             --G-GGCSEEEECCCCC--------CHH---HHHHHHHHH----HHHHHHHHHHHTCCSEEEECSSSH
T ss_pred             --h-CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHHHHCCCeEEEEeCCcH
Confidence              2 3579999999975321   12222   234444443    3444444443 3467888876544

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.41  E-value=0.0027  Score=52.85  Aligned_cols=72  Identities=21%  Similarity=0.318  Sum_probs=52.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++++|+++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+++   +  +..  .+  +.+          +.. 
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g--~~~--~~--~~~----------~~~-  184 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---P--LEV--VN--SPE----------EVI-  184 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---C--EEE--CS--CGG----------GTG-
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---C--Cee--eh--hHH----------hhh-
Confidence            577899999997 79999999999999999999999988776655432   2  221  11  111          111 


Q ss_pred             CcccEEEeccccc
Q 024551           95 GKLNILVNNAALV  107 (266)
Q Consensus        95 ~~id~lv~~ag~~  107 (266)
                      ...|++|++.+..
T Consensus       185 ~~aDiVi~atp~~  197 (275)
T 2hk9_A          185 DKVQVIVNTTSVG  197 (275)
T ss_dssp             GGCSEEEECSSTT
T ss_pred             cCCCEEEEeCCCC
Confidence            3579999998854

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.41  E-value=0.012  Score=49.34  Aligned_cols=85  Identities=5%  Similarity=0.012  Sum_probs=60.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH-------HHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-------WESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +++.|.|. |.+|..+++.|++.|++|++.+|++++.+++.+.       +.+.-. ..++..-+.+...++++++.+.+
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            46777774 7899999999999999999999999887766542       111112 44555666777788888887776


Q ss_pred             hcCCcccEEEecccc
Q 024551           92 VFDGKLNILVNNAAL  106 (266)
Q Consensus        92 ~~~~~id~lv~~ag~  106 (266)
                      .. .+=.++|++...
T Consensus        94 ~l-~~g~ivv~~st~  107 (296)
T 3qha_A           94 HA-KPGTVIAIHSTI  107 (296)
T ss_dssp             TC-CTTCEEEECSCC
T ss_pred             hc-CCCCEEEEeCCC
Confidence            55 334566666543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.39  E-value=0.0039  Score=51.80  Aligned_cols=40  Identities=25%  Similarity=0.431  Sum_probs=36.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .+++||+++|.|.++-+|+.++..|..+|++|.++.|+..
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~  195 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch
Confidence            5689999999999999999999999999999999887543

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.36  E-value=0.026  Score=46.93  Aligned_cols=84  Identities=13%  Similarity=0.065  Sum_probs=58.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCC---eEEEecCChhHHHHHHHHHH--------h--cCCeeEEEeccCCCHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGA---SVHTCGRDQNMINERIQEWE--------S--KGFKVTGSVCDLSFGDQREK   84 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~---~v~~~~r~~~~~~~~~~~l~--------~--~~~~~~~~~~D~~~~~~i~~   84 (266)
                      .+++.|.|+ |.+|.++++.|++.|+   +|++++|++++++++.+.+.        +  ....+.++.+   .++.+++
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            367888888 8899999999999998   89999999998887766421        0  0123333333   3567788


Q ss_pred             HHHHHHhh-cCCcccEEEecccc
Q 024551           85 LIETVSSV-FDGKLNILVNNAAL  106 (266)
Q Consensus        85 ~~~~~~~~-~~~~id~lv~~ag~  106 (266)
                      +++++... . .+=.++|++++.
T Consensus        79 vl~~l~~~~l-~~~~iiiS~~ag  100 (280)
T 3tri_A           79 VCEELKDILS-ETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHH-TTTCEEEECCTT
T ss_pred             HHHHHHhhcc-CCCeEEEEecCC
Confidence            88888765 5 222377776554

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.35  E-value=0.032  Score=47.41  Aligned_cols=115  Identities=11%  Similarity=0.078  Sum_probs=70.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+++.|+|+ |.+|.+++..|+.+|. .|+++++++++++....++.+.    +....+...  .|.+           .
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~-----------a   70 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK-----------D   70 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH-----------H
Confidence            467888895 9999999999999988 8999999998877666666542    112222111  1211           1


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                      + ..-|++|..+|.....   ..+..+   .+..|..-.-.+    .+.+.+. ..+.+++++...
T Consensus        71 ~-~~aDvVIi~ag~p~k~---G~~R~d---l~~~N~~i~~~i----~~~i~~~~p~a~vivvtNPv  125 (321)
T 3p7m_A           71 L-ENSDVVIVTAGVPRKP---GMSRDD---LLGINIKVMQTV----GEGIKHNCPNAFVICITNPL  125 (321)
T ss_dssp             G-TTCSEEEECCSCCCCT---TCCHHH---HHHHHHHHHHHH----HHHHHHHCTTCEEEECCSSH
T ss_pred             H-CCCCEEEEcCCcCCCC---CCCHHH---HHHHhHHHHHHH----HHHHHHHCCCcEEEEecCch
Confidence            2 3479999999975321   123333   344455444444    4444443 356777776543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.33  E-value=0.012  Score=50.84  Aligned_cols=87  Identities=13%  Similarity=0.163  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH----------HHhcCCeeEEEeccCCCHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE----------WESKGFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~----------l~~~~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      +.+++.|.| .+.+|..+|+.|++.|++|++++|++++.+++.+.          +-+......++..-+.+. .+++++
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl   98 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML   98 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence            357888888 58899999999999999999999999887665431          111110112333333333 667777


Q ss_pred             HHHHhhcCCcccEEEecccc
Q 024551           87 ETVSSVFDGKLNILVNNAAL  106 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~  106 (266)
                      +.+.... .+=+++|.+...
T Consensus        99 ~~l~~~l-~~g~iiId~st~  117 (358)
T 4e21_A           99 QRMTPLL-AANDIVIDGGNS  117 (358)
T ss_dssp             HHHGGGC-CTTCEEEECSSC
T ss_pred             HHHHhhC-CCCCEEEeCCCC
Confidence            7776654 333566665543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.33  E-value=0.012  Score=49.12  Aligned_cols=85  Identities=16%  Similarity=0.027  Sum_probs=57.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH-------HHhcCCeeEEEeccCCCHHHHHHHH---HH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-------WESKGFKVTGSVCDLSFGDQREKLI---ET   88 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~D~~~~~~i~~~~---~~   88 (266)
                      +++.|.|+ |.+|.++++.|++.|++|++.+|++++.+++.+.       +.+.-....++..-+.++..++.++   +.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            56788886 8899999999999999999999999887766542       1110012334445566677777777   66


Q ss_pred             HHhhcCCcccEEEeccc
Q 024551           89 VSSVFDGKLNILVNNAA  105 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag  105 (266)
                      +.+.. .+=.++|++..
T Consensus        81 l~~~l-~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGI-GEGRGYVDMST   96 (287)
T ss_dssp             HHHHC-CTTCEEEECSC
T ss_pred             HhhcC-CCCCEEEeCCC
Confidence            65554 23356666644

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=96.33  E-value=0.0014  Score=57.65  Aligned_cols=47  Identities=23%  Similarity=0.334  Sum_probs=39.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEE-EecC----------ChhHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGR----------DQNMINERIQE   61 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~-~~~r----------~~~~~~~~~~~   61 (266)
                      .+++||+++|.| .+.+|+.+++.|.+.|++|+ +.++          +.+.+.+++++
T Consensus       214 ~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          214 LDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            368999999998 78899999999999999998 7777          66777666665

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.27  E-value=0.017  Score=52.98  Aligned_cols=90  Identities=10%  Similarity=0.130  Sum_probs=58.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh-------------------hHHHHHHHHHHhcCC--eeEEE
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ-------------------NMINERIQEWESKGF--KVTGS   72 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~-------------------~~~~~~~~~l~~~~~--~~~~~   72 (266)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++++.                   .+.+..++.+.+...  ++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            468899999998 68999999999999965 77877754                   456777777776544  45555


Q ss_pred             eccC-------CCHHHHHHHHHHHHhhcCCcccEEEecccc
Q 024551           73 VCDL-------SFGDQREKLIETVSSVFDGKLNILVNNAAL  106 (266)
Q Consensus        73 ~~D~-------~~~~~i~~~~~~~~~~~~~~id~lv~~ag~  106 (266)
                      ..++       ++++...--.+.+.+.+ ...|+||.+..-
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll-~~~DlVvd~tDn  441 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVDS  441 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHH-HHCSEEEECCSS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHh-hcCCEEEecCCC
Confidence            4444       22221111112222223 357999988763

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.26  E-value=0.0082  Score=50.69  Aligned_cols=68  Identities=13%  Similarity=0.058  Sum_probs=46.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|+|+ |++|...+..+...|++|+.++ ++++.+.+ +++   |... ++  |  |.+.       +    ++.
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~l---Ga~~-v~--~--d~~~-------v----~~g  199 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKR---GVRH-LY--R--EPSQ-------V----TQK  199 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHH---TEEE-EE--S--SGGG-------C----CSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHc---CCCE-EE--c--CHHH-------h----CCC
Confidence            5899999999 9999998888888899999998 76665443 333   4332 22  2  2111       1    367


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.++|.
T Consensus       200 ~Dvv~d~~g~  209 (315)
T 3goh_A          200 YFAIFDAVNS  209 (315)
T ss_dssp             EEEEECC---
T ss_pred             ccEEEECCCc
Confidence            9999999985

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.25  E-value=0.0085  Score=49.34  Aligned_cols=70  Identities=24%  Similarity=0.301  Sum_probs=53.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++| +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+++.   ..       ..+.++       +    
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~---~~-------~~~~~~-------~----  169 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG---LR-------AVPLEK-------A----  169 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT---CE-------ECCGGG-------G----
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---cc-------hhhHhh-------c----
Confidence            35788 9999997 779999999999999999999999988877776652   21       112211       1    


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                       ...|++|++.+..
T Consensus       170 -~~~Divi~~tp~~  182 (263)
T 2d5c_A          170 -REARLLVNATRVG  182 (263)
T ss_dssp             -GGCSEEEECSSTT
T ss_pred             -cCCCEEEEccCCC
Confidence             2479999998864

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.22  E-value=0.029  Score=46.55  Aligned_cols=164  Identities=9%  Similarity=0.095  Sum_probs=94.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHH-CCCeEE-EecCChhHH--HH-----------------HHHHHHhcCCeeEEEeccCC
Q 024551           19 MTALVTGGTRGIGYAIVEELAR-FGASVH-TCGRDQNMI--NE-----------------RIQEWESKGFKVTGSVCDLS   77 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~-~G~~v~-~~~r~~~~~--~~-----------------~~~~l~~~~~~~~~~~~D~~   77 (266)
                      .+++|+|++|.+|+.+++.+.+ .|+.|+ +++++++..  ++                 +.+.+ + ...+   ..|++
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l-~-~~Dv---VIDft   80 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK-D-DFDV---FIDFT   80 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT-T-SCSE---EEECS
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHh-c-CCCE---EEEcC
Confidence            4799999999999999999875 577766 556654320  00                 00111 1 1222   35899


Q ss_pred             CHHHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHH-------hccchhh----HHHHHHHHHHHHHhcC
Q 024551           78 FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSV-------MSTNVES----SYHLCQLAHPLLKASG  146 (266)
Q Consensus        78 ~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~-------~~~n~~~----~~~l~~~~~~~m~~~~  146 (266)
                      .++.....+..+.+.   .+++++-..|....      ..+.+.+.       +-.|+--    .+.+++.+.++|...-
T Consensus        81 ~p~~~~~~~~~a~~~---G~~vVigTtG~~~e------~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~~~  151 (273)
T 1dih_A           81 RPEGTLNHLAFCRQH---GKGMVIGTTGFDEA------GKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYT  151 (273)
T ss_dssp             CHHHHHHHHHHHHHT---TCEEEECCCCCCHH------HHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHTTTS
T ss_pred             ChHHHHHHHHHHHhC---CCCEEEECCCCCHH------HHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcCCCC
Confidence            999988888888775   37888877764311      12222221       2222222    3344555555554211


Q ss_pred             CCeEEEEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhc---------------cCCcEEEEEecCcc
Q 024551          147 NASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA---------------TDSIRVNAVSPWAV  201 (266)
Q Consensus       147 ~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~---------------~~gi~v~~i~PG~v  201 (266)
                      .--|+-     .+....-..+|+.++...+.+.+.+...+.               ..+|.|.++.-|-+
T Consensus       152 dieiiE-----~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~v  216 (273)
T 1dih_A          152 DIEIIE-----AHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDI  216 (273)
T ss_dssp             EEEEEE-----EECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTC
T ss_pred             CEEEEE-----eecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCC
Confidence            111221     134445567889999888888776654321               34688888875544

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.22  E-value=0.01  Score=49.88  Aligned_cols=73  Identities=19%  Similarity=0.295  Sum_probs=52.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ..+.||+++|.|+ |++|+++++.|...|++|++++|+.++.+...+    .+..  .+.     ..+++++       .
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g~~--~~~-----~~~l~~~-------l  213 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE----MGLV--PFH-----TDELKEH-------V  213 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCE--EEE-----GGGHHHH-------S
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCCe--EEc-----hhhHHHH-------h
Confidence            4689999999997 899999999999999999999999876554332    2322  211     1222222       2


Q ss_pred             CCcccEEEecccc
Q 024551           94 DGKLNILVNNAAL  106 (266)
Q Consensus        94 ~~~id~lv~~ag~  106 (266)
                       ...|+++++.+.
T Consensus       214 -~~aDvVi~~~p~  225 (300)
T 2rir_A          214 -KDIDICINTIPS  225 (300)
T ss_dssp             -TTCSEEEECCSS
T ss_pred             -hCCCEEEECCCh
Confidence             357999999874

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.20  E-value=0.0076  Score=53.94  Aligned_cols=74  Identities=15%  Similarity=0.197  Sum_probs=56.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +.++|.|+ |.+|+.+|+.|.++|+.|++++++++.++.+.+.+     .+.++..|.++++-++++=-       ...|
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi-------~~ad   70 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA-------QDAD   70 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT-------TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC-------CcCC
Confidence            46788887 67999999999999999999999999888776654     45677888888877655421       3467


Q ss_pred             EEEeccc
Q 024551           99 ILVNNAA  105 (266)
Q Consensus        99 ~lv~~ag  105 (266)
                      ++|-..+
T Consensus        71 ~~ia~t~   77 (461)
T 4g65_A           71 MLVAVTN   77 (461)
T ss_dssp             EEEECCS
T ss_pred             EEEEEcC
Confidence            7765443

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.20  E-value=0.034  Score=47.37  Aligned_cols=115  Identities=12%  Similarity=0.039  Sum_probs=71.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC---CeeEEE-eccCCCHHHHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG---FKVTGS-VCDLSFGDQREKLIETVS   90 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~-~~D~~~~~~i~~~~~~~~   90 (266)
                      ..+++.|+|+ |.+|..++..|+.+|.  .|++++++++.++..+.++.+..   ...... ..|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            4578999999 9999999999999997  79999999988877766665431   111111 122211            


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh-cCCCeEEEEecCC
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA-SGNASIVFMSSVA  157 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~vss~~  157 (266)
                        + ...|++|..+|......   .+..   +.+..|..-    .+.+.+.+.+ ..++.++++|...
T Consensus        87 --~-~daDiVIitaG~p~kpG---~tR~---dll~~N~~I----~k~i~~~I~k~~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 --S-AGSKLVVITAGARQQEG---ESRL---NLVQRNVNI----FKFIIPNIVKHSPDCLKELHPELG  141 (330)
T ss_dssp             --C-SSCSEEEECCSCCCCSS---CCTT---GGGHHHHHH----HHHHHHHHHHHCTTCEEEECSSSH
T ss_pred             --h-CCCCEEEEeCCCCCCCC---CCHH---HHHHhhHHH----HHHHHHHHHhhCCCceEEeCCCcc
Confidence              2 45899999999753211   1111   234444433    3333444443 3456777777643

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.19  E-value=0.0086  Score=49.50  Aligned_cols=37  Identities=14%  Similarity=0.163  Sum_probs=34.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      ++||+++|.|.+.-+|+.+|+.|..+|++|.++.++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            8999999999999999999999999999999987754

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.16  E-value=0.003  Score=53.52  Aligned_cols=82  Identities=15%  Similarity=0.078  Sum_probs=54.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeE-EEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT-GSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++||+++|.|++.-+|+.+|+.|+..|++|.++.|+..++.+..+++.   ...+ ......++++++.+.+.      
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~------  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK---LNKHHVEDLGEYSEDLLKKCSL------  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS---CCCCEEEEEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh---hhcccccccccccHhHHHHHhc------
Confidence            6899999999999889999999999999999999887543222112111   1111 11111133455555444      


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                        .-|++|.+.|..
T Consensus       245 --~ADIVIsAtg~p  256 (320)
T 1edz_A          245 --DSDVVITGVPSE  256 (320)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --cCCEEEECCCCC
Confidence              469999999864

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.15  E-value=0.045  Score=46.05  Aligned_cols=72  Identities=11%  Similarity=0.057  Sum_probs=48.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++.|+|+ |.+|..++..|+.+|.  .|+++++++++++....++....   ....+. .  .+.+           .+ 
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~~~-----------a~-   65 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GGHS-----------EL-   65 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--ECGG-----------GG-
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CCHH-----------Hh-
Confidence            6889998 9999999999999998  89999999987765555554321   111111 1  1211           12 


Q ss_pred             CcccEEEeccccc
Q 024551           95 GKLNILVNNAALV  107 (266)
Q Consensus        95 ~~id~lv~~ag~~  107 (266)
                      ...|++|.++|..
T Consensus        66 ~~aDvVIi~~~~~   78 (304)
T 2v6b_A           66 ADAQVVILTAGAN   78 (304)
T ss_dssp             TTCSEEEECC---
T ss_pred             CCCCEEEEcCCCC
Confidence            3589999999864

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.14  E-value=0.14  Score=42.75  Aligned_cols=113  Identities=8%  Similarity=-0.049  Sum_probs=69.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++.|+|+ |.+|.+++..|+..|.  .|++.+++++.++....++...    .....+...  +|.+.           +
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH-----------h
Confidence            5789999 9999999999999997  8999999998876433333321    112222111  12211           1


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                       ..-|++|..+|.....   ..+..+   .++.|.    -+.+.+.+.+.+. .++.++++|...
T Consensus        68 -~~aDiVViaag~~~kp---G~~R~d---l~~~N~----~i~~~i~~~i~~~~p~a~iivvsNPv  121 (294)
T 1oju_A           68 -KGSEIIVVTAGLARKP---GMTRLD---LAHKNA----GIIKDIAKKIVENAPESKILVVTNPM  121 (294)
T ss_dssp             -TTCSEEEECCCCCCCS---SCCHHH---HHHHHH----HHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred             -CCCCEEEECCCCCCCC---CCcHHH---HHHHHH----HHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence             3479999999975321   223333   355554    3444455555554 356777777643

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=96.12  E-value=0.019  Score=45.82  Aligned_cols=79  Identities=11%  Similarity=0.104  Sum_probs=57.4

Q ss_pred             CCCEEEEecCC-Cc-hHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGT-RG-IGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas-~g-iG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .++++|=.|++ +| ++..+++.+   +.+|+.++.++..++...+.+...+.++.++..|+.+.....          .
T Consensus        55 ~~~~vLDlG~G~~G~~~~~la~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~----------~  121 (230)
T 3evz_A           55 GGEVALEIGTGHTAMMALMAEKFF---NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVV----------E  121 (230)
T ss_dssp             SSCEEEEECCTTTCHHHHHHHHHH---CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTC----------C
T ss_pred             CCCEEEEcCCCHHHHHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcc----------c
Confidence            57888888876 55 444444433   789999999999998888888777668999999975432211          1


Q ss_pred             CcccEEEecccccc
Q 024551           95 GKLNILVNNAALVV  108 (266)
Q Consensus        95 ~~id~lv~~ag~~~  108 (266)
                      +++|+++.|.....
T Consensus       122 ~~fD~I~~npp~~~  135 (230)
T 3evz_A          122 GTFDVIFSAPPYYD  135 (230)
T ss_dssp             SCEEEEEECCCCC-
T ss_pred             CceeEEEECCCCcC
Confidence            57999999877654

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.09  E-value=0.012  Score=48.88  Aligned_cols=45  Identities=16%  Similarity=0.249  Sum_probs=40.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l   62 (266)
                      .+|+++|.|+ ||.|++++.+|++.|+ +|.++.|+.++.+++++++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            5789999996 7899999999999997 6999999999988888776

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.09  E-value=0.0086  Score=49.75  Aligned_cols=39  Identities=31%  Similarity=0.335  Sum_probs=35.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .+++||+++|.|.++-+|+.++..|..+|++|.++.+..
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            568999999999999999999999999999999887644

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.05  E-value=0.027  Score=47.80  Aligned_cols=113  Identities=11%  Similarity=-0.047  Sum_probs=65.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCC---eeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGF---KVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++.|+|+ |.+|..++..|+.+|.  .|++++.++++++....++.+...   .+.+. .  .+           .+.+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~-----------~~a~   72 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD-----------YSDV   72 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC-----------HHHh
Confidence            57888898 9999999999999987  799999998877665666644321   12111 1  11           1112


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSV  156 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~  156 (266)
                       ..-|++|.++|.....   ..+..   +.+..|+.-...+.+.+.++   ..++.|+++|..
T Consensus        73 -~~aDvVii~~g~p~k~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNP  125 (318)
T 1y6j_A           73 -KDCDVIVVTAGANRKP---GETRL---DLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNP  125 (318)
T ss_dssp             -TTCSEEEECCCC---------CHH---HHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSS
T ss_pred             -CCCCEEEEcCCCCCCC---CcCHH---HHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCc
Confidence             4589999999975321   11222   34555555444554444332   345677776543

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.04  E-value=0.16  Score=39.82  Aligned_cols=75  Identities=13%  Similarity=0.109  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC--eeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF--KVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .++++|-.|++.|.   ++..+++.+.+|+.++.+++.++...+.+...+.  ++.++..|+.+.-          ... 
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------~~~-  120 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL----------ADL-  120 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG----------TTS-
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc----------ccC-
Confidence            57899999987763   4556666699999999999999888887766653  6899999987521          112 


Q ss_pred             CcccEEEeccc
Q 024551           95 GKLNILVNNAA  105 (266)
Q Consensus        95 ~~id~lv~~ag  105 (266)
                      ..+|+++.+.+
T Consensus       121 ~~~D~v~~~~~  131 (204)
T 3njr_A          121 PLPEAVFIGGG  131 (204)
T ss_dssp             CCCSEEEECSC
T ss_pred             CCCCEEEECCc
Confidence            46899997653

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.04  E-value=0.0052  Score=52.28  Aligned_cols=75  Identities=19%  Similarity=0.128  Sum_probs=49.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      +++|+||++++|..++..+...|++|+.+++++++++... ++   |....+   |..+.+  .   +.+.+..++.+|+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~~v~---~~~~~~--~---~~~~~~~~~~~d~  220 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL---GASEVI---SREDVY--D---GTLKALSKQQWQG  220 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH---TCSEEE---EHHHHC--S---SCCCSSCCCCEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcEEE---ECCCch--H---HHHHHhhcCCccE
Confidence            7999999999999999988889999999999887765443 33   332211   211110  0   0111111246999


Q ss_pred             EEecccc
Q 024551          100 LVNNAAL  106 (266)
Q Consensus       100 lv~~ag~  106 (266)
                      +|.++|.
T Consensus       221 vid~~g~  227 (330)
T 1tt7_A          221 AVDPVGG  227 (330)
T ss_dssp             EEESCCT
T ss_pred             EEECCcH
Confidence            9999983

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.02  E-value=0.012  Score=49.34  Aligned_cols=39  Identities=21%  Similarity=0.261  Sum_probs=35.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .+++||.++|.|.++-+|+.++..|..+|++|.++.|..
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            568999999999999999999999999999999988744

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.02  E-value=0.088  Score=44.58  Aligned_cols=113  Identities=9%  Similarity=0.004  Sum_probs=69.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++.|+|+ |.+|.+++..|+.++.  .++++++++++++..+.++.+..   ..+.+. .|  +.           +.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~-----------~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EY-----------SDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CG-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CH-----------HHh
Confidence            57999999 9999999999999885  79999999988887777775532   222222 11  21           112


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                       ..-|++|..+|.....   ..+..   +.+..|.    -+.+.+.+.+.+. .++.|+++|...
T Consensus        71 -~~aDvVii~ag~~~~~---g~~R~---dl~~~n~----~i~~~i~~~i~~~~p~a~iiv~tNPv  124 (318)
T 1ez4_A           71 -KDADLVVITAGAPQKP---GESRL---DLVNKNL----NILSSIVKPVVDSGFDGIFLVAANPV  124 (318)
T ss_dssp             -TTCSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred             -CCCCEEEECCCCCCCC---CCCHH---HHHHHHH----HHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence             4589999999975321   01111   2233333    3444455555544 467788776544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.02  E-value=0.015  Score=48.77  Aligned_cols=43  Identities=21%  Similarity=0.500  Sum_probs=38.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE   57 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~   57 (266)
                      ..+.||+++|.|+ |+||+++++.+...|++|++++|+.++.+.
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            3688999999995 899999999999999999999999876543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.01  E-value=0.085  Score=44.64  Aligned_cols=115  Identities=11%  Similarity=0.068  Sum_probs=69.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +..++.|+|+ |.+|.+++..|+.+|.  .|+++++++++++..+.++.+.    +..+.+. .|  +.+          
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~----------   70 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYS----------   70 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHH----------
Confidence            3468999999 9999999999999884  7999999988777655555432    1222222 11  211          


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                       .+ ..-|++|..+|.....   ..+..   ..+..|..    +.+.+.+.+.+. .++.|+++|...
T Consensus        71 -a~-~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~viv~tNPv  126 (317)
T 3d0o_A           71 -DC-HDADLVVICAGAAQKP---GETRL---DLVSKNLK----IFKSIVGEVMASKFDGIFLVATNPV  126 (317)
T ss_dssp             -GG-TTCSEEEECCCCCCCT---TCCHH---HHHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred             -Hh-CCCCEEEECCCCCCCC---CCcHH---HHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCcH
Confidence             12 3589999999975321   12322   23444443    334444444443 356777765433

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.01  E-value=0.067  Score=45.09  Aligned_cols=75  Identities=11%  Similarity=0.034  Sum_probs=50.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +++.|+|+ |.+|..++..|+..|. +|+++++++++++....++.+.    .....+...  +|.+.           +
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHHH-----------H
Confidence            57899999 9999999999999996 8999999988877655555442    111111110  12111           2


Q ss_pred             CCcccEEEecccccc
Q 024551           94 DGKLNILVNNAALVV  108 (266)
Q Consensus        94 ~~~id~lv~~ag~~~  108 (266)
                       ...|++|.++|...
T Consensus        69 -~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           69 -ANSDVIVVTSGAPR   82 (309)
T ss_dssp             -TTCSEEEECCCC--
T ss_pred             -CCCCEEEEcCCCCC
Confidence             35899999999753

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.99  E-value=0.14  Score=46.48  Aligned_cols=150  Identities=11%  Similarity=0.015  Sum_probs=89.7

Q ss_pred             cCCCCEEEEecCCC-chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTR-GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~-giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ...|.+.++..... +++..++..|.++|.+|+.+.-...                       .|.+...+.+.+.....
T Consensus        47 ~~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~-----------------------~~~~~~~~~l~~~~~~~  103 (525)
T 3qp9_A           47 GLSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPL-----------------------GDRQRLAATLGEALAAA  103 (525)
T ss_dssp             CCCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTT-----------------------CCHHHHHHHHHHHHHHT
T ss_pred             CCCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCC-----------------------CCHHHHHHHHHhhhhcc
Confidence            34566766665443 2888999999999999876643221                       05555555555333222


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhc-cchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMS-TNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~-~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      .+.++.+++..+......... .      ... ..+.+.+.++|++..   .....++..++..+.... +....-...+
T Consensus       104 ~~~~~~v~~l~~~~~~~~~~~-~------~~~~~g~~~~l~l~qal~~---~~~~~~l~~vT~ga~~~~-~~~~~~~p~~  172 (525)
T 3qp9_A          104 GGAVDGVLSLLAWDESAHPGH-P------APFTRGTGATLTLVQALED---AGVAAPLWCVTHGAVSVG-RADHVTSPAQ  172 (525)
T ss_dssp             TSCCSEEEECGGGCCCBCTTS-C------TTCBHHHHHHHHHHHHHHH---TTCCSCEEEEEESCCCCB-TTBCCSCHHH
T ss_pred             cCCCCeEEEcccCCCCccccc-c------ccccchHHHHHHHHHHHHh---cCCCCcEEEEECCCEeCC-CCCCCCCHHH
Confidence            267889999877542211110 0      111 345677778777643   222467777776543221 1122336778


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEec
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSP  198 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~P  198 (266)
                      +++-+|.|+++.|+.....+...+.+
T Consensus       173 a~l~Gl~r~~~~E~p~~~~~~vDl~~  198 (525)
T 3qp9_A          173 AMVWGMGRVAALEHPERWGGLIDLPS  198 (525)
T ss_dssp             HHHHHHHHHHHHHSTTTEEEEEEECS
T ss_pred             HHHHHHHHHHHHhCCCceEEEEEcCC
Confidence            99999999999998875555555543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.97  E-value=0.04  Score=47.02  Aligned_cols=78  Identities=17%  Similarity=0.171  Sum_probs=48.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-C
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-D   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~   94 (266)
                      .|++++|+|+ +++|...+..++.. |++|+.+++++++++..    .+.+....+   |-++.+..++    +.+.. +
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~----~~~Ga~~~i---~~~~~~~~~~----v~~~t~g  230 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA----KKIGADVTI---NSGDVNPVDE----IKKITGG  230 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH----HHTTCSEEE---EC-CCCHHHH----HHHHTTS
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhh----hhcCCeEEE---eCCCCCHHHH----hhhhcCC
Confidence            5889999988 67777767666654 78999999998875432    233443332   4444333332    33322 2


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      ..+|.++.+++.
T Consensus       231 ~g~d~~~~~~~~  242 (348)
T 4eez_A          231 LGVQSAIVCAVA  242 (348)
T ss_dssp             SCEEEEEECCSC
T ss_pred             CCceEEEEeccC
Confidence            358889888874

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.95  E-value=0.075  Score=44.94  Aligned_cols=113  Identities=13%  Similarity=0.135  Sum_probs=67.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++.|+|+ |.+|.+++..|+.+|.  .|+++++++++++-.+.++.+.    +....+...|  +.           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-----------HHh
Confidence            5788997 9999999999999986  7999999998876555555432    1122222111  11           122


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVA  157 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~  157 (266)
                       ..-|++|.++|.....   .   +.-.+.++.|..-    .+.+.+.+.+. +++.++++|...
T Consensus        68 -~~aDvVii~ag~~~kp---G---~~R~dl~~~N~~i----~~~i~~~i~~~~p~a~vivvtNPv  121 (314)
T 3nep_X           68 -EDSDVCIITAGLPRSP---G---MSRDDLLAKNTEI----VGGVTEQFVEGSPDSTIIVVANPL  121 (314)
T ss_dssp             -TTCSEEEECCCC-------------CHHHHHHHHHH----HHHHHHHHHTTCTTCEEEECCSSH
T ss_pred             -CCCCEEEECCCCCCCC---C---CCHHHHHHhhHHH----HHHHHHHHHHhCCCcEEEecCCch
Confidence             3589999999975321   1   1122335555543    44445555544 356777777543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.93  E-value=0.0093  Score=49.55  Aligned_cols=39  Identities=28%  Similarity=0.369  Sum_probs=35.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .+++||.++|.|.++-+|+.++..|..+|++|.++.|+.
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  195 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            468999999999999999999999999999999887643

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.93  E-value=0.022  Score=52.16  Aligned_cols=62  Identities=11%  Similarity=0.161  Sum_probs=46.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCC-------------------hhHHHHHHHHHHhcC--CeeEE
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRD-------------------QNMINERIQEWESKG--FKVTG   71 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~-------------------~~~~~~~~~~l~~~~--~~~~~   71 (266)
                      ..+++++|+|.|+ ||+|.++++.|+..|.. +.+++.+                   ..+.+.+++.+++..  .++..
T Consensus       323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~  401 (598)
T 3vh1_A          323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  401 (598)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEE
Confidence            3577899999998 68999999999999975 7777543                   246777788887754  34555


Q ss_pred             EeccC
Q 024551           72 SVCDL   76 (266)
Q Consensus        72 ~~~D~   76 (266)
                      +..++
T Consensus       402 ~~~~I  406 (598)
T 3vh1_A          402 VKLSI  406 (598)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            55544

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.92  E-value=0.085  Score=45.19  Aligned_cols=120  Identities=17%  Similarity=0.174  Sum_probs=69.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-------eEEEecCChh--HHHHHHHHHHhcC--CeeEEEeccCCCHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-------SVHTCGRDQN--MINERIQEWESKG--FKVTGSVCDLSFGDQR   82 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-------~v~~~~r~~~--~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i   82 (266)
                      .++..-+|.|+||+|+||..++..|+....       .+++++.++.  .++-..-+|....  .....+..  +|..  
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~--   95 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR--   95 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH--
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH--
Confidence            334566899999999999999999998653       5889998663  3444455555432  12222211  1221  


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc--CCCeEEEEecC
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS--GNASIVFMSSV  156 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g~iv~vss~  156 (266)
                              +.+ ..-|++|..||....   ...+.++   .++.|..    +.+.+.+.+.+.  +...|+.+|..
T Consensus        96 --------~a~-~~advVvi~aG~prk---pGmtR~D---Ll~~Na~----I~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           96 --------VAF-DGVAIAIMCGAFPRK---AGMERKD---LLEMNAR----IFKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             --------HHT-TTCSEEEECCCCCCC---TTCCHHH---HHHHHHH----HHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             --------HHh-CCCCEEEECCCCCCC---CCCCHHH---HHHHhHH----HHHHHHHHHHhhccCceEEEEeCCC
Confidence                    112 358999999997532   1234444   4556654    344455555553  23355556543

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.84  E-value=0.038  Score=42.33  Aligned_cols=78  Identities=10%  Similarity=-0.016  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|+++|=.|++.|.   ++..|++++.+|+.++.+++.++...+.+.+.+ .++.++..|..+...          ..++
T Consensus        22 ~~~~vLDiGcG~G~---~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~----------~~~~   88 (185)
T 3mti_A           22 DESIVVDATMGNGN---DTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDH----------YVRE   88 (185)
T ss_dssp             TTCEEEESCCTTSH---HHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGG----------TCCS
T ss_pred             CCCEEEEEcCCCCH---HHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHh----------hccC
Confidence            57899999987763   455677779999999999999988888777655 467777755543211          1125


Q ss_pred             cccEEEeccccc
Q 024551           96 KLNILVNNAALV  107 (266)
Q Consensus        96 ~id~lv~~ag~~  107 (266)
                      ++|+++.+.+..
T Consensus        89 ~fD~v~~~~~~~  100 (185)
T 3mti_A           89 PIRAAIFNLGYL  100 (185)
T ss_dssp             CEEEEEEEEC--
T ss_pred             CcCEEEEeCCCC
Confidence            799999887654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.84  E-value=0.1  Score=44.10  Aligned_cols=115  Identities=12%  Similarity=0.053  Sum_probs=68.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-C--CeEEEecCChhHHHHHHHHHHhcCCeeEEEec-cCCCHHHHHHHHHHHHhhcCC
Q 024551           20 TALVTGGTRGIGYAIVEELARF-G--ASVHTCGRDQNMINERIQEWESKGFKVTGSVC-DLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~-G--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++.|+||+|.+|.+++..|+.+ +  ..++++++++ ..+-..-++......+.+... .-.+.+.           + .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~-----------~-~   68 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA-----------L-E   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHH-----------H-T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHH-----------h-C
Confidence            5889999999999999999886 5  4699999987 344344445443222222111 1111221           1 3


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSV  156 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~  156 (266)
                      ..|++|..+|....   ...+..   +.++.|..-.-.+.+.+.++   ..++.+++++..
T Consensus        69 ~aDivii~ag~~rk---pG~~R~---dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  120 (312)
T 3hhp_A           69 GADVVLISAGVARK---PGMDRS---DLFNVNAGIVKNLVQQVAKT---CPKACIGIITNP  120 (312)
T ss_dssp             TCSEEEECCSCSCC---TTCCHH---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             CCCEEEEeCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence            58999999997532   122333   35666665555555544332   345677777653

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.83  E-value=0.042  Score=46.81  Aligned_cols=79  Identities=13%  Similarity=0.135  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeE-EEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASV-HTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v-~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|+|+ +++|...+..+...|+.+ +.+++++++++. ++   +.|....+   |-++.+ ..+....+.+.  .
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~-a~---~lGa~~~i---~~~~~~-~~~~~~~~~~~--~  228 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL-AK---SFGAMQTF---NSSEMS-APQMQSVLREL--R  228 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HH---HTTCSEEE---ETTTSC-HHHHHHHHGGG--C
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH-HH---HcCCeEEE---eCCCCC-HHHHHHhhccc--C
Confidence            6899999987 889999988888899875 567788776542 33   33544332   333322 22333444332  4


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      ..|+++.++|.
T Consensus       229 g~d~v~d~~G~  239 (346)
T 4a2c_A          229 FNQLILETAGV  239 (346)
T ss_dssp             SSEEEEECSCS
T ss_pred             Ccccccccccc
Confidence            58999999884

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.80  E-value=0.043  Score=44.67  Aligned_cols=77  Identities=13%  Similarity=0.115  Sum_probs=56.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           20 TALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +++|.|++|.+|+.+++.+.+. |+.|+......+.++++.+    ....   +..|++.++.....+..+.+.   .++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~---g~~   71 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN---GIH   71 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT---TCE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc---CCC
Confidence            5899999999999999998876 8998754443333333222    1223   457999999998888887774   488


Q ss_pred             EEEecccc
Q 024551           99 ILVNNAAL  106 (266)
Q Consensus        99 ~lv~~ag~  106 (266)
                      +|+-..|.
T Consensus        72 ~VigTTG~   79 (245)
T 1p9l_A           72 AVVGTTGF   79 (245)
T ss_dssp             EEECCCCC
T ss_pred             EEEcCCCC
Confidence            99888874

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=95.80  E-value=0.09  Score=45.27  Aligned_cols=44  Identities=23%  Similarity=0.240  Sum_probs=37.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE   61 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~   61 (266)
                      ..+++.|.|+ |.+|.+++..|++.|++|.+.+|+++..+.+.+.
T Consensus        28 ~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~   71 (356)
T 3k96_A           28 FKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAE   71 (356)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHH
T ss_pred             cCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence            3457888887 8899999999999999999999999887766554

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.80  E-value=0.065  Score=48.14  Aligned_cols=42  Identities=24%  Similarity=0.266  Sum_probs=36.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE   61 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~   61 (266)
                      +++.|.|+ |.+|.++|..|++.|++|++.+++++.++...+.
T Consensus         6 ~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            6 QTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            45666766 8899999999999999999999999988877654

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.75  E-value=0.016  Score=48.22  Aligned_cols=42  Identities=21%  Similarity=0.264  Sum_probs=36.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMI   55 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~   55 (266)
                      .+++||+++|.|++.-+|+.+++.|..+|++|.++.+....+
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L  196 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL  196 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            468999999999999999999999999999999987665433

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.75  E-value=0.16  Score=42.79  Aligned_cols=40  Identities=15%  Similarity=0.085  Sum_probs=35.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERI   59 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~   59 (266)
                      +++.|.|+ |.+|.+++..|++.|. +|++.+++++.++...
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~   45 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKA   45 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHH
Confidence            57889998 8999999999999998 9999999988777643

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.75  E-value=0.028  Score=47.35  Aligned_cols=85  Identities=15%  Similarity=0.023  Sum_probs=55.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH-------HHhcCCeeEEEeccCCCHHHHHHHH---HH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE-------WESKGFKVTGSVCDLSFGDQREKLI---ET   88 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~D~~~~~~i~~~~---~~   88 (266)
                      +++.|.|+ |.+|..+++.|++.|++|++.+|++++.+++.+.       +.+.-....++..-+.++..++.++   +.
T Consensus        22 ~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~  100 (310)
T 3doj_A           22 MEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGG  100 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchh
Confidence            57888875 7899999999999999999999999887766532       0000012334444555666777766   55


Q ss_pred             HHhhcCCcccEEEeccc
Q 024551           89 VSSVFDGKLNILVNNAA  105 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag  105 (266)
                      +.+.. .+=.++|++..
T Consensus       101 l~~~l-~~g~~vv~~st  116 (310)
T 3doj_A          101 VLEQI-CEGKGYIDMST  116 (310)
T ss_dssp             GGGGC-CTTCEEEECSC
T ss_pred             hhhcc-CCCCEEEECCC
Confidence            54443 23356666554

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.72  E-value=0.054  Score=42.47  Aligned_cols=77  Identities=16%  Similarity=0.084  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-------------cCCeeEEEeccCCCHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-------------KGFKVTGSVCDLSFGDQRE   83 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~D~~~~~~i~   83 (266)
                      .++++|-.|++.|.   .+..|+++|++|+.++.++..++...+....             ...++.++++|+.+...-.
T Consensus        22 ~~~~vLD~GCG~G~---~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~   98 (203)
T 1pjz_A           22 PGARVLVPLCGKSQ---DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   98 (203)
T ss_dssp             TTCEEEETTTCCSH---HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEeCCCCcH---hHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence            67899999998873   4566788899999999999998877766532             1357889999998764211


Q ss_pred             HHHHHHHhhcCCcccEEEecccc
Q 024551           84 KLIETVSSVFDGKLNILVNNAAL  106 (266)
Q Consensus        84 ~~~~~~~~~~~~~id~lv~~ag~  106 (266)
                               . +++|+++.+...
T Consensus        99 ---------~-~~fD~v~~~~~l  111 (203)
T 1pjz_A           99 ---------I-GHCAAFYDRAAM  111 (203)
T ss_dssp             ---------H-HSEEEEEEESCG
T ss_pred             ---------C-CCEEEEEECcch
Confidence                     0 368999876543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.72  E-value=0.015  Score=50.14  Aligned_cols=82  Identities=20%  Similarity=0.183  Sum_probs=57.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh-------------------hHHHHHHHHHHhcC--CeeEE
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ-------------------NMINERIQEWESKG--FKVTG   71 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~-------------------~~~~~~~~~l~~~~--~~~~~   71 (266)
                      ..+++++|+|.|+ +|+|.++++.|+..|.. +.+++++.                   .+.+.+++.+.+..  .++..
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~  192 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSE  192 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEE
Confidence            3567899999998 78999999999999964 77877653                   34556666666543  35666


Q ss_pred             EeccCCCHHHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           72 SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        72 ~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      +..+++...++       .+ + ...|++|.+..
T Consensus       193 ~~~~i~~~~~~-------~~-~-~~~DlVvd~~D  217 (353)
T 3h5n_A          193 IALNINDYTDL-------HK-V-PEADIWVVSAD  217 (353)
T ss_dssp             EECCCCSGGGG-------GG-S-CCCSEEEECCC
T ss_pred             eecccCchhhh-------hH-h-ccCCEEEEecC
Confidence            66677655422       12 3 46788888654

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.70  E-value=0.023  Score=48.52  Aligned_cols=44  Identities=14%  Similarity=-0.029  Sum_probs=37.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l   62 (266)
                      .+++.|+|+ |.+|.+++..|+..|. +|++.+++++.++.....+
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l   53 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDL   53 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHH
Confidence            457899998 9999999999999998 9999999998877644444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	266
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-79
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-78
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-72
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-70
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-68
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-66
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-64
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	6e-64
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-63
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	6e-63
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-62
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-62
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	9e-62
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-61
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	4e-61
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-61
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	6e-61
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	6e-60
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-58
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	6e-58
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-57
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-57
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	5e-57
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	8e-57
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-56
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	7e-56
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-55
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-55
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	5e-55
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	7e-55
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-54
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-54
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-54
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-54
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-54
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	6e-54
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	7e-54
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-53
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	5e-53
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-52
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	5e-51
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-50
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-50
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-49
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	5e-49
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-47
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	4e-46
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-45
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	1e-44
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	9e-44
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-43
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	7e-42
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-38
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-38
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-38
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-37
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-37
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-34
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	4e-33
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	4e-32
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-31
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-29
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	8e-27
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-26
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-18
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	6e-18
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-16
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	3e-14
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-06
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-06
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-06
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	5e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-04
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	6e-04
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	9e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.001
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.001
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	0.002
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	0.002
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.003

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  236 bits (604), Expect = 7e-79
 Identities = 138/253 (54%), Positives = 186/253 (73%), Gaps = 1/253 (0%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           +W+L G TALVTGG+RGIGY IVEELA  GASV+TC R+Q  +N+ + +W SKGFKV  S
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           VCDLS   +R++L+ TV++ F GKLNILVNNA +V+ K A +YT+E+YS +MS N E++Y
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           HL  LAHP LKAS   ++VF+SSV+GA+++P  + Y A+KGA++QLT+ LA EWA D+IR
Sbjct: 123 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 182

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           VN V P  + T +    + D   +E + KLI +  L R  EP E++ +VAFLC PAASY+
Sbjct: 183 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 242

Query: 252 TGQVISIDGGYTA 264
           TGQ+I +DGG  A
Sbjct: 243 TGQIIYVDGGLMA 255

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  235 bits (601), Expect = 3e-78
 Identities = 141/254 (55%), Positives = 188/254 (74%), Gaps = 3/254 (1%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           ++WSL+  T LVTGGT+GIG+AIVEE A FGA +HTC R++  +NE + +W+ KGF+VTG
Sbjct: 2   QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTG 61

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
           SVCD S   +REKL++TVSS+F GKL+IL+NN   +  K   +YT E++S  +STN+ES+
Sbjct: 62  SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESA 121

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           YHL QLAHPLLKASG  +I+FMSS+AG +S    S Y+A+KGA+NQL +NLACEWA+D I
Sbjct: 122 YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 181

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           R NAV+P  + T ++    +D   +    +I++ PL R  EP E+S LVAFLC+PAASYI
Sbjct: 182 RANAVAPAVIATPLAEAVYDDEFKK---VVISRKPLGRFGEPEEVSSLVAFLCMPAASYI 238

Query: 252 TGQVISIDGGYTAG 265
           TGQ I +DGG T  
Sbjct: 239 TGQTICVDGGLTVN 252

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  221 bits (563), Expect = 1e-72
 Identities = 140/254 (55%), Positives = 193/254 (75%), Gaps = 2/254 (0%)

Query: 13  KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS 72
           +WSL+G TALVTGG++GIGYAIVEELA  GA V+TC R++  ++E ++ W  KG  V GS
Sbjct: 1   RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 60

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
           VCDL    +R+KL++TV+ VFDGKLNILVNNA +V+ K A ++T ++Y+ +M TN E++Y
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           HL Q+A+PLLKAS N +++F+SS+AG  ++P +S Y+ASKGAINQ+TK+LACEWA D+IR
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 180

Query: 193 VNAVSPWAVNTQI--SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           VN+V+P  + T +  +    N    +E    I KTP+ R+ +P E+S L+AFLC PAASY
Sbjct: 181 VNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 240

Query: 251 ITGQVISIDGGYTA 264
           ITGQ+I  DGG+TA
Sbjct: 241 ITGQIIWADGGFTA 254

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  214 bits (546), Expect = 3e-70
 Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 9/251 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G   LVTGG RGIG AI +  AR GA V  C            +  ++         D
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE------GKEVAEAIGGAFFQVD 56

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           L    +R + +E  +    G++++LVNNAA+     A    L E+  V+  N+ +  HL 
Sbjct: 57  LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
            LA   ++  G  +IV ++SV G  +    +AY ASKG +  LT++LA + A   IRVNA
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 175

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           V+P A+ T+     +      E  +        L R  +P E++  V FL    AS+ITG
Sbjct: 176 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 235

Query: 254 QVISIDGGYTA 264
            ++ +DGG TA
Sbjct: 236 AILPVDGGMTA 246

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  208 bits (532), Expect = 4e-68
 Identities = 71/249 (28%), Positives = 112/249 (44%), Gaps = 5/249 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+   A++TGG  GIG AI E  A  GA +           E      + G +V    CD
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S     E   + V S F G+ +ILVNNA +  +    E T E++      NV+S + + 
Sbjct: 61  VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 119

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P +K +G   I+ ++S    + I   + Y ++K A    T+ LA +   D I VNA
Sbjct: 120 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 179

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           ++P  V T  +       +            + R   P +++   AFL    AS+ITGQ 
Sbjct: 180 IAPSLVRTATTEASALSAMFDVLPN--MLQAIPRLQVPLDLTGAAAFLASDDASFITGQT 237

Query: 256 ISIDGGYTA 264
           +++DGG   
Sbjct: 238 LAVDGGMVR 246

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  205 bits (524), Expect = 1e-66
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 14/261 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF---KVTGS 72
                A++TG + GIG A     AR GA V   GR    + E  Q+  + G     V   
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNV 128
           V D++    +++++ T    F GKL+ILVNNA   +     K  T  ++E Y + ++ N+
Sbjct: 63  VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            S   L + A P L ++    +   S  +G  + P    Y+ +K AI+Q T+N A +   
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 189 DSIRVNAVSPWAVNTQIS-----PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL 243
             IRVN++SP  V T        P + +         +    P     +P +I+ ++AFL
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 241

Query: 244 C-LPAASYITGQVISIDGGYT 263
                +SYI G  + +DGG +
Sbjct: 242 ADRKTSSYIIGHQLVVDGGSS 262

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  200 bits (510), Expect = 1e-64
 Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 8/252 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A++TGGT GIG AI  +    GA V   GR  ++  +  +   +   ++     D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
            S  D   KL +     F G ++ LVNNA + V K   E T  E+  +++ N++  +   
Sbjct: 63  SSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 136 QLAHPLLKASGN-ASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT--DSIR 192
           +L    +K  G  ASI+ MSS+ G +  P L AY ASKGA+  ++K+ A + A     +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           VN V P  + T +          +E +    KTP+    EPN+I+ +  +L    + + T
Sbjct: 182 VNTVHPGYIKTPLVDDLPGA---EEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFAT 238

Query: 253 GQVISIDGGYTA 264
           G    +DGGYTA
Sbjct: 239 GSEFVVDGGYTA 250

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  198 bits (505), Expect = 6e-64
 Identities = 72/251 (28%), Positives = 115/251 (45%), Gaps = 9/251 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G T ++TGG RG+G     +    GA V              +E    G        D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++  +  ++++      F G ++ LVNNA +         ++E +  V+  N+   +   
Sbjct: 60  VTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P +K +G  SIV +SS AG + +   S+Y ASK  +  L+K  A E  TD IRVN+
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSA-EPNEISPLVAFLCLPAASYITGQ 254
           V P    T    P   +  +++       TP+ R   EP EI+  V  L    +SY+TG 
Sbjct: 179 VHPGMTYT----PMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGA 234

Query: 255 VISIDGGYTAG 265
            +++DGG+T G
Sbjct: 235 ELAVDGGWTTG 245

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  197 bits (502), Expect = 2e-63
 Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 5/250 (2%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           +      ALVTG  RGIG  I + LA+  + V    R Q   +  + E +S G++ +G  
Sbjct: 6   YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+S  ++  ++I  +       ++ILVNNA +           +E+  V+ TN+ S ++
Sbjct: 66  GDVSKKEEISEVINKIL-TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFY 124

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           + Q     +  +    I+ +SS+ G       + Y++SK  +   TK+LA E A+ +I V
Sbjct: 125 ITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 184

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NA++P  +++ ++      +       +I+  P  R   P E++ L  FL    + YI G
Sbjct: 185 NAIAPGFISSDMTDKISEQI----KKNIISNIPAGRMGTPEEVANLACFLSSDKSGYING 240

Query: 254 QVISIDGGYT 263
           +V  IDGG +
Sbjct: 241 RVFVIDGGLS 250

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (498), Expect = 6e-63
 Identities = 68/251 (27%), Positives = 113/251 (45%), Gaps = 12/251 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
            L G   LVTG  +GIG   V+ L   GA V    R Q      +     +   +     
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ----ADLDSLVRECPGIEPVCV 59

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL   +  E+ + +V     G +++LVNNAA+ +++   E T E +      N+ +   +
Sbjct: 60  DLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114

Query: 135 CQLAHPLL-KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            Q+    L       +IV +SS     ++   S Y ++KGA++ LTK +A E     IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           NAV+P  V T +     +D    +   ++ + PL + AE   +   + FL    +   TG
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAK--TMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG 232

Query: 254 QVISIDGGYTA 264
             + ++GG+ A
Sbjct: 233 STLPVEGGFWA 243

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  194 bits (494), Expect = 5e-62
 Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 12/260 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF---KVTGS 72
             G + ++TG + GIG +     A+ GA V   GR+++ + E  Q+    G    K+   
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKR--ATEYTLEEYSSVMSTNVES 130
           V D++    ++ +I T  + F GK++ILVNNA   +      T+  +E Y      N ++
Sbjct: 62  VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
              + Q     L  +    +   S VAG  +      YA +K A++Q T+  A +     
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 191 IRVNAVSPWAVNTQI-----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC- 244
           +RVN+VSP AV T        P   +D L           P+    +P EI+ ++ FL  
Sbjct: 181 VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 240

Query: 245 LPAASYITGQVISIDGGYTA 264
              +SYI GQ I  DGG T 
Sbjct: 241 RNLSSYIIGQSIVADGGSTL 260

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  193 bits (491), Expect = 5e-62
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 12/251 (4%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           +  G+ ALVTG  +GIG   V+ L   GA V    R     N  +     +   +     
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT----NSDLVSLAKECPGIEPVCV 57

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           DL   D  EK +  +     G +++LVNNAALV+M+   E T E +    S N+ S + +
Sbjct: 58  DLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 112

Query: 135 CQLAHPLL-KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            Q+    +       SIV +SS+   ++ P L  Y+++KGA+  LTK +A E     IRV
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N+V+P  V T +      D       KL  + PL + AE  ++   + FL    ++  +G
Sbjct: 173 NSVNPTVVLTDMGKKVSADPEFAR--KLKERHPLRKFAEVEDVVNSILFLLSDRSASTSG 230

Query: 254 QVISIDGGYTA 264
             I +D GY A
Sbjct: 231 GGILVDAGYLA 241

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (490), Expect = 9e-62
 Identities = 71/253 (28%), Positives = 117/253 (46%), Gaps = 10/253 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G   +VTGG RGIG  IV      GA V  C +D+       +  E +       +CD
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE----SGGRALEQELPGAVFILCD 59

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHL 134
           ++  D  + L+      F  +L+ +VNNA      +R  E + + +  ++  N+  +Y L
Sbjct: 60  VTQEDDVKTLVSETIRRFG-RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +LA P L+ S   +++ +SS+ GAI   +   Y A+KGA+  +TK LA + +   +RVN
Sbjct: 119 TKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 177

Query: 195 AVSPWAVNTQISP--PDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            +SP  + T +      L         + +   PL R  +P E+     FL    A++ T
Sbjct: 178 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCT 236

Query: 253 GQVISIDGGYTAG 265
           G  + + GG   G
Sbjct: 237 GIELLVTGGAELG 249

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  192 bits (488), Expect = 2e-61
 Identities = 93/253 (36%), Positives = 147/253 (58%), Gaps = 5/253 (1%)

Query: 14  WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGS 72
           + LRG  ALVTGG+RG+G+ I + LA  G SV    R+    +E  Q+  E  G +    
Sbjct: 1   FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 60

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
            CD+S  ++ +KL+E V   F GKL+ +VN A +     A E+ L+E+  V+  N+  +Y
Sbjct: 61  RCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 119

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           ++C+ A  LL+ S N SI+ + S+    +++P +SAYAASKG +  LTK LA EW    I
Sbjct: 120 YVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 179

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RVN ++P    T+++    +D   ++   ++ + PL R+  P ++  +  FL    A Y+
Sbjct: 180 RVNVIAPGWYRTKMTEAVFSD--PEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYV 237

Query: 252 TGQVISIDGGYTA 264
           TGQ+I +DGG+TA
Sbjct: 238 TGQIIFVDGGWTA 250

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  191 bits (486), Expect = 4e-61
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 8/252 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+G  ALVTGG  G+G  +V+ L   GA V     ++    +   E   +   V     D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV---RHD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S       ++  V     G LN+LVNNA +++        LE++S ++  N ES +  C
Sbjct: 61  VSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD--SIRV 193
           Q     +K +G  SI+ M+SV+  + I + + Y+ASK A++ LT+  A        +IRV
Sbjct: 120 QQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYV-KLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
           N++ P  + T +    L   + +E V          R+  P  I+ LV FL    +S ++
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238

Query: 253 GQVISIDGGYTA 264
           G  +  D     
Sbjct: 239 GSELHADNSILG 250

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  190 bits (485), Expect = 5e-61
 Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 11/250 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+    L+TG   GIG A +E  A+ GA +  C  ++  + E  +   +        V D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV-----VMD 57

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++     E+      +   G+L+ +V+ A +       +  LE++  V+  N+  S+ + 
Sbjct: 58  VADPASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA 116

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A   ++     SIV  +S    +     + YAAS   +  LT+ LA E     IRVN 
Sbjct: 117 KAASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNT 175

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           ++P  + T         +  +   K IA TPL R+ +P E++    FL    +S+ITGQV
Sbjct: 176 LAPGFIET----RMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQV 231

Query: 256 ISIDGGYTAG 265
           + +DGG T G
Sbjct: 232 LFVDGGRTIG 241

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  191 bits (487), Expect = 6e-61
 Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 14/262 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF---KVTGS 72
               T ++TG + GIG       A+ GA+V   GR    + E  Q     G    +V   
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 73  VCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNV 128
           V D++  D ++++I +    F GK+++LVNNA   +        T+  ++ Y   +  N+
Sbjct: 63  VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
           ++   + +   P L AS    +   S VAG  + P    YA +K A++Q T++ A + A 
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 189 DSIRVNAVSPWAVNTQIS-----PPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL 243
             IRVN+VSP  V T  +     P   +              P+  + +P  I+ ++ FL
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241

Query: 244 CLPAAS-YITGQVISIDGGYTA 264
                S YI GQ I  DGG + 
Sbjct: 242 ADRNLSFYILGQSIVADGGTSL 263

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  189 bits (482), Expect = 6e-60
 Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 7/253 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE-----SKGFKVT 70
           L+G  A+VTGG  GIG AIV+EL   G++V    R    +     E +     +K  +V 
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
              C++   ++   L+++    F GK+N LVNN     +  A   + + + +V+ TN+  
Sbjct: 70  PIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 128

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
           ++++C+  +         SIV +  V      P      A++  +  LTK+LA EWA   
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNII-VPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSG 187

Query: 191 IRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY 250
           IR+N V+P  + +Q +  +        +     K P  R   P E+S +V FL  PAAS+
Sbjct: 188 IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF 247

Query: 251 ITGQVISIDGGYT 263
           ITGQ + +DGG +
Sbjct: 248 ITGQSVDVDGGRS 260

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (470), Expect = 1e-58
 Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 13/254 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF--KVTGSV 73
            R   ALVTG + GIG A+   L + G  V  C R    I E   E +S G+   +    
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CDLS  +    +   + S     ++I +NNA L         +   +  + + NV +   
Sbjct: 68  CDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSI 126

Query: 134 LCQLAHPLLKASG--NASIVFMSSVAGAISIPR--LSAYAASKGAINQLTKNLACEW--A 187
             + A+  +K     +  I+ ++S++G   +P      Y+A+K A+  LT+ L  E   A
Sbjct: 127 CTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA 186

Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA 247
              IR   +SP  V TQ +      L  ++  K  A     +  +P +++  V ++    
Sbjct: 187 QTHIRATCISPGVVETQFA----FKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTP 242

Query: 248 ASYITGQVISIDGG 261
           A    G +     G
Sbjct: 243 AHIQIGDIQMRPTG 256

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (464), Expect = 6e-58
 Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 13/251 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G   ++T   +GIG A     AR GA V     ++     ++QE E K   +   V D
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE----SKLQELE-KYPGIQTRVLD 58

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++   Q ++    V  +      +L N A  V      +   +++   M+ NV S Y + 
Sbjct: 59  VTKKKQIDQFANEVERLD-----VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 136 QLAHPLLKASGNASIVFMSSVAGAIS-IPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           +   P + A  + +I+ MSSVA ++  +     Y+ +K A+  LTK++A ++    IR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVK--LIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            V P  V+T      +      E  +   + +    R A   EI+ L  +L    ++Y+T
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233

Query: 253 GQVISIDGGYT 263
           G  + IDGG++
Sbjct: 234 GNPVIIDGGWS 244

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  182 bits (464), Expect = 1e-57
 Identities = 78/259 (30%), Positives = 116/259 (44%), Gaps = 16/259 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVTGSV 73
           S    T +VTGG RGIG A    +A  GA+V    R      E  ++  +  G K     
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
           CD+S  D   K I+ + +   G ++ L+ NA + V+K ATE T E+++ V   NV   ++
Sbjct: 66  CDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124

Query: 134 LCQLAHPLLKASGNASIV--------FMSSVAGAISIPRLSAYAASKGAINQLTKNLACE 185
            C+    L         +         + + +          Y +SK A + L K LA E
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184

Query: 186 WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLC 244
           WA+  IRVNA+SP  VNT     D    + ++      +  PL R A+P E++     L 
Sbjct: 185 WASAGIRVNALSPGYVNT-----DQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLL 239

Query: 245 LPAASYITGQVISIDGGYT 263
              A+Y+TG    IDGG  
Sbjct: 240 SDHATYMTGGEYFIDGGQL 258

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  183 bits (465), Expect = 2e-57
 Identities = 52/258 (20%), Positives = 106/258 (41%), Gaps = 28/258 (10%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASV---------HTCGRDQNMINERIQEWESKG 66
             G   LVTG   G+G A     A  GA V            G+  +  ++ ++E   +G
Sbjct: 5   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64

Query: 67  FKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMST 126
            K   +   +   +  EKL++T    F G+++++VNNA ++  +  +  + E++  +   
Sbjct: 65  GKAVANYDSV---EAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRV 120

Query: 127 NVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           ++  S+ + + A   +K      I+  +S +G       + Y+A+K  +  L   L  E 
Sbjct: 121 HLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEG 180

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
             ++I  N ++P A +                   +    L  + +P  ++PLV +LC  
Sbjct: 181 RKNNIHCNTIAPNAGSRMTET--------------VMPEDLVEALKPEYVAPLVLWLCHE 226

Query: 247 AASYITGQVISIDGGYTA 264
           +     G +  +  G+  
Sbjct: 227 SC-EENGGLFEVGAGWIG 243

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  180 bits (458), Expect = 5e-57
 Identities = 76/250 (30%), Positives = 118/250 (47%), Gaps = 13/250 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  ALV+GG RG+G + V  +   GA V               E       V     D
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLD 60

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++   Q +  ++T  + F G L++LVNNA ++ +    +Y L E+  ++  N+   +   
Sbjct: 61  VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +     +K +G  SI+ +SS+ G         Y A+K A+  LTK+ A E     IRVN+
Sbjct: 120 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 179

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           + P  V T      + D + ++    I +T L R+AEP E+S LV +L    +SY TG  
Sbjct: 180 IHPGLVKT-----PMTDWVPED----IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAE 230

Query: 256 ISIDGGYTAG 265
             +DGG  AG
Sbjct: 231 FVVDGGTVAG 240

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  180 bits (458), Expect = 8e-57
 Identities = 72/256 (28%), Positives = 117/256 (45%), Gaps = 10/256 (3%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
              ALVTG T GIG  I   L + G  V  C R +  +   ++E    G +  G  CD+ 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
              + E L+  V   + G +++LVNNA         E   E +  V+ TN+   + + + 
Sbjct: 62  SVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 120

Query: 138 AHPL--LKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
                 +   G   IV ++S  G   +   + Y+ASK  +   TK L  E A   I VNA
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180

Query: 196 VSPWAVNTQI------SPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPAA 248
           V P  V T +         D+ ++  +E    + A+ P+ R  +P+E++ +VA+L  P A
Sbjct: 181 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 240

Query: 249 SYITGQVISIDGGYTA 264
           + +T Q +++ GG   
Sbjct: 241 AAVTAQALNVCGGLGN 256

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  179 bits (456), Expect = 2e-56
 Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 6/255 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+   A++TGG  GIG    +   R+GA V       +   +      S    ++   CD
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRAT--EYTLEEYSSVMSTNVESSYH 133
           ++  +    L++T  +   GKL+I+  N  ++     +  E   E++  VM  NV  ++ 
Sbjct: 63  VTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
           + + A  ++  +   SIVF +S++           Y A+K A+  LT +L  E     IR
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181

Query: 193 VNAVSPWAVNTQISPPDLN-DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           VN VSP+ V + +       D    E +   A           +++  VA+L    + Y+
Sbjct: 182 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 241

Query: 252 TGQVISIDGGYTAGN 266
           +G  + IDGGYT  N
Sbjct: 242 SGLNLVIDGGYTRTN 256

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  178 bits (453), Expect = 7e-56
 Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 12/265 (4%)

Query: 9   FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGF 67
            G +  SL G  ALVTG  RGIG  +  EL R G  V            E +   +  G 
Sbjct: 9   LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS 68

Query: 68  KVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTN 127
                  ++   +   ++ E    +F GKL+I+ +N+ +V      + T EE+  V + N
Sbjct: 69  DAACVKANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTIN 127

Query: 128 VESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA 187
               + + + A+  L+  G   ++   +   A ++P+ + Y+ SKGAI    + +A + A
Sbjct: 128 TRGQFFVAREAYKHLEIGGRLILMGSIT-GQAKAVPKHAVYSGSKGAIETFARCMAIDMA 186

Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQ---------EYVKLIAKTPLARSAEPNEISP 238
              I VN V+P  + T +      + +           +    +  +PL R   P +I+ 
Sbjct: 187 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIAR 246

Query: 239 LVAFLCLPAASYITGQVISIDGGYT 263
           +V FL      ++TG+VI IDGG  
Sbjct: 247 VVCFLASNDGGWVTGKVIGIDGGAC 271

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  177 bits (449), Expect = 1e-55
 Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 8/248 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G  ALVTG +RGIG AI E LA  GA V      +N          + G  +   + +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGL---MLN 58

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++     E  +        G+++ILVNNA +           EE++ ++ TN+ S + L 
Sbjct: 59  VTDPASIES-VLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +     +    +  I+ + SV G +     + YAA+K  +   +K+LA E A+  I VN 
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 177

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           V+P  + T ++    +     +   ++A+ P  R     EI+  VAFL    A+YITG+ 
Sbjct: 178 VAPGFIETDMTRALSD----DQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGET 233

Query: 256 ISIDGGYT 263
           + ++GG  
Sbjct: 234 LHVNGGMY 241

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  177 bits (449), Expect = 3e-55
 Identities = 67/261 (25%), Positives = 105/261 (40%), Gaps = 18/261 (6%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L+G   L+TGG  G+G A+V+     GA V    +    + E   +    G  V G V D
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVGD 59

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEY-----TLEEYSSVMSTNVES 130
           +   + +++      + F GK++ L+ NA +     A            +  V   NV+ 
Sbjct: 60  VRSLEDQKQAASRCVARF-GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
             H  +   P L AS   +++F  S AG         Y A+K AI  L + LA E A   
Sbjct: 119 YIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY- 176

Query: 191 IRVNAVSPWAVNTQISPPDLNDL------LVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
           +RVN V    +N+ +  P    +       V     L +  P+ R  E  E +    F  
Sbjct: 177 VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFA 236

Query: 245 LPA-ASYITGQVISIDGGYTA 264
               A+  TG +++ DGG   
Sbjct: 237 TRGDAAPATGALLNYDGGLGV 257

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  177 bits (449), Expect = 5e-55
 Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 4/251 (1%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSV 73
           S +G  A +TGG  G+G  +   L+  GA      R  +++    ++  S+ G KV    
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY- 132
           CD+   D  +  +  +  V  G  NI++NNAA   +      +   + ++    +  +  
Sbjct: 82  CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 140

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
              ++   L+KA   A+ + ++++        +   A++K  +  ++K+LA EW    +R
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 200

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT 252
            N + P  + T+ +   L+     E  ++I + P  R     E++ L AFLC   AS+I 
Sbjct: 201 FNVIQPGPIKTKGAFSRLDPTGTFEK-EMIGRIPCGRLGTVEELANLAAFLCSDYASWIN 259

Query: 253 GQVISIDGGYT 263
           G VI  DGG  
Sbjct: 260 GAVIKFDGGEE 270

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  175 bits (445), Expect = 7e-55
 Identities = 74/249 (29%), Positives = 127/249 (51%), Gaps = 5/249 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G  A++TG   GIG  I    A  GASV     + +  N  + E +  G +     CD
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++   +   L +   S   GK++ILVNNA      +  +  + ++      NV S +HL 
Sbjct: 69  ITSEQELSALADFAISKL-GKVDILVNNAG-GGGPKPFDMPMADFRRAYELNVFSFFHLS 126

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           QL  P ++ +G   I+ ++S+A       +++YA+SK A + L +N+A +    +IRVN 
Sbjct: 127 QLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNG 186

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           ++P A+ T      +   + Q   K++  TP+ R  +P +I+    FLC PAAS+++GQ+
Sbjct: 187 IAPGAILTDALKSVITPEIEQ---KMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQI 243

Query: 256 ISIDGGYTA 264
           +++ GG   
Sbjct: 244 LTVSGGGVQ 252

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  174 bits (443), Expect = 1e-54
 Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 12/249 (4%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           TA+VT      G      L+  G +V          +E       + F  T         
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE------LEAFAETYPQLKPMSE 55

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
            +  +LIE V+S + G++++LV+N       +   +Y +E+Y   +       + L    
Sbjct: 56  QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
              +K   +  I+F++S         LS Y +++     L   L+ E    +I V A+ P
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 174

Query: 199 WAVNTQISP---PDLNDLLVQEYVKLIAK-TPLARSAEPNEISPLVAFLCLPAASYITGQ 254
             ++++ SP   P        E+V  + K T L R     E+  LVAFL   +  Y+TGQ
Sbjct: 175 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 234

Query: 255 VISIDGGYT 263
           V  + GG+ 
Sbjct: 235 VFWLAGGFP 243

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  174 bits (443), Expect = 1e-54
 Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 11/259 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVTGSV 73
           L+G  A+VTG T GIG  I   LA  GA +   G       E+++       G KV    
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            DLS G+    L++       G+++ILVNNA +       ++  E++ ++++ N+ + +H
Sbjct: 62  ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
               A P +K  G   I+ ++S  G ++    SAY A+K  +   TK  A E A   I  
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYV--------KLIAKTPLARSAEPNEISPLVAFLCL 245
           NA+ P  V T +    ++ L  +  V         L  K P  +   P ++     FL  
Sbjct: 181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240

Query: 246 PAASYITGQVISIDGGYTA 264
            AA+ ITG  +S+DGG+TA
Sbjct: 241 DAAAQITGTTVSVDGGWTA 259

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  174 bits (441), Expect = 2e-54
 Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 11/248 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G T LVTG   GIG A ++  AR GAS+    R++ ++ E +   E++   V   V D
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VAD 59

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           +S     E +       F G+L+ + + A +     +    LE +  V+  N+  S+ + 
Sbjct: 60  VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 118

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           + A  +L+       + ++     +    L+ YAA K  +  L + LA E A   +RVN 
Sbjct: 119 RKAGEVLE---EGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNV 175

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           + P  + T    P    L    + + +  +PL R+  P E++    FL    ++YITGQ 
Sbjct: 176 LLPGLIQT----PMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQA 231

Query: 256 ISIDGGYT 263
           + +DGG +
Sbjct: 232 LYVDGGRS 239

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  173 bits (439), Expect = 3e-54
 Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 19/249 (7%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           +R    LV   +RGIG A+ + L++ GA V  C R++ ++      +          VCD
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 52

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           L      + L E V      +++ILV NA         E T E++   + +   +   + 
Sbjct: 53  LR--KDLDLLFEKV-----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 105

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNA 195
           +   P +K  G   IV ++S +    I  L    +++ A+    K L+ E A   I VN 
Sbjct: 106 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 165

Query: 196 VSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV 255
           V+P    T+     L++   ++   + ++ P+ R A+P EI+ +VAFLC   ASY+TGQ 
Sbjct: 166 VAPGWTETERVKELLSEEKKKQ---VESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQT 222

Query: 256 ISIDGGYTA 264
           I +DGG + 
Sbjct: 223 IVVDGGLSK 231

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  174 bits (441), Expect = 3e-54
 Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 8/257 (3%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF--KVTGSV 73
                 L+TGG  G+G A    LA  GA +         +              +V  +V
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATE-YTLEEYSSVMSTNVESSY 132
            D+S   Q E  +   +  F G+++   NNA +   +  TE +T  E+  V+S N+   +
Sbjct: 62  ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 133 HLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIR 192
              +    +++  G+  +V  +SV G   I   S YAA+K  +  LT+N A E+    IR
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180

Query: 193 VNAVSPWAVNTQISPPDLNDLLVQEYVK----LIAKTPLARSAEPNEISPLVAFLCLPAA 248
           +NA++P A+ T +    +  L  +   K     I   P  R  E  EI+ +VAFL    A
Sbjct: 181 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240

Query: 249 SYITGQVISIDGGYTAG 265
           SY+   V+ IDGG +A 
Sbjct: 241 SYVNATVVPIDGGQSAA 257

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  173 bits (439), Expect = 6e-54
 Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 14/259 (5%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
             G   LVTG    IG A    LA  G ++     ++  + +       KG +    VCD
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYT-LEEYSSVMSTNVESSYHL 134
           ++  +     +++V   F GK++ L NNA         +    ++++ V++ NV  ++H+
Sbjct: 63  VTSEEAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 121

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            +     +       IV  +S+AG    P ++AY  SKGAI  LT+  A + A  +IRVN
Sbjct: 122 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 181

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYV------------KLIAKTPLARSAEPNEISPLVAF 242
           A+SP  +          +L  +               ++I   P+ R  + NEI  +VAF
Sbjct: 182 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 241

Query: 243 LCLPAASYITGQVISIDGG 261
           L    +S++TG  + I GG
Sbjct: 242 LLGDDSSFMTGVNLPIAGG 260

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  173 bits (438), Expect = 7e-54
 Identities = 69/256 (26%), Positives = 102/256 (39%), Gaps = 12/256 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVC 74
           L G  AL TG  RGIG  I  EL R GASV    G       E + E +  G +      
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+S   +   L +   S F G L+ +++N+ + V     E T E +  V + N    + +
Sbjct: 64  DISKPSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q      +  G   +    + A    IP  + YA SK A+    +  A +     + VN
Sbjct: 123 AQQGLKHCRRGGRIILTSSIA-AVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVN 181

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYV---------KLIAKTPLARSAEPNEISPLVAFLCL 245
            ++P  V T +   +        Y           L    PL R   P +I   V+ LC 
Sbjct: 182 CIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQ 241

Query: 246 PAASYITGQVISIDGG 261
             + +I GQVI + GG
Sbjct: 242 EESEWINGQVIKLTGG 257

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  171 bits (433), Expect = 3e-53
 Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 7/245 (2%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            +VTG +RGIG AI   L + G  V     R      E  ++ E+ G +      D+S  
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
              E +++T    + G ++++VNNA +            ++  V+  N+   +   Q A 
Sbjct: 64  ADVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPW 199
            ++       I+ ++SV G I     + YAA+K  +   +K  A E A+ +I VN V P 
Sbjct: 123 KIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPG 182

Query: 200 AVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCL-PAASYITGQVISI 258
            + + ++     D       K++   PL R+ +P  ++ LV FL L PAASYITGQ  +I
Sbjct: 183 FIASDMTAKLGED----MEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTI 238

Query: 259 DGGYT 263
           DGG  
Sbjct: 239 DGGIA 243

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  171 bits (433), Expect = 5e-53
 Identities = 72/250 (28%), Positives = 122/250 (48%), Gaps = 5/250 (2%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKGFKVTGSVC 74
           L G   ++TG + G+G ++    A   A V    R  ++  N  ++E +  G +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++       L+++    F GKL++++NNA L     + E +L +++ V+ TN+  ++  
Sbjct: 65  DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123

Query: 135 CQLAHPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
            + A           +++ MSSV   I  P    YAASKG +  +T+ LA E+A   IRV
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
           N + P A+NT I+     D   +    + +  P+    EP EI+ + A+L    ASY+TG
Sbjct: 184 NNIGPGAINTPINAEKFADPEQRA--DVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG 241

Query: 254 QVISIDGGYT 263
             +  DGG T
Sbjct: 242 ITLFADGGMT 251

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (424), Expect = 6e-52
 Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 9/240 (3%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTG 71
           ++ S+ G   L+TG   GIG     E A+  + +     +++ + E   + +  G KV  
Sbjct: 1   RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHT 60

Query: 72  SVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESS 131
            V D S  +      + V +   G ++ILVNNA +V           +       NV + 
Sbjct: 61  FVVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAH 119

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA---T 188
           +   +   P +  + +  IV ++S AG +S+P L AY +SK A     K L  E A    
Sbjct: 120 FWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 179

Query: 189 DSIRVNAVSPWAVNTQI----SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC 244
             ++   + P  VNT      S      L  +E V  +    +    +   I   +AFL 
Sbjct: 180 TGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMH-GILTEQKMIFIPSSIAFLT 238

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 5e-51
 Identities = 60/257 (23%), Positives = 93/257 (36%), Gaps = 22/257 (8%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCD 75
           G  ALVTG  +GIG A  E L   GA V     +     +       +    K     CD
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++   Q       V   F G+L+ILVNNA             + +   +  N+ S     
Sbjct: 63  VADQQQLRDTFRKVVDHF-GRLDILVNNAG--------VNNEKNWEKTLQINLVSVISGT 113

Query: 136 QLAHPLLKASGNA---SIVFMSSVAGAISIPRLSAYAASKGAINQLTKN--LACEWATDS 190
            L    +          I+ MSS+AG + + +   Y ASK  I   T++  LA       
Sbjct: 114 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSG 173

Query: 191 IRVNAVSPWAVNT----QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP 246
           +R+NA+ P  VNT     I   +     ++    +          +P  I+  +  L   
Sbjct: 174 VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIED 233

Query: 247 AASYITGQVISIDGGYT 263
            A  + G ++ I     
Sbjct: 234 DA--LNGAIMKITTSKG 248

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  164 bits (416), Expect = 1e-50
 Identities = 36/255 (14%), Positives = 78/255 (30%), Gaps = 19/255 (7%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ-EWESKGFKVTGSV 73
            L     +      GIG     EL +                   + +  +    +T   
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 74  CDLSF-GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
            D++    + +KL++ +       ++IL+N A              +    ++ N     
Sbjct: 62  YDVTVPVAESKKLLKKIFDQL-KTVDILINGAG--------ILDDHQIERTIAINFTGLV 112

Query: 133 HLCQLAHPLLKAS---GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           +                   I  + SV G  +I ++  Y+ASK A+   T +LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            +   +++P    T +     +     +    +A+  L+   + +E             +
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSW---LDVEPRVAELLLSHPTQTSEQ--CGQNFVKAIEA 227

Query: 250 YITGQVISIDGGYTA 264
              G +  +D G   
Sbjct: 228 NKNGAIWKLDLGTLE 242

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  163 bits (413), Expect = 4e-50
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 12/255 (4%)

Query: 16  LRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L G  ALV G T  R +G+AI  +L   GA V    + + +  E  +  E+ G  +    
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLE----EYSSVMSTNVE 129
                 ++ + L   V     G L+ LV+  A    +      ++    ++   +  +  
Sbjct: 66  DVTQD-EELDALFAGVKE-AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123

Query: 130 SSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATD 189
           S   + + A PLL+  G   IV ++  A    +P+ +  A +K A+    + LA E    
Sbjct: 124 SLVAVARRAEPLLREGGG--IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPK 181

Query: 190 SIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAAS 249
            +RVNA+S   V T  +        + +  ++    PL R+    E+  L  FL  P AS
Sbjct: 182 GVRVNAISAGPVRTVAARSIPGFTKMYD--RVAQTAPLRRNITQEEVGNLGLFLLSPLAS 239

Query: 250 YITGQVISIDGGYTA 264
            ITG+V+ +D GY  
Sbjct: 240 GITGEVVYVDAGYHI 254

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  161 bits (409), Expect = 2e-49
 Identities = 69/252 (27%), Positives = 101/252 (40%), Gaps = 9/252 (3%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            ALVTG  +GIG AI   L + G +V     +         E    G        D+S  
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           DQ    +E       G  +++VNNA +         T E    V + NV+      Q A 
Sbjct: 63  DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121

Query: 140 PL-LKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
               K      I+   S AG +  P L+ Y++SK A+  LT+  A + A   I VN   P
Sbjct: 122 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 181

Query: 199 WAVNTQI-------SPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
             V T +               L     +   +  L R +EP +++  V++L  P + Y+
Sbjct: 182 GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM 241

Query: 252 TGQVISIDGGYT 263
           TGQ + IDGG  
Sbjct: 242 TGQSLLIDGGMV 253

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  159 bits (404), Expect = 5e-49
 Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 16/247 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
                + LVTGG RGIG AI + LA  G  V    R                  + G   
Sbjct: 4   PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-----------SGAPKGLFGVEV 52

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D++  D  ++    V       + +LV+NA L         T E++  V++ N+  ++ +
Sbjct: 53  DVTDSDAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV 111

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q A   ++ +    ++F+ SV+G   I   + YAASK  +  + +++A E +  ++  N
Sbjct: 112 AQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTAN 171

Query: 195 AVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ 254
            V+P  ++T         L  +     +   P  R   P E++ +V+FL    ASYI+G 
Sbjct: 172 VVAPGYIDT----DMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGA 227

Query: 255 VISIDGG 261
           VI +DGG
Sbjct: 228 VIPVDGG 234

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  156 bits (396), Expect = 2e-47
 Identities = 69/256 (26%), Positives = 106/256 (41%), Gaps = 12/256 (4%)

Query: 16  LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCD 75
           L G TAL+TG  RGIG A  E   R GA V     +         E    G        D
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALD 59

Query: 76  LSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
           ++     ++ +  +   + G ++ILVNNAAL  +    E T E Y  + + NV  +  + 
Sbjct: 60  VTDQASIDRCVAELLDRW-GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMM 118

Query: 136 QLAHPLL-KASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
           Q     +        I+ M+S AG      +  Y A+K A+  LT++         I VN
Sbjct: 119 QAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 178

Query: 195 AVSPWAVNTQI------SPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLVAFLCLPA 247
           A++P  V+ +          D  +L   E  + + A  P  R     +++ +  FL  P 
Sbjct: 179 AIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE 238

Query: 248 ASYITGQVISIDGGYT 263
           A YI  Q  ++DGG  
Sbjct: 239 ADYIVAQTYNVDGGNW 254

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  152 bits (385), Expect = 4e-46
 Identities = 56/255 (21%), Positives = 93/255 (36%), Gaps = 27/255 (10%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           +ALVTGG  G+G A    L   G  V      +            +G  +     D++  
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTRE 50

Query: 80  DQREKLIETVSSVFDGK--LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
           +   + +            ++      A  ++ +   + LE +  V+  N+  ++++ +L
Sbjct: 51  EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110

Query: 138 AHPL------LKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           A                 IV  +SVA        +AYAASKG +  LT   A E A   I
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA-RSAEPNEISPLVAFLCLPAASY 250
           RV  V+P   +T +               L A+ P   R   P E + LV  +       
Sbjct: 171 RVVTVAPGLFDTPLLQGLPEK----AKASLAAQVPFPPRLGRPEEYAALVLHIL--ENPM 224

Query: 251 ITGQVISIDGGYTAG 265
           + G+V+ +DG     
Sbjct: 225 LNGEVVRLDGALRMA 239

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  150 bits (380), Expect = 2e-45
 Identities = 53/243 (21%), Positives = 94/243 (38%), Gaps = 21/243 (8%)

Query: 21  ALVTGGTRGIGYAIVEELARFGAS-------VHTCGRDQNMINERIQEWESKGFKVTGSV 73
            L+TG  +GIG AI  E AR           +    R    + +   E  ++G       
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+S      +L   +   + G ++ LVNNA +      ++ T E++   M+TN++ ++ 
Sbjct: 64  ADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122

Query: 134 LCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRV 193
           L Q    L++   +  I F++SVA   +    S Y  SK     L + +       ++R+
Sbjct: 123 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 182

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
             V P AV T                  +     A    P +I+  V    L  +  +  
Sbjct: 183 TDVQPGAVYT-------------PMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVE 229

Query: 254 QVI 256
           ++I
Sbjct: 230 EII 232

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  149 bits (376), Expect = 1e-44
 Identities = 48/255 (18%), Positives = 108/255 (42%), Gaps = 13/255 (5%)

Query: 16  LRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L G   LVTG      I Y I + + R GA +    ++  +   R++E+ ++        
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL-KGRVEEFAAQLGSDIVLQ 61

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAAL-----VVMKRATEYTLEEYSSVMSTNV 128
           CD++     + +   +  V+  K +  V++        +        T E +      + 
Sbjct: 62  CDVAEDASIDTMFAELGKVWP-KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 129 ESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT 188
            S   + +    +L     ++++ +S +    +IP  +    +K ++    + +A     
Sbjct: 121 YSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGP 178

Query: 189 DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA 248
           + +RVNA+S   + T  +    +   +  + +  A TP+ R+    ++    AFLC   +
Sbjct: 179 EGVRVNAISAGPIRTLAASGIKDFRKMLAHCE--AVTPIRRTVTIEDVGNSAAFLCSDLS 236

Query: 249 SYITGQVISIDGGYT 263
           + I+G+V+ +DGG++
Sbjct: 237 AGISGEVVHVDGGFS 251

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  147 bits (371), Expect = 9e-44
 Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 17/258 (6%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARF---GASVHTCGRDQNMINERIQEWESK--GFKV 69
            L     ++TG +RG G A+  +LAR    G+ +    R ++M+ +  +E  ++    KV
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 70  TGSVCDLSFGDQREKLI---ETVSSVFDGKLNILVNNAALVVM---KRATEYTLEEYSSV 123
             +  DL      ++L+     +      +  +L+NNAA +            L E ++ 
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 124 MSTNVESSYHLCQLAHPLLKASGNASIV--FMSSVAGAISIPRLSAYAASKGAINQLTKN 181
            + N+ S   L        + S   S     +SS+           Y A K A + L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 182 LACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVK-LIAKTPLARSAEPNEISPLV 240
           LA E    S+RV + +P  ++  +           E    L          +    +  +
Sbjct: 183 LAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240

Query: 241 AFLCLPAASYITGQVISI 258
             L     ++ +G  +  
Sbjct: 241 LGLL-QKDTFQSGAHVDF 257

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  146 bits (368), Expect = 2e-43
 Identities = 69/269 (25%), Positives = 107/269 (39%), Gaps = 30/269 (11%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW--ESKGFKVTGSVCDLS 77
            A++TGG R IG++I   L + G  V    R      +R+      ++         DLS
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 78  ----FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSS----------- 122
                 D  E +I+     F G+ ++LVNNA+               ++           
Sbjct: 63  LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121

Query: 123 VMSTNVESSYHLCQLAHPLLKASG-----NASIVFMSSVAGAISIPRLSAYAASKGAINQ 177
           +  +N  +   L +         G     N S+V +      + +P    Y  +K A+  
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARS-AEPNEI 236
           LT+  A E A   IRVNAV+P        PP +     +EY +   K PL +S A   +I
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLL---PPAMPQETQEEYRR---KVPLGQSEASAAQI 235

Query: 237 SPLVAFLCLPAASYITGQVISIDGGYTAG 265
           +  +AFL    A YITG  + +DGG    
Sbjct: 236 ADAIAFLVSKDAGYITGTTLKVDGGLILA 264

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 7e-42
 Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 15/253 (5%)

Query: 15  SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVC 74
           S++G+ A++TGG  G+G A  E L   GAS        +    + ++  +        V 
Sbjct: 2   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 75  DLSFGDQREKLIETVSSVFDGKLNIL--VNNAALVVMKRATEYTLEEYSSVMSTNVESSY 132
                     L +      D  +N       +    +K+   +TLE++  V+  N+  ++
Sbjct: 62  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121

Query: 133 HLCQLAHPLLKAS------GNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
           ++ +L    +  +          I+  +SVA        +AY+ASKG I  +T  +A + 
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 181

Query: 187 ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA-RSAEPNEISPLVAFLCL 245
           A   IRV  ++P    T +    L  L  +    L ++ P   R  +P E + LV  +  
Sbjct: 182 APIGIRVMTIAPGLFGTPL----LTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII- 236

Query: 246 PAASYITGQVISI 258
               ++ G+VI +
Sbjct: 237 -ENPFLNGEVIRL 248

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (337), Expect = 1e-38
 Identities = 50/261 (19%), Positives = 97/261 (37%), Gaps = 12/261 (4%)

Query: 12  KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW-ESKGFKVT 70
           +   L+G   +VTG ++GIG  +   LA+ GA V    R +  + + +    E       
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 67

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVES 130
                +      E+ +     +  G L++L+ N             +      M  N  S
Sbjct: 68  YIAGTMEDMTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 126

Query: 131 SYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDS 190
              L   A P+LK S   SIV +SS+AG ++ P ++AY+ASK A++    ++  E++   
Sbjct: 127 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSR 185

Query: 191 --IRVNAVSPWAVNTQI---SPPDLNDLLVQEYVKLIAKTPLARSAEPNEI----SPLVA 241
             + +       ++T+    +   +  +      +   +     +    E+    S    
Sbjct: 186 VNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTT 245

Query: 242 FLCLPAASYITGQVISIDGGY 262
            L    +  I   + S     
Sbjct: 246 LLIRNPSRKILEFLYSTSYNM 266

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (337), Expect = 1e-38
 Identities = 45/256 (17%), Positives = 85/256 (33%), Gaps = 25/256 (9%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGR------DQNMINERIQEWESKGFKVTGSVC 74
            L+TG + GIG  +   LA   +              Q  + E  +        +     
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 75  DLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
           D+          E V+      L          ++        +  +SV+  NV  +  +
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGL---GLLGPLEALGEDAVASVLDVNVVGTVRM 121

Query: 135 CQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVN 194
            Q   P +K  G+  ++   SV G + +P    Y ASK A+  L ++LA       + ++
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181

Query: 195 AVSPWAVNTQI------SPPDLNDLL-------VQEYVKLIAKTPLARSAEPNEISPLVA 241
            +    V+T        SP ++ D           +Y+    +     +  P E++ +  
Sbjct: 182 LIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL 241

Query: 242 FLCL---PAASYITGQ 254
                  P   Y T +
Sbjct: 242 TALRAPKPTLRYFTTE 257

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  132 bits (332), Expect = 2e-38
 Identities = 38/254 (14%), Positives = 80/254 (31%), Gaps = 31/254 (12%)

Query: 18  GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
               LV GG   +G   V+        V +    +N         +             S
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTDS 51

Query: 78  FGDQREKLIETVSSVF-DGKLNILVNNAALVVMKRA-TEYTLEEYSSVMSTNVESSYHLC 135
           F +Q +++   V  +  D K++ ++  A       A ++   +    +   ++ +S    
Sbjct: 52  FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 111

Query: 136 QLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWA--TDSIRV 193
            LA           +    + A     P +  Y  +KGA++QL ++LA + +        
Sbjct: 112 HLATK--HLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA 169

Query: 194 NAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG 253
            AV P  ++T ++   + +               +       +               +G
Sbjct: 170 IAVLPVTLDTPMNRKSMPE------------ADFSSWTPLEFLVETFHDWITGNKRPNSG 217

Query: 254 ---QVISIDGGYTA 264
              QV++ DG    
Sbjct: 218 SLIQVVTTDGKTEL 231

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 1e-37
 Identities = 61/283 (21%), Positives = 98/283 (34%), Gaps = 66/283 (23%)

Query: 21  ALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
           ALVTGG +GIG AIV +L R F   V    RD       +Q+ +++G        D+   
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
                L + +   + G L++LVNNA +            +    M TN   +  +C    
Sbjct: 66  QSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124

Query: 140 PLLKASGNASIVFMSSVAGAISIPRLSAYAA----------------------------- 170
           PL+K  G   +V +SS+    ++   S                                 
Sbjct: 125 PLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182

Query: 171 ------------SKGAINQLTKNLACEWA----TDSIRVNAVSPWAVNTQISPPDLNDLL 214
                       +K  +  L++  A + +     D I +NA  P  V T     D+    
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT-----DMAGPK 237

Query: 215 VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS 257
             +  +  A+TP+  +  P            P A    GQ +S
Sbjct: 238 ATKSPEEGAETPVYLALLP------------PDAEGPHGQFVS 268

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  130 bits (326), Expect = 3e-37
 Identities = 63/267 (23%), Positives = 100/267 (37%), Gaps = 43/267 (16%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
            +++G   GIG A  + L   G  +         +                 + DLS  +
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTAE 46

Query: 81  QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLE--------------------EY 120
            R++ I  V +     ++ LV  A L    +     +                       
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQ 106

Query: 121 SSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP-RLSAYAASKGAINQLT 179
            + +  +  +S HL    +PL  A          ++           AYA SK A+    
Sbjct: 107 PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV 166

Query: 180 KNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK--TPLARSAEPNEIS 237
           +  A  W    +R+N ++P A  T +    L D     Y + IAK   P+ R AEP+E++
Sbjct: 167 RKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD---PRYGESIAKFVPPMGRRAEPSEMA 223

Query: 238 PLVAFLCLPAASYITGQVISIDGGYTA 264
            ++AFL  PAASY+ G  I IDGG  A
Sbjct: 224 SVIAFLMSPAASYVHGAQIVIDGGIDA 250

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  121 bits (305), Expect = 3e-34
 Identities = 38/246 (15%), Positives = 89/246 (36%), Gaps = 29/246 (11%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD 80
            +V GG   +G AI+E   + G +V       N   +     +           + ++ +
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWTE 54

Query: 81  QREKLIETVSSVFD-GKLNILVNNAALVVMKRAT-EYTLEEYSSVMSTNVESSYHLCQLA 138
           Q + ++E  +S     +++ +   A       A+ +  ++    ++  +V SS    +LA
Sbjct: 55  QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLA 114

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWAT--DSIRVNAV 196
                      +    + A     P +  Y  +K A++ LT +LA + +   D+  V  +
Sbjct: 115 TT--HLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTI 172

Query: 197 SPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV-AFLCLPAASYITGQV 255
            P  ++T +              K +     +     + IS  +  +    ++   +G +
Sbjct: 173 MPVTLDTPM------------NRKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGAL 220

Query: 256 ISIDGG 261
           + I   
Sbjct: 221 LKITTE 226

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  119 bits (298), Expect = 4e-33
 Identities = 49/237 (20%), Positives = 83/237 (35%), Gaps = 26/237 (10%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVH--TCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           + +VTG  RGIG  +V++L +     H     RD     E       K  +V      ++
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVT 61

Query: 78  FGDQREKLIETVSSVFDGK-LNILVNNA-ALVVMKRATEYTLEEYSSVMSTNVESSYHLC 135
                +  +  V  +     L++L+NNA  L+     TE      +  +  N  S   L 
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 136 QLAHPLLKASGNASIV------------------FMSSVAGAISIPRLSAYAASKGAINQ 177
           Q   PLLK + +                       ++      +   + AY  SK AIN 
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPN 234
             + LA +   D++ V    P  V T +   +   L V++    +  +        N
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-AALTVEQSTAELISSFNKLDNSHN 237

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  117 bits (292), Expect = 4e-32
 Identities = 50/253 (19%), Positives = 97/253 (38%), Gaps = 8/253 (3%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L+G   L+ G    + I Y I +     GA++     +++ + +R++    +        
Sbjct: 3   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYE 61

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYH 133
            D+S  +  + L  +V     G L+ +V++ A    +      LE   S  +T +E S +
Sbjct: 62  LDVSKEEHFKSLYNSVKK-DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 134 LCQLAHPLLKASGNASI--VFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
                   LK   N     + +S +     +   +    +K A+    + LA +     I
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHI 180

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI 251
           RVNA+S   + T  S    +              PL ++    E+     +L    +S +
Sbjct: 181 RVNALSAGPIRTLASSGIADF--RMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGV 238

Query: 252 TGQVISIDGGYTA 264
           +G+V  +D GY  
Sbjct: 239 SGEVHFVDAGYHV 251

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  114 bits (286), Expect = 4e-31
 Identities = 61/283 (21%), Positives = 101/283 (35%), Gaps = 47/283 (16%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-------------------MINERIQE 61
           ALVTG  + +G +I E L   G +V                            +   +  
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 62  WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEY- 120
             +           ++   +  +L+    + + G+ ++LVNNA+            + + 
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 121 -------------SSVMSTNVESSYHLCQLAH------PLLKASGNASIVFMSSVAGAIS 161
                        + +  +N  + Y L +         P      N SI+ M        
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKL 221
           +   + Y  +KGA+  LT++ A E A   IRVN V P         P         +   
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPP------AVWEGH 237

Query: 222 IAKTPLA-RSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT 263
            +K PL  R +   E+S +V FLC   A YITG  + +DGGY+
Sbjct: 238 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 280

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  109 bits (271), Expect = 3e-29
 Identities = 55/261 (21%), Positives = 93/261 (35%), Gaps = 39/261 (14%)

Query: 20  TALVTGGTRGIGYAIVEELARF---GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDL 76
           + L+TG  RG+G  +V+ L         + T  R++    E +++       +     DL
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 62

Query: 77  SFGDQREKLIETVSSV--FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHL 134
              D  +KL+  +  V    G   +  N        R T    +E    + TN      L
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 135 CQLAHPLLKASGNASIV-----------FMSSVAGAI---SIPRLSAYAASKGAINQLTK 180
            +   PLLK +  A+              MSS+ G+I   +   + AY  SK A+N  TK
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182

Query: 181 NLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLV 240
           +L+ +     I   ++ P  V T +                 +  PL       +I   +
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGG---------------SSAPLDVPTSTGQIVQTI 227

Query: 241 AFLCLPAASYITGQVISIDGG 261
           + L         G  ++ DG 
Sbjct: 228 SKL----GEKQNGGFVNYDGT 244

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  102 bits (255), Expect = 8e-27
 Identities = 42/260 (16%), Positives = 81/260 (31%), Gaps = 13/260 (5%)

Query: 16  LRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSV 73
           L G   LV+G      I + I       GA +   G D+  + +RI +       +    
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 63

Query: 74  CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMS--TNVESS 131
                         T +     KL+ +V++   +           +            S+
Sbjct: 64  VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 123

Query: 132 YHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSI 191
           Y    +A  LL        +       + ++P  +    +K A+  + + +A E     +
Sbjct: 124 YSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGV 183

Query: 192 RVNAVSPWAVNTQISPPDLNDLLVQEYV--------KLIAKTPLARS-AEPNEISPLVAF 242
           R N V+   + T      +   L +E              + P+  +  +   ++  V  
Sbjct: 184 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA 243

Query: 243 LCLPAASYITGQVISIDGGY 262
           L        TG +I  DGG 
Sbjct: 244 LLSDWLPATTGDIIYADGGA 263

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  102 bits (254), Expect = 2e-26
 Identities = 52/285 (18%), Positives = 91/285 (31%), Gaps = 37/285 (12%)

Query: 15  SLRGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNM------------------ 54
            LRG  A + G     G G+A+ + LA  GA +        +                  
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 55  -------------INERIQEWESKGFKVTGSVC-DLSFGDQREKLIETVSSVFDGKLNIL 100
                        ++      E     V  +     S     ++  E V   F     ++
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 101 VNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI 160
            + A    + +    T  +      +    S+         +   G ASI      +  I
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184

Query: 161 SIPRLSAYAASKGAINQLTKNLACEWATDS-IRVNAVSPWAVNTQISPPDLNDLLVQEYV 219
                   +++K A+   T+ LA E      IRVN +S   + ++ +        + E  
Sbjct: 185 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIE-- 242

Query: 220 KLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTA 264
                 P+ ++   +E+    AFL  P AS ITG  I +D G  +
Sbjct: 243 YSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS 287

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 81.9 bits (200), Expect = 1e-18
 Identities = 42/321 (13%), Positives = 86/321 (26%), Gaps = 78/321 (24%)

Query: 21  ALVTG--GTRGIGYAIVEELARFGASV-------HTCGRDQNMINERIQE---------- 61
             + G   T G G+ I +EL++    +             +N  N +             
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 62  ---------------WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAAL 106
                           +           ++      E +   +   + GK+N+LV++ A 
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLAN 123

Query: 107 VVMKRAT-EYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL 165
               +     T  +      +    S          +    ++ I      +  +     
Sbjct: 124 AKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGYG 183

Query: 166 SAYAASKGAINQLTKNLACEWATDS-IRVNAVSPWAVNT--------------------- 203
              +++K A+   T+ LA     +  IR+N +S   + +                     
Sbjct: 184 GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNK 243

Query: 204 --------------------QISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL 243
                               +IS       +           PL +     +I  + +FL
Sbjct: 244 NRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFL 303

Query: 244 CLPAASYITGQVISIDGGYTA 264
               +  ITGQ I +D G   
Sbjct: 304 LSRESRAITGQTIYVDNGLNI 324

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 77.2 bits (189), Expect = 6e-18
 Identities = 32/195 (16%), Positives = 62/195 (31%), Gaps = 15/195 (7%)

Query: 2   AEAAEPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE 61
           A     V      S++G  A+V  GT  +G      LA  GA V  CGR  +        
Sbjct: 7   AAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADS 66

Query: 62  WESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS 121
              +   V  +  + +    R + ++          + +    A+ +           + 
Sbjct: 67  VNKRFK-VNVTAAETADDASRAEAVKGA--------HFVFTAGAIGLE----LLPQAAWQ 113

Query: 122 SVMSTNVESSYHLCQ-LAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTK 180
           +  S  + + Y+    L    + A+            GA+ I  L      +  I +L +
Sbjct: 114 NESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGL-KLKLHRACIAKLFE 172

Query: 181 NLACEWATDSIRVNA 195
           +    +  + I   A
Sbjct: 173 SSEGVFDAEEIYKLA 187

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 73.6 bits (179), Expect = 2e-16
 Identities = 16/180 (8%), Positives = 49/180 (27%), Gaps = 1/180 (0%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           M   + GGT  +G  +   LA  G  +    R +     +  E+       + +      
Sbjct: 1   MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
             +   +           ++   +   ++  K      +            S     ++ 
Sbjct: 61  AAEACDIAVLTIPWEHA-IDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIV 119

Query: 139 HPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSP 198
             +L++    S +     A   ++     +       +  +K +     ++   +  +  
Sbjct: 120 AEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 68.1 bits (165), Expect = 3e-14
 Identities = 50/197 (25%), Positives = 75/197 (38%), Gaps = 15/197 (7%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASV----HTCGRDQNMINERIQEWESKG 66
           D +W   G T LVTGGT G+G  I   LAR GA         G D +   E + E E+ G
Sbjct: 3   DDEWKPTG-TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG 61

Query: 67  FKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMST 126
            + T + CD++  +   +L+  +            + AA +        T E        
Sbjct: 62  ARTTVAACDVTDRESVRELLGGIGDDVPLSAVF--HAAATLDDGTVDTLTGERIERASRA 119

Query: 127 NVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
            V  + +L +L   L       + V  SS A A   P L  YA     ++     LA + 
Sbjct: 120 KVLGARNLHELTREL----DLTAFVLFSSFASAFGAPGLGGYAPGNAYLD----GLAQQR 171

Query: 187 ATDSIRVNAVSPWAVNT 203
            +D +   AV+      
Sbjct: 172 RSDGLPATAVAWGTWAG 188

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 45.6 bits (107), Expect = 2e-06
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 20/194 (10%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
            AL+TG T   G  + E L   G  VH   R  +  N    +   +          L +G
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           D  +      S++      +  +    +        + E        +   +  L +   
Sbjct: 63  DLSDT-----SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIR 117

Query: 140 PLLKASGNASIVFMSS--VAGAISIPRL---------SAYAASKGAINQLTKNLACEWAT 188
             L           S+  + G +              S YA +K     +T N    +  
Sbjct: 118 -FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGM 176

Query: 189 DSIRV---NAVSPW 199
            +      N  SP 
Sbjct: 177 YACNGILFNHESPR 190

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 2e-06
 Identities = 32/194 (16%), Positives = 52/194 (26%), Gaps = 21/194 (10%)

Query: 21  ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN-ERIQEWESKGFKVTGSVCDLSFG 79
           AL+TG T   G  + E L   G  VH   R  +  N  RI+               L +G
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           D  +               I    A   V     + + +        +   +  L     
Sbjct: 64  DLTDSTCLVKIINEVKPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVK 118

Query: 140 PLLKASGNASIVFMSS--VAGAISIPRL---------SAYAASKGAINQLTKNLACEWAT 188
                  +      S+  + G +              S Y A+K     +  N    +  
Sbjct: 119 -TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 177

Query: 189 DSIRV---NAVSPW 199
            ++     N  SP 
Sbjct: 178 FAVNGILFNHESPR 191

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 44.7 bits (105), Expect = 4e-06
 Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 40/211 (18%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS 77
           M  L+TGG   IG A+V  + +    +V    +     N       S+  +      D+ 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQL 137
              +  ++ E        + + +++ AA   + R+           + TN+  +Y L ++
Sbjct: 61  DSAEITRIFE------QYQPDAVMHLAAESHVDRSITGPAA----FIETNIVGTYALLEV 110

Query: 138 AH-----PLLKASGNASIVFMSSVAGAISIPR---------------------LSAYAAS 171
           A             N     +S+      +P                       S Y+AS
Sbjct: 111 ARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSAS 170

Query: 172 KGAINQLTKNLACEWATDSIRV---NAVSPW 199
           K + + L +     +   +I     N   P+
Sbjct: 171 KASSDHLVRAWRRTYGLPTIVTNCSNNYGPY 201

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 43.8 bits (102), Expect = 1e-05
 Identities = 32/221 (14%), Positives = 58/221 (26%), Gaps = 24/221 (10%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN----ERIQEWESKGFK-VTGSV 73
              +VTGG   IG   V  +      VH    D  +        ++       + V G +
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD-KLTYAGNKANLEAILGDRVELVVGDI 61

Query: 74  CDLSFGDQREKLIET---------VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVM 124
            D    D+     +            +  +     +  N         T   LE      
Sbjct: 62  ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNF------IGTYTLLEAARKYD 115

Query: 125 STNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLAC 184
                 S        PL +                 +    S Y+++K A + + K    
Sbjct: 116 IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVR 175

Query: 185 EWATDSIRV---NAVSPWAVNTQISPPDLNDLLVQEYVKLI 222
            +   +      N   P+    +  P  + ++L     KL 
Sbjct: 176 SFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLY 216

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 25/197 (12%), Positives = 50/197 (25%), Gaps = 42/197 (21%)

Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
           L+TGG   +G  + ++L   G  V             ++ W            +L   D 
Sbjct: 5   LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGH------ENFELINHDV 58

Query: 82  REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPL 141
            E L   V  ++        + A+           ++     + TN   + ++  LA   
Sbjct: 59  VEPLYIEVDQIY--------HLASPASPPNYMYNPIK----TLKTNTIGTLNMLGLAK-- 104

Query: 142 LKASGNASIVFMSSVAGAISIPRL----------------SAYAASKGAINQLTKNLACE 185
                 A ++  S+                          + Y   K     +      +
Sbjct: 105 ---RVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 161

Query: 186 WATDSIRV---NAVSPW 199
              +       N   P 
Sbjct: 162 EGVEVRVARIFNTFGPR 178

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.3 bits (95), Expect = 5e-05
 Identities = 13/52 (25%), Positives = 21/52 (40%)

Query: 17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK 68
           G   LVTG    +   +VE+L   G  V    R  + +    + W++K   
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG 61

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 41.4 bits (95), Expect = 5e-05
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE-SKGFK-VTGSV 73
           +G    VTG T   G  +   L   GA+V         +    +    + G +   G +
Sbjct: 6  WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDI 65

Query: 74 CDLSF 78
           D + 
Sbjct: 66 RDQNK 70

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 23/188 (12%), Positives = 53/188 (28%), Gaps = 11/188 (5%)

Query: 11  DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVT 70
           ++ W    +   +TG    I   I   L   G  V           ++ +      F   
Sbjct: 8   EQYWPSENLKISITGAGGFIASHIARRLKHEGHYVI------ASDWKKNEHMTEDMFCDE 61

Query: 71  GSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVM----ST 126
             + DL   +   K+ E V  VF+   ++                      +++      
Sbjct: 62  FHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN 121

Query: 127 NVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEW 186
            ++  ++               + V +       + P+  A+   K A  +L K+   ++
Sbjct: 122 GIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ-DAFGLEKLATEELCKHYNKDF 180

Query: 187 ATDSIRVN 194
             +     
Sbjct: 181 GIECRIGR 188

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 26/197 (13%), Positives = 52/197 (26%), Gaps = 52/197 (26%)

Query: 22  LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ 81
            + G    +G AI  +L + G                                +L     
Sbjct: 6   FIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------------LNLLDSRA 45

Query: 82  REKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPL 141
                 +       +++ +   AA V    A      ++   +  N+    ++   AH  
Sbjct: 46  VHDFFASE------RIDQVYLAAAKVGGIVANNTYPADF---IYQNMMIESNIIHAAH-- 94

Query: 142 LKASGNASIVFMSSVA----------------GAISIPRLSAYAASKGAINQLTKNLACE 185
              +    ++F+ S                       P    YA +K A  +L ++   +
Sbjct: 95  --QNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQ 152

Query: 186 WATDSIRV---NAVSPW 199
           +  D   V   N   P 
Sbjct: 153 YGRDYRSVMPTNLYGPH 169

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 39.4 bits (91), Expect = 3e-04
 Identities = 38/217 (17%), Positives = 65/217 (29%), Gaps = 27/217 (12%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF 78
           M  LVTGG   IG   V +L               + +              G+  +L+ 
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS----------LTYAGNRANLAP 50

Query: 79  GDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLA 138
            D   +L      + D  L          ++  A E  ++   +  S   E++    Q  
Sbjct: 51  VDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTL 110

Query: 139 HPLLKASGNASIVFMS--SVAGAISIPRL---------SAYAASKGAINQLTKNLACEWA 187
                 +G   +V +S   V G+I              S YAASK   + + +       
Sbjct: 111 LQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYH---R 167

Query: 188 TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAK 224
           T  + V             P    + L+  +V  +  
Sbjct: 168 TYGLDVRITRCCNN---YGPYQHPEKLIPLFVTNLLD 201

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 11/119 (9%)

Query: 19  MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFK-VTGSVCDLS 77
           M  LVTGG+  IG     +L + G  V       N     +   E  G K  T    D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 78  FGDQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQ 136
                 +++       D  ++ +++ A L  +  + +  LE Y      NV  +  L  
Sbjct: 61  NEALMTEILH------DHAIDTVIHFAGLKAVGESVQKPLEYY----DNNVNGTLRLIS 109

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.5 bits (88), Expect = 6e-04
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN-ERIQEWESKGFKVTGSVCDLSF 78
           AL+TG T   G  + E L   G  VH   R  +  N +RI         V  ++  L +
Sbjct: 3  IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 79 GDQREK 84
           D  + 
Sbjct: 63 ADLTDA 68

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 37.8 bits (86), Expect = 9e-04
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 9/63 (14%)

Query: 11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN----ERIQEWESKG 66
          DKK        L+ GGT  IG  IV      G   +   R + + N    + +  ++  G
Sbjct: 1  DKK-----SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG 55

Query: 67 FKV 69
           K+
Sbjct: 56 AKL 58

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.6 bits (85), Expect = 0.001
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 18 GMTALVTGGTRGIGYAIVEELARFGASVH 46
          G   +V GG    G+A    L++    V 
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKNYEVC 29

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN-ERIQEWE-SKGFK-VTGSVCDL 76
          +ALVTG T   G  + + L   G  VH     ++     R++E       +   G + D 
Sbjct: 2  SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 77 SF 78
            
Sbjct: 62 CS 63

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 7/41 (17%), Positives = 13/41 (31%)

Query: 22 LVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW 62
           + G T   G   + +  + G  V    RD + +       
Sbjct: 7  AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRP 47

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.9 bits (84), Expect = 0.002
 Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 11/136 (8%)

Query: 20  TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFG 79
             L+TG    IG  ++E L +    V             + E  S   +   S      G
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 77

Query: 80  DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAH 139
           D R       +      +              +   ++ +  +  +TN++   ++   A 
Sbjct: 78  DIRNLDDCNNACAGVDYVLHQAALG-------SVPRSINDPITSNATNIDGFLNMLIAA- 129

Query: 140 PLLKASGNASIVFMSS 155
              + +   S  + +S
Sbjct: 130 ---RDAKVQSFTYAAS 142

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 35.9 bits (81), Expect = 0.003
 Identities = 8/53 (15%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 22 LVTGGTRGIGYAIVEELARFGASVHTCGRD-----QNMINERIQEWESKGFKV 69
          L+ G T  IG  + +     G       R+      +   + ++ +++ G  +
Sbjct: 7  LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 59

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	266
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.85
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.83
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.76
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.74
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.73
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.71
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.7
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.69
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.69
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.69
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.68
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.68
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.67
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.66
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.66
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.65
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.61
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.59
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.59
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.59
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.56
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.55
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.55
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.32
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.26
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.19
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.16
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.12
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.1
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.01
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.83
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.19
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.19
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.17
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.02
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.02
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.01
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.0
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.96
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.95
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.91
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.85
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.83
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.8
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.68
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.67
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.59
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.54
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.52
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.46
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.45
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.36
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.31
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.31
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.3
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.17
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.17
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.14
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.14
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.12
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.11
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.09
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.06
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.04
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.04
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.03
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.02
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.01
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.97
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.97
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.96
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.87
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.86
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.83
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.8
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.79
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.76
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.74
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.73
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.71
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.67
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.67
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.64
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.64
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.59
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.56
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.56
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.56
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	96.47
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.46
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.46
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.44
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.37
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.37
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	96.34
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.32
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.3
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	96.24
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.24
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.21
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.2
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.18
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.18
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.07
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.03
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.02
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.89
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.88
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.85
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.81
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.79
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.65
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.61
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.55
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.54
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.35
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.28
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.21
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.18
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.16
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.13
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.08
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.04
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.03
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.94
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.77
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.71
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.69
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.65
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	94.65
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.65
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.64
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.61
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	94.61
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.6
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.52
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.46
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.42
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	94.34
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.25
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.23
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.22
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	94.16
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	94.07
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.04
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.03
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.0
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.97
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.89
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.8
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.58
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.52
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.45
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.41
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.38
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.23
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.12
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.1
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.02
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.01
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.92
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.84
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.83
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.71
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.43
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	92.27
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.26
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.23
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	92.21
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	92.12
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.98
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	91.93
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	91.85
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	91.84
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.66
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	91.56
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.55
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.42
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.27
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.27
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.25
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.23
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.16
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	91.1
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.1
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	91.04
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.01
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.01
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	90.98
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	90.92
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	90.85
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	90.66
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	90.53
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	90.52
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	90.42
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	90.21
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	90.06
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	89.98
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	89.95
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	89.94
d1ydhb_	181	Hypothetical protein At5g11950 {Thale cress (Arabi	89.94
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.83
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	89.63
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.35
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.23
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.09
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	89.02
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	88.95
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.81
d1t35a_	179	Hypothetical protein YvdD {Bacillus subtilis [TaxI	88.76
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.67
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	88.58
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	88.51
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	88.14
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	88.0
d2q4oa1	183	Hypothetical protein At2g37210/T2N18.3 {Thale cres	87.8
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	87.79
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	87.76
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	87.59
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	87.52
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	87.39
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	87.22
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.21
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	87.04
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	87.0
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	86.44
d1a9xa2	138	Carbamoyl phosphate synthetase, large subunit allo	86.39
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.24
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	86.21
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	86.08
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	86.05
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	86.05
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	85.8
d2b9ea1	293	NOL1R {Human (Homo sapiens) [TaxId: 9606]}	84.98
d1t5la2	181	Nucleotide excision repair enzyme UvrB {Bacillus c	84.89
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	84.63
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.34
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	84.19
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	84.15
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	83.9
d2h00a1	250	Methyltransferase 10 domain containing protein MET	83.86
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	83.82
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	83.78
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	83.44
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	83.34
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	83.27
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	83.19
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	83.18
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	82.93
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	82.58
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	82.52
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.37
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.26
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	82.14
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	82.03
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	81.8
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	81.65
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	80.71
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	80.61
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	80.54
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	80.51
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	80.21
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	80.1
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	80.08
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	80.07
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	80.07
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	80.05

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-62  Score=411.37  Aligned_cols=253  Identities=56%  Similarity=0.920  Sum_probs=205.7

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +.+++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.++.||++++++++++++++.
T Consensus         1 s~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d1xq1a_           1 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVS   80 (259)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+++++|+||||||+....++.+.+.++|++.+++|+.++|+++|+++|+|++++.|+||++||..+..+.++...|++
T Consensus        81 ~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  160 (259)
T d1xq1a_          81 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSA  160 (259)
T ss_dssp             HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHH
T ss_pred             HHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccc
Confidence            99867899999999999889999999999999999999999999999999999988999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|++......++.   ........|++|+++|||+|++++||+|++++|
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~---~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  237 (259)
T d1xq1a_         161 TKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF---KKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHHHHHHTSGGGTT
T ss_pred             cccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHH---HHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999999876544322   234556789999999999999999999999999


Q ss_pred             ccccEEEeCCCccCCC
Q 024551          251 ITGQVISIDGGYTAGN  266 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~~  266 (266)
                      +|||.|.||||+++++
T Consensus       238 iTG~~i~vDGG~s~~g  253 (259)
T d1xq1a_         238 ITGQTICVDGGLTVNG  253 (259)
T ss_dssp             CCSCEEECCCCEEETT
T ss_pred             CcCcEEEeCCCEECCC
Confidence            9999999999999864

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=3.5e-62  Score=408.92  Aligned_cols=254  Identities=54%  Similarity=0.905  Sum_probs=237.3

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .+++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++++|++|+++++++++++.+
T Consensus         2 g~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d2ae2a_           2 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN   81 (259)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      ++++++|++|||||+....++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||+++|..+..+.|+...|++|
T Consensus        82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  161 (259)
T d2ae2a_          82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT  161 (259)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHH
Confidence            88558999999999998889999999999999999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-HHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      |+|+++|+|+++.||+++|||||+|+||+|+|++......... .+...+.....|++|+++|||+|++++||+|+.++|
T Consensus       162 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  241 (259)
T d2ae2a_         162 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY  241 (259)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            9999999999999999999999999999999998655443322 334456678899999999999999999999999999


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      +|||+|.||||++.+
T Consensus       242 itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         242 VTGQIIYVDGGLMAN  256 (259)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CcCcEEEECCCeEee
Confidence            999999999999863

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.3e-62  Score=405.41  Aligned_cols=249  Identities=37%  Similarity=0.629  Sum_probs=230.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ++++||++|||||++|||+++|++|+++|++|++++|+++++++.++++.+. +.++.++++|++|+++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999999999999887544 778999999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y~~s  171 (266)
                      + +++|+||||||+...+++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||+++|..+. .+.++...|++|
T Consensus        81 ~-g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~as  159 (251)
T d1vl8a_          81 F-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS  159 (251)
T ss_dssp             H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred             c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHH
Confidence            9 89999999999988889999999999999999999999999999999999989999999997664 477888999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+|+++|+|+++.|++++|||||+|+||+++|++........  ..........|++|+++|||+|++++||+|++++|+
T Consensus       160 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~i  237 (251)
T d1vl8a_         160 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP--EKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYV  237 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCH--HHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCH--HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCC
Confidence            999999999999999999999999999999999976544332  233566778999999999999999999999999999


Q ss_pred             cccEEEeCCCccCC
Q 024551          252 TGQVISIDGGYTAG  265 (266)
Q Consensus       252 ~G~~l~vdgG~~~~  265 (266)
                      |||+|.|||||+.+
T Consensus       238 tG~~i~vDGG~ta~  251 (251)
T d1vl8a_         238 TGQIIFVDGGWTAN  251 (251)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCcEEEeCcCeeCc
Confidence            99999999999853

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.5e-62  Score=406.44  Aligned_cols=248  Identities=28%  Similarity=0.394  Sum_probs=230.9

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ...++++||++|||||++|||+++|++|+++|++|++++|+++.++++++++++.+.++.++++|++|+++++++++++.
T Consensus         3 n~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           3 NYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||.....++.+.+.++|++++++|+.++++++|+++|.|++++.|+||++||..+..+.++...|++
T Consensus        83 ~~~-g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a  161 (251)
T d2c07a1          83 TEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  161 (251)
T ss_dssp             HHC-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             Hhc-CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHH
Confidence            999 8999999999999888999999999999999999999999999999999998999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||+|+++|+|+++.||+++|||||+|+||+++|++.....+    +.........|++|+++|||+|++++||+|++++|
T Consensus       162 sKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~----~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  237 (251)
T d2c07a1         162 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE----QIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY  237 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH----HHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999999999999999999776432    22356677899999999999999999999999999


Q ss_pred             ccccEEEeCCCcc
Q 024551          251 ITGQVISIDGGYT  263 (266)
Q Consensus       251 ~~G~~l~vdgG~~  263 (266)
                      +|||+|.||||++
T Consensus       238 itG~~i~vDGG~s  250 (251)
T d2c07a1         238 INGRVFVIDGGLS  250 (251)
T ss_dssp             CCSCEEEESTTSC
T ss_pred             CcCcEEEECCCcC
Confidence            9999999999986

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-61  Score=404.96  Aligned_cols=249  Identities=30%  Similarity=0.463  Sum_probs=232.9

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ...|+++||++|||||++|||+++|++|+++|++|++++|+++.++++++++++.+.++.++++|++|+++++++++++.
T Consensus         4 ~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~   83 (255)
T d1fmca_           4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999999999999999988899999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                      +.+ +++|+||||||+....++ +.+.++|++.+++|+.++++++|.++|+|.+++.|+||++||.++..+.++...|++
T Consensus        84 ~~~-g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~a  161 (255)
T d1fmca_          84 SKL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_dssp             HHH-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             HHc-CCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchh
Confidence            999 789999999998877665 789999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          171 SKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       171 sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|++......++.   ........|++|+++|||+|++++||+|+.++|
T Consensus       162 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~---~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  238 (255)
T d1fmca_         162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI---EQKMLQHTPIRRLGQPQDIANAALFLCSPAASW  238 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHH---HHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999998766554432   245567899999999999999999999999999


Q ss_pred             ccccEEEeCCCccC
Q 024551          251 ITGQVISIDGGYTA  264 (266)
Q Consensus       251 ~~G~~l~vdgG~~~  264 (266)
                      +|||+|.||||+..
T Consensus       239 itG~~i~vDGG~~~  252 (255)
T d1fmca_         239 VSGQILTVSGGGVQ  252 (255)
T ss_dssp             CCSCEEEESTTSCC
T ss_pred             CcCCEEEECcCccc
Confidence            99999999999864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-61  Score=402.28  Aligned_cols=242  Identities=30%  Similarity=0.425  Sum_probs=227.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.++++++++.   .++.++++|++|+++++++++++.+.+ 
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEF-   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhccc-
Confidence            6899999999999999999999999999999999999999999988874   467889999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||....+++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.++...|++||+|
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  156 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG  156 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence            89999999999998899999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++|+|+++.||+++|||||+|+||+++|++.....++    .........|++|+.+|||+|++++||+|++++|+|||
T Consensus       157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~----~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq  232 (243)
T d1q7ba_         157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD----QRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGE  232 (243)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH----HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh----HHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCC
Confidence            99999999999999999999999999999987654332    23566778999999999999999999999999999999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      .|.||||+++
T Consensus       233 ~i~vdGG~~~  242 (243)
T d1q7ba_         233 TLHVNGGMYM  242 (243)
T ss_dssp             EEEESTTSSC
T ss_pred             eEEECCCeEe
Confidence            9999999986

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=4.9e-61  Score=399.22  Aligned_cols=246  Identities=29%  Similarity=0.399  Sum_probs=215.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++|++..  +..+.+++.+.++.++++|++|+++++++++++.+.+ 
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-   78 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-   78 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-
Confidence            5899999999999999999999999999999999998753  3445566678899999999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      |++|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.++...|++||+|
T Consensus        79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  158 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAA  158 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhcc
Confidence            89999999999998899999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +.+|+|+++.|++++|||||+|+||+++|++...........  .......|++|+.+|||+|++++||+|+.++|+|||
T Consensus       159 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~  236 (247)
T d2ew8a1         159 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFD--VLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQ  236 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHH--HHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCC
Confidence            999999999999999999999999999999977654333222  112233588999999999999999999999999999


Q ss_pred             EEEeCCCccCC
Q 024551          255 VISIDGGYTAG  265 (266)
Q Consensus       255 ~l~vdgG~~~~  265 (266)
                      +|.||||++.|
T Consensus       237 ~i~vDGG~~~h  247 (247)
T d2ew8a1         237 TLAVDGGMVRH  247 (247)
T ss_dssp             EEEESSSCCCC
T ss_pred             eEEECCCEecC
Confidence            99999999875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=4.8e-61  Score=402.09  Aligned_cols=248  Identities=29%  Similarity=0.434  Sum_probs=230.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++|+. +.++++++++++.+.++.++++|++|+++++++++++.+++
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            69999999999999999999999999999999999974 57888999999988999999999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCC-eEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||+....++.+.+.++|++.+++|+.++++++|+++|+|.+++.| +||++||.++..+.|+...|++||
T Consensus        84 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asK  162 (261)
T d1geea_          84 -GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK  162 (261)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCC
Confidence             899999999999988899999999999999999999999999999999887754 599999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +|+++|+|+++.||+++|||||+|+||+++|++........  ..........|++|+++|||+|++++||+|+.++|+|
T Consensus       163 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~--~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~it  240 (261)
T d1geea_         163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP--EQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVT  240 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSH--HHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             ccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCH--HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999999876543322  2335667789999999999999999999999999999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      ||+|.||||+++.
T Consensus       241 G~~i~vDGG~sl~  253 (261)
T d1geea_         241 GITLFADGGMTLY  253 (261)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CCeEEECCCeeCC
Confidence            9999999999874

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.3e-60  Score=397.45  Aligned_cols=254  Identities=55%  Similarity=0.928  Sum_probs=232.6

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +|+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+..++++.+|++++++++++++++.+.
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      +++++|+||||||.....++.+.+.++|++++++|+.++++++++++|.|.+++.|+||+++|..+..+.+....|+++|
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  160 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK  160 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHH
Confidence            86789999999999988999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch--hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL--LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      +|+++|+|.+++||+++|||||+|+||+++|++........  .......+....|++|+++|||+|++++||+|++++|
T Consensus       161 ~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~  240 (258)
T d1ae1a_         161 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY  240 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence            99999999999999999999999999999999987654432  2344567777899999999999999999999999999


Q ss_pred             ccccEEEeCCCccCCC
Q 024551          251 ITGQVISIDGGYTAGN  266 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~~  266 (266)
                      +|||.|.||||++.++
T Consensus       241 itG~~i~vDGG~s~~g  256 (258)
T d1ae1a_         241 ITGQIIWADGGFTANG  256 (258)
T ss_dssp             CCSCEEEESTTGGGCS
T ss_pred             CcCcEEEeCCCeeccC
Confidence            9999999999999864

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=8e-61  Score=400.26  Aligned_cols=250  Identities=28%  Similarity=0.384  Sum_probs=229.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.  +.++.++++|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999988765  457899999999999999999999999


Q ss_pred             cCCcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           93 FDGKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      + |++|+||||||+.. .+++++.+.++|++.+++|+.++|+++|+++|.|++++.|+||++||..+..+.|+...|++|
T Consensus        81 ~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          81 F-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             H-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             h-CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence            9 89999999999864 567889999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc----chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN----DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |+|+.+|+|+++.|++++|||||+|+||+++|+|......    ..............|++|+++|||+|++++||+|+.
T Consensus       160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~  239 (258)
T d1iy8a_         160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999998654322    112333456677889999999999999999999999


Q ss_pred             CCCccccEEEeCCCccCC
Q 024551          248 ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~~  265 (266)
                      ++|+|||+|.||||++.+
T Consensus       240 s~~itG~~i~VDGG~saa  257 (258)
T d1iy8a_         240 ASYVNATVVPIDGGQSAA  257 (258)
T ss_dssp             GTTCCSCEEEESTTTTTB
T ss_pred             hcCCcCceEEcCcchhcc
Confidence            999999999999999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.3e-60  Score=399.83  Aligned_cols=248  Identities=31%  Similarity=0.429  Sum_probs=220.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC-hhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+. +.++.++++|++|+++++++++++.+.+
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999996 56788888887654 6789999999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       |++|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||+++|..+..+.|++..|++||+
T Consensus        82 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1x1ta1          82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             -CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence             8999999999999889999999999999999999999999999999999998999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhH--------HHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV--------QEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      |+++|+|+++.|++++|||||+|+||+++|++..........        ..........|++|+++|||+|++++||||
T Consensus       161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S  240 (260)
T d1x1ta1         161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999997665432111        111234567899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccC
Q 024551          246 PAASYITGQVISIDGGYTA  264 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~  264 (266)
                      +.++|+|||.|.||||++.
T Consensus       241 ~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         241 DAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             hhhCCCcCCEEEECcchhc
Confidence            9999999999999999974

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.7e-60  Score=392.67  Aligned_cols=241  Identities=28%  Similarity=0.382  Sum_probs=222.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     ++++++||++|+++++++++++.+++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            5689999999999999999999999999999999999999988877754     46688999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                       +++|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|.|++++.+.|+++|| .+..+.++...|++||+
T Consensus        76 -g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKa  153 (242)
T d1ulsa_          76 -GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMA  153 (242)
T ss_dssp             -SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHH
T ss_pred             -CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHH
Confidence             7899999999999889999999999999999999999999999999999888777777766 45778899999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      |+++|+|+++.||+++|||||+|+||+++|++.....+    ..........|++|+.+|||+|++++||+|++++|+||
T Consensus       154 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~----~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG  229 (242)
T d1ulsa_         154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE----KVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITG  229 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH----HHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH----HHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCC
Confidence            99999999999999999999999999999999876432    22356677899999999999999999999999999999


Q ss_pred             cEEEeCCCccCC
Q 024551          254 QVISIDGGYTAG  265 (266)
Q Consensus       254 ~~l~vdgG~~~~  265 (266)
                      |+|.||||++++
T Consensus       230 ~~i~vDGG~t~g  241 (242)
T d1ulsa_         230 QVLFVDGGRTIG  241 (242)
T ss_dssp             CEEEESTTTTTT
T ss_pred             cEEEECCCccCC
Confidence            999999999986

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.5e-60  Score=392.79  Aligned_cols=238  Identities=32%  Similarity=0.423  Sum_probs=224.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .|+||+++||||++|||+++|++|+++|++|++++|++++++++++++.   .++.++++|++|+++++++++++.+.+ 
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   78 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF-   78 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh-
Confidence            5899999999999999999999999999999999999999998888774   478899999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||....+++.+.+.++|++.+++|+.++|+++|.++|.|++++.|+||++||..+..+.++...|+++|+|
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  158 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA  158 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHH
Confidence            78999999999998999999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++|+|+++.||+++|||||+|+||+++|++.....+.         ..+.|++|+.+|||+|++++||+|++++|+|||
T Consensus       159 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---------~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~  229 (244)
T d1nffa_         159 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED---------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGA  229 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT---------CSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH---------HHhccccCCCCHHHHHHHHHHHhChhhCCCcCC
Confidence            99999999999999999999999999999987554322         235799999999999999999999999999999


Q ss_pred             EEEeCCCccCC
Q 024551          255 VISIDGGYTAG  265 (266)
Q Consensus       255 ~l~vdgG~~~~  265 (266)
                      +|.||||++.+
T Consensus       230 ~i~vDGG~~ag  240 (244)
T d1nffa_         230 EFVVDGGTVAG  240 (244)
T ss_dssp             EEEESTTGGGS
T ss_pred             EEEECCCeecc
Confidence            99999999865

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.5e-60  Score=398.78  Aligned_cols=246  Identities=28%  Similarity=0.442  Sum_probs=228.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .||++|||||++|||+++|++|+++|++|++++|+++.++++++++++.+.++.++++|++|+++++++++++.+.+ ++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~   79 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GP   79 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            38999999999999999999999999999999999999999999999988899999999999999999999999999 89


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHH--HHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPL--LKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|+  |.+++.|+||+++|..+..+.++...|++||+|
T Consensus        80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaa  159 (257)
T d2rhca1          80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG  159 (257)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHH
Confidence            999999999998899999999999999999999999999999997  566677999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-------chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-------DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      +.+|+|+++.|++++|||||+|+||+++|+|.....+       ....+...++....|++|+++|||+|++++||+|+.
T Consensus       160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~  239 (257)
T d2rhca1         160 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG  239 (257)
T ss_dssp             HHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999998654321       112334466778899999999999999999999999


Q ss_pred             CCCccccEEEeCCCcc
Q 024551          248 ASYITGQVISIDGGYT  263 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~  263 (266)
                      ++|+|||.|.||||.+
T Consensus       240 s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         240 AAAVTAQALNVCGGLG  255 (257)
T ss_dssp             GTTCCSCEEEESTTCC
T ss_pred             hcCCcCceEEECcCcc
Confidence            9999999999999975

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3.3e-60  Score=396.35  Aligned_cols=248  Identities=27%  Similarity=0.364  Sum_probs=226.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |+|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++   +.++.++++|++|+++++++++++.+++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999999999999888877   5688999999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|.|.++ +.|+||++||..+..+.++...|++||
T Consensus        78 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T d1k2wa_          78 -GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK  156 (256)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence             899999999999988999999999999999999999999999999986554 479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-------hHHHHHHHHhcCCCCCCCCccchHHHHHHHhc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-------LVQEYVKLIAKTPLARSAEPNEISPLVAFLCL  245 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s  245 (266)
                      +|+++|+|+++.||+++|||||+|+||+++|++........       ..+.........|++|+++|+|+|++++||+|
T Consensus       157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S  236 (256)
T d1k2wa_         157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLAT  236 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTS
T ss_pred             hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999865332111       11223455677899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCccCC
Q 024551          246 PAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       246 ~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ++++|+|||.|.||||.+++
T Consensus       237 ~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         237 PEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             GGGTTCCSCEEEESTTSSCC
T ss_pred             chhCCccCceEEECcchhhC
Confidence            99999999999999999874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=8e-60  Score=394.86  Aligned_cols=246  Identities=28%  Similarity=0.416  Sum_probs=227.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++++++++.+.++.+++||++|+++++++++++.+.+ 
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            5899999999999999999999999999999999999999999999999988899999999999999999999999999 


Q ss_pred             CcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      |++|+||||||... .+++.+.+.++|++.+++|+.++++++|+++|.|.+++.|+||++||..+..+.|+...|++||+
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  160 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence            88999999999874 47899999999999999999999999999999999988999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC------------ccchhHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD------------LNDLLVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      |+++|+|+++.|++++|||||+|+||+++|++....            ...........+....|++|+++|||+|++++
T Consensus       161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  240 (260)
T d1zema1         161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA  240 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999875321            11112223355677899999999999999999


Q ss_pred             HHhcCCCCCccccEEEeCCC
Q 024551          242 FLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~vdgG  261 (266)
                      ||+|+.++|+|||.|.||||
T Consensus       241 fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         241 FLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESCC
T ss_pred             HHhCchhcCccCCeEEeCCC
Confidence            99999999999999999998

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=6.2e-60  Score=394.60  Aligned_cols=246  Identities=28%  Similarity=0.349  Sum_probs=226.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++++++++.+.++.+++||++|+++++++++++.+.+ |++|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence            789999999999999999999999999999999999999999999988999999999999999999999999999 8999


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      +||||||+...+++.+.+.++|++.+++|+.++++++|+++|+|.+++ .++||++||..+..+.|+...|++||+|+++
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  160 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  160 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence            999999999889999999999999999999999999999999887664 6789999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch-------hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL-------LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      |+|+++.||+++|||||+|+||+++|++........       .......+....|++|+++|||+|++++||+|++++|
T Consensus       161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  240 (255)
T d1gega_         161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY  240 (255)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            999999999999999999999999999865432211       1122345667899999999999999999999999999


Q ss_pred             ccccEEEeCCCccCC
Q 024551          251 ITGQVISIDGGYTAG  265 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~  265 (266)
                      +|||.|.||||+.++
T Consensus       241 itG~~i~vDGG~~~n  255 (255)
T d1gega_         241 MTGQSLLIDGGMVFN  255 (255)
T ss_dssp             CCSCEEEESSSSSCC
T ss_pred             ccCcEEEecCCEEeC
Confidence            999999999999864

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.4e-60  Score=397.42  Aligned_cols=243  Identities=29%  Similarity=0.392  Sum_probs=224.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++++++   +.++.++++|++|+++++++++++.+++ 
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc-
Confidence            589999999999999999999999999999999999999888777765   5678999999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||+....++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.++...|++||+|
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  157 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence            78999999999998899999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCC-CccchHHHHHHHhcCCCCCccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSA-EPNEISPLVAFLCLPAASYITG  253 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eia~~~~~l~s~~~~~~~G  253 (266)
                      +.+|+|+++.|++++|||||+|+||+++|++.........    .......|++|++ +|||+|++++||+|++++|+||
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~----~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG  233 (254)
T d1hdca_         158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQG----EGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTG  233 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCS----TTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHH----HHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCC
Confidence            9999999999999999999999999999987644322211    2334568999997 6999999999999999999999


Q ss_pred             cEEEeCCCccCC
Q 024551          254 QVISIDGGYTAG  265 (266)
Q Consensus       254 ~~l~vdgG~~~~  265 (266)
                      |+|.||||++.+
T Consensus       234 ~~i~vDGG~t~g  245 (254)
T d1hdca_         234 AELAVDGGWTTG  245 (254)
T ss_dssp             CEEEESTTTTTS
T ss_pred             ceEEeCCCccCC
Confidence            999999999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6e-60  Score=391.84  Aligned_cols=241  Identities=29%  Similarity=0.407  Sum_probs=225.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +++|||||++|||+++|++|+++|++|++. .|+++.++++.+++++.+.++.++++|++|+++++++++++.+++ +++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            589999999999999999999999999886 678888999999999888999999999999999999999999999 899


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHH
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQ  177 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~  177 (266)
                      |+||||||....+++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.++...|++||+|+.+
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  160 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence            99999999998899999999999999999999999999999999999889999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh-cCCCCCccccEE
Q 024551          178 LTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC-LPAASYITGQVI  256 (266)
Q Consensus       178 ~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~-s~~~~~~~G~~l  256 (266)
                      |+|+++.||+++|||||+|+||+++|++.....+    ...+......|++|+.+|||+|++++||+ |+.++|+|||+|
T Consensus       161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~----~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i  236 (244)
T d1edoa_         161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGE----DMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAF  236 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH----HHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEE
T ss_pred             ChHHHHHHHhhhCcEEEEEecceeccHHHHHhhH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeE
Confidence            9999999999999999999999999998665422    22355677899999999999999999996 899999999999


Q ss_pred             EeCCCccC
Q 024551          257 SIDGGYTA  264 (266)
Q Consensus       257 ~vdgG~~~  264 (266)
                      .||||+++
T Consensus       237 ~vdGG~si  244 (244)
T d1edoa_         237 TIDGGIAI  244 (244)
T ss_dssp             EESTTTTC
T ss_pred             EeCCCeeC
Confidence            99999975

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=9.2e-60  Score=392.43  Aligned_cols=245  Identities=32%  Similarity=0.454  Sum_probs=226.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.. +.++.++++|++|+++++++++++.+.+ 
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF-   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            38999999999999999999999999999999999999999999998864 4589999999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCC-eEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNA-SIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      |++|+||||||....+++.+.+.++|++.+++|+.++|+++|+++|+|++++.| +||++||..+..+.|....|++||+
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa  160 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence            899999999999988999999999999999999999999999999999988754 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--hccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          174 AINQLTKNLACE--WATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       174 al~~~~~~~a~e--l~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+.+|+|+++.|  ++++|||||+|+||+++|++.......+   +........|++|+++|||+|++++||+|++++|+
T Consensus       161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~i  237 (251)
T d1zk4a1         161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE---EAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA  237 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH---HHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH---HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence            999999999998  5689999999999999999876544322   22344566899999999999999999999999999


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      |||.|.||||++.
T Consensus       238 tG~~i~vDGG~ta  250 (251)
T d1zk4a1         238 TGSEFVVDGGYTA  250 (251)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCcEEEECccccc
Confidence            9999999999974

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1e-59  Score=391.19  Aligned_cols=244  Identities=34%  Similarity=0.445  Sum_probs=218.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.. +..+++     ...++++|++|+++++++++++.+.+ 
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~-   74 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI-----GGAFFQVDLEDERERVRFVEEAAYAL-   74 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhc-
Confidence            37999999999999999999999999999999999998764 344443     24568999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      |+||+||||||+..++++.+.+.++|++.+++|+.++|+++|+++|+|++++.|+||+++|..+..+.++...|++||+|
T Consensus        75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  154 (248)
T d2d1ya1          75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  154 (248)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence            89999999999998999999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccch--hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL--LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++|+|+++.||+++|||||+|+||+++|++........  ............|++|+++|||+|++++||+|+.++|+|
T Consensus       155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~it  234 (248)
T d2d1ya1         155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT  234 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence            999999999999999999999999999998765432211  112224556778999999999999999999999999999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      ||.|.||||++.+
T Consensus       235 G~~i~vDGG~tas  247 (248)
T d2d1ya1         235 GAILPVDGGMTAS  247 (248)
T ss_dssp             SCEEEESTTGGGB
T ss_pred             CcEEEcCcCcccc
Confidence            9999999999863

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-60  Score=391.62  Aligned_cols=244  Identities=30%  Similarity=0.430  Sum_probs=221.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++    .++.++++|++|+++++++++++.+++ 
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~-   77 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF-   77 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc-
Confidence            579999999999999999999999999999999999999888877765    457889999999999999999999999 


Q ss_pred             CcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHH
Q 024551           95 GKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKG  173 (266)
Q Consensus        95 ~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~  173 (266)
                      +++|+||||||... ..++++.+.++|++.+++|+.++++++|+++|+|++++ |+||++||..+..+.++...|+++|+
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asKa  156 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKG  156 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHHh
Confidence            88999999999764 56788899999999999999999999999999998764 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc--chhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN--DLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+.+|+|+++.|++++|||||+|+||+|+|++......  ........+.....|++|+++|||+|++++||+|+ ++|+
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~i  235 (250)
T d1ydea1         157 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFC  235 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTC
T ss_pred             hHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCC
Confidence            99999999999999999999999999999987643211  12233445666778999999999999999999997 7899


Q ss_pred             cccEEEeCCCccCC
Q 024551          252 TGQVISIDGGYTAG  265 (266)
Q Consensus       252 ~G~~l~vdgG~~~~  265 (266)
                      |||+|.||||++++
T Consensus       236 tG~~i~vDGG~~lG  249 (250)
T d1ydea1         236 TGIELLVTGGAELG  249 (250)
T ss_dssp             CSCEEEESTTTTSC
T ss_pred             cCCeEEECCCcccC
Confidence            99999999999986

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.8e-58  Score=388.41  Aligned_cols=250  Identities=26%  Similarity=0.365  Sum_probs=224.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++++++... +.+.+++||++|+++++++++++.+++ 
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKH-   80 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-CceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            489999999999999999999999999999999999999999999998654 457889999999999999999999999 


Q ss_pred             CcccEEEecccccccc--CCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc-hhhhhh
Q 024551           95 GKLNILVNNAALVVMK--RATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL-SAYAAS  171 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~-~~y~~s  171 (266)
                      +++|++|||||.....  .+.+.+.++|++++++|+.++++++|+++|+|.+++.|+||+++|..+..+.++. ..|++|
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as  160 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  160 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence            8999999999986543  5788899999999999999999999999999999989999999999998876664 589999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHH-HHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ-EYVKLIAKTPLARSAEPNEISPLVAFLCLPAASY  250 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~  250 (266)
                      |+|+++|+|+++.||+++|||||+|+||+++|++........... +........|++|+.+|||||++++||+|++++|
T Consensus       161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~  240 (268)
T d2bgka1         161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  240 (268)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCC
Confidence            999999999999999999999999999999999988765443322 1122334468899999999999999999999999


Q ss_pred             ccccEEEeCCCccCCC
Q 024551          251 ITGQVISIDGGYTAGN  266 (266)
Q Consensus       251 ~~G~~l~vdgG~~~~~  266 (266)
                      +|||.|.||||++..+
T Consensus       241 itGq~i~VDGG~t~~~  256 (268)
T d2bgka1         241 VSGLNLVIDGGYTRTN  256 (268)
T ss_dssp             CCSCEEEESTTGGGCC
T ss_pred             ccCceEEECcCcccCC
Confidence            9999999999999864

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.8e-59  Score=387.27  Aligned_cols=236  Identities=28%  Similarity=0.411  Sum_probs=209.7

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +++++||++|||||++|||+++|++|+++|++|++++|+++.+           .++..+++|++|+++++++++++.+.
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence            4568999999999999999999999999999999999987643           35778999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|+||||||+...+++.+.+.++|++++++|+.++++++|.++|+|++++.|+||++||..+..+.++...|++||
T Consensus        71 ~-g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  149 (237)
T d1uzma1          71 Q-GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK  149 (237)
T ss_dssp             H-SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred             c-CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHH
Confidence            9 799999999999988999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +|+++|+|+++.|++++|||||+|+||+++|++..... +   ..........|++|+.+|||+|++++||+|++++|+|
T Consensus       150 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-~---~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~it  225 (237)
T d1uzma1         150 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD-E---RIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYIS  225 (237)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC-H---HHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC-H---HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999999865432 1   2224567789999999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      ||+|.||||.++
T Consensus       226 G~~i~vdGG~~m  237 (237)
T d1uzma1         226 GAVIPVDGGMGM  237 (237)
T ss_dssp             SCEEEESTTTTC
T ss_pred             CCeEEECCCCCC
Confidence            999999999875

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.2e-59  Score=384.54  Aligned_cols=241  Identities=32%  Similarity=0.418  Sum_probs=218.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++    ..+.++.+|++|+++++++++    ++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~----~~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH----Hc
Confidence            5799999999999999999999999999999999999999888877765    357788999999999877664    45


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh-cCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA-SGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||+...+++.+.+.++|++.+++|+.++++++|.+.|.|.+ +..|+||+++|..+..+.|+...|+++|
T Consensus        73 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  151 (242)
T d1cyda_          73 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  151 (242)
T ss_dssp             -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence             78999999999998899999999999999999999999999999998654 4578999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +|+.+|+|+++.|++++|||||+|+||+++|++.......+  +.........|++|+++|||+|++++||+|++++|+|
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~it  229 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADP--EFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTS  229 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCH--HHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcC
Confidence            99999999999999999999999999999999866544332  2235566779999999999999999999999999999


Q ss_pred             ccEEEeCCCccCC
Q 024551          253 GQVISIDGGYTAG  265 (266)
Q Consensus       253 G~~l~vdgG~~~~  265 (266)
                      ||.|.|||||+.+
T Consensus       230 G~~i~vDGG~~as  242 (242)
T d1cyda_         230 GGGILVDAGYLAS  242 (242)
T ss_dssp             SSEEEESTTGGGC
T ss_pred             CceEEeCcchhcc
Confidence            9999999999853

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.4e-58  Score=385.93  Aligned_cols=248  Identities=31%  Similarity=0.456  Sum_probs=212.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .++||++|||||++|||+++|++|+++|++|++++|+++.++++++++.+.+   .++.++++|++|+++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999998764   3689999999999999999999999


Q ss_pred             hcCCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC-CCCCCCCch
Q 024551           92 VFDGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA-GAISIPRLS  166 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~-~~~~~~~~~  166 (266)
                      ++ +++|+||||||...+    ..+.+.+.|+|++.+++|+.++++++|+++|+|++++ |.+|+++|.. +..+.|...
T Consensus        82 ~~-g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~  159 (264)
T d1spxa_          82 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP  159 (264)
T ss_dssp             HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred             Hh-CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCch
Confidence            99 899999999998643    3455678999999999999999999999999998875 6666666654 577999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-----hhHHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-----LLVQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      .|++||+|+++|+|+++.||+++|||||+|+||+++|++.......     .............|++|+++|||+|++++
T Consensus       160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  239 (264)
T d1spxa_         160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999999987654322     12223345567799999999999999999


Q ss_pred             HHhcC-CCCCccccEEEeCCCccC
Q 024551          242 FLCLP-AASYITGQVISIDGGYTA  264 (266)
Q Consensus       242 ~l~s~-~~~~~~G~~l~vdgG~~~  264 (266)
                      ||+|+ .++|+|||.|.||||+++
T Consensus       240 fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         240 FLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhCCcccCCccCceEEeCCChhh
Confidence            99995 489999999999999987

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-58  Score=392.61  Aligned_cols=250  Identities=30%  Similarity=0.466  Sum_probs=228.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-----CCeeEEEeccCCCHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-----GFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      -.|+||++|||||++|||+++|++|+++|++|++++|+++.+++.++++...     +.++.++++|++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            3489999999999999999999999999999999999999999999998753     56899999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      +.+.+ +++|+||||||....+++.+.+.++|++.+++|+.++++++|+++|.|.+++.|+||++|+ .+..+.|....|
T Consensus        88 ~~~~~-G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y  165 (297)
T d1yxma1          88 TLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHS  165 (297)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHH
T ss_pred             HHHHh-CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccc
Confidence            99999 7899999999998889999999999999999999999999999999999988899999866 456778899999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+|+++|+|++|.||+++|||||+|+||+|+|++....................|++|+++|||||++++||+|+.+
T Consensus       166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s  245 (297)
T d1yxma1         166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA  245 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999987665443333333455677899999999999999999999999


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      +|+|||+|.||||+++.
T Consensus       246 ~~iTG~~i~VDGG~sl~  262 (297)
T d1yxma1         246 SFITGQSVDVDGGRSLY  262 (297)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             cCcCCcEEEeCcChhhh
Confidence            99999999999999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-58  Score=381.29  Aligned_cols=240  Identities=28%  Similarity=0.405  Sum_probs=218.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +.++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.    .+..+++|++|+++++++++    ++
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~~   74 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hh
Confidence            45899999999999999999999999999999999999999988887653    47788999999999887764    45


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHH-HhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLL-KASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m-~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                       +++|+||||||....+++.+.+.++|++.+++|+.+++++++.++|.| ++++.|+||+++|..+..+.|....|++||
T Consensus        75 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK  153 (244)
T d1pr9a_          75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK  153 (244)
T ss_dssp             -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             -CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhH
Confidence             789999999999989999999999999999999999999999999975 455679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +|+++|+|+++.||+++|||||+|+||+++|++.........  .........|++|+.+|||+|++++||+|+.++|+|
T Consensus       154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~--~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~it  231 (244)
T d1pr9a_         154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH--KAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT  231 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHH--HHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChH--HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcC
Confidence            999999999999999999999999999999998766544432  335667789999999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      ||.|.|||||+.
T Consensus       232 G~~i~vDGG~~A  243 (244)
T d1pr9a_         232 GSTLPVEGGFWA  243 (244)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECccHhh
Confidence            999999999973

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.6e-58  Score=386.66  Aligned_cols=249  Identities=29%  Similarity=0.397  Sum_probs=219.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+   .++.+++||++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999998764   4689999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCC----CCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEec-CCCCCCCCCch
Q 024551           92 VFDGKLNILVNNAALVVMKRA----TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSS-VAGAISIPRLS  166 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss-~~~~~~~~~~~  166 (266)
                      ++ +++|+||||||...+.++    .+.+.++|++.+++|+.++++++|+++|.|++++ |.+|+++| .++..+.++..
T Consensus        82 ~~-g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~  159 (272)
T d1xkqa_          82 QF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFL  159 (272)
T ss_dssp             HH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSH
T ss_pred             Hh-CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcc
Confidence            99 899999999998765544    4567889999999999999999999999998875 55555554 66788999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-----HHHHHHHHhcCCCCCCCCccchHHHHH
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-----VQEYVKLIAKTPLARSAEPNEISPLVA  241 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~eia~~~~  241 (266)
                      .|++||+|+.+|+|+++.||+++|||||+|+||+|+|+|.........     ...........|++|+++|||+|++++
T Consensus       160 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~  239 (272)
T d1xkqa_         160 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999998765433322     112233345689999999999999999


Q ss_pred             HHhcCC-CCCccccEEEeCCCccCC
Q 024551          242 FLCLPA-ASYITGQVISIDGGYTAG  265 (266)
Q Consensus       242 ~l~s~~-~~~~~G~~l~vdgG~~~~  265 (266)
                      ||+|++ +.|+|||.|.||||+++.
T Consensus       240 fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         240 FLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHhCcchhCCccCeEEEeCcCHHHh
Confidence            999965 579999999999999873

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.7e-57  Score=380.87  Aligned_cols=247  Identities=34%  Similarity=0.419  Sum_probs=223.2

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES-KGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .|+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+ .+.++.++++|++|+++++++++++.+
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999999998888754 477899999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh-cCCCeEEEEecCCCCC-------CCC
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA-SGNASIVFMSSVAGAI-------SIP  163 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~vss~~~~~-------~~~  163 (266)
                      .+ +++|+||||||+...+++.+.+.++|++.+++|+.+++++++.+.|+|.+ +..++|++++|.....       +.+
T Consensus        84 ~~-g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~  162 (260)
T d1h5qa_          84 DL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL  162 (260)
T ss_dssp             HS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred             Hh-CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCc
Confidence            99 89999999999998899999999999999999999999999999999864 4567788877766543       335


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHH
Q 024551          164 RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      +...|+++|+|+.+|+|+++.|++++|||||+|+||+++|++.....+    ..........|++|+++|||+|++++||
T Consensus       163 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~----~~~~~~~~~~pl~R~g~pedvA~~v~fL  238 (260)
T d1h5qa_         163 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK----KIRDHQASNIPLNRFAQPEEMTGQAILL  238 (260)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH----HHHHHHHHTCTTSSCBCGGGGHHHHHHH
T ss_pred             cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999998765422    2235567789999999999999999999


Q ss_pred             hcCCCCCccccEEEeCCCccC
Q 024551          244 CLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      +|++++|+|||.|.||||+++
T Consensus       239 ~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         239 LSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             HSGGGTTCCSCEEEECTTGGG
T ss_pred             hcchhCCCcCceEEECCCeec
Confidence            999999999999999999975

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.7e-58  Score=385.01  Aligned_cols=245  Identities=28%  Similarity=0.371  Sum_probs=221.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++++++   +.++.++++|++|+++++++++++.+++ 
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-   78 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh-
Confidence            489999999999999999999999999999999999999999888887   4578899999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|+||||||....+++.+.+.++|++.+++|+.++|+++|+++|+|+++ .|+||++||..+..+.++...|++||+|
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaa  157 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHH
Confidence            899999999999988899999999999999999999999999999999765 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccC--CcEEEEEecCcccCCCCCCCccchhHH-HHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          175 INQLTKNLACEWATD--SIRVNAVSPWAVNTQISPPDLNDLLVQ-EYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       175 l~~~~~~~a~el~~~--gi~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      +.+|+|+++.|++++  |||||+|+||+++|++.....+..... .........|++|+.+|||+|++++||+|++++|+
T Consensus       158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~i  237 (253)
T d1hxha_         158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM  237 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCC
Confidence            999999999999974  599999999999999865443332222 11222334578899999999999999999999999


Q ss_pred             cccEEEeCCCccC
Q 024551          252 TGQVISIDGGYTA  264 (266)
Q Consensus       252 ~G~~l~vdgG~~~  264 (266)
                      |||.|.||||++.
T Consensus       238 tG~~i~VDGG~~~  250 (253)
T d1hxha_         238 SGSELHADNSILG  250 (253)
T ss_dssp             CSCEEEESSSCTT
T ss_pred             cCcEEEECccHhh
Confidence            9999999999874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1e-57  Score=384.89  Aligned_cols=250  Identities=28%  Similarity=0.376  Sum_probs=223.4

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .++||+++||||++|||+++|++|+++|++|++++|++++++++++++.+.+   .++.++++|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999999999998764   3689999999999999999999999


Q ss_pred             hcCCcccEEEecccccccc--CCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhh
Q 024551           92 VFDGKLNILVNNAALVVMK--RATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYA  169 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~  169 (266)
                      .+ |++|++|||||.....  ...+.+.++|++.+++|+.++|+++|+++|.|++++.|+|+++||.++..+.+++..|+
T Consensus        81 ~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~  159 (274)
T d1xhla_          81 KF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYA  159 (274)
T ss_dssp             HH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHH
T ss_pred             Hc-CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceeh
Confidence            99 8999999999976433  45567899999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhH-----HHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV-----QEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      +||+|+.+|+|+++.|++++|||||+|+||+++|++..........     ..........|++|+++|||||++++||+
T Consensus       160 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~  239 (274)
T d1xhla_         160 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA  239 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999976544332221     11122345579999999999999999999


Q ss_pred             cC-CCCCccccEEEeCCCccCC
Q 024551          245 LP-AASYITGQVISIDGGYTAG  265 (266)
Q Consensus       245 s~-~~~~~~G~~l~vdgG~~~~  265 (266)
                      |+ .++|+|||.|.||||+++-
T Consensus       240 S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         240 DRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             CHHHHTTCCSCEEEESTTGGGC
T ss_pred             CCccccCccCcEEEeCcCHHHh
Confidence            94 6899999999999999863

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=6.9e-57  Score=375.44  Aligned_cols=239  Identities=23%  Similarity=0.287  Sum_probs=217.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      |+|||||++|||+++|++|+++|++|++++|+.+.++++.+....      +.++|++|+++++++++++.++| |++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~-G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAY-GQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHH-SCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHc-CCCCE
Confidence            799999999999999999999999999999999888777654332      34689999999999999999999 89999


Q ss_pred             EEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHH
Q 024551          100 LVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAINQL  178 (266)
Q Consensus       100 lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~  178 (266)
                      ||||||+.. .+++.+.+.++|++.+++|+.++|+++|+++|+|++++.|+||++||..+..+.+....|++||+|+++|
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l  154 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  154 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence            999999764 5789999999999999999999999999999999999899999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCcEEEEEecCcccCCCCCCCccch----hHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          179 TKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDL----LVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       179 ~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +|+++.||+++|||||+|+||+++|++........    ..+.........|++|+++|||+|++++||+|+.++|+|||
T Consensus       155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~  234 (252)
T d1zmta1         155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ  234 (252)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTC
T ss_pred             HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            99999999999999999999999999987654432    22334566778999999999999999999999999999999


Q ss_pred             EEEeCCCccCC
Q 024551          255 VISIDGGYTAG  265 (266)
Q Consensus       255 ~l~vdgG~~~~  265 (266)
                      .|.||||+++.
T Consensus       235 ~i~vdGG~~~~  245 (252)
T d1zmta1         235 VFWLAGGFPMI  245 (252)
T ss_dssp             EEEESTTCCCC
T ss_pred             eEEECCCceeC
Confidence            99999999874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=2.5e-56  Score=376.64  Aligned_cols=246  Identities=27%  Similarity=0.356  Sum_probs=217.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++   +.++.++++|++++++++++++++.+++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999999999888877765   4578999999999999999999999999


Q ss_pred             CCcccEEEecccccccc-----CCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           94 DGKLNILVNNAALVVMK-----RATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                       +++|++|||||+....     ...+.+.++|++.+++|+.++++++|+++|.|++++ |+||+++|..+..+.++...|
T Consensus        78 -g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y  155 (276)
T d1bdba_          78 -GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLY  155 (276)
T ss_dssp             -SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHH
T ss_pred             -CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchH
Confidence             8999999999976432     234455678999999999999999999999998775 899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh------HHHHHHHHhcCCCCCCCCccchHHHHHH
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL------VQEYVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      ++||+|+.+|+|+++.||+++ ||||+|+||+|+|++..+......      ...........|++|+++|||+|++++|
T Consensus       156 ~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~f  234 (276)
T d1bdba_         156 TAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF  234 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999975 999999999999998765432211      1122455677899999999999999999


Q ss_pred             Hhc-CCCCCccccEEEeCCCccCC
Q 024551          243 LCL-PAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       243 l~s-~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |+| +.++|+|||.|.||||+++-
T Consensus       235 L~S~~~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         235 FATRGDAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             HHCHHHHTTCSSCEEEESSSGGGC
T ss_pred             HcCCcccCCeeCcEEEECcChhhc
Confidence            998 57899999999999999863

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.4e-56  Score=370.28  Aligned_cols=247  Identities=26%  Similarity=0.331  Sum_probs=213.3

Q ss_pred             ccCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .+|+||++|||||++  |||+++|++|+++|++|++++|+++..++.. ++...+++..++++|++|+++++++++++.+
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE-KLAEALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-HhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence            579999999999986  9999999999999999999999876655544 4444456778899999999999999999999


Q ss_pred             hcCCcccEEEecccccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh
Q 024551           92 VFDGKLNILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      .+ +++|+||||||...    ..++.+.+.++|++.+++|+.+++.+++.+.|+|++  .|+||+++|..+..+.|+...
T Consensus        83 ~~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~  159 (256)
T d1ulua_          83 AF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNV  159 (256)
T ss_dssp             HH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHH
T ss_pred             hc-CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchH
Confidence            99 88999999999763    345678899999999999999999999999999976  479999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++||+|+++|+|+++.||+++|||||+|+||+++|++.......+  ..........|++|+.+|||+|++++||+|++
T Consensus       160 Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~--~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  237 (256)
T d1ulua_         160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFT--KMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CH--HHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999876654332  23356677899999999999999999999999


Q ss_pred             CCCccccEEEeCCCccCCC
Q 024551          248 ASYITGQVISIDGGYTAGN  266 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~~~  266 (266)
                      ++|+|||.|.||||+++.+
T Consensus       238 s~~itG~~i~VDGG~~~~G  256 (256)
T d1ulua_         238 ASGITGEVVYVDAGYHIMG  256 (256)
T ss_dssp             GTTCCSCEEEESTTGGGBC
T ss_pred             hCCccCCeEEECcCEeCcC
Confidence            9999999999999999754

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=4.3e-56  Score=368.06  Aligned_cols=239  Identities=28%  Similarity=0.416  Sum_probs=211.5

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..++   .+.++.++++|++++++++++++++.+.+ 
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~i~~~~~~i~~~~-   77 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVADVSDPKAVEAVFAEALEEF-   77 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CCSSEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---cCCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            58999999999999999999999999999999999999877655554   46789999999999999999999999999 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +++|++|||||....+++.+.+.++|++++++|+.+++.++|+++|+|.++  +.|+++||. +..+.|++..|+++|+|
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~-a~~~~~~~~~Y~~sK~a  154 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSV-AGLGAFGLAHYAAGKLG  154 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCC-TTCCHHHHHHHHHCSSH
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccccc--cceeecccc-ccccccCccccchhhHH
Confidence            899999999999888999999999999999999999999999999988764  355555554 55566889999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcccc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQ  254 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~  254 (266)
                      +++|+|++++||+++|||||+|+||+++|++.....+    ...++.....|++|+.+|+|+|++++||+|+.++|+|||
T Consensus       155 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~----~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~  230 (241)
T d2a4ka1         155 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP----WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQ  230 (241)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH----HHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhH----hHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCc
Confidence            9999999999999999999999999999998765432    233556678999999999999999999999999999999


Q ss_pred             EEEeCCCccC
Q 024551          255 VISIDGGYTA  264 (266)
Q Consensus       255 ~l~vdgG~~~  264 (266)
                      +|.||||+++
T Consensus       231 ~i~vDGG~s~  240 (241)
T d2a4ka1         231 ALYVDGGRSI  240 (241)
T ss_dssp             EEEESTTTTT
T ss_pred             eEEeCCCccc
Confidence            9999999986

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.5e-55  Score=366.64  Aligned_cols=246  Identities=28%  Similarity=0.402  Sum_probs=220.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEe-cCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTC-GRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .|+||++|||||++|||+++|++|+++|++|+++ .|+++.++++.+++++.+.+++++++|++|+++++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999999999999986 567777899999999999999999999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhhhhhH
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAASK  172 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y~~sK  172 (266)
                       +++|++|||||....+++.+.+.++|++.+++|+.++++++|.++|+|+++  |++++++|..+. .+.+.+..|+++|
T Consensus        83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK  159 (259)
T d1ja9a_          83 -GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSK  159 (259)
T ss_dssp             -SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred             -CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHH
Confidence             789999999999988999999999999999999999999999999999764  577777666554 4789999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCC---------ccchhHHHHHHHHhcCCCCCCCCccchHHHHHHH
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPD---------LNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFL  243 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l  243 (266)
                      +|+++|+|+++.|++++|||||+|+||+++|++.+..         ................|++|+++|+|||++++||
T Consensus       160 ~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL  239 (259)
T d1ja9a_         160 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL  239 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999864321         1111122235567789999999999999999999


Q ss_pred             hcCCCCCccccEEEeCCCcc
Q 024551          244 CLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       244 ~s~~~~~~~G~~l~vdgG~~  263 (266)
                      +|++++|+||+.|.||||+.
T Consensus       240 ~S~~a~~itG~~i~vDGG~~  259 (259)
T d1ja9a_         240 CQEESEWINGQVIKLTGGGI  259 (259)
T ss_dssp             HSGGGTTCCSCEEEESTTCC
T ss_pred             hCchhcCCcCceEEeCCCCC
Confidence            99999999999999999973

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.6e-54  Score=365.21  Aligned_cols=253  Identities=27%  Similarity=0.445  Sum_probs=224.6

Q ss_pred             cCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC-hhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 024551            9 FGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD-QNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus         9 ~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   87 (266)
                      +.+...+|+||++|||||++|||+++|++|+++|++|++++|+ ++.++++++++++.+.++.++++|++|+++++++++
T Consensus         9 ~~~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~   88 (272)
T d1g0oa_           9 LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE   88 (272)
T ss_dssp             SSGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHH
Confidence            3446677999999999999999999999999999999998776 677888999999989999999999999999999999


Q ss_pred             HHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-CCCCch
Q 024551           88 TVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-SIPRLS  166 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-~~~~~~  166 (266)
                      ++.+.+ +++|++|||+|.....++.+.+.++|++.+++|+.++++++|+++|+|.++  |++++++|..+.. +.+...
T Consensus        89 ~~~~~~-g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~  165 (272)
T d1g0oa_          89 EAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHA  165 (272)
T ss_dssp             HHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCH
T ss_pred             HHHHHh-CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccccccchh
Confidence            999999 789999999999988899999999999999999999999999999999764  6888888876544 577788


Q ss_pred             hhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc---------chhHHHHHHHHhcCCCCCCCCccchH
Q 024551          167 AYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN---------DLLVQEYVKLIAKTPLARSAEPNEIS  237 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~eia  237 (266)
                      .|+++|+|+++|+|+++.||+++|||||+|+||+++|++......         ..............|++|+++|||||
T Consensus       166 ~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA  245 (272)
T d1g0oa_         166 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHH
Confidence            999999999999999999999999999999999999987432211         11111223456789999999999999


Q ss_pred             HHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          238 PLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       238 ~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ++++||+|+.++|+||+.|.||||+++
T Consensus       246 ~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         246 RVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHhCchhcCccCceEeECCCCCC
Confidence            999999999999999999999999875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.8e-55  Score=361.78  Aligned_cols=230  Identities=30%  Similarity=0.421  Sum_probs=207.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++       .+  ..++.||+++.      ++.+.+++ +
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~~--~~~~~~Dv~~~------~~~~~~~~-g   65 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SG--HRYVVCDLRKD------LDLLFEKV-K   65 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TC--SEEEECCTTTC------HHHHHHHS-C
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------cC--CcEEEcchHHH------HHHHHHHh-C
Confidence            789999999999999999999999999999999999865542       22  34678999864      34455666 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ++|+||||||....+++.+.+.++|++.+++|+.++++++|.++|.|++++.|+||+++|..+..+.+....|++||+|+
T Consensus        66 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal  145 (234)
T d1o5ia_          66 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL  145 (234)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence            89999999999888899999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccE
Q 024551          176 NQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQV  255 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~  255 (266)
                      .+|+|+++.|++++|||||+|+||+++|++......+..   ........|++|+.+|||+|++++||+|++++|+|||+
T Consensus       146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~---~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~  222 (234)
T d1o5ia_         146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEK---KKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQT  222 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHH---HHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHH---HHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcE
Confidence            999999999999999999999999999998765544322   24566789999999999999999999999999999999


Q ss_pred             EEeCCCccC
Q 024551          256 ISIDGGYTA  264 (266)
Q Consensus       256 l~vdgG~~~  264 (266)
                      |.||||++.
T Consensus       223 i~vDGG~s~  231 (234)
T d1o5ia_         223 IVVDGGLSK  231 (234)
T ss_dssp             EEESTTCCC
T ss_pred             EEECccccc
Confidence            999999975

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=7.7e-54  Score=354.13  Aligned_cols=230  Identities=23%  Similarity=0.288  Sum_probs=214.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCe-------EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGAS-------VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~-------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +++|||||++|||+++|++|+++|++       |++++|+++.++++.+++++.+.++.+++||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999998       89999999999999999999899999999999999999999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      ++ |++|+||||||....+++.+.+.++|++++++|+.++|+++|.++|+|++++.|+||++||.++..+.|+...|++|
T Consensus        82 ~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  160 (240)
T d2bd0a1          82 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  160 (240)
T ss_dssp             HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             Hc-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence            99 89999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCc
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYI  251 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~  251 (266)
                      |+|+.+|+|+++.|++++|||||+|+||+++|+|.....+.             ...++.+|||+|+.++||+++..+++
T Consensus       161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-------------~~~~~~~PedvA~~v~~l~s~~~~~~  227 (240)
T d2bd0a1         161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-------------MQALMMMPEDIAAPVVQAYLQPSRTV  227 (240)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-------------TGGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-------------hHhcCCCHHHHHHHHHHHHcCCccCc
Confidence            99999999999999999999999999999999997664322             12367899999999999999888888


Q ss_pred             ccc-EEEeCCCc
Q 024551          252 TGQ-VISIDGGY  262 (266)
Q Consensus       252 ~G~-~l~vdgG~  262 (266)
                      +|+ +|..+||-
T Consensus       228 ~~~~~i~p~~G~  239 (240)
T d2bd0a1         228 VEEIILRPTSGD  239 (240)
T ss_dssp             EEEEEEEETTCC
T ss_pred             cCCEEEEecCCC
Confidence            887 45577763

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-54  Score=360.01  Aligned_cols=239  Identities=26%  Similarity=0.362  Sum_probs=211.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++||++|||||++|||+++|++|+++|++|++++|++++++++.++     ..+....+|+.+.+.++...+    .+ +
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~-----~~~~~~~~d~~~~~~~~~~~~----~~-~   73 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-----PGIQTRVLDVTKKKQIDQFAN----EV-E   73 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS-----TTEEEEECCTTCHHHHHHHHH----HC-S
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-----cCCceeeeecccccccccccc----cc-c
Confidence            8999999999999999999999999999999999999887665442     356778889988776665544    44 7


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC-CCCCCchhhhhhHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA-ISIPRLSAYAASKGA  174 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~-~~~~~~~~y~~sK~a  174 (266)
                      ++|+||||+|....+++.+.+.++|++.+++|+.++++++|.+.|+|.+++.|+||+++|..+. .+.+....|+++|+|
T Consensus        74 ~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaa  153 (245)
T d2ag5a1          74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAA  153 (245)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHH
T ss_pred             cceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHH
Confidence            8999999999998899999999999999999999999999999999999989999999998775 578889999999999


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--hhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--LLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++|+|++|.|++++|||||+|+||+++|++.......  .............|++|+++|||+|+++.||++++++|+|
T Consensus       154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iT  233 (245)
T d2ag5a1         154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT  233 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCc
Confidence            99999999999999999999999999999886543221  1122235566789999999999999999999999999999


Q ss_pred             ccEEEeCCCccC
Q 024551          253 GQVISIDGGYTA  264 (266)
Q Consensus       253 G~~l~vdgG~~~  264 (266)
                      ||.|.||||+++
T Consensus       234 G~~i~VDGG~sl  245 (245)
T d2ag5a1         234 GNPVIIDGGWSL  245 (245)
T ss_dssp             SCEEEECTTGGG
T ss_pred             CceEEeCCCcCC
Confidence            999999999986

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=2.3e-53  Score=361.99  Aligned_cols=253  Identities=23%  Similarity=0.358  Sum_probs=224.3

Q ss_pred             CCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      |-++.+++||++|||||++|||+++|++|+++|++|++++|+.++++++++++.+. +.++.++++|++++++++++++.
T Consensus        17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~   96 (294)
T d1w6ua_          17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE   96 (294)
T ss_dssp             CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhh
Confidence            33447899999999999999999999999999999999999999999999887654 67899999999999999999999


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHh-cCCCeEEEEecCCCCCCCCCchh
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKA-SGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      +.+.+ +++|++|||||.....++.+.+.++|++.+.+|+.+.+.+.+...+.+.. +..+.+++++|..+..+.++...
T Consensus        97 ~~~~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~  175 (294)
T d1w6ua_          97 LIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP  175 (294)
T ss_dssp             HHHHT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHH
T ss_pred             hhhhc-cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccch
Confidence            99998 89999999999988888999999999999999999999999888777654 44677888899888889999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |+++|+|+++|+|.+|.|++++|||||+|+||+++|++........ ...........|++|+++|||+|++++||+|++
T Consensus       176 YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~  254 (294)
T d1w6ua_         176 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPT-GTFEKEMIGRIPCGRLGTVEELANLAAFLCSDY  254 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTT-SHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCc-HHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999876654332 223366777899999999999999999999999


Q ss_pred             CCCccccEEEeCCCccC
Q 024551          248 ASYITGQVISIDGGYTA  264 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~  264 (266)
                      ++|+|||+|.||||+++
T Consensus       255 s~~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         255 ASWINGAVIKFDGGEEV  271 (294)
T ss_dssp             GTTCCSCEEEESTTHHH
T ss_pred             hcCCCCcEEEECCChhh
Confidence            99999999999999864

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-54  Score=360.37  Aligned_cols=238  Identities=25%  Similarity=0.274  Sum_probs=211.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++++|++|+++++++++++.+.+
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999999999999998764  4589999999999999999999999999


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC---CCeEEEEecCCCCCCCCCchhhhh
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG---NASIVFMSSVAGAISIPRLSAYAA  170 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~~~~y~~  170 (266)
                       |++|+||||||....        ++|++.+++|+.+++++++.++|+|.+++   .|+||++||..+..+.++...|++
T Consensus        81 -G~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  151 (254)
T d2gdza1          81 -GRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  151 (254)
T ss_dssp             -SCCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             -CCcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence             799999999998643        34889999999999999999999997764   488999999999999999999999


Q ss_pred             hHHHHHHHHHH--HHHHhccCCcEEEEEecCcccCCCCCCCccchhH----HHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          171 SKGAINQLTKN--LACEWATDSIRVNAVSPWAVNTQISPPDLNDLLV----QEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       171 sK~al~~~~~~--~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      ||+|+.+|+|+  ++.|++++|||||+|+||+|+|+|..........    ..........|++|+.+|||+|++++||+
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  231 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI  231 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence            99999999997  6889999999999999999999987654332211    11234455678899999999999999999


Q ss_pred             cCCCCCccccEEEeCCCccC
Q 024551          245 LPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG~~~  264 (266)
                      |+.  ++|||.|.||||+++
T Consensus       232 s~~--~itG~~i~VdGG~~~  249 (254)
T d2gdza1         232 EDD--ALNGAIMKITTSKGI  249 (254)
T ss_dssp             HCT--TCSSCEEEEETTTEE
T ss_pred             cCC--CCCCCEEEECCCCee
Confidence            874  599999999999875

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-53  Score=353.63  Aligned_cols=244  Identities=25%  Similarity=0.282  Sum_probs=215.3

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      +-+++||++|||||++|||+++|++|+++|++|++++|++++++++++++++.+  .++.+++||++++++++++++++.
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            344999999999999999999999999999999999999999999999998865  589999999999999999999999


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--CCeEEEEecCCCCCCC--CCch
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--NASIVFMSSVAGAISI--PRLS  166 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~vss~~~~~~~--~~~~  166 (266)
                      +.+ +++|+||||||....+++.+.+.++|++.+++|+.++|++++.++|.|++++  .|+||+++|.++....  +...
T Consensus        85 ~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~  163 (257)
T d1xg5a_          85 SQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTH  163 (257)
T ss_dssp             HHH-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGH
T ss_pred             Hhc-CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccH
Confidence            999 8899999999999899999999999999999999999999999999998754  6899999999987544  4567


Q ss_pred             hhhhhHHHHHHHHHHHHHHh--ccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          167 AYAASKGAINQLTKNLACEW--ATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       167 ~y~~sK~al~~~~~~~a~el--~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      .|+++|+|+.+|+|+++.|+  +++|||||+|+||+++|++.....+.. .   .......|++|+.+|||+|++++||+
T Consensus       164 ~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~-~---~~~~~~~~~~r~~~pedvA~~v~fL~  239 (257)
T d1xg5a_         164 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD-P---EKAAATYEQMKCLKPEDVAEAVIYVL  239 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC-H---HHHHHHHC---CBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhh-H---HHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            79999999999999999998  788999999999999998765433221 1   34455679999999999999999999


Q ss_pred             cCCCCCccccEEEeCCC
Q 024551          245 LPAASYITGQVISIDGG  261 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG  261 (266)
                      ++.++|+|||++..++|
T Consensus       240 s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         240 STPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HSCTTEEEEEEEEEETT
T ss_pred             CChhcCeECCEEEEeCC
Confidence            99999999997444444

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4e-53  Score=360.69  Aligned_cols=233  Identities=22%  Similarity=0.348  Sum_probs=208.5

Q ss_pred             ccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC---------ChhHHHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 024551           12 KKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR---------DQNMINERIQEWESKGFKVTGSVCDLSFGDQR   82 (266)
Q Consensus        12 ~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i   82 (266)
                      ++|+++||++|||||++|||+++|++|+++|++|++++|         +.+.++++.+++...+.   ...+|++|.+++
T Consensus         1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~   77 (302)
T d1gz6a_           1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAG   77 (302)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGH
T ss_pred             CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhccc---ccccccchHHHH
Confidence            357899999999999999999999999999999999865         45667778888766543   456899999999


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI  162 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~  162 (266)
                      +++++++.+.+ |++|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.
T Consensus        78 ~~~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~  156 (302)
T d1gz6a_          78 EKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN  156 (302)
T ss_dssp             HHHHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC
Confidence            99999999999 89999999999999999999999999999999999999999999999999989999999999999999


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHH
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAF  242 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~  242 (266)
                      ++...|++||+|+.+|+|+++.|++++|||||+|+||++.|.+.... +.+             +.|..+|||+|++++|
T Consensus       157 ~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~-~~~-------------~~~~~~PedvA~~v~f  222 (302)
T d1gz6a_         157 FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM-PED-------------LVEALKPEYVAPLVLW  222 (302)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS-CHH-------------HHHHSCGGGTHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC-cHh-------------hHhcCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999987654332 221             1234679999999999


Q ss_pred             HhcCCCCCccccEEEeCCCcc
Q 024551          243 LCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       243 l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      |+|+.+ ++|||+|.|||||.
T Consensus       223 L~S~~a-~itG~~i~vdGG~~  242 (302)
T d1gz6a_         223 LCHESC-EENGGLFEVGAGWI  242 (302)
T ss_dssp             HTSTTC-CCCSCEEEEETTEE
T ss_pred             HcCCCc-CCCCcEEEeCCCce
Confidence            999765 79999999999985

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-49  Score=328.80  Aligned_cols=246  Identities=19%  Similarity=0.297  Sum_probs=215.4

Q ss_pred             cCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+.. +++....+....++.|+++..++.+.+.++.+.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            37999999999998  899999999999999999999996655444 444444567788899999999999999999999


Q ss_pred             cCCcccEEEeccccccccCC-----CCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh
Q 024551           93 FDGKLNILVNNAALVVMKRA-----TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      + +++|++|||++......+     +....+.|...+++|+.+.+.+++.+.|.|++  .+.||++||..+..+.|....
T Consensus        81 ~-~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~  157 (258)
T d1qsga_          81 W-PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNV  157 (258)
T ss_dssp             C-SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTH
T ss_pred             c-cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHH
Confidence            8 899999999998644333     34677889999999999999999999998865  458999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~  247 (266)
                      |++||+|+++|+|+++.||+++|||||+|+||+++|++........  ..........|++|+.+|||+|++++||+|+.
T Consensus       158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~  235 (258)
T d1qsga_         158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFR--KMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL  235 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHH--HHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhh--hHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999876543332  23356677899999999999999999999999


Q ss_pred             CCCccccEEEeCCCccCCC
Q 024551          248 ASYITGQVISIDGGYTAGN  266 (266)
Q Consensus       248 ~~~~~G~~l~vdgG~~~~~  266 (266)
                      ++|+|||+|.||||+++.+
T Consensus       236 s~~itG~~i~vDGG~~i~g  254 (258)
T d1qsga_         236 SAGISGEVVHVDGGFSIAA  254 (258)
T ss_dssp             GTTCCSCEEEESTTGGGBC
T ss_pred             hcCccCceEEECcCHHHhc
Confidence            9999999999999998753

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-49  Score=332.85  Aligned_cols=241  Identities=21%  Similarity=0.217  Sum_probs=209.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHH---CCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELAR---FGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~---~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .|+||+++||||++|||+++|++|++   +|++|++++|++++++++.+++...  +.++.+++||++|+++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            48899999999999999999999997   7999999999999999999999765  458999999999999999999998


Q ss_pred             Hhhc---CCcccEEEecccccc---ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC--CCeEEEEecCCCCCC
Q 024551           90 SSVF---DGKLNILVNNAALVV---MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG--NASIVFMSSVAGAIS  161 (266)
Q Consensus        90 ~~~~---~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~vss~~~~~~  161 (266)
                      .+..   .+.+|++|||||...   .+++.+.+.++|++++++|+.++++++|.++|+|++++  .|+||++||..+..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence            7742   257999999999753   45688899999999999999999999999999998765  589999999999999


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-hhHHHHHHHHhcCCCCCCCCccchHHHH
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-LLVQEYVKLIAKTPLARSAEPNEISPLV  240 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~eia~~~  240 (266)
                      .+++..|++||+|+++|+|+|+.|  .+|||||+|+||+|+|+|....... ........+....|.+|..+|+|+|+.+
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i  240 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL  240 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            999999999999999999999998  6799999999999999975432111 1112223444556789999999999999


Q ss_pred             HHHhcCCCCCccccEEEe
Q 024551          241 AFLCLPAASYITGQVISI  258 (266)
Q Consensus       241 ~~l~s~~~~~~~G~~l~v  258 (266)
                      +||+++ .+|+||++|.|
T Consensus       241 ~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         241 LGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHH-CCSCTTEEEET
T ss_pred             HHHhhh-ccCCCCCeEEe
Confidence            999986 57999999976

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-49  Score=325.88  Aligned_cols=219  Identities=25%  Similarity=0.299  Sum_probs=202.5

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +.+++||+++||||++|||+++|++|+++|++|++++|++++++++++++.+.+.+++++.||++|+++++++++++.+.
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999999999999998999999999999999999999999999


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                      + +++|++|||||......+.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||..+..+.|++..|++||
T Consensus        82 ~-g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  160 (244)
T d1yb1a_          82 I-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK  160 (244)
T ss_dssp             T-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             c-CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence            8 789999999999988889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcc---CCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          173 GAINQLTKNLACEWAT---DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       173 ~al~~~~~~~a~el~~---~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      +|+.+|+++++.|+++   +||+||+|+||+|+|++......              +..+..+|||+|+.++..+..
T Consensus       161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~--------------~~~~~~~pe~va~~i~~~~~~  223 (244)
T d1yb1a_         161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST--------------SLGPTLEPEEVVNRLMHGILT  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH--------------HHCCCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc--------------cccCCCCHHHHHHHHHHHHhc
Confidence            9999999999999976   58999999999999998765311              123567899999999876643

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.4e-49  Score=329.72  Aligned_cols=236  Identities=15%  Similarity=0.125  Sum_probs=197.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCC-CHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLS-FGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~-~~~~i~~~~~~~~~   91 (266)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.++.+++.+..... ..++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999988877766665544443 458999999998 67889999999999


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC---CCeEEEEecCCCCCCCCCchhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG---NASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      ++ ++||+||||||..        +.+.|++++++|+.++++++++++|.|.+++   .|+||+++|..+..+.+++..|
T Consensus        81 ~~-g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y  151 (254)
T d1sbya1          81 QL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             Hc-CCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence            99 7999999999964        4566999999999999999999999997653   5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      ++||+|+.+|+|+++.|++++|||||+|+||+|+|++.+.........  .........++..+||++|+.++++++.  
T Consensus       152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~~e~va~~~~~~~~~--  227 (254)
T d1sbya1         152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVE--PRVAELLLSHPTQTSEQCGQNFVKAIEA--  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSC--TTHHHHHTTSCCEEHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHH--HHHHhccccCCCCCHHHHHHHHHHhhhC--
Confidence            999999999999999999999999999999999998754432211111  0111112233456899999999888753  


Q ss_pred             CCccccEEEeCCCcc
Q 024551          249 SYITGQVISIDGGYT  263 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~  263 (266)
                       +.||++|.+|||++
T Consensus       228 -~~tG~vi~vdgG~l  241 (254)
T d1sbya1         228 -NKNGAIWKLDLGTL  241 (254)
T ss_dssp             -CCTTCEEEEETTEE
T ss_pred             -CCCCCEEEECCCEe
Confidence             36999999999974

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-48  Score=321.75  Aligned_cols=234  Identities=25%  Similarity=0.367  Sum_probs=203.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.+++.++++   +.......+|+.+.+.++.....+...+ 
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF-   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccc-
Confidence            689999999999999999999999999999999999999998888877   4578888999999999999999999888 


Q ss_pred             CcccEEEecccccc------ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc------CCCeEEEEecCCCCCCC
Q 024551           95 GKLNILVNNAALVV------MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS------GNASIVFMSSVAGAISI  162 (266)
Q Consensus        95 ~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~iv~vss~~~~~~~  162 (266)
                      ..+|.+++++++..      ..++.+.+.++|++.+++|+.++++++|++.|+|..+      +.|+||++||..+..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence            78999999987653      3455677899999999999999999999999998643      57899999999999999


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-CCCCCccchHHHHH
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLVA  241 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~eia~~~~  241 (266)
                      |++..|++||+|+++|+|+++.|++++|||||+|+||+++|++.....+.    .........|+ +|+++|||||++++
T Consensus       158 ~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~----~~~~~~~~~pl~~R~g~peevA~~v~  233 (248)
T d2o23a1         158 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK----VCNFLASQVPFPSRLGDPAEYAHLVQ  233 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSSSCSCBCHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH----HHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999987654322    12344556776 89999999999999


Q ss_pred             HHhcCCCCCccccEEEe
Q 024551          242 FLCLPAASYITGQVISI  258 (266)
Q Consensus       242 ~l~s~~~~~~~G~~l~v  258 (266)
                      ||++  ++|+|||+|.|
T Consensus       234 fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         234 AIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHH--CTTCCSCEEEE
T ss_pred             HHHh--CCCCCceEeEC
Confidence            9996  58999999986

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=9.3e-48  Score=325.36  Aligned_cols=240  Identities=25%  Similarity=0.323  Sum_probs=200.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhc-CCeeEE-----------------EeccCCCH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESK-GFKVTG-----------------SVCDLSFG   79 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~-~~~~~~-----------------~~~D~~~~   79 (266)
                      .++|||||++|||+++|++|+++|++|++++| +++.++++.+++.+. +.....                 +.+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            38999999999999999999999999998755 677788888888754 334444                 44669999


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHH--------------HHhccchhhHHHHHHHHHHHHH--
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYS--------------SVMSTNVESSYHLCQLAHPLLK--  143 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~m~--  143 (266)
                      ++++++++++.+.+ |++|+||||||...+.++.+.+.++|+              ..+++|+.++++++|.+.+.+.  
T Consensus        83 ~~v~~~~~~~~~~~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHh-CCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            99999999999999 899999999999887777776666554              5789999999999999988754  


Q ss_pred             ----hcCCCeEEEEecCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHH
Q 024551          144 ----ASGNASIVFMSSVAGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYV  219 (266)
Q Consensus       144 ----~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~  219 (266)
                          +.+.++||+++|.....+.++...|++||+|+++|+|+++.||+++|||||+|+||++.+...   ..   ....+
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~---~~---~~~~~  235 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD---MP---PAVWE  235 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG---SC---HHHHH
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc---CC---HHHHH
Confidence                334689999999999999999999999999999999999999999999999999998655321   11   22335


Q ss_pred             HHHhcCCC-CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          220 KLIAKTPL-ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       220 ~~~~~~~~-~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      ......|+ +|+++|||+|++++||+|++++|+|||+|.||||+++.
T Consensus       236 ~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         236 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            56677776 99999999999999999999999999999999999975

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.6e-47  Score=330.44  Aligned_cols=246  Identities=19%  Similarity=0.210  Sum_probs=203.5

Q ss_pred             CCCEEEEec--CCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc------------CCeeEEEe---------
Q 024551           17 RGMTALVTG--GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK------------GFKVTGSV---------   73 (266)
Q Consensus        17 ~~k~vlItG--as~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~---------   73 (266)
                      .+|++||||  +++|||+++|++|+++|++|++++++............+.            ......+.         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  6689999999999999999999998877655544433221            01112222         


Q ss_pred             -----------ccCCCHHHHHHHHHHHHhhcCCcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHHHHHH
Q 024551           74 -----------CDLSFGDQREKLIETVSSVFDGKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQLAHP  140 (266)
Q Consensus        74 -----------~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  140 (266)
                                 +|+++.++++++++++.+.| |+||+||||+|...  .+++.+.+.++|++.+++|++++++++|+++|
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHh-CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence                       46778889999999999999 89999999999764  35788999999999999999999999999999


Q ss_pred             HHHhcCCCeEEEEecCCCCCCCCC-chhhhhhHHHHHHHHHHHHHHhcc-CCcEEEEEecCcccCCCCCC----------
Q 024551          141 LLKASGNASIVFMSSVAGAISIPR-LSAYAASKGAINQLTKNLACEWAT-DSIRVNAVSPWAVNTQISPP----------  208 (266)
Q Consensus       141 ~m~~~~~g~iv~vss~~~~~~~~~-~~~y~~sK~al~~~~~~~a~el~~-~gi~v~~i~PG~v~t~~~~~----------  208 (266)
                      +|++  .|+||++||.++..+.|+ ...|+++|+|+++|+|+++.||++ +|||||+|+||+|+|+..+.          
T Consensus       160 ~m~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~  237 (329)
T d1uh5a_         160 IMKP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             GEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred             hccc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence            9965  479999999999998887 467999999999999999999986 69999999999999943211          


Q ss_pred             -------------------------------CccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEE
Q 024551          209 -------------------------------DLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVIS  257 (266)
Q Consensus       209 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~  257 (266)
                                                     .................|++|+.+|||||++++||+|+.++|+|||+|.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~  317 (329)
T d1uh5a_         238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEE
Confidence                                           0111222333556677899999999999999999999999999999999


Q ss_pred             eCCCccCC
Q 024551          258 IDGGYTAG  265 (266)
Q Consensus       258 vdgG~~~~  265 (266)
                      ||||+++-
T Consensus       318 VDGG~~~~  325 (329)
T d1uh5a_         318 VDNGLNIM  325 (329)
T ss_dssp             ESTTGGGC
T ss_pred             ECCCcccc
Confidence            99999764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-47  Score=322.86  Aligned_cols=235  Identities=20%  Similarity=0.231  Sum_probs=193.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEE---EecCChhH---HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVH---TCGRDQNM---INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~---~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .|+||||||++|||+++|++|+++|++|+   .+.|+.+.   +++..+++...+.++.+++||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            48899999999999999999999998854   45666544   4444455555678999999999999999999988754


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                         +++|++|||+|....+++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||.++..+.|+...|++|
T Consensus        82 ---g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~as  158 (285)
T d1jtva_          82 ---GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCAS  158 (285)
T ss_dssp             ---SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             ---cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHH
Confidence               68999999999998899999999999999999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh----------HHH---HHHHHhcCCCCCCCCccchHH
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL----------VQE---YVKLIAKTPLARSAEPNEISP  238 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~----------~~~---~~~~~~~~~~~~~~~~~eia~  238 (266)
                      |+|+++|+++++.|++++|||||+|+||+++|++.........          ...   ........+.++..+|||+|+
T Consensus       159 Kaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~  238 (285)
T d1jtva_         159 KFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE  238 (285)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHH
Confidence            9999999999999999999999999999999999876543211          111   111223345567889999999


Q ss_pred             HHHHHhcCC---CCCccccE
Q 024551          239 LVAFLCLPA---ASYITGQV  255 (266)
Q Consensus       239 ~~~~l~s~~---~~~~~G~~  255 (266)
                      ++++++...   ..|++|+.
T Consensus       239 ~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         239 VFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             HHHHHHHCSSCCSEEESCST
T ss_pred             HHHHHHhCCCCCeEEecHHH
Confidence            999999643   46788764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=2.2e-46  Score=315.53  Aligned_cols=245  Identities=21%  Similarity=0.260  Sum_probs=203.7

Q ss_pred             cCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+++ +++.++++.+.+..+.++.+|++++++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            47999999999765  9999999999999999999999854 55566777777778889999999999999999999999


Q ss_pred             cCCcccEEEeccccccc----cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhh
Q 024551           93 FDGKLNILVNNAALVVM----KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAY  168 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y  168 (266)
                      + +++|++|+|+|....    ....+..++.+...+.+++.+.+...+.+.+.++  ..+.|+++++.+...+.+....|
T Consensus        81 ~-g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~~~~~~~~~~~~y  157 (274)
T d2pd4a1          81 L-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN--NGASVLTLSYLGSTKYMAHYNVM  157 (274)
T ss_dssp             T-SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTSBCTTCHHH
T ss_pred             c-CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc--cCcceeeecccccccccccchhh
Confidence            8 899999999997643    2333455566666666666666666665554332  23467777777778888888999


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCC
Q 024551          169 AASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAA  248 (266)
Q Consensus       169 ~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~  248 (266)
                      +++|+|+++|+|+++.|++++|||||+|+||+++|++.....+.+.  .........|++|+.+|||||++++||+|+.+
T Consensus       158 ~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~--~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s  235 (274)
T d2pd4a1         158 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRM--ILKWNEINAPLRKNVSLEEVGNAGMYLLSSLS  235 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHH--HHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHH--HHHHHhhhhhccCCcCHHHHHHHHHHHhChhh
Confidence            9999999999999999999999999999999999998766544332  23555667899999999999999999999999


Q ss_pred             CCccccEEEeCCCccCC
Q 024551          249 SYITGQVISIDGGYTAG  265 (266)
Q Consensus       249 ~~~~G~~l~vdgG~~~~  265 (266)
                      +|+|||+|.||||+++.
T Consensus       236 ~~itG~~i~vDGG~~~~  252 (274)
T d2pd4a1         236 SGVSGEVHFVDAGYHVM  252 (274)
T ss_dssp             TTCCSCEEEESTTGGGB
T ss_pred             CCCcCceEEECCChhhc
Confidence            99999999999999864

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.6e-46  Score=318.41  Aligned_cols=249  Identities=23%  Similarity=0.214  Sum_probs=202.6

Q ss_pred             cccCCCCEEEEecCCC--chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc---------CC---eeEEEecc---
Q 024551           13 KWSLRGMTALVTGGTR--GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK---------GF---KVTGSVCD---   75 (266)
Q Consensus        13 ~~~~~~k~vlItGas~--giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~---------~~---~~~~~~~D---   75 (266)
                      +++|+||++|||||++  |||+++|++|+++|++|++++|++.............         +.   .-....+|   
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            4789999999999875  9999999999999999999999776544333322211         00   01122232   


Q ss_pred             -----------------CCCHHHHHHHHHHHHhhcCCcccEEEecccccc--ccCCCCCCHHHHHHHhccchhhHHHHHH
Q 024551           76 -----------------LSFGDQREKLIETVSSVFDGKLNILVNNAALVV--MKRATEYTLEEYSSVMSTNVESSYHLCQ  136 (266)
Q Consensus        76 -----------------~~~~~~i~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~  136 (266)
                                       .++..+++++++++.+.| +++|+||||||...  .+++.+.+.++|++.+++|+.+++++++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~-G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHh-CCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                             345667789999999999 89999999999753  4678899999999999999999999999


Q ss_pred             HHHHHHHhcCCCeEEEEecCCCCC-CCCCchhhhhhHHHHHHHHHHHHHHhc-cCCcEEEEEecCcccCCCCCCCccchh
Q 024551          137 LAHPLLKASGNASIVFMSSVAGAI-SIPRLSAYAASKGAINQLTKNLACEWA-TDSIRVNAVSPWAVNTQISPPDLNDLL  214 (266)
Q Consensus       137 ~~~~~m~~~~~g~iv~vss~~~~~-~~~~~~~y~~sK~al~~~~~~~a~el~-~~gi~v~~i~PG~v~t~~~~~~~~~~~  214 (266)
                      +++|.|.++  |.++++++.+... ..+....|+++|+++.++++.++.|++ ++|||||+|+||+++|++.......  
T Consensus       162 ~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~--  237 (297)
T d1d7oa_         162 HFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI--  237 (297)
T ss_dssp             HHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH--
T ss_pred             HHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCC--
Confidence            999988765  4666666655443 456778999999999999999999997 5799999999999999998764332  


Q ss_pred             HHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCccCCC
Q 024551          215 VQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYTAGN  266 (266)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~~~  266 (266)
                      ...........|++|+++|||||++++||+|+.++|+|||+|.||||++..+
T Consensus       238 ~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G  289 (297)
T d1d7oa_         238 DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG  289 (297)
T ss_dssp             HHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcC
Confidence            2233556677899999999999999999999999999999999999998653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.7e-46  Score=308.98  Aligned_cols=228  Identities=25%  Similarity=0.295  Sum_probs=197.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|++|||||++|||+++|++|+++|++|++++|+++            +.+...+++|+++......+.....+..  ..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~   66 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEA--PL   66 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHS--CE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhccc--cc
Confidence            699999999999999999999999999999999865            3467788999999999999999888775  45


Q ss_pred             cEEEecccccc----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHH------HhcCCCeEEEEecCCCCCCCCCchh
Q 024551           98 NILVNNAALVV----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLL------KASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        98 d~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m------~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      +.++.+++...    .......+.+.|++.+++|+.+++.+++.+.+.+      .+++.|+||++||..+..+.++...
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~  146 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  146 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchh
Confidence            66666666432    3445567889999999999999999999999984      4556799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC-CCCCCccchHHHHHHHhcC
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL-ARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~eia~~~~~l~s~  246 (266)
                      |+++|+|+++|+|+++.||+++|||||+|+||+++|++........    ........|+ +|+++|||+|++++||++ 
T Consensus       147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~R~g~pedvA~~v~fL~s-  221 (241)
T d1uaya_         147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKA----KASLAAQVPFPPRLGRPEEYAALVLHILE-  221 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHH----HHHHHTTCCSSCSCCCHHHHHHHHHHHHH-
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhH----HHHHHhcCCCCCCCcCHHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999876644322    2344555665 899999999999999997 


Q ss_pred             CCCCccccEEEeCCCccCC
Q 024551          247 AASYITGQVISIDGGYTAG  265 (266)
Q Consensus       247 ~~~~~~G~~l~vdgG~~~~  265 (266)
                       ++|+|||+|.||||++++
T Consensus       222 -~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         222 -NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             -CTTCCSCEEEESTTCCCC
T ss_pred             -CCCCCCCEEEECCcccCC
Confidence             479999999999999986

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=8.2e-45  Score=304.27  Aligned_cols=241  Identities=27%  Similarity=0.336  Sum_probs=201.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh-HHHHHHHHHHhc-CCeeEEEeccCCC----HHHHHHHHHHHHhh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-MINERIQEWESK-GFKVTGSVCDLSF----GDQREKLIETVSSV   92 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~-~~~~~~~~l~~~-~~~~~~~~~D~~~----~~~i~~~~~~~~~~   92 (266)
                      .++|||||++|||+++|++|+++|++|++++|+.+ ..+++++++... +.+....++|+.+    ++.++++++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999854 457778887765 4577777765544    56788888889999


Q ss_pred             cCCcccEEEeccccccccCCC-----------CCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-----CCCeEEEEecC
Q 024551           93 FDGKLNILVNNAALVVMKRAT-----------EYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-----GNASIVFMSSV  156 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----~~g~iv~vss~  156 (266)
                      + |++|++|||||+..+.++.           +...+.+...+..|+.+++...+...+.+...     ..+.++++++.
T Consensus        82 ~-g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          82 F-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             H-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             h-CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            9 7999999999987654432           23355678889999999999999888877542     35788899999


Q ss_pred             CCCCCCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCC-CCCccc
Q 024551          157 AGAISIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLAR-SAEPNE  235 (266)
Q Consensus       157 ~~~~~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e  235 (266)
                      .+..+.|++..|++||+|+++|+|+++.|++++|||||+|+||+++|++..+   .   .....+....|++| .++|||
T Consensus       161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---~---~~~~~~~~~~pl~r~~~~pee  234 (266)
T d1mxha_         161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---Q---ETQEEYRRKVPLGQSEASAAQ  234 (266)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---H---HHHHHHHTTCTTTSCCBCHHH
T ss_pred             cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---H---HHHHHHHhcCCCCCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999986543   1   22245667789865 589999


Q ss_pred             hHHHHHHHhcCCCCCccccEEEeCCCccCCC
Q 024551          236 ISPLVAFLCLPAASYITGQVISIDGGYTAGN  266 (266)
Q Consensus       236 ia~~~~~l~s~~~~~~~G~~l~vdgG~~~~~  266 (266)
                      +|++++||+|++++|+|||+|.||||++++.
T Consensus       235 va~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         235 IADAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence            9999999999999999999999999999873

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-45  Score=308.18  Aligned_cols=219  Identities=27%  Similarity=0.342  Sum_probs=194.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +++|||||++|||+++|++|+++ |++|++++|+++++++.++++++.+.++.+++||++|.++++++++++.+++ ++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g~i   82 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-GGL   82 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SSE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-CCc
Confidence            45699999999999999999986 8999999999999999999999988899999999999999999999999999 799


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC----------------
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS----------------  161 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~----------------  161 (266)
                      |+||||||+.......+.+.++|++.+++|+.+++++++.++|+|++  .|+||+++|..+..+                
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~  160 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSET  160 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhcccc
Confidence            99999999988888888899999999999999999999999999975  379999999765321                


Q ss_pred             -------------------------CCCchhhhhhHHHHHHHHHHHHHHhcc----CCcEEEEEecCcccCCCCCCCccc
Q 024551          162 -------------------------IPRLSAYAASKGAINQLTKNLACEWAT----DSIRVNAVSPWAVNTQISPPDLND  212 (266)
Q Consensus       162 -------------------------~~~~~~y~~sK~al~~~~~~~a~el~~----~gi~v~~i~PG~v~t~~~~~~~~~  212 (266)
                                               ..+...|++||+++.+|++.++.+|++    .||+||+|+||+++|+|..+..  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~--  238 (275)
T d1wmaa1         161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA--  238 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC--
T ss_pred             cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc--
Confidence                                     223457999999999999999999876    4899999999999999976542  


Q ss_pred             hhHHHHHHHHhcCCCCCCCCccchHHHHHHHh--cCCCCCccccEEEeCC
Q 024551          213 LLVQEYVKLIAKTPLARSAEPNEISPLVAFLC--LPAASYITGQVISIDG  260 (266)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~--s~~~~~~~G~~l~vdg  260 (266)
                                       ..+|||+|++++|++  +++..+.+|+++. |.
T Consensus       239 -----------------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         239 -----------------TKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             -----------------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             -----------------cCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence                             247999999999987  4667788999886 54

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=6.6e-44  Score=299.22  Aligned_cols=246  Identities=17%  Similarity=0.173  Sum_probs=202.7

Q ss_pred             cCCCCEEEEecC--CCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGG--TRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGa--s~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .|+||++|||||  ++|||+++|++|+++|++|++++|+.+++.+...  ++.+.+...++||++++++++++++.+.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~--~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT--DRLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH--TTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH--HHcCCceeeEeeecccccccccccchhhhc
Confidence            589999999994  5799999999999999999999999876533222  234667888999999999999999999887


Q ss_pred             c--CCcccEEEecccccc-----ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc
Q 024551           93 F--DGKLNILVNNAALVV-----MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL  165 (266)
Q Consensus        93 ~--~~~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~  165 (266)
                      +  .+++|+++||+|...     ..++.+.+.++|.+.+++|+.+.+...+...+.+..   +.+++++|.....+.|.+
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~p~~  157 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAMPAY  157 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCCTTT
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccCccc
Confidence            5  267999999999753     235667889999999999999999998888765433   456667777778889999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc----ch---h-HHHHHHHHhcCCCCC-CCCccch
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN----DL---L-VQEYVKLIAKTPLAR-SAEPNEI  236 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~----~~---~-~~~~~~~~~~~~~~~-~~~~~ei  236 (266)
                      ..|+++|+|+.+|+|+++.|++++|||||+|+||+++|++......    ..   . ....+......|++| +.+|+|+
T Consensus       158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dv  237 (268)
T d2h7ma1         158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPV  237 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHH
T ss_pred             chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHH
Confidence            9999999999999999999999999999999999999986532211    11   1 111234455678765 8999999


Q ss_pred             HHHHHHHhcCCCCCccccEEEeCCCccCC
Q 024551          237 SPLVAFLCLPAASYITGQVISIDGGYTAG  265 (266)
Q Consensus       237 a~~~~~l~s~~~~~~~G~~l~vdgG~~~~  265 (266)
                      |++++||+||.++|+|||.|.||||++.+
T Consensus       238 a~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         238 AKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHhCchhcCccCCEEEECcCcccc
Confidence            99999999999999999999999999864

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=5.9e-44  Score=296.41  Aligned_cols=223  Identities=26%  Similarity=0.303  Sum_probs=186.0

Q ss_pred             CEEEEecCCCchHHHHHHHHH---HCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh--hc
Q 024551           19 MTALVTGGTRGIGYAIVEELA---RFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS--VF   93 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la---~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~--~~   93 (266)
                      |++|||||++|||+++|++|+   ++|++|++++|++++++++.+. .+.+.++.+++||++|+++++++++++.+  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL-AKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHH-HHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            799999999999999999996   5799999999999998887654 44467899999999999999999999865  45


Q ss_pred             CCcccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-----------CCCeEEEEecCCCCC-
Q 024551           94 DGKLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-----------GNASIVFMSSVAGAI-  160 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----------~~g~iv~vss~~~~~-  160 (266)
                       +++|+||||||+... ..+.+.+.++|++.+++|+.+++++++.++|+|+++           +.|++|+++|..+.. 
T Consensus        82 -~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          82 -QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             -GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             -CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence             789999999998654 467788999999999999999999999999999864           368999999988764 


Q ss_pred             --CCCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHH
Q 024551          161 --SIPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISP  238 (266)
Q Consensus       161 --~~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~  238 (266)
                        +.+++..|++||+|+.+|+++++.|++++||+||+|+||+++|+|.....+....+               .+++++.
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~~~~~---------------~~~~i~~  225 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPT---------------STGQIVQ  225 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSBCHHH---------------HHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCCCCchH---------------HHHHHHH
Confidence              45567899999999999999999999999999999999999999987643321111               1233334


Q ss_pred             HHHHHhcCCCCCccccEEEeCCCc
Q 024551          239 LVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       239 ~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      .+.++    ....||+++.+||+.
T Consensus       226 ~i~~l----~~~~tG~~i~~dG~~  245 (248)
T d1snya_         226 TISKL----GEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHC----CGGGTTCEECTTSCB
T ss_pred             HHHhc----CccCCCcEEEECCeE
Confidence            44333    344689999999864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-43  Score=293.21  Aligned_cols=215  Identities=22%  Similarity=0.273  Sum_probs=190.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++||++||||||+|||+++|++|+++|++|++++|++++++++.+++... +..+..+.+|+++.+++...++.+.+.+ 
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-
Confidence            89999999999999999999999999999999999999999999887654 6789999999999999999999999998 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      +.+|+++||||......+.+.+.++|++++++|+.+++++++.++|+|+++ .|+||++||.++..+.|+...|++||+|
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaa  169 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFA  169 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHH
Confidence            789999999999888889999999999999999999999999999999765 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcc--CCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          175 INQLTKNLACEWAT--DSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       175 l~~~~~~~a~el~~--~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      +++|+++++.|++.  .||+||+|+||+++|++........            +.....+||++|+.++...
T Consensus       170 l~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~------------~~~~~~~~e~~a~~i~~~~  229 (269)
T d1xu9a_         170 LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI------------VHMQAAPKEECALEIIKGG  229 (269)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG------------GGGGCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC------------ccccCCCHHHHHHHHHHHh
Confidence            99999999999974  4799999999999998754322211            1112345677776666544

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.8e-44  Score=294.29  Aligned_cols=218  Identities=16%  Similarity=0.156  Sum_probs=189.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC-C
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD-G   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-~   95 (266)
                      +||++|||||++|||+++|++|+++|++|+++++++..          .......+.+|.++.++++.+...+.+.+. +
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999887642          124566778899999999998888887652 4


Q ss_pred             cccEEEeccccccc-cCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           96 KLNILVNNAALVVM-KRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        96 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                      ++|+||||||.... ....+.+.++|++.+++|+.+++++++.++|+|++  .|+||++||.++..+.+++..|++||+|
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaa  148 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGA  148 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHH
Confidence            79999999997654 44566678999999999999999999999999965  4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhc--cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          175 INQLTKNLACEWA--TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       175 l~~~~~~~a~el~--~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      +++|+|+++.|++  ++|||||+|+||+++|++.+..++            ..+..++.+||++|+.++||+++...++|
T Consensus       149 l~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~------------~~~~~~~~~pe~va~~~~~l~s~~~~~i~  216 (236)
T d1dhra_         149 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP------------EADFSSWTPLEFLVETFHDWITGNKRPNS  216 (236)
T ss_dssp             HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST------------TSCGGGSEEHHHHHHHHHHHHTTTTCCCT
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc------------cchhhcCCCHHHHHHHHHHHhCCCccCCC
Confidence            9999999999998  579999999999999987443222            22345778899999999999999999999


Q ss_pred             ccEEEe
Q 024551          253 GQVISI  258 (266)
Q Consensus       253 G~~l~v  258 (266)
                      |+.|.|
T Consensus       217 G~~i~v  222 (236)
T d1dhra_         217 GSLIQV  222 (236)
T ss_dssp             TCEEEE
T ss_pred             CCeEEE
Confidence            997776

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.9e-42  Score=287.57  Aligned_cols=222  Identities=23%  Similarity=0.264  Sum_probs=181.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +.|+||||||++|||+++|++|+++|+  +|++++|++++++++.+.   .+.+++++++|++|+++++++++++.+.++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh---hCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            469999999999999999999999996  688999999888765432   356899999999999999999999999872


Q ss_pred             -CcccEEEecccccc-ccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-----------CCeEEEEecCCCCCC
Q 024551           95 -GKLNILVNNAALVV-MKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-----------NASIVFMSSVAGAIS  161 (266)
Q Consensus        95 -~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-----------~g~iv~vss~~~~~~  161 (266)
                       .++|+||||||+.. ..++.+.+.++|++.+++|+.|++++++.++|+|++++           .++++++++......
T Consensus        79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence             24999999999864 46788899999999999999999999999999998642           378999888765543


Q ss_pred             -------CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCcc
Q 024551          162 -------IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPN  234 (266)
Q Consensus       162 -------~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (266)
                             ..+..+|++||+|+.+|+++++.||+++||+||+|+||+++|+|.....                   ..+||
T Consensus       159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~-------------------~~~~e  219 (250)
T d1yo6a1         159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA-------------------ALTVE  219 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------H
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC-------------------CCCHH
Confidence                   2345679999999999999999999999999999999999999865321                   24689


Q ss_pred             chHHHHHHHhcCCCCCccccEEEeCC
Q 024551          235 EISPLVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       235 eia~~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                      |.++.++..+.+.....+|+++..||
T Consensus       220 ~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         220 QSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            99999998887767778999988775

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=8.9e-42  Score=284.39  Aligned_cols=221  Identities=30%  Similarity=0.379  Sum_probs=170.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |++|||||++|||+++|++|+++|++|++++|+++.                 ..+|+.+.+..+....++.....+.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            899999999999999999999999999999997542                 257999999998887777766546899


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC------------------
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI------------------  160 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~------------------  160 (266)
                      ++|+|||+...       .+.|.....+|+.+...+.+...+.+.+...+.+.++.+.....                  
T Consensus        65 ~lv~~Ag~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  137 (257)
T d1fjha_          65 GLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEEEcCCCCCc-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence            99999997542       23377788999999999999999998877666666665543221                  


Q ss_pred             ---------C-CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCC
Q 024551          161 ---------S-IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARS  230 (266)
Q Consensus       161 ---------~-~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (266)
                               + .++...|++||+|+++|+|+++.||+++|||||+|+||+++|++...........+ .......|++|+
T Consensus       138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~-~~~~~~~PlgR~  216 (257)
T d1fjha_         138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGE-SIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSC
T ss_pred             EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHH-HHHhcCCCCCCC
Confidence                     1 12245799999999999999999999999999999999999999876544332221 122334699999


Q ss_pred             CCccchHHHHHHHhcCCCCCccccEEEeCCCccC
Q 024551          231 AEPNEISPLVAFLCLPAASYITGQVISIDGGYTA  264 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~~  264 (266)
                      ++|||+|++++||+|++++|+|||+|.||||++.
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence            9999999999999999999999999999999973

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.6e-41  Score=276.76  Aligned_cols=221  Identities=18%  Similarity=0.183  Sum_probs=184.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-CCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-DGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~   96 (266)
                      .++||||||++|||+++|++|+++|++|++++|+++..          ......+.+|+.+.++.....+.+.+.+ .++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            34579999999999999999999999999999987531          2345566789988888887777777743 378


Q ss_pred             ccEEEecccccccc-CCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           97 LNILVNNAALVVMK-RATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        97 id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      ||+||||||+...+ ...+.+.++|+.++++|+.++++++++++|+|++  +|+||++||..+..+.+++..|++||+|+
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal  149 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAV  149 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHH
Confidence            99999999986554 4445556889999999999999999999999965  48999999999999999999999999999


Q ss_pred             HHHHHHHHHHhc--cCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHH-HHhcCCCCCcc
Q 024551          176 NQLTKNLACEWA--TDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVA-FLCLPAASYIT  252 (266)
Q Consensus       176 ~~~~~~~a~el~--~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~-~l~s~~~~~~~  252 (266)
                      ++|+++++.|++  +.+|+||+|+||+++|++.+...+            ..+..++.+|+++++.++ |+.++...++|
T Consensus       150 ~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~------------~~~~~~~~~~~~va~~~~~~l~~~~~~~~t  217 (235)
T d1ooea_         150 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP------------NADHSSWTPLSFISEHLLKWTTETSSRPSS  217 (235)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST------------TCCGGGCBCHHHHHHHHHHHHHCGGGCCCT
T ss_pred             HHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc------------CCccccCCCHHHHHHHHHHHhcCccccCCC
Confidence            999999999998  578999999999999987543322            233456788999999987 55566778899


Q ss_pred             ccEEEe---CCCc
Q 024551          253 GQVISI---DGGY  262 (266)
Q Consensus       253 G~~l~v---dgG~  262 (266)
                      |+.+.|   ||+.
T Consensus       218 G~~i~v~~~~g~~  230 (235)
T d1ooea_         218 GALLKITTENGTS  230 (235)
T ss_dssp             TCEEEEEEETTEE
T ss_pred             ceEEEEEeeCCEE
Confidence            999999   5554

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=1.3e-33  Score=235.21  Aligned_cols=224  Identities=22%  Similarity=0.219  Sum_probs=178.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh---hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ---NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++++|||||++|||+++|++|+++|++ |++++|+.   +..+++.+++.+.+.++.++.||++|+++++++++++.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            3569999999999999999999999994 88899864   4567788888888889999999999999999999988765


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASK  172 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK  172 (266)
                        +++|.+|||+|.....++.+.+.++|++.+++|+.+++++.+.+    ...+.++||++||..+..+.++...|+++|
T Consensus        88 --~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~YaAak  161 (259)
T d2fr1a1          88 --VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGN  161 (259)
T ss_dssp             --SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             --ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHHHHH
Confidence              47999999999999999999999999999999999999987654    556678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ++++.|++.++    ..|+++++|+||++.++.+.....       .......-+ ...+|+++++.+..++...  ...
T Consensus       162 a~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~~-------~~~~~~~G~-~~~~~~~~~~~l~~~l~~~--~~~  227 (259)
T d2fr1a1         162 AYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPV-------ADRFRRHGV-IEMPPETACRALQNALDRA--EVC  227 (259)
T ss_dssp             HHHHHHHHHHH----HTTCCCEEEEECCBC-------------------CTTTTE-ECBCHHHHHHHHHHHHHTT--CSS
T ss_pred             HhHHHHHHHHH----hCCCCEEECCCCcccCCccccchH-------HHHHHhcCC-CCCCHHHHHHHHHHHHhCC--Cce
Confidence            99998877654    469999999999887654322110       010111111 2457999999998888543  234


Q ss_pred             ccEEEeCC
Q 024551          253 GQVISIDG  260 (266)
Q Consensus       253 G~~l~vdg  260 (266)
                      ..++.+|.
T Consensus       228 ~~v~~~d~  235 (259)
T d2fr1a1         228 PIVIDVRW  235 (259)
T ss_dssp             CEECEECH
T ss_pred             EEEEeCcH
Confidence            45555553

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=3.2e-20  Score=160.35  Aligned_cols=227  Identities=15%  Similarity=0.059  Sum_probs=155.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-----hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-----NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |+||||||||.||++++++|.++|++|++++|..     .+++.+..+......++.++++|++|.+++++++...    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            8999999999999999999999999999999854     3334444443344568999999999999999998864    


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------CC
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------SI  162 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~~  162 (266)
                        .+|+++|+|+......    +.++.+..+++|+.++.++++++...- .++..++|++||...+.           +.
T Consensus        78 --~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~  150 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (357)
T ss_dssp             --CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCC
Confidence              5899999999865432    223355678999999999988874321 12245899999876431           12


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHH-HHHHHhc-C---------CCCCCC
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQE-YVKLIAK-T---------PLARSA  231 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~-~---------~~~~~~  231 (266)
                      .+...|+.||.+.+.+++.++..+   ++.+..+.|+.+..|............. ....... .         ..+.+.
T Consensus       151 ~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~  227 (357)
T d1db3a_         151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (357)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecce
Confidence            235689999999999999988763   6899999999888876544332222221 1222111 1         112367


Q ss_pred             CccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          232 EPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       232 ~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ..+|++++++.++...    .|+.+++..|..
T Consensus       228 ~v~D~~~a~~~~~~~~----~~~~yni~sg~~  255 (357)
T d1db3a_         228 HAKDYVKMQWMMLQQE----QPEDFVIATGVQ  255 (357)
T ss_dssp             EHHHHHHHHHHTTSSS----SCCCEEECCCCC
T ss_pred             eechHHHHHHHHHhCC----CCCeEEECCCCc
Confidence            7899999998877432    466677766543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.83  E-value=3.6e-22  Score=157.93  Aligned_cols=157  Identities=15%  Similarity=0.117  Sum_probs=116.9

Q ss_pred             CccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           11 DKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        11 ~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      ....+++||+++||||++|||++++++|+++|++|++++|+.++++++.+++.+. .++.+..+|++|.+++++++    
T Consensus        16 ~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~----   90 (191)
T d1luaa1          16 AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV----   90 (191)
T ss_dssp             HTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT----
T ss_pred             HcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh----
Confidence            3456899999999999999999999999999999999999999999999988764 34556789999999887654    


Q ss_pred             hhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-CCchhhh
Q 024551           91 SVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-PRLSAYA  169 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-~~~~~y~  169 (266)
                          +++|+||||||..    +...+.++|++.+++|+.+.++....+.+.+.... .....+++.....+. .+...|+
T Consensus        91 ----~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~  161 (191)
T d1luaa1          91 ----KGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLK  161 (191)
T ss_dssp             ----TTCSEEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHH
T ss_pred             ----cCcCeeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHH
Confidence                4699999999964    34568999999999999888877544433222211 122222222111111 1235699


Q ss_pred             hhHHHHHHHHHH
Q 024551          170 ASKGAINQLTKN  181 (266)
Q Consensus       170 ~sK~al~~~~~~  181 (266)
                      .+|+++..|+++
T Consensus       162 ~sk~a~~~l~~s  173 (191)
T d1luaa1         162 LHRACIAKLFES  173 (191)
T ss_dssp             HHHHHHHHHTSC
T ss_pred             HHHHHHHHHHhc
Confidence            999999887653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.76  E-value=2.4e-17  Score=141.17  Aligned_cols=223  Identities=21%  Similarity=0.203  Sum_probs=153.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +||+||||||+|-||.+++++|.++|++|+.+.|+.+....+.......  ......+..|++|.+++.+++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            4999999999999999999999999999999999988776665543322  3445567789999987666543       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-CC----------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-IP----------  163 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-~~----------  163 (266)
                       .+|+++|+++.....    .+   ....+..|+.++.++++.+..   ..+..++|++||..+... .+          
T Consensus        83 -~~~~v~~~a~~~~~~----~~---~~~~~~~nv~gt~~ll~~~~~---~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~  151 (342)
T d1y1pa1          83 -GAAGVAHIASVVSFS----NK---YDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYLDEK  151 (342)
T ss_dssp             -TCSEEEECCCCCSCC----SC---HHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEECTT
T ss_pred             -cchhhhhhccccccc----cc---ccccccchhhhHHHHHHhhhc---ccccccccccccceeeccCCCCCCCcccccc
Confidence             489999999865321    12   335577899999999887732   223579999999754321 10          


Q ss_pred             --------------------CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHH-HHHHHH
Q 024551          164 --------------------RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQ-EYVKLI  222 (266)
Q Consensus       164 --------------------~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~~~  222 (266)
                                          +...|+.+|.+.+.+++.+.+... .++++..++|+.+-.+...+........ ....+.
T Consensus       152 ~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~  230 (342)
T d1y1pa1         152 SWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLF  230 (342)
T ss_dssp             CCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHH
T ss_pred             ccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHHHHHH
Confidence                                124699999999999999988765 4688899999988776543332222211 111111


Q ss_pred             --------hcCCCCCCCCccchHHHHHHHhcCCCCCccccEEEeCC
Q 024551          223 --------AKTPLARSAEPNEISPLVAFLCLPAASYITGQVISIDG  260 (266)
Q Consensus       223 --------~~~~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdg  260 (266)
                              ...+.+.+..++|+|++++..+..  ....|+.....+
T Consensus       231 ~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~--~~~~g~~~~~~~  274 (342)
T d1y1pa1         231 NGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTA  274 (342)
T ss_dssp             TTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECC
T ss_pred             cCCcCcccCCccceeeeeHHHHHHHHHHhhcC--ccccceEEEEcC
Confidence                    112233467789999998766632  224566555444

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=4.7e-17  Score=139.03  Aligned_cols=226  Identities=15%  Similarity=0.120  Sum_probs=153.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH---HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM---INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+|||||+|-||++++++|+++|++|++++|....   .....+.+  ...++.++++|++|.+.+.++++.      .+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~------~~   73 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALMTEILHD------HA   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH--HTSCCEEEECCTTCHHHHHHHHHH------TT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh--cCCCCEEEEeecCCHHHHHHHHhc------cC
Confidence            59999999999999999999999999998762211   11122222  235788999999999999888874      35


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC------------CC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI------------PR  164 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~------------~~  164 (266)
                      +|++||+|+.....    .+.++.++.+++|+.++.++++++.    +.+-.++|++||...+.+.            .+
T Consensus        74 ~d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~----~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p  145 (338)
T d1udca_          74 IDTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMR----AANVKNFIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_dssp             CSEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred             CCEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHHH----HhCCCEEEecCcceEEccccccccccccccCCC
Confidence            89999999964321    1233456789999999999988874    4445689999997755322            23


Q ss_pred             chhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-------chhHHHHHHHH-h-cCC---------
Q 024551          165 LSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-------DLLVQEYVKLI-A-KTP---------  226 (266)
Q Consensus       165 ~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~-~-~~~---------  226 (266)
                      ...|+.+|.+.+.+++....+.  .++.+..+.|+.+..+.....+.       ........... . ..+         
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~  223 (338)
T d1udca_         146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP  223 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSS
T ss_pred             cchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcc
Confidence            5689999999999999877664  35788888888877754332211       11111111111 1 111         


Q ss_pred             ------CCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          227 ------LARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       227 ------~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                            .+.+...+|++.++..+.........++.+++.++..
T Consensus       224 ~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~  266 (338)
T d1udca_         224 TEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_dssp             STTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSC
T ss_pred             cCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCC
Confidence                  1224567888877666554333445677888877653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.73  E-value=2.7e-16  Score=136.82  Aligned_cols=174  Identities=16%  Similarity=0.099  Sum_probs=126.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC----------------hhHHHHHHHHHHh-cCCeeEEEeccCCCHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----------------QNMINERIQEWES-KGFKVTGSVCDLSFGD   80 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~----------------~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~   80 (266)
                      ||+||||||+|-||.+++++|+++|++|++++.-                .....+....... .+.++.++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            7899999999999999999999999999988521                0111122222222 2467999999999999


Q ss_pred             HHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCC
Q 024551           81 QREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGA  159 (266)
Q Consensus        81 ~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~  159 (266)
                      .++++++..      ++|+|+|.|+..... ....+.+.....+++|+.++.++++.+    ++.+ ..++++.||....
T Consensus        81 ~l~~~~~~~------~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~~i~~ss~~~~  149 (393)
T d1i24a_          81 FLAESFKSF------EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAI----KEFGEECHLVKLGTMGEY  149 (393)
T ss_dssp             HHHHHHHHH------CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEECCGGGG
T ss_pred             HHHHHHHhh------cchheeccccccccc-cccccccccccccccccccccHHHHHH----HHhccccceeeccccccc
Confidence            999998854      589999999875321 222355667788999999999998877    3433 3356666665433


Q ss_pred             CC------------------------CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCC
Q 024551          160 IS------------------------IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQI  205 (266)
Q Consensus       160 ~~------------------------~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~  205 (266)
                      ..                        ..+...|+.+|.+.+.+++.++.+   .++++..+.|+.+..+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         150 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVK  216 (393)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSC
T ss_pred             cccccccccccccccccccccccccccccccHHHHHhhhhcccccccccc---cceeeeecccccccCCC
Confidence            21                        122357999999999999988776   46888999988877654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3e-16  Score=124.74  Aligned_cols=198  Identities=12%  Similarity=0.065  Sum_probs=133.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ..|+++||||||.||++++++|.++|++|.++.|+++++...      ....+.++.+|++|.+++.+++.        .
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~--------~   67 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA--------G   67 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT--------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc--------C
Confidence            458899999999999999999999999999999998864321      23468899999999999877765        3


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc----hhhhhhH
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL----SAYAASK  172 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~----~~y~~sK  172 (266)
                      .|++|+++|........           +++..++.++    ++.+++.+-.++|++||.......+..    ..|...|
T Consensus        68 ~d~vi~~~g~~~~~~~~-----------~~~~~~~~~l----~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~  132 (205)
T d1hdoa_          68 QDAVIVLLGTRNDLSPT-----------TVMSEGARNI----VAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDH  132 (205)
T ss_dssp             CSEEEECCCCTTCCSCC-----------CHHHHHHHHH----HHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHH
T ss_pred             CCEEEEEeccCCchhhh-----------hhhHHHHHHH----HHHHHhcCCCeEEEEeeeeccCCCccccccccccchHH
Confidence            79999999965332211           2333333344    455577777899999987755433322    2445555


Q ss_pred             HHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcCCCCCcc
Q 024551          173 GAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLPAASYIT  252 (266)
Q Consensus       173 ~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~~~~~~~  252 (266)
                      ...+.+       +...|++...|.||.+............        ........+.+.+|+|+.++..+.+. . ..
T Consensus       133 ~~~e~~-------l~~~~~~~tiirp~~~~~~~~~~~~~~~--------~~~~~~~~~i~~~DvA~~~~~~l~~~-~-~~  195 (205)
T d1hdoa_         133 IRMHKV-------LRESGLKYVAVMPPHIGDQPLTGAYTVT--------LDGRGPSRVISKHDLGHFMLRCLTTD-E-YD  195 (205)
T ss_dssp             HHHHHH-------HHHTCSEEEEECCSEEECCCCCSCCEEE--------SSSCSSCSEEEHHHHHHHHHHTTSCS-T-TT
T ss_pred             HHHHHH-------HHhcCCceEEEecceecCCCCcccEEEe--------eCCCCCCCcCCHHHHHHHHHHHhCCC-C-CC
Confidence            544433       3456899999999988643222211110        01112234567899999999988543 3 45


Q ss_pred             ccEEEeCC
Q 024551          253 GQVISIDG  260 (266)
Q Consensus       253 G~~l~vdg  260 (266)
                      |+.+.+-+
T Consensus       196 g~~~~~s~  203 (205)
T d1hdoa_         196 GHSTYPSH  203 (205)
T ss_dssp             TCEEEEEC
T ss_pred             CEEEecCC
Confidence            88776543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=2.2e-16  Score=134.44  Aligned_cols=216  Identities=16%  Similarity=0.029  Sum_probs=148.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh-----HHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-----MINERIQEWES-KGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~-----~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |++|||||||-||++++++|.++|++|+.++|..+     +++.+...... ....+.++.+|+++.+++...++..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~---   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence            89999999999999999999999999999998532     22222221111 1356889999999999999888753   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEecCCCCC----------C
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSSVAGAI----------S  161 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss~~~~~----------~  161 (266)
                         ++|++||+|+......    ..+.-...++.|+.+...+..++....... ...++++.||.....          +
T Consensus        79 ---~~D~Vih~Aa~~~~~~----~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~  151 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHVAV----SFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  151 (339)
T ss_dssp             ---CCSEEEECCSCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             ---ccchhhhccccccccc----cccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence               5899999999754321    234456778999999999988887654443 234566665554322          1


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHH-HHH-HhcCC---------CCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEY-VKL-IAKTP---------LARS  230 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~-~~~-~~~~~---------~~~~  230 (266)
                      ..+...|+.+|.+.+.+++.+...   .|+.+..+.|+.+..|.............. ... ....+         .+.+
T Consensus       152 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~  228 (339)
T d1n7ha_         152 FHPRSPYAASKCAAHWYTVNYREA---YGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  228 (339)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence            224568999999999999988776   468999999998888765443322222211 111 11111         1235


Q ss_pred             CCccchHHHHHHHhcCC
Q 024551          231 AEPNEISPLVAFLCLPA  247 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~~  247 (266)
                      ...+|+++++..++...
T Consensus       229 ~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         229 GFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             EEHHHHHHHHHHHHTSS
T ss_pred             eeeehHHHHHHHHHhcC
Confidence            67899999999888543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.69  E-value=9.5e-17  Score=138.48  Aligned_cols=223  Identities=16%  Similarity=0.173  Sum_probs=154.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEE-ecCChhH--HHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNM--INERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~-~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +||||||+|.||++++++|+++|+.|++ +++....  .+.+ +.+ ....++.++.+|++|..+++.+++..      .
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~------~   73 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDI-SESNRYNFEHADICDSAEITRIFEQY------Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTT-TTCTTEEEEECCTTCHHHHHHHHHHH------C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHH-Hhh-hhcCCcEEEEccCCCHHHHHHHHHhC------C
Confidence            6899999999999999999999998654 4432111  1111 111 11357899999999999999888753      5


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-----CCCeEEEEecCCCCCC----------
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-----GNASIVFMSSVAGAIS----------  161 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----~~g~iv~vss~~~~~~----------  161 (266)
                      +|+|||+|+......    +.++.++.+++|+.++..+.+.+...-...     +..++|++||...+..          
T Consensus        74 ~d~VihlAa~~~~~~----~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (361)
T d1kewa_          74 PDAVMHLAAESHVDR----SITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             CSEEEECCSCCCHHH----HHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CCEEEECccccchhh----HHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence            899999999653211    223346689999999999999987754431     2458999999775421          


Q ss_pred             -----------CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC---
Q 024551          162 -----------IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL---  227 (266)
Q Consensus       162 -----------~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---  227 (266)
                                 ..+...|+.||.+.+.+++.++..+   |+.+..+.|+.+-.|......  .......+.....++   
T Consensus       150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~--~i~~~i~~~~~g~~~~v~  224 (361)
T d1kewa_         150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEK--LIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTS--HHHHHHHHHHHTCCEEEE
T ss_pred             cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCc--HHHHHHHHHHcCCCcEEe
Confidence                       1124569999999999999998764   689999999998887543321  111112222233222   


Q ss_pred             ------CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          228 ------ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       228 ------~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                            +.+...+|+|+++..++...   ..|..+++..|.
T Consensus       225 g~g~~~r~~i~v~D~a~ai~~~~~~~---~~~~~~Ni~s~~  262 (361)
T d1kewa_         225 GKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHN  262 (361)
T ss_dssp             TTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCC
T ss_pred             CCCCeEEeCEEHHHHHHHHHHHHhcC---CCCCeEEECCCC
Confidence                  23567899999999888533   246778887664

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.69  E-value=6.6e-16  Score=130.97  Aligned_cols=224  Identities=15%  Similarity=0.120  Sum_probs=143.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCCh-hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQ-NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +||||||+|.||++++++|.++|++|+++++-. ....+..+.+.. ..++.++.+|++|.+++.++++..      ++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~------~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY------MPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhc------CCc
Confidence            589999999999999999999999999886421 111222233322 357889999999999999888754      589


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC----------------
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI----------------  162 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~----------------  162 (266)
                      ++||+|+......    ..++.+..+++|+.++.++++++    .+.+..+.++.+|..+..+.                
T Consensus        75 ~Vih~aa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          75 SCFHLAGQVAMTT----SIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             eEEeecccccccc----cccChHHHHHHHHHHHHHHHHhh----hccccccccccccccccccccccccccccccccccc
Confidence            9999998754311    23345688999999999998877    44444566666665443221                


Q ss_pred             ------------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc----hhHHHHHHHHh--c
Q 024551          163 ------------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND----LLVQEYVKLIA--K  224 (266)
Q Consensus       163 ------------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~----~~~~~~~~~~~--~  224 (266)
                                  .+...|+.+|...+.+.......+.   +....+.|..+..+........    ...........  .
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG---LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  223 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhccC---cccccccccceeeccccccccccccchhhHHHHHHHhccC
Confidence                        2356899999999999998887754   3333333333322222111111    11111111111  1


Q ss_pred             C---------CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          225 T---------PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       225 ~---------~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      .         ..+.+...+|++++++.++.. .....|+.+.+.+|.
T Consensus       224 ~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~-~~~~~~~~~~i~~~~  269 (338)
T d1orra_         224 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  269 (338)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CceEEeCCCceeEeeecccchhhHHHHHHhc-cccccCccccccccc
Confidence            1         112345578999999887743 234678888776553

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.69  E-value=3.8e-16  Score=131.99  Aligned_cols=222  Identities=12%  Similarity=-0.003  Sum_probs=148.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHH-HHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMI-NERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |+||||||+|.||++++++|.++|++|+.++|..... ....+.+. ...++.++.+|++|.+++.+.+...      ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc------cc
Confidence            7999999999999999999999999999999865321 11122221 1247899999999999988887764      46


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecCCCCC-----------CCCCc
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSVAGAI-----------SIPRL  165 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~~~~~-----------~~~~~  165 (266)
                      ++++++++.......    .+.....++.|+.++.+++.++.    +.+ ..++++.||..-..           +..+.
T Consensus        74 ~~~~~~a~~~~~~~~----~~~~~~~~~~n~~g~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~  145 (321)
T d1rpna_          74 QEVYNLAAQSFVGAS----WNQPVTTGVVDGLGVTHLLEAIR----QFSPETRFYQASTSEMFGLIQAERQDENTPFYPR  145 (321)
T ss_dssp             SEEEECCSCCCHHHH----TTSHHHHHHHHTHHHHHHHHHHH----HHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             ccccccccccccccc----ccchHHHHhhhhhchHHHHHHHH----HhCCCcccccccchhhcCcccCCCCCCCCCcccc
Confidence            788888876543221    12245778999999999988773    333 33566666643221           12245


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-HHHHHHHHh-cCC---------CCCCCCcc
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-VQEYVKLIA-KTP---------LARSAEPN  234 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-~~~~~~~~~-~~~---------~~~~~~~~  234 (266)
                      ..|+.+|.+.+.+++.+..+   +++.+..+.|+.+..|.......... .....+... ..+         .+.+...+
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~  222 (321)
T d1rpna_         146 SPYGVAKLYGHWITVNYRES---FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG  222 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred             ChhHHHHHHHHHHHHHHHhh---cCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeH
Confidence            78999999999999988776   45888888888877765443322211 111112111 111         12357789


Q ss_pred             chHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          235 EISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       235 eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      |+++++..++....    +..+++.+|.
T Consensus       223 D~~~~~~~~~~~~~----~~~~ni~~~~  246 (321)
T d1rpna_         223 DYVEAMWLMLQQDK----ADDYVVATGV  246 (321)
T ss_dssp             HHHHHHHHHHHSSS----CCCEEECCSC
T ss_pred             HHHHHHHHHHhcCC----cCCceecccc
Confidence            99999999885332    3345555553

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=5.9e-16  Score=132.52  Aligned_cols=170  Identities=19%  Similarity=0.131  Sum_probs=123.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh-HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |+||||||+|-||++++++|+++|++|+++++... ..+.....-.....++.++.+|++|.++++.++..      .++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~------~~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE------YKI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH------SCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc------cCC
Confidence            79999999999999999999999999998865221 11111111111245788999999999999998874      258


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC---------------C
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS---------------I  162 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~---------------~  162 (266)
                      |++||+|+......    ..+.-+....+|+.++.++++++.    +.+..++|++||...+..               .
T Consensus        76 d~VihlAa~~~~~~----~~~~~~~~~~~N~~~t~~ll~~~~----~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~  147 (347)
T d1z45a2          76 DSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQ----QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL  147 (347)
T ss_dssp             CEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC
T ss_pred             CEEEEccccccccc----cccCcccccccchhhhHHHHHHHH----hcccceEEeecceeeecCcccCCCCCccccccCC
Confidence            99999999754211    223346678899999999988873    444458999999765431               1


Q ss_pred             CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccC
Q 024551          163 PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNT  203 (266)
Q Consensus       163 ~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t  203 (266)
                      .+...|+.||.+.+.+++.+... ...++.+..+.|+.+..
T Consensus       148 ~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         148 GPTNPYGHTKYAIENILNDLYNS-DKKSWKFAILRYFNPIG  187 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHH-STTSCEEEEEEECEEEC
T ss_pred             CCCChhHhHHHHHHHHHHHHHHh-hccCCcEEEEeecceEe
Confidence            23457999999999999988754 23467777777765554

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.9e-16  Score=133.38  Aligned_cols=214  Identities=14%  Similarity=-0.001  Sum_probs=144.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh-----HHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-----MINERIQEWES-KGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~-----~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |++|||||+|.||++++++|.++|++|+.++|..+     .++.+...... ...++.++.+|++|++.+.+++...   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            45599999999999999999999999999998543     22222222211 1347899999999999999988764   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------C
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------S  161 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~  161 (266)
                         .+++++|.++......    ..+.....+++|+.++.++++++...-.. +..++|++||.+.+.           +
T Consensus        79 ---~~~~v~~~~a~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~  150 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSHVKI----SFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTP  150 (347)
T ss_dssp             ---CCSEEEECCSCCCHHH----HHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred             ---ccceeeeeeeccccch----hhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchheecCCCCCCCCCCCC
Confidence               4788888887653221    23445567899999999998887433211 234899999876432           1


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchh-HHHHH-HHHhcCC---------CCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLL-VQEYV-KLIAKTP---------LARS  230 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~-~~~~~-~~~~~~~---------~~~~  230 (266)
                      ..+...|+.||.+.+.+++.++..   .++.+..+.|+.+..|.......... ..... ......+         .+.+
T Consensus       151 ~~P~~~Yg~sK~~aE~~~~~~~~~---~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~  227 (347)
T d1t2aa_         151 FYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW  227 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeee
Confidence            123567999999999999988766   46788888998887764333221111 11111 1111111         2346


Q ss_pred             CCccchHHHHHHHhcC
Q 024551          231 AEPNEISPLVAFLCLP  246 (266)
Q Consensus       231 ~~~~eia~~~~~l~s~  246 (266)
                      ...+|+++++..++..
T Consensus       228 i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         228 GHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             EEHHHHHHHHHHHHHS
T ss_pred             eEecHHHHHHHHHhhc
Confidence            7789999999988854

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.68  E-value=2.7e-15  Score=127.98  Aligned_cols=228  Identities=14%  Similarity=0.075  Sum_probs=156.3

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC----hhHHHHHHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD----QNMINERIQEWES-KGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~----~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ..+-|++|||||+|.||++++++|.++|++|++++|.    ....+........ ...++.++..|+.|........   
T Consensus        13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~---   89 (341)
T d1sb8a_          13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC---   89 (341)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH---
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc---
Confidence            3456899999999999999999999999999998762    2222222222111 1246889999999988755433   


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-------
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-------  162 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-------  162 (266)
                           ...+.++|.+.......    ..++....+++|+.++.++++++    .+.+..++|++||...+...       
T Consensus        90 -----~~~~~v~~~~a~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E  156 (341)
T d1sb8a_          90 -----AGVDYVLHQAALGSVPR----SINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASSSTYGDHPGLPKVE  156 (341)
T ss_dssp             -----TTCSEEEECCSCCCHHH----HHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             -----ccccccccccccccccc----cccCccchhheeehhHHHHHHHH----HhcCCceEEEcccceeeCCCCCCCccC
Confidence                 24688888877543211    34557778999999999998887    45555699999998765322       


Q ss_pred             ----CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-hhH-HHHHHHHhcCC---------C
Q 024551          163 ----PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-LLV-QEYVKLIAKTP---------L  227 (266)
Q Consensus       163 ----~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~-~~~~~~~~~~~---------~  227 (266)
                          .+...|+.+|.+.+.+++.+++..   ++++..+.|+.+..+...+.... ... ....+.....+         .
T Consensus       157 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~  233 (341)
T d1sb8a_         157 DTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETS  233 (341)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEE
Confidence                234789999999999999988764   68888999988877654332211 111 11222222222         2


Q ss_pred             CCCCCccchHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          228 ARSAEPNEISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       228 ~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      +.+..++|++.++..++.... ...|+.+.+..+.
T Consensus       234 r~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~  267 (341)
T d1sb8a_         234 RDFCYIENTVQANLLAATAGL-DARNQVYNIAVGG  267 (341)
T ss_dssp             ECCEEHHHHHHHHHHHHTCCG-GGCSEEEEESCSC
T ss_pred             EEEEEEeccchhhhhhhhccc-cccceeeeecccc
Confidence            346677999999888775332 3467777776543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.8e-15  Score=128.12  Aligned_cols=229  Identities=15%  Similarity=0.109  Sum_probs=153.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecC------ChhHHHHHHHHHH-hcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGR------DQNMINERIQEWE-SKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r------~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      |+||||||+|-||.+++++|.++|+.|+++++      ......+..+.+. ....++.++++|++|.+.+++++..   
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence            78999999999999999999999999998753      1111111112221 1246889999999999999887764   


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC---------
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI---------  162 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~---------  162 (266)
                         ..+++++|.|+......    ..++..+.+++|+.++.++++++    ++.+-.+++++||.......         
T Consensus        80 ---~~~~~i~h~Aa~~~~~~----~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~~~~~~~~~~~~~~  148 (346)
T d1ek6a_          80 ---YSFMAVIHFAGLKAVGE----SVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEAH  148 (346)
T ss_dssp             ---CCEEEEEECCSCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             ---cccccccccccccCcHh----hHhCHHHHHHhhhcccccccchh----hhcCcccccccccceeeeccccccccccc
Confidence               46899999999754321    22334567899999999988776    55555689999887654321         


Q ss_pred             ---CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCc-------cchhHHH-HHHHHh-cC-----
Q 024551          163 ---PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDL-------NDLLVQE-YVKLIA-KT-----  225 (266)
Q Consensus       163 ---~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~-------~~~~~~~-~~~~~~-~~-----  225 (266)
                         .....|+.+|...+..++.++..  ..+.....+.|+.+..+.....+       ....... ...... ..     
T Consensus       149 ~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~  226 (346)
T d1ek6a_         149 PTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF  226 (346)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred             cccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEc
Confidence               23457999999999998877653  34677888888776654322111       1111111 111111 11     


Q ss_pred             ----------CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          226 ----------PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       226 ----------~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                                ..+.+..++|+|.++.++.........++++++.+|..
T Consensus       227 g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~  274 (346)
T d1ek6a_         227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG  274 (346)
T ss_dssp             CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC
T ss_pred             CCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCc
Confidence                      12346788999999887765444556788888887754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.66  E-value=2.3e-15  Score=129.40  Aligned_cols=222  Identities=16%  Similarity=0.068  Sum_probs=153.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |.-++++||||||+|-||++++++|.++|++|+++++....-      ....-....+..+|+.+.+.+..+++      
T Consensus        11 ~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~------   78 (363)
T d2c5aa1          11 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTEDMFCDEFHLVDLRVMENCLKVTE------   78 (363)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGGGTCSEEEECCTTSHHHHHHHHT------
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhhcccCcEEEeechhHHHHHHHhh------
Confidence            444788999999999999999999999999999987654321      01111345677889998887666543      


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------  162 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------  162 (266)
                        .+|.+||+|+.......   ..+.....+..|+.++..++.++    .+.+..++|++||...+...           
T Consensus        79 --~~d~Vih~a~~~~~~~~---~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~  149 (363)
T d2c5aa1          79 --GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNVSLK  149 (363)
T ss_dssp             --TCSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred             --cCCeEeecccccccccc---cccccccccccccchhhHHHHhH----HhhCccccccccccccccccccccccccccc
Confidence              48999999987643221   12335567889999999998877    55556799999998765421           


Q ss_pred             -------CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--hhHHHH-HHHHhcC-------
Q 024551          163 -------PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--LLVQEY-VKLIAKT-------  225 (266)
Q Consensus       163 -------~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~-~~~~~~~-------  225 (266)
                             .+...|+.+|.+.+.+++.+..++   |+.+..+.|+.+..+........  ...... .......       
T Consensus       150 ~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  226 (363)
T d2c5aa1         150 ESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGD  226 (363)
T ss_dssp             GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESC
T ss_pred             cccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCC
Confidence                   234579999999999999888764   68999999998887643322111  111111 1111111       


Q ss_pred             --CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          226 --PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       226 --~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                        +.+.+...+|++.+++.++...    .|..+++.+|..
T Consensus       227 g~~~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~  262 (363)
T d2c5aa1         227 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  262 (363)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCC
T ss_pred             CCeEEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCc
Confidence              2345777899999999888432    466778777654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=1.3e-15  Score=129.94  Aligned_cols=218  Identities=13%  Similarity=0.056  Sum_probs=150.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           20 TALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++|||||+|.||++++++|+++| ++|+.+++..+......     ...++.++++|+++.+++.+.+.       ..+|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~-------~~~d   69 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV-------KKCD   69 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH-------HHCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH-------hCCC
Confidence            58999999999999999999999 57888887655433222     13579999999998877655332       2489


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC----------------
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI----------------  162 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~----------------  162 (266)
                      ++||+|+......    ..++-...+++|+.++.++++.+    .+.+ -+++++||...+...                
T Consensus        70 ~Vih~a~~~~~~~----~~~~~~~~~~~nv~gt~~ll~~~----~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~  140 (342)
T d2blla1          70 VVLPLVAIATPIE----YTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (342)
T ss_dssp             EEEECBCCCCHHH----HHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             ccccccccccccc----cccCCcccccccccccccccccc----cccc-ccccccccccccccccccccccccccccccc
Confidence            9999999764321    22334567999999999998887    4443 466777776543321                


Q ss_pred             --CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-----ch-hHHHHHHHHhcC---------
Q 024551          163 --PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-----DL-LVQEYVKLIAKT---------  225 (266)
Q Consensus       163 --~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-----~~-~~~~~~~~~~~~---------  225 (266)
                        .+...|+.||.+.+.+++.+++.+   |+.+..+.|..+..+.......     .. ......+.....         
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  217 (342)
T d2blla1         141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  217 (342)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred             cCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCC
Confidence              123579999999999999988774   6888888888887764333221     11 111112222222         


Q ss_pred             CCCCCCCccchHHHHHHHhcCCCCCccccEEEeCCC
Q 024551          226 PLARSAEPNEISPLVAFLCLPAASYITGQVISIDGG  261 (266)
Q Consensus       226 ~~~~~~~~~eia~~~~~l~s~~~~~~~G~~l~vdgG  261 (266)
                      ..+.+...+|+++++..++........|+.+++.+|
T Consensus       218 ~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             eeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            223367889999999999865544556889988543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.1e-15  Score=129.07  Aligned_cols=214  Identities=12%  Similarity=0.071  Sum_probs=140.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh-HHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN-MINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      |+||||||+|-||++++++|.++|++|++++|... ..+.+ ... ....++.....|+.+.            .+ ..+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~-~~~-~~~~~~d~~~~~~~~~------------~~-~~~   66 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV-EHW-IGHENFELINHDVVEP------------LY-IEV   66 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT-GGG-TTCTTEEEEECCTTSC------------CC-CCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH-HHh-cCCCceEEEehHHHHH------------HH-cCC
Confidence            78999999999999999999999999999876221 11111 111 1122444444554322            12 368


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC----------------
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS----------------  161 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~----------------  161 (266)
                      |+|||+|+........    ++..+.+++|+.++.++++++    ++.+ -++|++||.+.+..                
T Consensus        67 d~VihlAa~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~~----~~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~  137 (312)
T d2b69a1          67 DQIYHLASPASPPNYM----YNPIKTLKTNTIGTLNMLGLA----KRVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNP  137 (312)
T ss_dssp             SEEEECCSCCSHHHHT----TCHHHHHHHHHHHHHHHHHHH----HHHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCS
T ss_pred             CEEEECcccCCchhHH----hCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEEChheecCCCCCCCCccccCCCCC
Confidence            9999999975432211    224567889999999998877    3333 48999999755421                


Q ss_pred             CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCC---------CCCCCC
Q 024551          162 IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTP---------LARSAE  232 (266)
Q Consensus       162 ~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  232 (266)
                      ..+...|+.||.+.+.+++.++..+   |+.+..+.|+.+..|........-......+.....+         .+.+..
T Consensus       138 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~  214 (312)
T d2b69a1         138 IGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQY  214 (312)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEE
Confidence            1245689999999999999988774   7899999999999876544322211121222222221         234566


Q ss_pred             ccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          233 PNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       233 ~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      .+|++++++.++...    .+..+++.+|..
T Consensus       215 v~D~~~~~~~~~~~~----~~~~~n~~~~~~  241 (312)
T d2b69a1         215 VSDLVNGLVALMNSN----VSSPVNLGNPEE  241 (312)
T ss_dssp             HHHHHHHHHHHHTSS----CCSCEEESCCCE
T ss_pred             HHHHHHHHHHHHhhc----cCCceEecCCcc
Confidence            799999998888432    344577766643

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.61  E-value=5.9e-15  Score=126.25  Aligned_cols=214  Identities=17%  Similarity=0.110  Sum_probs=147.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++||+||||||+|-||.+++++|.++|++|++++|+......+.+..+ ....+.++.+|++|++.+..++...      
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~~------   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF------   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH------
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-cccCCeEEEeeccChHhhhhhhhhc------
Confidence            689999999999999999999999999999999998765544443332 2346889999999999988877753      


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC------------CC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS------------IP  163 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~------------~~  163 (266)
                      .+|+++|.|+.....    .+.+..+..+++|+.++..+++++..   ......+++.|+......            ..
T Consensus        79 ~~~~v~~~aa~~~~~----~~~~~~~~~~~~Nv~g~~n~l~~~~~---~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          79 QPEIVFHMAAQPLVR----LSYSEPVETYSTNVMGTVYLLEAIRH---VGGVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             CCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH---HCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhhhhhhhcccccc----ccccCCccccccccccchhhhhhhhc---cccccccccccccccccccccccccccccccC
Confidence            589999999865321    12345677899999999999887742   222334554444433221            12


Q ss_pred             CchhhhhhHHHHHHHHHHHHHHhc------cCCcEEEEEecCcccCCCCCCCccchhHHHH-HHHHhcCC--------CC
Q 024551          164 RLSAYAASKGAINQLTKNLACEWA------TDSIRVNAVSPWAVNTQISPPDLNDLLVQEY-VKLIAKTP--------LA  228 (266)
Q Consensus       164 ~~~~y~~sK~al~~~~~~~a~el~------~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~--------~~  228 (266)
                      +...|+.+|...+.+++.++.++.      ..++.+..+.|+.+..+.....  ....... .......+        .+
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~  229 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL--DRIVPDILRAFEQSQPVIIRNPHAIR  229 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS--SCHHHHHHHHHHTTCCEECSCTTCEE
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh--hHHHHHHHHHHhCCCceEEeeccccc
Confidence            356799999999999999888754      3468899999988776542211  1111111 12222221        12


Q ss_pred             CCCCccchHHHHHHHhc
Q 024551          229 RSAEPNEISPLVAFLCL  245 (266)
Q Consensus       229 ~~~~~~eia~~~~~l~s  245 (266)
                      .+...+|++.++..++.
T Consensus       230 ~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         230 PWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             CCEETHHHHHHHHHHHH
T ss_pred             cccccccccchhhhhhh
Confidence            34557899998777664

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.59  E-value=2.5e-15  Score=128.48  Aligned_cols=205  Identities=18%  Similarity=0.132  Sum_probs=137.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh---hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ---NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      -|.||||||||-||++++++|.++|+.|.++.++.   .......+.  ..+.++.++.+|++|.+.+..++.       
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~~-------   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLAA-------   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHHT-------
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHHh-------
Confidence            37899999999999999999999998765544321   000000011  124588999999999999888754       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-------------
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-------------  161 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-------------  161 (266)
                       ..|.++|.|+......    ..++.++.+++|+.++.+++..+    ...+ .++|++||...+..             
T Consensus        73 -~~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~----~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~  142 (346)
T d1oc2a_          73 -KADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAA----RKYD-IRFHHVSTDEVYGDLPLREDLPGHGEG  142 (346)
T ss_dssp             -TCSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHH----HHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred             -hhhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhh----cccc-ccccccccceEecccCccccccccccC
Confidence             3677899988764321    12234567899999999998776    3333 47888877654421             


Q ss_pred             ----------CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC------
Q 024551          162 ----------IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT------  225 (266)
Q Consensus       162 ----------~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------  225 (266)
                                ..+...|+.+|.+.+.+++.+..+   .|+++..+.|+.+..|.....  ..............      
T Consensus       143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~vyGp~~~~~--~~~~~~i~~~~~~~~~~i~~  217 (346)
T d1oc2a_         143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS---FGVKATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYG  217 (346)
T ss_dssp             TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEESTTCCTT--SHHHHHHHHHHHTCCCEEET
T ss_pred             cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeecceeCCCCCcc--chhHHHHHHHHcCCceeEeC
Confidence                      112357999999999999988776   479999999999887643221  11111112222221      


Q ss_pred             ---CCCCCCCccchHHHHHHHhcC
Q 024551          226 ---PLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       226 ---~~~~~~~~~eia~~~~~l~s~  246 (266)
                         ..+.+...+|++++++.++..
T Consensus       218 ~g~~~r~~i~v~D~a~a~~~~~~~  241 (346)
T d1oc2a_         218 EGKNVRDWIHTNDHSTGVWAILTK  241 (346)
T ss_dssp             TSCCEEECEEHHHHHHHHHHHHHH
T ss_pred             CCCccccccchhhHHHHHHHHHhh
Confidence               223466789999998887753

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.59  E-value=6.1e-15  Score=124.81  Aligned_cols=218  Identities=19%  Similarity=0.165  Sum_probs=149.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEe------cCCh--hHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTC------GRDQ--NMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~------~r~~--~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ++|||||+|-||++++++|.++|+.|...      ++..  ..... ...+ ....++.++..|.++........     
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~-~~~~-~~~~~~~~~~~d~~~~~~~~~~~-----   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN-LAPV-DADPRLRFVHGDIRDAGLLAREL-----   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG-GGGG-TTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhH-hhhh-hcCCCeEEEEeccccchhhhccc-----
Confidence            68999999999999999999999865433      2111  00000 0111 12457889999999998766432     


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC---------
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI---------  162 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~---------  162 (266)
                         ..+|.++|+|+......    ..+..++.+++|+.++.++++++    .+.+..++|++||...+...         
T Consensus        75 ---~~~d~vi~~a~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~  143 (322)
T d1r6da_          75 ---RGVDAIVHFAAESHVDR----SIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTNQVYGSIDSGSWTESS  143 (322)
T ss_dssp             ---TTCCEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             ---cccceEEeecccccccc----cccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecceeecCCCCCCCCCCC
Confidence               35899999998753322    23445567899999999998887    45556789999998765432         


Q ss_pred             --CCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC---------CCCC
Q 024551          163 --PRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL---------ARSA  231 (266)
Q Consensus       163 --~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  231 (266)
                        .+...|+.+|.+.+.+++.+++++   |+.+..+.|+.+-.|......  -......+.....++         +.+.
T Consensus       144 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~--~i~~~i~~~~~~~~i~v~~~g~~~r~~i  218 (322)
T d1r6da_         144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEK--LIPLFVTNLLDGGTLPLYGDGANVREWV  218 (322)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTS--HHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCc--HHHHHHHHHHcCCCcEEecCCCeEEccE
Confidence              234689999999999999998764   689999999999886543221  111111222222221         2356


Q ss_pred             CccchHHHHHHHhcCCCCCccccEEEeCCCcc
Q 024551          232 EPNEISPLVAFLCLPAASYITGQVISIDGGYT  263 (266)
Q Consensus       232 ~~~eia~~~~~l~s~~~~~~~G~~l~vdgG~~  263 (266)
                      ..+|+|++++.++....   .|+.+++..|..
T Consensus       219 ~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~  247 (322)
T d1r6da_         219 HTDDHCRGIALVLAGGR---AGEIYHIGGGLE  247 (322)
T ss_dssp             EHHHHHHHHHHHHHHCC---TTCEEEECCCCE
T ss_pred             EHHHHHHHHHHHHhCCC---CCCeeEEeeccc
Confidence            78999999999986433   578888876654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=1.7e-14  Score=121.40  Aligned_cols=191  Identities=13%  Similarity=0.082  Sum_probs=135.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      -|+||||||+|.||++++++|+++|+.|+++++..                    .+|+.+.+.+..++..      ..+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~------~~~   55 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFAS------ERI   55 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHH------HCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhh------cCC
Confidence            47899999999999999999999999988776533                    2699999998888763      258


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC--------------
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP--------------  163 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~--------------  163 (266)
                      |.++|+|+.......   ...+..+.+++|+.++.++++++    .+.+-.++|++||.+.+.+..              
T Consensus        56 d~v~~~a~~~~~~~~---~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          56 DQVYLAAAKVGGIVA---NNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             SEEEECCCCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             CEEEEcchhcccccc---chhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            999999976432111   23345566889999999998877    444456899999988654221              


Q ss_pred             --CchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc-----hhHH-HHHHHH-h---------cC
Q 024551          164 --RLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND-----LLVQ-EYVKLI-A---------KT  225 (266)
Q Consensus       164 --~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~-----~~~~-~~~~~~-~---------~~  225 (266)
                        ....|+.||.+.+.+++.+.++.   |+++..+.|+.+-.|........     .... ...... .         ..
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  205 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT  205 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCc
Confidence              12469999999999999998764   78999999998887654322111     0110 001111 1         12


Q ss_pred             CCCCCCCccchHHHHHHHh
Q 024551          226 PLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       226 ~~~~~~~~~eia~~~~~l~  244 (266)
                      +.+.+...+|++..+..++
T Consensus       206 ~~~~~~~v~d~~~~~~~~~  224 (315)
T d1e6ua_         206 PMREFLHVDDMAAASIHVM  224 (315)
T ss_dssp             CEECEEEHHHHHHHHHHHH
T ss_pred             eEEEEEEeehhHHHHHHhh
Confidence            3345567788888888776

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.56  E-value=1.3e-13  Score=119.22  Aligned_cols=175  Identities=19%  Similarity=0.141  Sum_probs=128.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHH-CCCeEEEecC---------ChhHHHHHHHHHHhc--------CCeeEEEeccCCCH
Q 024551           18 GMTALVTGGTRGIGYAIVEELAR-FGASVHTCGR---------DQNMINERIQEWESK--------GFKVTGSVCDLSFG   79 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~-~G~~v~~~~r---------~~~~~~~~~~~l~~~--------~~~~~~~~~D~~~~   79 (266)
                      +++||||||+|-||++++++|++ .|++|+++++         ..+..+.....+...        .....++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46799999999999999999986 6899998763         112223333333221        23678899999999


Q ss_pred             HHHHHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Q 024551           80 DQREKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGA  159 (266)
Q Consensus        80 ~~i~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~  159 (266)
                      +.+++++...     .++|+++|.|+......    ..+.....+++|+.++..++.++    ++.+..+++++++....
T Consensus        82 ~~l~~~~~~~-----~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~----~~~~~~~~~~~~s~~~~  148 (383)
T d1gy8a_          82 DFLNGVFTRH-----GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF  148 (383)
T ss_dssp             HHHHHHHHHS-----CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT
T ss_pred             HHhhhhhhcc-----ceeehhhcccccccccc----cccccccccccccccccccchhh----hccCCcccccccccccc
Confidence            9988888754     56999999999754321    22335567889999999998777    45555688887776654


Q ss_pred             CC------------------CCCchhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCC
Q 024551          160 IS------------------IPRLSAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPP  208 (266)
Q Consensus       160 ~~------------------~~~~~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~  208 (266)
                      ..                  ..+...|+.+|.+.+.+++.+...   +|+.+..+.|+.+..+....
T Consensus       149 ~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~~  212 (383)
T d1gy8a_         149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHEDG  212 (383)
T ss_dssp             BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTTS
T ss_pred             cccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCccc
Confidence            31                  123568999999999999988766   46889999998887665443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.55  E-value=2e-14  Score=115.58  Aligned_cols=214  Identities=12%  Similarity=0.054  Sum_probs=136.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCe--EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGAS--VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++||||||+|.||++++++|+++|++  |+...|+++..+       ....++.++.+|+++.+++.++++        .
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~--------~   68 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KIGGEADVFIGDITDADSINPAFQ--------G   68 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HTTCCTTEEECCTTSHHHHHHHHT--------T
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-------hccCCcEEEEeeeccccccccccc--------c
Confidence            69999999999999999999999965  566788886543       223577889999999999877664        4


Q ss_pred             ccEEEeccccccccCC---------CCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh
Q 024551           97 LNILVNNAALVVMKRA---------TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        97 id~lv~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      +|.+||+++.......         .......+.....+|+.++..+....    .....+...+.++.....+......
T Consensus        69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~~~~~~~~  144 (252)
T d2q46a1          69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA----KVAGVKHIVVVGSMGGTNPDHPLNK  144 (252)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHH----HHHTCSEEEEEEETTTTCTTCGGGG
T ss_pred             ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccc----ccccccccccccccccCCCCccccc
Confidence            8999999986532111         11112234455677888887776554    3444678888888776655444433


Q ss_pred             hhhhHHHHH-HHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          168 YAASKGAIN-QLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       168 y~~sK~al~-~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      +..++.... .....+   ....|+++..+.||.+..+...........   .. ........+...+|+|++++.++..
T Consensus       145 ~~~~~~~~~~~~~~~~---~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~---~~-~~~~~~~~~i~~~Dva~a~~~~l~~  217 (252)
T d2q46a1         145 LGNGNILVWKRKAEQY---LADSGTPYTIIRAGGLLDKEGGVRELLVGK---DD-ELLQTDTKTVPRADVAEVCIQALLF  217 (252)
T ss_dssp             GGGCCHHHHHHHHHHH---HHHSSSCEEEEEECEEECSCTTSSCEEEES---TT-GGGGSSCCEEEHHHHHHHHHHHTTC
T ss_pred             ccccchhhhhhhhhhh---hhcccccceeecceEEECCCcchhhhhhcc---Cc-ccccCCCCeEEHHHHHHHHHHHhCC
Confidence            333333222 222222   234679999999999877643221100000   00 0001112356789999999988854


Q ss_pred             CCCCccccEEEeCC
Q 024551          247 AASYITGQVISIDG  260 (266)
Q Consensus       247 ~~~~~~G~~l~vdg  260 (266)
                      +  ...|+.+++-+
T Consensus       218 ~--~~~g~~~~i~~  229 (252)
T d2q46a1         218 E--EAKNKAFDLGS  229 (252)
T ss_dssp             G--GGTTEEEEEEE
T ss_pred             c--cccCcEEEEee
Confidence            3  25688887754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.6e-15  Score=121.50  Aligned_cols=197  Identities=15%  Similarity=0.126  Sum_probs=132.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +.+++|++|||||||.||++++++|.++|.  +|++++|++.....      .....+....+|+.+.+++..       
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~-------   76 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYAS-------   76 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGG-------
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeecccccccccc-------
Confidence            457889999999999999999999999995  79999997653221      112356666788877655433       


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .+ ...|++||++|...       .........++|+..+..+++.+    .+.+-.++|++|+......  ....|..+
T Consensus        77 ~~-~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~~~~--~~~~Y~~~  142 (232)
T d2bkaa1          77 AF-QGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQV  142 (232)
T ss_dssp             GG-SSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHH
T ss_pred             cc-cccccccccccccc-------cccchhhhhhhcccccceeeecc----cccCccccccCCccccccC--ccchhHHH
Confidence            23 34899999998642       23345566788999988888776    4555678999999876543  34679999


Q ss_pred             HHHHHHHHHHHHHHhccCCc-EEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCC----CCCCCccchHHHHHHHhcC
Q 024551          172 KGAINQLTKNLACEWATDSI-RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPL----ARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi-~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~eia~~~~~l~s~  246 (266)
                      |...+...+.       .+. ++..+.||.+..+......   ............+.    .+..+++|+|++++.++..
T Consensus       143 K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~  212 (232)
T d2bkaa1         143 KGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRP---GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVR  212 (232)
T ss_dssp             HHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGSH---HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTS
T ss_pred             HHHhhhcccc-------ccccceEEecCceeecCCCcCcH---HHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhc
Confidence            9988866543       233 5777899999876432211   11111122222111    2345569999998887754


Q ss_pred             C
Q 024551          247 A  247 (266)
Q Consensus       247 ~  247 (266)
                      .
T Consensus       213 ~  213 (232)
T d2bkaa1         213 P  213 (232)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.32  E-value=1.9e-12  Score=102.61  Aligned_cols=183  Identities=13%  Similarity=0.132  Sum_probs=119.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      -|++|||||||.||++++++|.++|+  +|+..+|++..          ...++   ..+..|..++       .+....
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~~---~~~~~d~~~~-------~~~~~~   61 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRL---DNPVGPLAEL-------LPQLDG   61 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTE---ECCBSCHHHH-------GGGCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hcccc---cccccchhhh-------hhcccc
Confidence            48999999999999999999999997  57777775421          11122   3344444332       222225


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGAI  175 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~al  175 (266)
                      .+|.+|+++|......      ..-+...++|+.++..+++.+    ++.+-.+++++||..+..  .....|..+|...
T Consensus        62 ~~d~vi~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~  129 (212)
T d2a35a1          62 SIDTAFCCLGTTIKEA------GSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADA--KSSIFYNRVKGEL  129 (212)
T ss_dssp             CCSEEEECCCCCHHHH------SSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSHHHHHHHHH
T ss_pred             chheeeeeeeeecccc------ccccccccchhhhhhhccccc----cccccccccccccccccc--ccccchhHHHHHH
Confidence            6899999998653211      112456788999998888776    566667999999977553  3357899999887


Q ss_pred             HHHHHHHHHHhccCCc-EEEEEecCcccCCCCCCCccchhHHHHHHHHhcCCCC-------CCCCccchHHHHHHHhcCC
Q 024551          176 NQLTKNLACEWATDSI-RVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKTPLA-------RSAEPNEISPLVAFLCLPA  247 (266)
Q Consensus       176 ~~~~~~~a~el~~~gi-~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~eia~~~~~l~s~~  247 (266)
                      +...+       ..+. ++..+.|+.+..+..........         ..+..       +....+|+|+++++++.++
T Consensus       130 E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~~---------~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         130 EQALQ-------EQGWPQLTIARPSLLFGPREEFRLAEIL---------AAPIARILPGKYHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             HHHHT-------TSCCSEEEEEECCSEESTTSCEEGGGGT---------TCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             hhhcc-------ccccccceeeCCcceeCCcccccHHHHH---------HHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence            76554       2333 57788999987654332111100         01111       1245799999999988654


Q ss_pred             C
Q 024551          248 A  248 (266)
Q Consensus       248 ~  248 (266)
                      .
T Consensus       194 ~  194 (212)
T d2a35a1         194 G  194 (212)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.26  E-value=4.5e-16  Score=122.26  Aligned_cols=170  Identities=8%  Similarity=0.083  Sum_probs=97.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCC--------------CHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS--------------FGDQREKL   85 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~--------------~~~~i~~~   85 (266)
                      ++.|+||+|++|+++|+.|+++|++|++.+|++++++++.+++...+........|..              ....+...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA   81 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence            4678888899999999999999999999999999999999998765433322222211              11111111


Q ss_pred             HHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCc
Q 024551           86 IETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRL  165 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~  165 (266)
                      .......  ............             +......++.+...+.+.....+........+++.+..........
T Consensus        82 ~~~~~~~--~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (212)
T d1jaya_          82 RDLKNIL--REKIVVSPLVPV-------------SRGAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEK  146 (212)
T ss_dssp             HHTHHHH--TTSEEEECCCCE-------------ECCTTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTCC
T ss_pred             HHhhhhh--cccccccccccc-------------ccccccccccccchhhhhhhhhhhhhcccccceeecHHHhcCcccc
Confidence            1111111  011111111111             1111222333322333334444444433333333333333344455


Q ss_pred             hhhhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCC
Q 024551          166 SAYAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQ  204 (266)
Q Consensus       166 ~~y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~  204 (266)
                      ..|..++++....++..+.++..+.+.++.++||.+++.
T Consensus       147 ~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a  185 (212)
T d1jaya_         147 FDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNS  185 (212)
T ss_dssp             CCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGH
T ss_pred             cCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHH
Confidence            667777777778888888887777889999999988763

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.19  E-value=7.3e-11  Score=97.37  Aligned_cols=129  Identities=19%  Similarity=0.195  Sum_probs=93.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      ++|||||+|-||++++++|.++|..|.+..|+..                  +..|++|.+.++++++..      ++|+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~------~~D~   57 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE------------------FCGDFSNPKGVAETVRKL------RPDV   57 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSS------------------SCCCTTCHHHHHHHHHHH------CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEECCCcc------------------ccCcCCCHHHHHHHHHHc------CCCE
Confidence            5999999999999999999999975555443321                  347999999999888754      5899


Q ss_pred             EEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----------CCchhh
Q 024551          100 LVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----------PRLSAY  168 (266)
Q Consensus       100 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----------~~~~~y  168 (266)
                      |||+||........+    .-+..++.|+.++..+..++    ++. ..+++++||.......           .+...|
T Consensus        58 Vih~Aa~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y  128 (298)
T d1n2sa_          58 IVNAAAHTAVDKAES----EPELAQLLNATSVEAIAKAA----NET-GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (298)
T ss_dssp             EEECCCCCCHHHHTT----CHHHHHHHHTHHHHHHHHHH----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             EEEeccccccccccc----Cccccccccccccccchhhh----hcc-ccccccccccccccCCCCCCCccccccCCCchH
Confidence            999999764332222    23456788999998887776    333 4678888877644321           234689


Q ss_pred             hhhHHHHHHHHHH
Q 024551          169 AASKGAINQLTKN  181 (266)
Q Consensus       169 ~~sK~al~~~~~~  181 (266)
                      +.+|.+.+.+.+.
T Consensus       129 ~~~k~~~e~~~~~  141 (298)
T d1n2sa_         129 GKTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhHHh
Confidence            9999888776653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.16  E-value=6.1e-11  Score=100.78  Aligned_cols=206  Identities=14%  Similarity=0.076  Sum_probs=122.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHH-HHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQR-EKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i-~~~~~~~~~~~~~   95 (266)
                      +.|+++||||||.||++++++|.++|++|+++.|+.+....  +.+.. ...+.+++.|+.|..++ +.++        .
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~-~~~v~~~~gD~~d~~~~~~~a~--------~   70 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-IPNVTLFQGPLLNNVPLMDTLF--------E   70 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-STTEEEEESCCTTCHHHHHHHH--------T
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc-cCCCEEEEeeCCCcHHHHHHHh--------c
Confidence            46999999999999999999999999999999998765432  22222 24688999999987653 2222        3


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCC--CchhhhhhHH
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIP--RLSAYAASKG  173 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~--~~~~y~~sK~  173 (266)
                      ..|.++.+.....                ..++....+++.++    .+.+..++++.||.......+  ....|..+|.
T Consensus        71 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~  130 (350)
T d1xgka_          71 GAHLAFINTTSQA----------------GDEIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF  130 (350)
T ss_dssp             TCSEEEECCCSTT----------------SCHHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred             CCceEEeeccccc----------------chhhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhhHH
Confidence            4677766543211                11222233344433    444556788888866544322  3356677787


Q ss_pred             HHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc---hhHHHHHHHHhcCCCC-----CCCC-ccchHHHHHHHh
Q 024551          174 AINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND---LLVQEYVKLIAKTPLA-----RSAE-PNEISPLVAFLC  244 (266)
Q Consensus       174 al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~-----~~~~-~~eia~~~~~l~  244 (266)
                      ..+.+.+.       .++....+.||++...........   ..... .......|..     .+.. .+|+++++..++
T Consensus       131 ~~~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l  202 (350)
T d1xgka_         131 TVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPD-GTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF  202 (350)
T ss_dssp             HHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTT-SCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHh-------hccCceeeeeceeecccccccccccccccccc-ccceeeecccCCCcceEEEeHHHHHHHHHHHH
Confidence            76655443       357778888887655432211110   00000 0000001111     0122 368999988888


Q ss_pred             cCCCCCccccEEEeCCC
Q 024551          245 LPAASYITGQVISIDGG  261 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG  261 (266)
                      .+......|+.+.+.|.
T Consensus       203 ~~~~~~~~G~~~~~~g~  219 (350)
T d1xgka_         203 KDGPQKWNGHRIALTFE  219 (350)
T ss_dssp             HHCHHHHTTCEEEECSE
T ss_pred             hCChhhcCCeEEEEeCC
Confidence            65444567888887654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.12  E-value=1.1e-09  Score=89.52  Aligned_cols=180  Identities=17%  Similarity=0.119  Sum_probs=120.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      +++|||||||.||++++++|.++|+.|+.++|++                     +|++|.++++++++..      ++|
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~------~~d   54 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK------KPN   54 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH------CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc------CCC
Confidence            3589999999999999999999999999998853                     5999999998887753      579


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-----------CCCCchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAI-----------SIPRLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~-----------~~~~~~~  167 (266)
                      ++||+++......    .....+..++.|+.....+....    ... ...+++.||.....           ...+...
T Consensus        55 ~vih~a~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~----~~~-~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~  125 (281)
T d1vl0a_          55 VVINCAAHTAVDK----CEEQYDLAYKINAIGPKNLAAAA----YSV-GAEIVQISTDYVFDGEAKEPITEFDEVNPQSA  125 (281)
T ss_dssp             EEEECCCCCCHHH----HHHCHHHHHHHHTHHHHHHHHHH----HHH-TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred             EEEeecccccccc----ccccchhhccccccccccccccc----ccc-cccccccccceeeeccccccccccccccchhh
Confidence            9999998754321    22233556677777776665554    332 24666666654322           1224567


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccchhHHHHHHHHhcC-------CCCCCCCccchHHHH
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLNDLLVQEYVKLIAKT-------PLARSAEPNEISPLV  240 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~eia~~~  240 (266)
                      |+.+|...+.+.+.       .+.....+.|+.+..+...  +....   ........       ..+.+...+|+++++
T Consensus       126 ~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~  193 (281)
T d1vl0a_         126 YGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNN--FVKTM---INLGKTHDELKVVHDQVGTPTSTVDLARVV  193 (281)
T ss_dssp             HHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSC--HHHHH---HHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred             hhhhhhHHHHHHHH-------hCCCccccceeEEeCCCcc--cccch---hhhhccCCceeecCCceeccchhhhhhhhh
Confidence            88888887776653       2467778999998765321  11111   11221221       123456789999999


Q ss_pred             HHHhcC
Q 024551          241 AFLCLP  246 (266)
Q Consensus       241 ~~l~s~  246 (266)
                      .+++..
T Consensus       194 ~~~~~~  199 (281)
T d1vl0a_         194 LKVIDE  199 (281)
T ss_dssp             HHHHHH
T ss_pred             hhhhhh
Confidence            999854

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.10  E-value=9.9e-10  Score=90.88  Aligned_cols=206  Identities=13%  Similarity=0.058  Sum_probs=118.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHH--H--HHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMI--N--ERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~--~--~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++||||||||.||++++++|.++|++|++++|+....  .  +....+.  ...+.++++|++|.+++.+.+.       
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~-------   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK-------   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhcc-------
Confidence            4699999999999999999999999999999965321  1  1122222  3468889999999988777654       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCC-----CCchhhh
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISI-----PRLSAYA  169 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~-----~~~~~y~  169 (266)
                       ..+.++++++...               ...|..+...++.++    .+....++++.||.+.....     .....|.
T Consensus        75 -~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~  134 (312)
T d1qyda_          75 -QVDVVISALAGGV---------------LSHHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSITF  134 (312)
T ss_dssp             -TCSEEEECCCCSS---------------SSTTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred             -Ccchhhhhhhhcc---------------cccchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhhhh
Confidence             3678888876432               223445555555444    44445677777775443222     1223444


Q ss_pred             hhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc---ch-h-HHHHHHHHhcCCCCCCCCccchHHHHHHHh
Q 024551          170 ASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN---DL-L-VQEYVKLIAKTPLARSAEPNEISPLVAFLC  244 (266)
Q Consensus       170 ~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~---~~-~-~~~~~~~~~~~~~~~~~~~~eia~~~~~l~  244 (266)
                      .+|...+.    +.   ...++.+..+.|+.+..+.......   .. . .....-.........+...+|+|++++.++
T Consensus       135 ~~~~~~~~----~~---~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l  207 (312)
T d1qyda_         135 IDKRKVRR----AI---EAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI  207 (312)
T ss_dssp             HHHHHHHH----HH---HHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHHH----hh---cccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHh
Confidence            44444333    22   2356777888888775422111000   00 0 000000000011223577899999999888


Q ss_pred             cCCCCCccccEEEeCCC
Q 024551          245 LPAASYITGQVISIDGG  261 (266)
Q Consensus       245 s~~~~~~~G~~l~vdgG  261 (266)
                      ... ...++..+.+.++
T Consensus       208 ~~~-~~~~~~~~~~~~~  223 (312)
T d1qyda_         208 DDP-QTLNKTMYIRPPM  223 (312)
T ss_dssp             TCG-GGSSSEEECCCGG
T ss_pred             cCc-cccCceEEEeCCC
Confidence            542 3334444455444

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.01  E-value=6.3e-09  Score=85.33  Aligned_cols=195  Identities=13%  Similarity=0.070  Sum_probs=112.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHH--HHHHHHh-cCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINE--RIQEWES-KGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~--~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      -|+||||||||.||++++++|.++|++|++++|+......  ....+.. ....+.++.+|+.+.......++       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence            4789999999999999999999999999999996543211  1111111 13457788999999988777665       


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhhHHH
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAASKGA  174 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~sK~a  174 (266)
                       ..+.++++++....                   .+...+.+++    ...+...+++.||............+...+..
T Consensus        76 -~~~~vi~~~~~~~~-------------------~~~~~~~~a~----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  131 (307)
T d1qyca_          76 -NVDVVISTVGSLQI-------------------ESQVNIIKAI----KEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFE  131 (307)
T ss_dssp             -TCSEEEECCCGGGS-------------------GGGHHHHHHH----HHHCCCSEEECSCCSSCTTSCCCCTTHHHHHH
T ss_pred             -hceeeeeccccccc-------------------chhhHHHHHH----HHhccccceeeecccccccccccccccccccc
Confidence             36888888875321                   1222232332    34444577777765544333333333333333


Q ss_pred             HHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCccc--hhHH--HHHHHHhcCCCCCCCCccchHHHHHHHhcC
Q 024551          175 INQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLND--LLVQ--EYVKLIAKTPLARSAEPNEISPLVAFLCLP  246 (266)
Q Consensus       175 l~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~eia~~~~~l~s~  246 (266)
                      .........   ...|+....+.|+.+..+........  ....  .............+...+|+|++++.++..
T Consensus       132 ~~~~~~~~~---~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  204 (307)
T d1qyca_         132 VKAKVRRAI---EAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD  204 (307)
T ss_dssp             HHHHHHHHH---HHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSC
T ss_pred             ccccccchh---hccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcC
Confidence            322232222   23467788888887764322111000  0000  000000011223467789999999988854

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.83  E-value=1.8e-08  Score=82.78  Aligned_cols=213  Identities=13%  Similarity=0.114  Sum_probs=121.6

Q ss_pred             EEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-CCccc
Q 024551           21 ALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-DGKLN   98 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~id   98 (266)
                      ||||||+|-||++++++|+++|+ .|+++++-... .+... +.         ..++.+..+.....+...... ...++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFVN-LV---------DLNIADYMDKEDFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGHH-HH---------TSCCSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhhc-cc---------ccchhhhccchHHHHHHhhhhcccchh
Confidence            79999999999999999999996 57776532211 01111 11         112222222233344433321 25688


Q ss_pred             EEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC-----------CCCchh
Q 024551           99 ILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS-----------IPRLSA  167 (266)
Q Consensus        99 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~-----------~~~~~~  167 (266)
                      +++|.|+......   .+   .+...+.|+.+...+.+++.    ..+- ++++.||.....+           .++...
T Consensus        71 ~i~~~aa~~~~~~---~~---~~~~~~~~~~~~~~~l~~~~----~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~  139 (307)
T d1eq2a_          71 AIFHEGACSSTTE---WD---GKYMMDNNYQYSKELLHYCL----EREI-PFLYASSAATYGGRTSDFIESREYEKPLNV  139 (307)
T ss_dssp             EEEECCSCCCTTC---CC---HHHHHHHTHHHHHHHHHHHH----HHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             hhhhhcccccccc---cc---cccccccccccccccccccc----cccc-cccccccccccccccccccccccccccccc
Confidence            9999887543221   12   34456777888877766653    3333 4555555444332           234568


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEecCcccCCCCCCCcc-chhHHHH-HHHH----------hcCCCCCCCCccc
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVSPWAVNTQISPPDLN-DLLVQEY-VKLI----------AKTPLARSAEPNE  235 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~-~~~~----------~~~~~~~~~~~~e  235 (266)
                      |+.+|.+.+.+++.+..+   .++.+..+.|..+..|....... ....... ..+.          .....+.+...+|
T Consensus       140 Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d  216 (307)
T d1eq2a_         140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (307)
T ss_dssp             HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             cccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeeccc
Confidence            999999999999887655   56788888888777664332211 1111111 1111          1112335566789


Q ss_pred             hHHHHHHHhcCCCCCccccEEEeCCCc
Q 024551          236 ISPLVAFLCLPAASYITGQVISIDGGY  262 (266)
Q Consensus       236 ia~~~~~l~s~~~~~~~G~~l~vdgG~  262 (266)
                      ++.++..++....    ...+.+..|.
T Consensus       217 ~~~~~~~~~~~~~----~~~~~~~~~~  239 (307)
T d1eq2a_         217 VADVNLWFLENGV----SGIFNLGTGR  239 (307)
T ss_dssp             HHHHHHHHHHHCC----CEEEEESCSC
T ss_pred             HHHHHHHHhhhcc----cccccccccc
Confidence            9999988775332    2345665554

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.19  E-value=6.9e-06  Score=62.50  Aligned_cols=84  Identities=18%  Similarity=0.257  Sum_probs=63.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHH---HHHhcCCeeEEEeccCCCHHHHHHHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQ---EWESKGFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~---~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .++++|+|+|.|+ ||.|++++.+|.+.|.+ +.++.|+++..+++.+   .+.... .......|+.+.+++.....  
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhhc--
Confidence            4689999999999 68999999999999975 8899998776665444   443332 34455788888887655443  


Q ss_pred             HhhcCCcccEEEeccccc
Q 024551           90 SSVFDGKLNILVNNAALV  107 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~  107 (266)
                            ..|++||+....
T Consensus        90 ------~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ------SADILTNGTKVG  101 (182)
T ss_dssp             ------TCSEEEECSSTT
T ss_pred             ------ccceeccccCCc
Confidence                  579999998754

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.19  E-value=5.2e-06  Score=63.12  Aligned_cols=80  Identities=16%  Similarity=0.177  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +|++|||+||++++|.+.+.-....|++|+.+++++++.+.    +++.+....+   |-+++...+...+...   +..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~----~~~~Ga~~vi---~~~~~~~~~~~~~~~~---~~G   98 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----LKQIGFDAAF---NYKTVNSLEEALKKAS---PDG   98 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCSEEE---ETTSCSCHHHHHHHHC---TTC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH----HHhhhhhhhc---ccccccHHHHHHHHhh---cCC
Confidence            58999999999999999999999999999999998876543    3334544433   3333333333333221   246


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++++.|.
T Consensus        99 vd~v~D~vG~  108 (182)
T d1v3va2          99 YDCYFDNVGG  108 (182)
T ss_dssp             EEEEEESSCH
T ss_pred             CceeEEecCc
Confidence            9999999984

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.17  E-value=4.2e-06  Score=63.01  Aligned_cols=78  Identities=13%  Similarity=0.252  Sum_probs=60.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++||.|+|.|+ ||.+++++.+|.+.|.+|.++.|+.++.+++++.+...+ .+..+  +..+.           +  
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~-----------~--   76 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDEL-----------E--   76 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG-----------T--
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-ccccc--ccccc-----------c--
Confidence            4678999999998 788999999999999999999999999999888876543 23222  22211           1  


Q ss_pred             CCcccEEEecccccc
Q 024551           94 DGKLNILVNNAALVV  108 (266)
Q Consensus        94 ~~~id~lv~~ag~~~  108 (266)
                      ....|++||+.....
T Consensus        77 ~~~~dliIN~Tp~G~   91 (170)
T d1nyta1          77 GHEFDLIINATSSGI   91 (170)
T ss_dssp             TCCCSEEEECCSCGG
T ss_pred             ccccceeecccccCc
Confidence            146899999987543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.02  E-value=6.3e-06  Score=63.09  Aligned_cols=89  Identities=15%  Similarity=0.112  Sum_probs=61.6

Q ss_pred             CCCEEEE-ecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALV-TGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlI-tGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++| +||++++|.+.+.-....|++|+.+.|+.+..++..+.+++.|....+.. |-.+..+..+.+.++.+..++
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~-~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE-DQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH-HHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEec-cccchhHHHHHHHHHHhhccC
Confidence            3555555 79999999999888778899999999988888888888877775543322 211222333444444444446


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|+++.+.|.
T Consensus       107 ~vdvv~D~vg~  117 (189)
T d1gu7a2         107 EAKLALNCVGG  117 (189)
T ss_dssp             CEEEEEESSCH
T ss_pred             CceEEEECCCc
Confidence            79999998873

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.5e-05  Score=60.04  Aligned_cols=79  Identities=16%  Similarity=0.231  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++|||+||++++|...+......|++|+.+++++++.+..    ++.|....   .|-++++-.+++.+...   +..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~~Ga~~v---i~~~~~~~~~~i~~~t~---~~g   97 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHEV---FNHREVNYIDKIKKYVG---EKG   97 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE---EETTSTTHHHHHHHHHC---TTC
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cccCcccc---cccccccHHHHhhhhhc---cCC
Confidence            689999999999999999998888999999999887765433    33444332   25555543333322221   245


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|+++.+.|
T Consensus        98 ~d~v~d~~g  106 (174)
T d1yb5a2          98 IDIIIEMLA  106 (174)
T ss_dssp             EEEEEESCH
T ss_pred             ceEEeeccc
Confidence            999999877

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.01  E-value=1.9e-05  Score=59.08  Aligned_cols=83  Identities=25%  Similarity=0.303  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|.+++|+| ++++|...+..+...|++|+++++++++++...+    .+....+ ..|-. .++.....+++.+..+..
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga~~~~-~~~~~-~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADVTL-VVDPA-KEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEE-ECCTT-TSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCCcEEE-ecccc-ccccchhhhhhhcccccC
Confidence            578999997 5899999999888899999999999988654433    3433322 22221 223344555666655557


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|++|.++|.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            9999999985

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.00  E-value=1.4e-05  Score=59.96  Aligned_cols=75  Identities=12%  Similarity=0.078  Sum_probs=56.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|+++|.|| |.+|+.+|+.|+++|++|++++|+.++++++.+.+    ........+..+.......+.        ..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i~--------~~   68 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA--------KH   68 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHHT--------TS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhhh--------cc
Confidence            689999987 99999999999999999999999999888776643    334455566666666555443        34


Q ss_pred             cEEEeccc
Q 024551           98 NILVNNAA  105 (266)
Q Consensus        98 d~lv~~ag  105 (266)
                      |.++....
T Consensus        69 ~~~i~~~~   76 (182)
T d1e5qa1          69 DLVISLIP   76 (182)
T ss_dssp             SEEEECSC
T ss_pred             ceeEeecc
Confidence            66665443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.96  E-value=1.4e-05  Score=60.47  Aligned_cols=106  Identities=17%  Similarity=0.093  Sum_probs=67.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      -+|++|||+||+||+|.....-....|++|+.+++++++.+...    +.|....+   |-++.  ..+   .+....++
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~lGa~~vi---~~~~~--~~~---~~~~~~~~   97 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKEVL---AREDV--MAE---RIRPLDKQ   97 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSEEE---ECC--------------CCSC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hcccceee---ecchh--HHH---HHHHhhcc
Confidence            35899999999999999988888889999999999887754333    33444322   21211  111   11222235


Q ss_pred             cccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCC
Q 024551           96 KLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAIS  161 (266)
Q Consensus        96 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~  161 (266)
                      .+|+++.+.|...        ++.                  .+..|+.  +|+++.++...+...
T Consensus        98 gvD~vid~vgg~~--------~~~------------------~l~~l~~--~Griv~~G~~~g~~~  135 (176)
T d1xa0a2          98 RWAAAVDPVGGRT--------LAT------------------VLSRMRY--GGAVAVSGLTGGAEV  135 (176)
T ss_dssp             CEEEEEECSTTTT--------HHH------------------HHHTEEE--EEEEEECSCCSSSCC
T ss_pred             CcCEEEEcCCchh--------HHH------------------HHHHhCC--CceEEEeecccCccc
Confidence            7999999998532        121                  2334444  589999988765543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.95  E-value=3.7e-05  Score=57.68  Aligned_cols=80  Identities=13%  Similarity=0.224  Sum_probs=60.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .++++|.++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+++++.+.... .+..+..|-.              ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~~   77 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------PL   77 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------CC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------cc
Confidence            4678999999988 778999999999988999999999999999999886543 4444443311              11


Q ss_pred             CCcccEEEecccccccc
Q 024551           94 DGKLNILVNNAALVVMK  110 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~  110 (266)
                       ...|++||+.......
T Consensus        78 -~~~diiIN~tp~g~~~   93 (171)
T d1p77a1          78 -QTYDLVINATSAGLSG   93 (171)
T ss_dssp             -SCCSEEEECCCC----
T ss_pred             -cccceeeecccccccc
Confidence             4689999998865433

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.94  E-value=2.3e-05  Score=58.13  Aligned_cols=74  Identities=20%  Similarity=0.235  Sum_probs=56.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++|+++|.|+ |++|+.+++.|.++|+ ++.++.|+.++.+++++++.   ..+  .  +   .+++...+       
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~~~--~--~---~~~~~~~l-------   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA--V--R---FDELVDHL-------   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE--C--C---GGGHHHHH-------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---ccc--c--c---chhHHHHh-------
Confidence            689999999998 9999999999999998 58899999999888888762   222  1  2   22333222       


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                       ...|++|++.+..
T Consensus        83 -~~~Divi~atss~   95 (159)
T d1gpja2          83 -ARSDVVVSATAAP   95 (159)
T ss_dssp             -HTCSEEEECCSSS
T ss_pred             -ccCCEEEEecCCC
Confidence             2589999998843

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.91  E-value=2e-05  Score=59.63  Aligned_cols=78  Identities=19%  Similarity=0.221  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-CC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-DG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~   95 (266)
                      +|++|||+||++++|...+..+...|++|+++++++++.+    .+++.|....   .|-++++-.    +++.+.. +.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~----~l~~~Ga~~v---i~~~~~~~~----~~v~~~t~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLSRLGVEYV---GDSRSVDFA----DEILELTDGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHTTCCSEE---EETTCSTHH----HHHHHHTTTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc----cccccccccc---ccCCccCHH----HHHHHHhCCC
Confidence            4899999999999999999988889999999998887653    3344454432   244444322    3333332 24


Q ss_pred             cccEEEeccc
Q 024551           96 KLNILVNNAA  105 (266)
Q Consensus        96 ~id~lv~~ag  105 (266)
                      .+|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999988

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=3.4e-05  Score=58.09  Aligned_cols=80  Identities=13%  Similarity=0.165  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++|+|+||++++|...+.-....|++|+.+++++++.+...+    .|....   .|-++++-.+++ .++.+  +..
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~----lGa~~v---i~~~~~d~~~~v-~~~t~--g~g   97 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGAWQV---INYREEDLVERL-KEITG--GKK   97 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCSEE---EETTTSCHHHHH-HHHTT--TCC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh----cCCeEE---EECCCCCHHHHH-HHHhC--CCC
Confidence            48999999999999999999988899999999999988755443    343322   355554433332 22222  346


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.+.|.
T Consensus        98 ~d~v~d~~g~  107 (179)
T d1qora2          98 VRVVYDSVGR  107 (179)
T ss_dssp             EEEEEECSCG
T ss_pred             eEEEEeCccH
Confidence            9999999884

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=0.00025  Score=52.80  Aligned_cols=81  Identities=15%  Similarity=0.156  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|.+|+|.|+ +++|...+..+...|+ +|+++++++++++.. +++   |... ++..+-.+..+..+.+   ...++.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~---Ga~~-~~~~~~~~~~~~~~~~---~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI---GADL-VLQISKESPQEIARKV---EGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCSE-EEECSSCCHHHHHHHH---HHHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh---CCcc-cccccccccccccccc---cccCCC
Confidence            4789999987 9999999999999998 699999999887643 333   4333 2233334444444333   333445


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.+.|.
T Consensus        97 g~Dvvid~~G~  107 (171)
T d1pl8a2          97 KPEVTIECTGA  107 (171)
T ss_dssp             CCSEEEECSCC
T ss_pred             CceEEEeccCC
Confidence            69999999994

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.80  E-value=3.8e-05  Score=54.95  Aligned_cols=72  Identities=13%  Similarity=0.129  Sum_probs=57.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      .++|.|+ |.+|+.+++.|.++|+.|++++++++..+++.+++     ...++..|.+|++.++++--       ...|.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~i-------~~a~~   68 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGI-------EDADM   68 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTT-------TTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcCh-------hhhhh
Confidence            6889998 89999999999999999999999999887765542     45678899999987665411       35677


Q ss_pred             EEecc
Q 024551          100 LVNNA  104 (266)
Q Consensus       100 lv~~a  104 (266)
                      ++...
T Consensus        69 vv~~t   73 (132)
T d1lssa_          69 YIAVT   73 (132)
T ss_dssp             EEECC
T ss_pred             hcccC
Confidence            77643

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.68  E-value=0.00018  Score=54.21  Aligned_cols=81  Identities=16%  Similarity=0.166  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-C
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-D   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~   94 (266)
                      .|.+|+|+|+ +++|...+..+...|+ +|+++++++++++.. ++   .|....+ ...=.+..+.   .+++.+.. +
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~~vi-~~~~~~~~~~---~~~i~~~~~~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EE---IGADLTL-NRRETSVEER---RKAIMDITHG   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HH---TTCSEEE-ETTTSCHHHH---HHHHHHHTTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-cc---ccceEEE-eccccchHHH---HHHHHHhhCC
Confidence            5899999997 8999999998888998 799999999887533 33   3433322 2221222333   33333332 2


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      ..+|++|.+.|.
T Consensus        99 ~g~Dvvid~vG~  110 (182)
T d1vj0a2          99 RGADFILEATGD  110 (182)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCceEEeecCCc
Confidence            359999999985

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=3.8e-05  Score=49.47  Aligned_cols=43  Identities=21%  Similarity=0.268  Sum_probs=37.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      -++++++|+||++|+|.....-+...|++|+.+++++++.+.+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3688999999999999999998888999999999988776544

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.59  E-value=0.00012  Score=54.77  Aligned_cols=74  Identities=16%  Similarity=0.222  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++|+|+||++++|...+..+...|++|+.+++++++.+...    +.|....+   |..+      ..+++.+  +..
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~----~lGa~~~i---~~~~------~~~~~~~--~~g   91 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAEEAA---TYAE------VPERAKA--WGG   91 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCSEEE---EGGG------HHHHHHH--TTS
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc----ccccceee---ehhh------hhhhhhc--ccc
Confidence            6899999999999999999888889999999999887665433    33443222   3222      1122222  246


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|+++.+.|
T Consensus        92 ~D~v~d~~G  100 (171)
T d1iz0a2          92 LDLVLEVRG  100 (171)
T ss_dssp             EEEEEECSC
T ss_pred             ccccccccc
Confidence            999999876

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.54  E-value=0.00032  Score=52.10  Aligned_cols=45  Identities=16%  Similarity=0.249  Sum_probs=40.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l   62 (266)
                      ++|.|+|.|+ ||.+++++..|.+.|+ ++.++.|+.++.+.+++.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6889999988 8899999999999997 5999999999988887765

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.52  E-value=0.00026  Score=52.62  Aligned_cols=80  Identities=13%  Similarity=0.155  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|.|+++++|..++..+...|+ +|+++++++++++...+    .|....   .|-++++-.++..+..   .++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~----~Ga~~~---i~~~~~~~~~~~~~~~---~~~   96 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGADYV---INASMQDPLAEIRRIT---ESK   96 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCSEE---EETTTSCHHHHHHHHT---TTS
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH----cCCcee---eccCCcCHHHHHHHHh---hcc
Confidence            578999999999999999999888885 78889999877654433    343332   2334433333332222   234


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.++|.
T Consensus        97 ~~d~vid~~g~  107 (170)
T d1jvba2          97 GVDAVIDLNNS  107 (170)
T ss_dssp             CEEEEEESCCC
T ss_pred             cchhhhccccc
Confidence            69999999984

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.46  E-value=0.00016  Score=54.77  Aligned_cols=79  Identities=16%  Similarity=0.175  Sum_probs=51.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEE-EecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +++|||+||+||+|...++-....|++++ .+++++++...+++++   +....   .|.++++. .+.+.++.   +..
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~v---i~~~~~~~-~~~~~~~~---~~G  100 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAA---VNYKTGNV-AEQLREAC---PGG  100 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEE---EETTSSCH-HHHHHHHC---TTC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEE---eeccchhH-HHHHHHHh---ccC
Confidence            48999999999999998888777898755 4566766655555544   33332   24443332 22333332   245


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++.+.|.
T Consensus       101 vDvv~D~vGg  110 (187)
T d1vj1a2         101 VDVYFDNVGG  110 (187)
T ss_dssp             EEEEEESSCH
T ss_pred             ceEEEecCCc
Confidence            9999999983

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.45  E-value=0.0017  Score=46.92  Aligned_cols=112  Identities=10%  Similarity=0.064  Sum_probs=67.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhc---CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESK---GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +.+++.|.|+ |.+|..+|..|+.+|  ..|++++++++..+..+.++...   .........|   .++          
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~~----------   69 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YSD----------   69 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HHH----------
Confidence            3567888896 889999999999988  46999999998877666666542   2233333333   211          


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEe
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMS  154 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vs  154 (266)
                       . ..-|++|.++|.....      .+.-.+.+..|.    .+.+...+.+.+.. .+.++++|
T Consensus        70 -~-~~adivvitag~~~~~------g~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          70 -C-KDADLVVITAGAPQKP------GESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             -G-TTCSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             -h-ccccEEEEecccccCC------CCCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence             1 3479999999965321      112223344443    45555566666554 44555554

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.36  E-value=0.00012  Score=52.24  Aligned_cols=73  Identities=18%  Similarity=0.180  Sum_probs=54.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |.++|.|+ |.+|+.+++.|.++|+.|++++.+++..+++.    +.+  ...+..|.++++.++++--       ...|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~--~~~~~gd~~~~~~l~~a~i-------~~a~   66 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSLGI-------RNFE   66 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTC--SEEEECCTTCTTHHHHHTG-------GGCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhC--CcceeeecccchhhhccCC-------cccc
Confidence            56788877 78999999999999999999999998876553    233  3455689999887665311       3568


Q ss_pred             EEEeccc
Q 024551           99 ILVNNAA  105 (266)
Q Consensus        99 ~lv~~ag  105 (266)
                      .+|...+
T Consensus        67 ~vi~~~~   73 (134)
T d2hmva1          67 YVIVAIG   73 (134)
T ss_dssp             EEEECCC
T ss_pred             EEEEEcC
Confidence            7777655

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.31  E-value=0.00045  Score=51.63  Aligned_cols=78  Identities=13%  Similarity=0.131  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-C
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-D   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~   94 (266)
                      .|.+|+|.|+ +++|...+..+...|+ +|+.+++++++++.. +++   |... +  .|.++++-.    +++.+.. +
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~l---Ga~~-~--i~~~~~~~~----~~v~~~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFY---GATD-I--LNYKNGHIE----DQVMKLTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHH---TCSE-E--ECGGGSCHH----HHHHHHTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hhh---Cccc-c--ccccchhHH----HHHHHHhhc
Confidence            5889999987 8999999988888997 689999998876544 333   3222 2  233333222    2233322 1


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      ..+|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            349999999995

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.31  E-value=0.00048  Score=51.39  Aligned_cols=81  Identities=15%  Similarity=0.222  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++.+...+    .+....+...|-  ++.+.+......   ++
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~----~Ga~~~i~~~~~--~~~~~~~~~~~~---~~   97 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGATECVNPQDY--KKPIQEVLTEMS---NG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSEEECGGGC--SSCHHHHHHHHT---TS
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH----hCCeeEEecCCc--hhHHHHHHHHHh---cC
Confidence            6889999999 6899999999999985 78899999988654333    233322211222  122333333332   25


Q ss_pred             cccEEEeccccc
Q 024551           96 KLNILVNNAALV  107 (266)
Q Consensus        96 ~id~lv~~ag~~  107 (266)
                      .+|++|.+.|..
T Consensus        98 G~D~vid~~G~~  109 (176)
T d2jhfa2          98 GVDFSFEVIGRL  109 (176)
T ss_dssp             CBSEEEECSCCH
T ss_pred             CCCEEEecCCch
Confidence            699999999953

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.30  E-value=0.0014  Score=49.76  Aligned_cols=80  Identities=16%  Similarity=0.215  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|.+|+|.|+ +++|...+..+...|+ +|+++++++++++...    +.|....+   |-.+ +++.+.+.++..  +.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~----~~Ga~~~~---~~~~-~~~~~~i~~~t~--g~   93 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFEIAD---LSLD-TPLHEQIAALLG--EP   93 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCEEEE---TTSS-SCHHHHHHHHHS--SS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh----hccccEEE---eCCC-cCHHHHHHHHhC--CC
Confidence            5889999987 7999888877777787 6888899888765332    33433321   2222 233333333322  24


Q ss_pred             cccEEEeccccc
Q 024551           96 KLNILVNNAALV  107 (266)
Q Consensus        96 ~id~lv~~ag~~  107 (266)
                      .+|++|.+.|..
T Consensus        94 g~D~vid~vG~~  105 (195)
T d1kola2          94 EVDCAVDAVGFE  105 (195)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CcEEEEECcccc
Confidence            599999999854

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.001  Score=51.74  Aligned_cols=80  Identities=23%  Similarity=0.304  Sum_probs=54.2

Q ss_pred             cCCCCEEEEecC----------------CCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC
Q 024551           15 SLRGMTALVTGG----------------TRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF   78 (266)
Q Consensus        15 ~~~~k~vlItGa----------------s~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~   78 (266)
                      +++||.+|||+|                ||-.|.++|+++..+|++|.++.-....         .....+..  ..+.+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~--~~~~t   71 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKR--VDVMT   71 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEE--EECCS
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Cccccccc--ceehh
Confidence            689999999976                4689999999999999999876543321         01123333  24445


Q ss_pred             HHHHHHHHHHHHhhcCCcccEEEeccccccc
Q 024551           79 GDQREKLIETVSSVFDGKLNILVNNAALVVM  109 (266)
Q Consensus        79 ~~~i~~~~~~~~~~~~~~id~lv~~ag~~~~  109 (266)
                      .++....+..   .+ ...|++|++|.+...
T Consensus        72 ~~~m~~~~~~---~~-~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          72 ALEMEAAVNA---SV-QQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHHH---HG-GGCSEEEECCBCCSE
T ss_pred             hHHHHHHHHh---hh-ccceeEeeeechhhh
Confidence            5555444443   33 457999999998743

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.17  E-value=0.0011  Score=49.08  Aligned_cols=77  Identities=16%  Similarity=0.099  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++++|.|+ +++|...+..+...|++|+++++++++++.. +++   |....+...+-.+   .   .   .+.. +.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~l---Ga~~~i~~~~~~~---~---~---~~~~-~~   91 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKM---GADHYIATLEEGD---W---G---EKYF-DT   91 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHH---TCSEEEEGGGTSC---H---H---HHSC-SC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hcc---CCcEEeeccchHH---H---H---Hhhh-cc
Confidence            5899999987 8999998887778899999999998877543 333   4333221122111   1   1   1222 56


Q ss_pred             ccEEEecccccc
Q 024551           97 LNILVNNAALVV  108 (266)
Q Consensus        97 id~lv~~ag~~~  108 (266)
                      +|+++.+.+...
T Consensus        92 ~d~vi~~~~~~~  103 (168)
T d1piwa2          92 FDLIVVCASSLT  103 (168)
T ss_dssp             EEEEEECCSCST
T ss_pred             cceEEEEecCCc
Confidence            899999887543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.14  E-value=0.0034  Score=45.97  Aligned_cols=41  Identities=20%  Similarity=0.243  Sum_probs=35.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      .|++++|.|+ +++|...+..+...|++|+.+++++++++..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            5889999886 9999999988888999999999999887543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.14  E-value=0.0025  Score=47.50  Aligned_cols=80  Identities=11%  Similarity=0.098  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++++ +++++   |....+   |-++.+...+.+.+...  ++
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~-~Ak~~---GA~~~i---n~~~~~~~~~~~~~~~~--g~   98 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFE-KAMAV---GATECI---SPKDSTKPISEVLSEMT--GN   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHH---TCSEEE---CGGGCSSCHHHHHHHHH--TS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHH-HHHhc---CCcEEE---CccccchHHHHHHHHhc--cc
Confidence            5889999987 8999999999999995 6999999999876 33333   433333   22222221122222222  34


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.+.|.
T Consensus        99 G~d~vi~~~g~  109 (176)
T d1d1ta2          99 NVGYTFEVIGH  109 (176)
T ss_dssp             CCCEEEECSCC
T ss_pred             cceEEEEeCCc
Confidence            69999999985

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.12  E-value=0.00043  Score=51.87  Aligned_cols=49  Identities=16%  Similarity=0.192  Sum_probs=43.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES   64 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~   64 (266)
                      .+++||.|+|.|+ ||.+++++.+|.+.| +|.++.|+.++.+++++.+..
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            4589999999987 678999999998777 899999999999999988764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.11  E-value=0.00096  Score=49.67  Aligned_cols=78  Identities=13%  Similarity=0.190  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEE-EecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVH-TCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|.+++|.|+ +++|...+..+...|++++ ++++++++++.. +++   |.. +++  |.++++ .   .+++++..++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga~-~~i--~~~~~~-~---~~~i~~~t~g   95 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GAT-HVI--NSKTQD-P---VAAIKEITDG   95 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCS-EEE--ETTTSC-H---HHHHHHHTTS
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CCe-EEE--eCCCcC-H---HHHHHHHcCC
Confidence            5889999998 8999999988888898755 567777665543 333   322 222  444432 2   2333333335


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.+.|.
T Consensus        96 g~D~vid~~G~  106 (174)
T d1f8fa2          96 GVNFALESTGS  106 (174)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEEcCCc
Confidence            79999999994

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.09  E-value=0.0025  Score=47.41  Aligned_cols=85  Identities=14%  Similarity=0.194  Sum_probs=61.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH---------------HHhcCCeeEEEeccCCCHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE---------------WESKGFKVTGSVCDLSFGDQRE   83 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~---------------l~~~~~~~~~~~~D~~~~~~i~   83 (266)
                      +++-|.|- +-+|.++|+.|+++|++|++.+|++++.+++.+.               +.+.-.....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            45677777 7899999999999999999999999998887653               1111223344555677778888


Q ss_pred             HHHHHHHhhcCCcccEEEeccc
Q 024551           84 KLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        84 ~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      ...+.+.... .+=+++|.+.-
T Consensus        82 ~v~~~l~~~~-~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLL-DIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHC-CTTCEEEECSC
T ss_pred             HHHHHHHhcc-ccCcEEEecCc
Confidence            8888877765 33456666544

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.06  E-value=0.00026  Score=52.68  Aligned_cols=77  Identities=18%  Similarity=0.154  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHH-HhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETV-SSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~-~~~~~~   95 (266)
                      ++++|||+||+||+|.+.+.-....|++|+.+++++++.+.+.+    .+....+   |   .+   ....+. ....++
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~----lGad~vi---~---~~---~~~~~~~~~~~~~   89 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGASEVI---S---RE---DVYDGTLKALSKQ   89 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCSEEE---E---HH---HHCSSCCCSSCCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh----hcccceE---e---cc---chhchhhhcccCC
Confidence            57789999999999999887777789999999998877654433    3433322   1   11   111111 122235


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|+++.+.|.
T Consensus        90 gvd~vid~vgg  100 (167)
T d1tt7a2          90 QWQGAVDPVGG  100 (167)
T ss_dssp             CEEEEEESCCT
T ss_pred             CceEEEecCcH
Confidence            79999999885

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.04  E-value=0.0012  Score=47.86  Aligned_cols=84  Identities=14%  Similarity=0.094  Sum_probs=56.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++.+=|++.|.||.|.+|.++|+.|.++|++|.+.+|++....+...    ......+...   ....+...+.++....
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~~~~~v~~~~---~~~~~~~v~~~~~~~~   77 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----ANADVVIVSV---PINLTLETIERLKPYL   77 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----TTCSEEEECS---CGGGHHHHHHHHGGGC
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----hhcccccccc---chhhheeeeecccccc
Confidence            44556899999999999999999999999999999998765443221    1233433333   3445666777776654


Q ss_pred             CCcccEEEeccc
Q 024551           94 DGKLNILVNNAA  105 (266)
Q Consensus        94 ~~~id~lv~~ag  105 (266)
                       .+=.+++..+.
T Consensus        78 -~~~~iiiD~~S   88 (152)
T d2pv7a2          78 -TENMLLADLTS   88 (152)
T ss_dssp             -CTTSEEEECCS
T ss_pred             -cCCceEEEecc
Confidence             22234444443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.04  E-value=0.0008  Score=49.98  Aligned_cols=79  Identities=19%  Similarity=0.282  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCC-CHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLS-FGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~~   94 (266)
                      .|.+|+|.|+ +|+|...+..+...|++ |+.+++++++++ +++++   |....+   |.. +.+.+.+.+....   +
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l---Ga~~~i---~~~~~~~~~~~~~~~~~---~   96 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF---GATECI---NPQDFSKPIQEVLIEMT---D   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH---TCSEEE---CGGGCSSCHHHHHHHHT---T
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh---CCcEEE---eCCchhhHHHHHHHHHc---C
Confidence            5889999998 58999999888889965 666777777754 44444   333222   222 1223333333332   3


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.+.|.
T Consensus        97 ~g~D~vid~~G~  108 (176)
T d2fzwa2          97 GGVDYSFECIGN  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEeeecCCC
Confidence            569999999984

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.03  E-value=0.0023  Score=46.33  Aligned_cols=114  Identities=15%  Similarity=0.082  Sum_probs=71.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      -.++++.|+|+ |.+|..+|..|+.+|.  .+++++++++.++..+.++.+.    ...+.+...|   .++        
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~~--------   71 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YDD--------   71 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GGG--------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HHH--------
Confidence            45678888997 9999999999999884  5999999999887777777643    1223332222   211        


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEec
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSS  155 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss  155 (266)
                         . ..-|++|.++|......  ....+    .+..|    ..+.+.+.+.+.+. ..+.+++++.
T Consensus        72 ---l-~daDvvvitag~~~~~~--~~R~d----l~~~N----~~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          72 ---C-RDADLVVICAGANQKPG--ETRLD----LVDKN----IAIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             ---T-TTCSEEEECCSCCCCTT--TCSGG----GHHHH----HHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             ---h-ccceeEEEecccccccC--cchhH----HHHHH----HHHHHHHHHHHHhhCCCceEEEecC
Confidence               1 34799999999753211  11111    22333    34455556665554 3566666654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.00046  Score=51.79  Aligned_cols=42  Identities=21%  Similarity=0.293  Sum_probs=36.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      +++++||+||+||+|...+.-....|++|+.+++++++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            456899999999999998888888999999999998876433

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.01  E-value=0.0017  Score=48.29  Aligned_cols=79  Identities=15%  Similarity=0.157  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcCCeeEEEeccCCC-HHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKGFKVTGSVCDLSF-GDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   94 (266)
                      .|.+|+|.|+ ++||...+..+...|++ |+++++++++++ +++++   |.... +  |... ++..........   +
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~---Ga~~~-i--~~~~~~~~~~~~~~~~~---~   96 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKAL---GATDC-L--NPRELDKPVQDVITELT---A   96 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT---TCSEE-E--CGGGCSSCHHHHHHHHH---T
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHh---CCCcc-c--CCccchhhhhhhHhhhh---c
Confidence            5789999975 99999999999999985 778888888753 33333   33322 2  2211 122333333322   3


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.++|.
T Consensus        97 ~G~d~vie~~G~  108 (174)
T d1e3ia2          97 GGVDYSLDCAGT  108 (174)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCCcEEEEeccc
Confidence            569999999994

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.97  E-value=0.00034  Score=46.58  Aligned_cols=38  Identities=13%  Similarity=0.171  Sum_probs=33.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      +++||+++|.|. +..|.++|+.|.++|++|.+.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            689999999998 56799999999999999999988554

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.97  E-value=0.0011  Score=45.69  Aligned_cols=39  Identities=21%  Similarity=0.206  Sum_probs=34.1

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      ++++||+++|.|++. +|..-++.|.+.|++|++++....
T Consensus         8 l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence            369999999999955 999999999999999998877554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.96  E-value=0.023  Score=41.26  Aligned_cols=118  Identities=8%  Similarity=0.035  Sum_probs=74.1

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      +..+..+.+.|.|+ |.+|.++|..|+.+|.  .+++++++++..+..+.++...    +.......   .|.++     
T Consensus        15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~~-----   85 (160)
T d1i0za1          15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYSV-----   85 (160)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGGG-----
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchhh-----
Confidence            34455678888896 9999999999999995  5999999998887777766542    11221111   22222     


Q ss_pred             HHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecC
Q 024551           87 ETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSV  156 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~  156 (266)
                            . ..-|++|..||.....   ..+..   +.++.    ...+.+.+.+.+.+.. .+-++++|..
T Consensus        86 ------~-~~adiVVitAg~~~~~---g~tR~---~l~~~----N~~i~~~i~~~i~~~~p~aiiivvtNP  139 (160)
T d1i0za1          86 ------T-ANSKIVVVTAGVRQQE---GESRL---NLVQR----NVNVFKFIIPQIVKYSPDCIIIVVSNP  139 (160)
T ss_dssp             ------G-TTCSEEEECCSCCCCT---TCCGG---GGHHH----HHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             ------c-ccccEEEEecCCcccc---CcchH---HHHHH----HHHHHHHHHHHHHhcCCCcEEEEeCCc
Confidence                  1 3479999999975321   11211   22333    3446666677766644 5667766643

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.0013  Score=49.91  Aligned_cols=44  Identities=20%  Similarity=0.280  Sum_probs=39.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE   63 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~   63 (266)
                      |++.|.|+ |-+|..+|..++..|+.|++.+++++.++...+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            78899999 779999999999999999999999998877766654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.86  E-value=0.0044  Score=45.34  Aligned_cols=81  Identities=17%  Similarity=0.087  Sum_probs=53.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHH--------hc--CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE--------SK--GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~--------~~--~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++.|.|+ |-+|.++|+.|.++|++|++++|+++..++..+.-.        +.  ...+.++.   ...+.++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila---vp~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC---TPIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC---SCHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc---CcHhhhhhhhhhh
Confidence            4667766 889999999999999999999999987776554210        00  11222222   2356788888888


Q ss_pred             HhhcCCcccEEEeccc
Q 024551           90 SSVFDGKLNILVNNAA  105 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag  105 (266)
                      .+.. .+=.++++..+
T Consensus        78 ~~~l-~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHL-SPTAIVTDVAS   92 (165)
T ss_dssp             GGGS-CTTCEEEECCS
T ss_pred             hhhc-ccccceeeccc
Confidence            7765 33345555443

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.0028  Score=46.65  Aligned_cols=75  Identities=16%  Similarity=0.177  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|++|+|.|+ |++|...+..+...|++++++++++++.+ .++++   |....   .|..+++...       ... +.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l---Gad~~---i~~~~~~~~~-------~~~-~~   93 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL---GADEV---VNSRNADEMA-------AHL-KS   93 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH---TCSEE---EETTCHHHHH-------TTT-TC
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc---CCcEE---EECchhhHHH-------Hhc-CC
Confidence            5899999986 89999988888889999999999888764 33444   43322   3555544321       111 46


Q ss_pred             ccEEEeccccc
Q 024551           97 LNILVNNAALV  107 (266)
Q Consensus        97 id~lv~~ag~~  107 (266)
                      +|++|.+.|..
T Consensus        94 ~D~vid~~g~~  104 (168)
T d1uufa2          94 FDFILNTVAAP  104 (168)
T ss_dssp             EEEEEECCSSC
T ss_pred             Cceeeeeeecc
Confidence            99999999853

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.80  E-value=0.0041  Score=46.13  Aligned_cols=79  Identities=20%  Similarity=0.210  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHH-HHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGD-QREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~   94 (266)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++++...+    .|....+   |.++.+ .+.+.....   .+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~----lGa~~~i---~~~~~d~~~~~~~~~~---~~   95 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGATECL---NPKDYDKPIYEVICEK---TN   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCSEEE---CGGGCSSCHHHHHHHH---TT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH----cCCcEEE---cCCCchhHHHHHHHHh---cC
Confidence            5889999986 8999999999999996 58889999988754433    3433322   322222 122222222   23


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|++|.+.|.
T Consensus        96 ~G~d~vid~~g~  107 (174)
T d1p0fa2          96 GGVDYAVECAGR  107 (174)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEEcCCC
Confidence            569999999985

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.79  E-value=0.011  Score=42.30  Aligned_cols=115  Identities=10%  Similarity=0.123  Sum_probs=68.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           19 MTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      |++.|+|+ |.+|.++|..|+.+|  ..++++++++++++....++.+.    ........   .|.++           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCHHH-----------
Confidence            67778895 899999999999988  36999999999887666666543    12222222   23222           


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                      . ..-|++|..||.......  -+.++-.+.++.|    ..+.+...+.+.+.. .+.++++|.
T Consensus        67 l-~~adiVVitaG~~~~~~~--~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          67 L-ADADVVISTLGNIKLQQD--NPTGDRFAELKFT----SSMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             G-TTCSEEEECCSCGGGTC---------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             h-ccccEEEEeccccccccc--cCCccHHHHHHHH----HHHHHHHHHHHhhcCCCeEEEEecC
Confidence            1 247999999996532110  0111111223333    355566677666654 456665554

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.76  E-value=0.017  Score=42.00  Aligned_cols=114  Identities=11%  Similarity=0.087  Sum_probs=69.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC----CeeEEEeccCCCHHHHHHHHHHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG----FKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      ++...+.|+|+ |.+|..+|..|+.+|.  .+++++++++.++..+.++....    ........|   .++        
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~~--------   84 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YNV--------   84 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GGG--------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hhh--------
Confidence            44456777796 9999999999999984  59999999988877777776532    122222222   221        


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-CCCeEEEEec
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-GNASIVFMSS  155 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~vss  155 (266)
                         . ..-|++|..||.......   +..   +.++.    ...+.+...+.+.+. ..+.+++++.
T Consensus        85 ---~-~~adivvitag~~~~~~~---~R~---dll~~----N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          85 ---S-ANSKLVIITAGARMVSGQ---TRL---DLLQR----NVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             ---G-TTEEEEEECCSCCCCTTT---CSS---CTTHH----HHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             ---h-ccccEEEEecccccCCCC---CHH---HHHHH----HHHHHHHHHHHHhccCCCeEEEEeCC
Confidence               1 357999999997532211   111   11222    334455566655544 4567776664

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.74  E-value=0.0045  Score=45.65  Aligned_cols=78  Identities=15%  Similarity=0.160  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++++|.|+ +++|...+..+...|+ .|+.+++++++++...+    .+... ++  |-+ .+.++...+..   .+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~ga~~-~i--~~~-~~~~~~~~~~~---~~~   99 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGADH-VV--DAR-RDPVKQVMELT---RGR   99 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTCSE-EE--ETT-SCHHHHHHHHT---TTC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----cccce-ee--cCc-ccHHHHHHHhh---CCC
Confidence            4789999986 9999998888888886 56777888876553332    33332 22  222 23333333221   124


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|++|.++|.
T Consensus       100 g~d~vid~~g~  110 (172)
T d1h2ba2         100 GVNVAMDFVGS  110 (172)
T ss_dssp             CEEEEEESSCC
T ss_pred             CceEEEEecCc
Confidence            59999999994

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.73  E-value=0.0038  Score=45.11  Aligned_cols=76  Identities=9%  Similarity=-0.024  Sum_probs=58.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccE
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNI   99 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~   99 (266)
                      .++|.|. +.+|+.+++.|.++|.+|+++..+++...+..+++..  ..+.++..|.+|++.++++--       .+.|.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~--~~~~vi~Gd~~d~~~L~~a~i-------~~a~~   74 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAGI-------DRCRA   74 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHTT-------TTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc--CCcEEEEccCcchHHHHHhcc-------ccCCE
Confidence            4677777 6899999999999999999999998877666666544  357788999999877655322       45788


Q ss_pred             EEeccc
Q 024551          100 LVNNAA  105 (266)
Q Consensus       100 lv~~ag  105 (266)
                      +|...+
T Consensus        75 vi~~~~   80 (153)
T d1id1a_          75 ILALSD   80 (153)
T ss_dssp             EEECSS
T ss_pred             EEEccc
Confidence            877654

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.71  E-value=0.0081  Score=44.55  Aligned_cols=115  Identities=13%  Similarity=0.082  Sum_probs=66.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCC-------eEEEecCCh--hHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGA-------SVHTCGRDQ--NMINERIQEWESKGF-KVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~   87 (266)
                      --.|.||||+|.||.+++..|+..+.       .+.+.+.++  +.++...-++.+... ....+..- ++..       
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~~-------   95 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDPY-------   95 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCHH-------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccch-------
Confidence            44799999999999999999998542       355666544  445555555555432 11111111 2221       


Q ss_pred             HHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-C-CCeEEEEe
Q 024551           88 TVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-G-NASIVFMS  154 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~-~g~iv~vs  154 (266)
                         +.+ ...|++|..+|....   ...+.+   +.++.|    ..+.+...+.+.+. + ...|+.++
T Consensus        96 ---~~~-~~aDvVvi~ag~~rk---pg~tR~---Dll~~N----~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          96 ---EVF-EDVDWALLIGAKPRG---PGMERA---ALLDIN----GQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             ---HHT-TTCSEEEECCCCCCC---TTCCHH---HHHHHH----HHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ---hhc-cCCceEEEeeccCCC---CCCcHH---HHHHHH----HHHHHHHHHHHHhhCCCCcEEEEec
Confidence               112 358999999997532   122333   345555    44556666666664 3 34555554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.67  E-value=0.012  Score=43.01  Aligned_cols=98  Identities=12%  Similarity=0.093  Sum_probs=69.4

Q ss_pred             CCccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHH
Q 024551            6 EPVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKL   85 (266)
Q Consensus         6 ~~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~   85 (266)
                      ..+++......+.-+|+|.|+ +-.|...++.....|++|.+++.+.++++++.+....   .+.   .-.++++.+++.
T Consensus        20 ~G~Llgg~~gv~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~---~~~~~~~~l~~~   92 (168)
T d1pjca1          20 RGVLLGGVPGVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETA   92 (168)
T ss_dssp             CCCCTTCBTTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHH
T ss_pred             cEEEecCCCCCCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---cce---eehhhhhhHHHh
Confidence            346666666778889999998 5678888999999999999999999999887776643   222   234555555544


Q ss_pred             HHHHHhhcCCcccEEEeccccccccCCCCCCHH
Q 024551           86 IETVSSVFDGKLNILVNNAALVVMKRATEYTLE  118 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~  118 (266)
                      +.        .-|++|.++-+.......-++.+
T Consensus        93 ~~--------~aDivI~aalipG~~aP~lIt~~  117 (168)
T d1pjca1          93 VA--------EADLLIGAVLVPGRRAPILVPAS  117 (168)
T ss_dssp             HH--------TCSEEEECCCCTTSSCCCCBCHH
T ss_pred             hc--------cCcEEEEeeecCCcccCeeecHH
Confidence            43        46999999887644333333444

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.67  E-value=0.0038  Score=44.83  Aligned_cols=115  Identities=14%  Similarity=0.041  Sum_probs=64.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      .+.|+||+|.+|.++|..|+.+|.  .+++++.++.+.+  ..++..... ......-+ ...+..+.+        ..-
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~-~~~~~~~~-~~~~~~~~~--------~~a   69 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIET-RATVKGYL-GPEQLPDCL--------KGC   69 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSS-SCEEEEEE-SGGGHHHHH--------TTC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhh-hcCCCeEE-cCCChHHHh--------CCC
Confidence            578999999999999999999984  3888998765433  233432211 11111111 122222211        247


Q ss_pred             cEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecC
Q 024551           98 NILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSV  156 (266)
Q Consensus        98 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~  156 (266)
                      |++|..+|.....   ..+..   +.++.|..-    .+...+.+.+.. .+.|+++|..
T Consensus        70 DivVitag~~~~~---g~sR~---~ll~~N~~i----~~~i~~~i~~~~p~~iiivvtNP  119 (144)
T d1mlda1          70 DVVVIPAGVPRKP---GMTRD---DLFNTNATI----VATLTAACAQHCPDAMICIISNP  119 (144)
T ss_dssp             SEEEECCSCCCCT---TCCGG---GGHHHHHHH----HHHHHHHHHHHCTTSEEEECSSC
T ss_pred             CEEEECCCcCCCC---CCCcc---hHHHHHHHH----HHHHHHHHHhcCCCeEEEEecCc
Confidence            9999999974321   11211   235555544    444555555544 5667766643

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.64  E-value=0.013  Score=41.77  Aligned_cols=112  Identities=11%  Similarity=0.069  Sum_probs=65.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++.|+|+ |.+|.++|..|+.++ +.+++++.+++..+..+.++...    .....+..+  .|.++           .
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~-----------~   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHH-----------h
Confidence            46667786 999999999999888 47999999988776666665432    112222111  11111           1


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                       ..-|++|.+||.....      .+.-.+.+..|.    .+.+...+.+.+.. .+.++++|.
T Consensus        68 -~~advvvitag~~~~~------~~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          68 -ANSDVIVVTSGAPRKP------GMSREDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             -TTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             -cCCCEEEEeeeccCCc------CcchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence             2479999999975321      111223344443    46667777776644 555555543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.64  E-value=0.0022  Score=47.67  Aligned_cols=42  Identities=31%  Similarity=0.155  Sum_probs=37.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHH
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQ   60 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~   60 (266)
                      .|++.|.|+ |.+|.++|..|+++|++|.+++|+++..+.+.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            478999999 889999999999999999999999988766554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.59  E-value=0.0097  Score=42.66  Aligned_cols=113  Identities=10%  Similarity=0.061  Sum_probs=65.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CeEEEecCChh--HHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           20 TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQN--MINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~--~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .+.|+||+|.+|.++|..|+.+|  -.+++++++++  +++-.+.++...    .........--.|.+.          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~----------   71 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRI----------   71 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHH----------
Confidence            58899999999999999999999  36999998764  344444555431    1222221111112211          


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEe
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMS  154 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vs  154 (266)
                       . ..-|++|.+||....   ...+..   +.++.|..    +.+...+.+.+.....|+.+|
T Consensus        72 -l-~~aDvVVitAG~~~~---~g~sR~---dl~~~Na~----iv~~i~~~i~~~~~~~iivVt  122 (145)
T d1hyea1          72 -I-DESDVVIITSGVPRK---EGMSRM---DLAKTNAK----IVGKYAKKIAEICDTKIFVIT  122 (145)
T ss_dssp             -G-TTCSEEEECCSCCCC---TTCCHH---HHHHHHHH----HHHHHHHHHHHHCCCEEEECS
T ss_pred             -h-ccceEEEEecccccC---CCCChh---hhhhhhHH----HHHHHHHHHhccCCCeEEEEc
Confidence             1 347999999997532   122333   23444544    445555555555444555443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.56  E-value=0.0043  Score=44.46  Aligned_cols=110  Identities=9%  Similarity=-0.052  Sum_probs=62.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+.|.|+ |.+|..++..++.+|.  .+++++++++.++..+.++.+..   .......   .+.+           .. 
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~---~~~~-----------~~-   66 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GDYS-----------DV-   66 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GG-
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEee---CcHH-----------Hh-
Confidence            4455587 9999999999999984  59999999987766666665431   1222111   1111           12 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                      ..-|++|..||.....   ..+   -.+.++.|.    .+.+.+.+.+.+.. .+.++++|.
T Consensus        67 ~~adivvitag~~~~~---~~~---r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          67 KDCDVIVVTAGANRKP---GET---RLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             TTCSEEEECCCC---------C---HHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred             CCCceEEEecccccCc---Ccc---hhHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence            3479999999965321   112   223344444    45556666666643 566666654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.56  E-value=0.019  Score=41.50  Aligned_cols=118  Identities=13%  Similarity=0.073  Sum_probs=68.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +.+++.|.|+ |.+|..+|..++.++ .++++++.+++.++..+.++...    +...... . -++.+   ..+     
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~-~~~~~---~~~-----   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-A-EYSYE---AAL-----   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-E-ECSHH---HHH-----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-c-cCchh---hhh-----
Confidence            4567788897 999999999998888 47999999998877776666542    1111111 1 11111   111     


Q ss_pred             hcCCcccEEEecccccc-ccCC-CCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           92 VFDGKLNILVNNAALVV-MKRA-TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~-~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                         ..-|++|..+|... ++.. .+.+..+   .+..|    ..+++...+.+.+.. .+.++++|.
T Consensus        75 ---~~adiVvitag~~~~~g~~~~~~tR~~---l~~~n----~~iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          75 ---TGADCVIVTAGLTKVPGKPDSEWSRND---LLPFN----SKIIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             ---TTCSEEEECCSCSSCTTCCGGGCCGGG---GHHHH----HHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ---cCCCeEEEecccccCCCCCCcccchhh---hhhhh----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence               24799999999753 2211 1112111   22233    344555566555544 556666654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.56  E-value=0.0058  Score=44.62  Aligned_cols=41  Identities=17%  Similarity=0.190  Sum_probs=35.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      .|++++|.|+ |++|...+..+...|++|+++++++++++..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            5789999875 8899998888888999999999999887543

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.47  E-value=0.017  Score=43.73  Aligned_cols=78  Identities=17%  Similarity=0.157  Sum_probs=61.2

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .-+++|++||=.|+++|.   ++.+++.+|+ +|+.++.++..++...+.+...+.+..++..|+.+.            
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC------------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh------------
Confidence            356899999988877762   3445567785 799999999999888888877788888888886432            


Q ss_pred             hcCCcccEEEeccccc
Q 024551           92 VFDGKLNILVNNAALV  107 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~  107 (266)
                        .+++|++|.|+...
T Consensus       107 --~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 --NSRVDIVIMNPPFG  120 (201)
T ss_dssp             --CCCCSEEEECCCCS
T ss_pred             --CCcCcEEEEcCccc
Confidence              36899999999864

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.46  E-value=0.0021  Score=48.34  Aligned_cols=84  Identities=13%  Similarity=0.104  Sum_probs=54.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc----C
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF----D   94 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~----~   94 (266)
                      |++.|.|+ |-+|..+|..|+.+|++|++.+++++.+++..+.+...-.+  .+.-....+...+...+.+.-..    -
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~   81 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVG--RVDKGRMTPAKMAEVLNGIRPTLSYGDF   81 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHH--HHTTTSSCHHHHHHHHHHEEEESSSTTG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHh--hhcccccchhhhhhhhceeecccccccc
Confidence            56888998 77999999999999999999999999887766655432000  00112334555555555443211    0


Q ss_pred             CcccEEEeccc
Q 024551           95 GKLNILVNNAA  105 (266)
Q Consensus        95 ~~id~lv~~ag  105 (266)
                      ...|.+|-+..
T Consensus        82 ~~adlViEav~   92 (186)
T d1wdka3          82 GNVDLVVEAVV   92 (186)
T ss_dssp             GGCSEEEECCC
T ss_pred             cccceeeeeec
Confidence            34577776554

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.46  E-value=0.0035  Score=47.72  Aligned_cols=44  Identities=27%  Similarity=0.369  Sum_probs=38.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      .+++||+++|-| .|.+|.++|+.|.+.|++|++.+.+.+.+...
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            369999999998 57799999999999999999999998776543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.44  E-value=0.006  Score=44.49  Aligned_cols=83  Identities=12%  Similarity=0.088  Sum_probs=53.7

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHH-------hcCCeeEEEeccCCCHHHHHHHH---HHHH
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE-------SKGFKVTGSVCDLSFGDQREKLI---ETVS   90 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~-------~~~~~~~~~~~D~~~~~~i~~~~---~~~~   90 (266)
                      +-|.|. +-+|..+|+.|+++|++|++.+|++++.+++.+.-.       +....+.++..-+.+.+.+++++   +.+.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            556655 789999999999999999999999998877654211       00112334455667777777776   2333


Q ss_pred             hhcCCcccEEEeccc
Q 024551           91 SVFDGKLNILVNNAA  105 (266)
Q Consensus        91 ~~~~~~id~lv~~ag  105 (266)
                      ... .+=+++|.+.-
T Consensus        82 ~~~-~~g~iiid~sT   95 (161)
T d1vpda2          82 EGA-KPGTVLIDMSS   95 (161)
T ss_dssp             HHC-CTTCEEEECSC
T ss_pred             hcc-CCCCEEEECCC
Confidence            333 23345555443

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.37  E-value=0.005  Score=44.38  Aligned_cols=37  Identities=22%  Similarity=0.365  Sum_probs=32.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD   51 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~   51 (266)
                      +.++||++||.|| |.+|..-++.|.+.|++|.+++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4589999999999 559999999999999999988653

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.37  E-value=0.018  Score=41.60  Aligned_cols=113  Identities=12%  Similarity=0.094  Sum_probs=66.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC---------eEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA---------SVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~---------~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      .|.|+||+|.+|..++..|+..+.         .++...++.+.++....++.... .....+...-.+.+.        
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   77 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA--------   77 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh--------
Confidence            799999999999999999998763         23344566666666666665543 223332332222211        


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-C-CCeEEEEe
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-G-NASIVFMS  154 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~-~g~iv~vs  154 (266)
                         + ...|++|..+|....   ...+.+++   ++.|    ..+.+.+.+.+.+. . .+.|+.+|
T Consensus        78 ---~-~~advViitaG~~~~---pg~~r~dl---~~~N----~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          78 ---F-KDADYALLVGAAPRK---AGMERRDL---LQVN----GKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             ---T-TTCSEEEECCCCCCC---TTCCHHHH---HHHH----HHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ---c-ccccEEEeecCcCCC---CCCcHHHH---HHHH----HHHHHHHHHHHHHhCCCCcEEEEec
Confidence               1 358999999997532   22344443   3444    34555556666653 2 34555554

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.34  E-value=0.007  Score=47.13  Aligned_cols=76  Identities=18%  Similarity=0.153  Sum_probs=61.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ..+++++|=.||+.|.   ++..|+++|.+|+.++.+++.++...+.....+.++.++..|+.+..            ..
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~------------~~   99 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN------------IN   99 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC------------CS
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc------------cc
Confidence            3567899999998885   78889999999999999999998887777777778999999886542            12


Q ss_pred             CcccEEEeccc
Q 024551           95 GKLNILVNNAA  105 (266)
Q Consensus        95 ~~id~lv~~ag  105 (266)
                      +++|+++...+
T Consensus       100 ~~fD~i~~~~~  110 (246)
T d1y8ca_         100 RKFDLITCCLD  110 (246)
T ss_dssp             CCEEEEEECTT
T ss_pred             ccccccceeee
Confidence            57998886544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.32  E-value=0.038  Score=40.13  Aligned_cols=84  Identities=12%  Similarity=0.095  Sum_probs=53.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhc----------CCeeEEEeccCCCHHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESK----------GFKVTGSVCDLSFGDQREKLI   86 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~D~~~~~~i~~~~   86 (266)
                      |+++|.|+ |-+|.++|+.|.+.|+  +|+.++++++.++...+.-.-.          ......+.+ ..-++.+..++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhh
Confidence            46888886 8999999999999995  6888999998877655531100          001111111 12356677788


Q ss_pred             HHHHhhcCCcccEEEeccc
Q 024551           87 ETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        87 ~~~~~~~~~~id~lv~~ag  105 (266)
                      +++.+.. .+=.+++...+
T Consensus        80 ~~l~~~~-~~~~ii~d~~s   97 (171)
T d2g5ca2          80 KKLSYIL-SEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHS-CTTCEEEECCS
T ss_pred             hhhhccc-ccccccccccc
Confidence            8877765 33345555444

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.30  E-value=0.024  Score=40.48  Aligned_cols=113  Identities=12%  Similarity=0.084  Sum_probs=65.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-C--CeEEEecCChhHHHHHHHHHHhcCC--eeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           20 TALVTGGTRGIGYAIVEELARF-G--ASVHTCGRDQNMINERIQEWESKGF--KVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~-G--~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+.|+|++|.+|.++|..|+.+ +  ..+++.+.++ ..+..+-++.....  .... ...-.+.+.+            
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~~------------   67 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG-FSGEDATPAL------------   67 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE-ECSSCCHHHH------------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE-EEcCCCcccc------------
Confidence            5789999999999999988643 4  6699999865 34444445554322  2221 1222233221            


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEecC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSSV  156 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss~  156 (266)
                      ..-|++|..+|......   .+..   +.+..|.    .+.+...+.+.+.. ++.++++|..
T Consensus        68 ~~aDvvvitaG~~~k~g---~~R~---dl~~~N~----~i~~~v~~~i~~~~p~aivivvtNP  120 (145)
T d2cmda1          68 EGADVVLISAGVRRKPG---MDRS---DLFNVNA----GIVKNLVQQVAKTCPKACIGIITNP  120 (145)
T ss_dssp             TTCSEEEECCSCCCCTT---CCGG---GGHHHHH----HHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred             CCCCEEEECCCccCCCC---cchh---hHHHHHH----HHHHHHHHHHHhhCCCcEEEEccCC
Confidence            23699999999753211   1222   2344453    44555556665543 5666666653

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=96.24  E-value=0.18  Score=40.58  Aligned_cols=151  Identities=12%  Similarity=0.112  Sum_probs=85.6

Q ss_pred             CCCEEEEecCCC-chHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           17 RGMTALVTGGTR-GIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        17 ~~k~vlItGas~-giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +||+||=..+.. +++    .+.+..|+ .|+.++.++..++...+.+..++   .++.+++.|+.      ..+++..+
T Consensus       144 ~g~~VLdlf~~~G~~s----l~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFS----VAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHH----HHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHH----HHHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            588998666554 443    34556787 49999999999888888776654   35788888863      33444444


Q ss_pred             hcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchhhhhh
Q 024551           92 VFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSAYAAS  171 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~y~~s  171 (266)
                      .. .++|++|..+......+-...+..          .....+.+.++++++.  +|.+++ +|.+...           
T Consensus       214 ~~-~~fD~Ii~DPP~f~~~~~~~~~~~----------~~~~~L~~~a~~ll~p--gG~l~~-~scs~~~-----------  268 (317)
T d2b78a2         214 HH-LTYDIIIIDPPSFARNKKEVFSVS----------KDYHKLIRQGLEILSE--NGLIIA-STNAANM-----------  268 (317)
T ss_dssp             TT-CCEEEEEECCCCC-----CCCCHH----------HHHHHHHHHHHHTEEE--EEEEEE-EECCTTS-----------
T ss_pred             hc-CCCCEEEEcChhhccchhHHHHHH----------HHHHHHHHHHHHHcCC--CCEEEE-EeCCccC-----------
Confidence            43 579999999875533221111111          1223355666666654  345554 4433221           


Q ss_pred             HHHHHHHHHHHHHHhccCCcEEEEEecCcccCC
Q 024551          172 KGAINQLTKNLACEWATDSIRVNAVSPWAVNTQ  204 (266)
Q Consensus       172 K~al~~~~~~~a~el~~~gi~v~~i~PG~v~t~  204 (266)
                        ..+.|.+.+...+...+.++..+..-+.|-|
T Consensus       269 --~~~~f~~~v~~a~~~~~~~~~~~~~~~~DfP  299 (317)
T d2b78a2         269 --TVSQFKKQIEKGFGKQKHTYLDLQQLPSDFA  299 (317)
T ss_dssp             --CHHHHHHHHHHHHTTCCCEEEEEECCCTTSC
T ss_pred             --CHHHHHHHHHHHHHHcCCeEEEeccCCCCCC
Confidence              1223444444555666777766653333433

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.24  E-value=0.04  Score=39.14  Aligned_cols=111  Identities=12%  Similarity=0.089  Sum_probs=67.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhc---CCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESK---GFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+.|+|+ |.+|.++|..++.+|.  .+++++++++.++....++...   .....+...  .+.+++            
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~~------------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEIC------------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGGG------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHHh------------
Confidence            4666787 9999999999999985  5999999998877666666543   112222111  111111            


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                      ..-|++|..+|....   ...+..   +.+..|.    .+.+...+.+.+.. .+.++++|.
T Consensus        68 ~daDvVVitaG~~~~---~g~~R~---dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          68 RDADMVVITAGPRQK---PGQSRL---ELVGATV----NILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             TTCSEEEECCCCCCC---TTCCHH---HHHHHHH----HHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             hCCcEEEEecccccC---CCCchh---hhhhhhH----HHHHHHHHHHHhhCCCeEEEEeCC
Confidence            236999999997532   122333   2444554    44555556555544 456666653

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.21  E-value=0.024  Score=40.21  Aligned_cols=110  Identities=7%  Similarity=-0.003  Sum_probs=67.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhc---CCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           20 TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESK---GFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ++.|.|+ |.+|.+++..++.++  ..+++++++++.++....++...   ..+......   |.++           . 
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~-----------~-   65 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYAD-----------L-   65 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGG-----------G-
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHHH-----------h-
Confidence            4667797 889999999999887  45999999998887666665542   122232222   2222           1 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                      ..-|++|.++|.....   ..+..+   .+..|    ..+.+...+.+.+.. .+.++++|.
T Consensus        66 ~~adivvitag~~~~~---g~~r~d---l~~~N----~~I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          66 KGSDVVIVAAGVPQKP---GETRLQ---LLGRN----ARVMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TTCSEEEECCCCCCCS---SCCHHH---HHHHH----HHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             cCCCEEEEecccccCC---Ccchhh---hhccc----cchHHHHHHHHHhcCCCcEEEEeCC
Confidence            2479999999975421   122222   33334    345666677766654 455555553

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.058  Score=36.49  Aligned_cols=87  Identities=15%  Similarity=0.181  Sum_probs=62.0

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .......++.|.|| |-+|+-++.+..+.|+++++++.+++...   .     ...-.++..|..|.+.+.+++...   
T Consensus         6 ~~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA---~-----~va~~~i~~~~~d~~~l~~~~~~~---   73 (111)
T d1kjqa2           6 ALRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA---M-----HVAHRSHVINMLDGDALRRVVELE---   73 (111)
T ss_dssp             TTSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG---G-----GGSSEEEECCTTCHHHHHHHHHHH---
T ss_pred             CCCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCch---h-----hcCCeEEECCCCCHHHHHHHHHhh---
Confidence            33445678999995 67999999999999999999998776321   0     112246778999999998888754   


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHH
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSS  122 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~  122 (266)
                         .+|++-.        .+++.+.+-+++
T Consensus        74 ---~~DviT~--------E~EnI~~~~L~~   92 (111)
T d1kjqa2          74 ---KPHYIVP--------EIEAIATDMLIQ   92 (111)
T ss_dssp             ---CCSEEEE--------CSSCSCHHHHHH
T ss_pred             ---CCceEEE--------EecCcCHHHHHH
Confidence               4788744        355556655443

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.18  E-value=0.015  Score=44.92  Aligned_cols=73  Identities=18%  Similarity=0.218  Sum_probs=54.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+++||+++|-|- +.+|.++|+.|.+.|++|+.++.+...++...++.   +...       .+.+          +.+
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~---g~~~-------~~~~----------~~~   93 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE---GADA-------VAPN----------AIY   93 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CCEE-------CCGG----------GTT
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc---CCcc-------cCCc----------ccc
Confidence            4689999999886 67999999999999999999999998887766654   2211       1111          122


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                      .-+.|+++-||-..
T Consensus        94 ~~~cDIl~PcA~~~  107 (230)
T d1leha1          94 GVTCDIFAPCALGA  107 (230)
T ss_dssp             TCCCSEEEECSCSC
T ss_pred             cccccEeccccccc
Confidence            25789999998743

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.18  E-value=0.03  Score=39.83  Aligned_cols=111  Identities=11%  Similarity=-0.005  Sum_probs=66.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecCC--hhHHHHHHHHHHh---cCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGRD--QNMINERIQEWES---KGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r~--~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+.|+|++|.+|.++|..++.+|.  .+++++.+  ++..+-...++..   ...+..+...|   .++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH-----------
Confidence            578999999999999999999984  48888854  3444434444443   12333332222   221           


Q ss_pred             cCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           93 FDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        93 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                      . ..-|++|..||.... +  ..+..   +.++.|.    .+.+...+.+.+.. .+.++.++.
T Consensus        68 ~-~~aDiVvitaG~~~~-~--g~~R~---dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 T-AGSDVVVITAGIPRQ-P--GQTRI---DLAGDNA----PIMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             G-TTCSEEEECCCCCCC-T--TCCHH---HHHHHHH----HHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             h-hhcCEEEEecccccc-c--CCchh---hHHHHHH----HHHHHHHHHHHhcCCCceEEEecC
Confidence            1 347999999996532 1  12322   3444444    45556667666654 556666654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.07  E-value=0.047  Score=38.63  Aligned_cols=111  Identities=14%  Similarity=0.087  Sum_probs=66.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           20 TALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+.|+|+ |.+|.+++..++.+|  ..+++++++++.++.....+...    .....+...  .|.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4677796 899999999999998  46999999998877665555432    223333222  22222           1


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                       ...|++|.++|.....   ..+..   +.++.|..    +.+...+.+.+.. .+.++++|.
T Consensus        68 -~dadvvvitag~~~~~---g~~r~---~l~~~N~~----i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1guza1          68 -ANSDIVIITAGLPRKP---GMTRE---DLLMKNAG----IVKEVTDNIMKHSKNPIIIVVSN  119 (142)
T ss_dssp             -TTCSEEEECCSCCCCT---TCCHH---HHHHHHHH----HHHHHHHHHHHHCSSCEEEECCS
T ss_pred             -cCCeEEEEEEecCCCC---CCchH---HHHHHHHH----HHHHHHHHhhccCCCeEEEEecC
Confidence             3479999999975321   11222   23333433    4455555555443 455555543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.03  E-value=0.017  Score=42.75  Aligned_cols=77  Identities=16%  Similarity=0.082  Sum_probs=56.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc-------------CCeeEEEeccCCCHHHH
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK-------------GFKVTGSVCDLSFGDQR   82 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~i   82 (266)
                      ..|++||..||+.|   ..+..|+++|++|+.++.++..++...+..++.             +....++..|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            36889999999887   467799999999999999999998887776543             23456777777765431


Q ss_pred             HHHHHHHHhhcCCcccEEEeccc
Q 024551           83 EKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      ..          ...|.++....
T Consensus        96 ~~----------~~~D~i~~~~~  108 (201)
T d1pjza_          96 DI----------GHCAAFYDRAA  108 (201)
T ss_dssp             HH----------HSEEEEEEESC
T ss_pred             cc----------cceeEEEEEee
Confidence            11          35677766444

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.02  E-value=0.02  Score=41.93  Aligned_cols=79  Identities=14%  Similarity=0.138  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHH-HHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ-REKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~~   94 (266)
                      .|.+|+|.|+ +|+|...+..++..|. +|+.+++++++++...+    .|....+   |-++.+. .++......   +
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~----~GAd~~i---n~~~~~~~~~~~~~~~~---~   96 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGATDFV---NPNDHSEPISQVLSKMT---N   96 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCCEEE---CGGGCSSCHHHHHHHHH---T
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH----cCCcEEE---cCCCcchhHHHHHHhhc---c
Confidence            5889999986 6688888888888876 58888888887754332    3433322   3222222 222222222   2


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|+++.+.|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            469999999995

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.89  E-value=0.028  Score=43.46  Aligned_cols=74  Identities=15%  Similarity=0.053  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++|++|=.||+.|   .++..|+++|++|++++.+++.++...+.+.+.+.++.+++.|+.+..            +++.
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~------------~~~~  105 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA------------FKNE  105 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC------------CCSC
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc------------cccc
Confidence            5678999999887   456779999999999999999998888888777778999999986642            1256


Q ss_pred             ccEEEeccc
Q 024551           97 LNILVNNAA  105 (266)
Q Consensus        97 id~lv~~ag  105 (266)
                      +|.++..-+
T Consensus       106 fD~I~~~~~  114 (251)
T d1wzna1         106 FDAVTMFFS  114 (251)
T ss_dssp             EEEEEECSS
T ss_pred             cchHhhhhh
Confidence            898887543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.88  E-value=0.046  Score=40.07  Aligned_cols=41  Identities=20%  Similarity=0.157  Sum_probs=34.8

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      +-|. |.+-+|.++|+.|+++|++|.+.+|++++.++++++-
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence            3344 4578999999999999999999999999998887764

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.85  E-value=0.099  Score=39.18  Aligned_cols=149  Identities=17%  Similarity=0.084  Sum_probs=82.0

Q ss_pred             CCccccCCCCEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHH
Q 024551           10 GDKKWSLRGMTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIE   87 (266)
Q Consensus        10 ~~~~~~~~~k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   87 (266)
                      .+......|+++++....  .....+++..|..+|..++.+.-+..                       .+.+   .+.+
T Consensus        17 ~~~~~~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~---~l~~   70 (209)
T d2fr1a2          17 AGEPARLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRD---ELAE   70 (209)
T ss_dssp             CCCCCCCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHH---HHHH
T ss_pred             CCCCCCCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHH---HHHH
Confidence            333344556666665433  34667777888888887765543221                       1122   2333


Q ss_pred             HHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCchh
Q 024551           88 TVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVAGAISIPRLSA  167 (266)
Q Consensus        88 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~~~~~~~~~~~  167 (266)
                      .+. .. +.++.+|+..+......... +      .....+...+.++|.+.   ......++.+++..... ..+....
T Consensus        71 ~~~-~~-~~~~~vv~l~~~~~~~~~~~-~------~~~~~~~~~l~l~qal~---~~~~~~~l~~vT~~a~~-~~~~d~~  137 (209)
T d2fr1a2          71 RLR-SV-GEVAGVLSLLAVDEAEPEEA-P------LALASLADTLSLVQAMV---SAELGCPLWTVTESAVA-TGPFERV  137 (209)
T ss_dssp             HHT-TS-CCCSEEEECTTTTCCCCSSC-G------GGCHHHHHHHHHHHHHH---HTTCCCCEEEEEESCSC-SSTTSCC
T ss_pred             Hhh-cc-CCCCeEEEeCCCCCCCCcch-h------HHHHHHHHHHHHHHHHH---hCCCCCcEEEEEcCCcc-cCCCccc
Confidence            322 22 56888888776543221111 0      11223445556666553   33334567777654322 2223334


Q ss_pred             hhhhHHHHHHHHHHHHHHhccCCcEEEEEe
Q 024551          168 YAASKGAINQLTKNLACEWATDSIRVNAVS  197 (266)
Q Consensus       168 y~~sK~al~~~~~~~a~el~~~gi~v~~i~  197 (266)
                      -....+++-+|+|+++.|+....+++..+.
T Consensus       138 ~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         138 RNAAHGALWGVGRVIALENPAVWGGLVDVP  167 (209)
T ss_dssp             SCGGGHHHHHHHHHHHHHCGGGEEEEEEEC
T ss_pred             CCHhHHhHHHHHHHHHHhCCCceEEEEECC
Confidence            467789999999999999887555666654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.81  E-value=0.021  Score=43.05  Aligned_cols=73  Identities=23%  Similarity=0.238  Sum_probs=54.0

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      -+++||+||=.|+++|+   ++..++..|+ +|+.++.+++.++...+    +..++.++.+|+.+              
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~----N~~~~~~~~~D~~~--------------  103 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKR----NCGGVNFMVADVSE--------------  103 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHH----HCTTSEEEECCGGG--------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHH----ccccccEEEEehhh--------------
Confidence            46889999999988883   3455777885 49999999887654433    33567888898853              


Q ss_pred             cCCcccEEEeccccc
Q 024551           93 FDGKLNILVNNAALV  107 (266)
Q Consensus        93 ~~~~id~lv~~ag~~  107 (266)
                      .++++|++|.|+...
T Consensus       104 l~~~fD~Vi~NPPfg  118 (197)
T d1ne2a_         104 ISGKYDTWIMNPPFG  118 (197)
T ss_dssp             CCCCEEEEEECCCC-
T ss_pred             cCCcceEEEeCcccc
Confidence            136899999998753

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.79  E-value=0.053  Score=38.83  Aligned_cols=115  Identities=13%  Similarity=0.132  Sum_probs=68.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ..+.|.|+ |.+|.++|..++.++ ..+++++++++..+....++...    +.+..+...+  +.++           .
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~-----------~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD-----------L   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc-----------c
Confidence            35677785 899999999888887 45999999998877666666542    2233333222  1211           1


Q ss_pred             CCcccEEEecccccc-ccCC-CCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           94 DGKLNILVNNAALVV-MKRA-TEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        94 ~~~id~lv~~ag~~~-~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                       ..-|++|.++|... ++.. .+.+..   +.+..|    ..+.+.+.+.+.+.. .+.++++|.
T Consensus        70 -~~advvvitag~~~~~g~~~~~~~R~---~l~~~N----~~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          70 -AGADVVIVTAGFTKAPGKSDKEWNRD---DLLPLN----NKIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             -TTCSEEEECCSCSSCTTCCSTTCCGG---GGHHHH----HHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             -CCCcEEEEecccccCCCCCccccchh---HHHHHH----HHHHHHHHHHHHhcCCCeEEEEecC
Confidence             34799999999753 2211 111111   123334    345566666666544 455666654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.65  E-value=0.033  Score=40.33  Aligned_cols=85  Identities=9%  Similarity=0.062  Sum_probs=54.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHH-------hcCCeeEEEeccCCCHHHHHHHHHH---H
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE-------SKGFKVTGSVCDLSFGDQREKLIET---V   89 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~-------~~~~~~~~~~~D~~~~~~i~~~~~~---~   89 (266)
                      ++-+.|. +-+|.++|+.|+++|++|.+.+|++++.+.+.+.-.       +......++..-+.+...++.++..   +
T Consensus         3 kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            4556654 789999999999999999999999988776553311       1112334555666777777776654   2


Q ss_pred             HhhcCCcccEEEecccc
Q 024551           90 SSVFDGKLNILVNNAAL  106 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~  106 (266)
                      .... .+=+++|.+.-.
T Consensus        82 ~~~l-~~g~iiid~st~   97 (162)
T d3cuma2          82 LAHI-APGTLVLECSTI   97 (162)
T ss_dssp             HHHS-CTTCEEEECSCC
T ss_pred             cccC-CCCCEEEECCCC
Confidence            2222 222455554443

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.61  E-value=0.41  Score=38.37  Aligned_cols=84  Identities=15%  Similarity=0.121  Sum_probs=58.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .+|++||=.++..| |.++  +++..+.+|+.++.++..++...+.+..++. ++.++..|..+.      .++..+.. 
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~~-  213 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKEG-  213 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHTT-
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhhh-
Confidence            57899997776554 2233  3455677899999999999998888877763 678888876532      22333332 


Q ss_pred             CcccEEEeccccccc
Q 024551           95 GKLNILVNNAALVVM  109 (266)
Q Consensus        95 ~~id~lv~~ag~~~~  109 (266)
                      .++|.+|.++.....
T Consensus       214 ~~fD~Vi~DpP~~~~  228 (318)
T d1wxxa2         214 ERFDLVVLDPPAFAK  228 (318)
T ss_dssp             CCEEEEEECCCCSCC
T ss_pred             cCCCEEEEcCCcccc
Confidence            579999999876543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.55  E-value=0.012  Score=43.04  Aligned_cols=43  Identities=21%  Similarity=0.261  Sum_probs=37.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN   56 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~   56 (266)
                      .+++||+++|.|-|.-+|+-++..|.++|++|.++.+....++
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            5689999999999999999999999999999998876655443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.009  Score=43.97  Aligned_cols=44  Identities=23%  Similarity=0.353  Sum_probs=38.6

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHH
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN   56 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~   56 (266)
                      -.+++||.++|.|-|.-+|+-++..|+++|++|.++.+....+.
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            35789999999999999999999999999999998887665443

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.35  E-value=0.025  Score=44.43  Aligned_cols=74  Identities=16%  Similarity=0.171  Sum_probs=57.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ...|++||=.|+++|+   ++..+++.|++|+.++.++..++...+....++....+++.|+.+          ...  .
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~----------~~~--~  182 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA----------ALP--F  182 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH----------HGG--G
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc----------ccc--c
Confidence            3578999999999986   344677889999999999999998888887777777777776421          111  1


Q ss_pred             CcccEEEec
Q 024551           95 GKLNILVNN  103 (266)
Q Consensus        95 ~~id~lv~~  103 (266)
                      ++.|+++.|
T Consensus       183 ~~fD~V~an  191 (254)
T d2nxca1         183 GPFDLLVAN  191 (254)
T ss_dssp             CCEEEEEEE
T ss_pred             cccchhhhc
Confidence            579999876

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.28  E-value=0.026  Score=42.37  Aligned_cols=83  Identities=16%  Similarity=0.120  Sum_probs=63.5

Q ss_pred             CCEEE-EecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GMTAL-VTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k~vl-ItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      |.+++ +|.|+||...++...+ . +.+|+.++++++.++...+.+...+.++.+++.++++...+   +....   ..+
T Consensus        24 ~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~~---~~~   95 (192)
T d1m6ya2          24 EKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTLG---IEK   95 (192)
T ss_dssp             TCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHTT---CSC
T ss_pred             CCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHcC---CCC
Confidence            44444 6888888888888876 3 46899999999999988888887788999999998865442   22211   257


Q ss_pred             ccEEEecccccc
Q 024551           97 LNILVNNAALVV  108 (266)
Q Consensus        97 id~lv~~ag~~~  108 (266)
                      +|.++..-|++.
T Consensus        96 vdgIl~DlGvSs  107 (192)
T d1m6ya2          96 VDGILMDLGVST  107 (192)
T ss_dssp             EEEEEEECSCCH
T ss_pred             cceeeeccchhH
Confidence            999999999864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.21  E-value=0.068  Score=39.44  Aligned_cols=54  Identities=17%  Similarity=0.124  Sum_probs=41.4

Q ss_pred             CccCCccccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH
Q 024551            7 PVFGDKKWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE   61 (266)
Q Consensus         7 ~~~~~~~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~   61 (266)
                      |.++........-.|+|.|| +-.|...++-....|++|.+++.+.++++++.+.
T Consensus        18 ~~l~~~~g~V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          18 PMMMTAAGTVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             SCEEETTEEECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred             CCcccccCCcCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            44444444455668999998 5688888888899999999999999887766553

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.18  E-value=0.021  Score=41.01  Aligned_cols=42  Identities=17%  Similarity=0.231  Sum_probs=35.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l   62 (266)
                      ++.+.|+ |.+|.++++.|.+.| ++|.+++|++++.+++.++.
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            4566776 889999999999887 88999999999888776653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.16  E-value=0.056  Score=36.68  Aligned_cols=35  Identities=26%  Similarity=0.337  Sum_probs=30.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .|.++|.|| |-+|..+|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            378999988 67999999999999999999887553

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.13  E-value=0.086  Score=40.21  Aligned_cols=44  Identities=18%  Similarity=0.097  Sum_probs=37.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWE   63 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~   63 (266)
                      .+++||..||+.|   ..+..|+++|++|+.++-+++.++...+...
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~   88 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQN   88 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhh
Confidence            6789999999887   4688899999999999999999887776643

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.08  E-value=0.012  Score=42.59  Aligned_cols=34  Identities=21%  Similarity=0.190  Sum_probs=31.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM   54 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~   54 (266)
                      +++|.|+ |.+|..++..|++.|++|.+++|++..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            6888998 999999999999999999999998753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.04  E-value=0.067  Score=36.65  Aligned_cols=36  Identities=19%  Similarity=0.268  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .+|+++|.|| |-+|-.+|..|+++|.+|.++.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3688988887 78999999999999999999887653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.03  E-value=0.059  Score=37.03  Aligned_cols=36  Identities=22%  Similarity=0.190  Sum_probs=31.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .++|+++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            35788988876 7899999999999999999987754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.94  E-value=0.098  Score=38.82  Aligned_cols=76  Identities=17%  Similarity=0.198  Sum_probs=57.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +++++||=.||+.|.   .+..|+++|++|+.++.++..++...+.....+ ..+.+...|+.+..            +.
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~------------~~   93 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT------------FD   93 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC------------CC
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc------------cc
Confidence            456689999997653   567889999999999999999988877776655 35777788877543            12


Q ss_pred             CcccEEEecccc
Q 024551           95 GKLNILVNNAAL  106 (266)
Q Consensus        95 ~~id~lv~~ag~  106 (266)
                      +.+|+++.+.-.
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            568998875543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.77  E-value=0.18  Score=40.65  Aligned_cols=82  Identities=18%  Similarity=0.101  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcCC--eeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKGF--KVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .|++||=.++..|.   .+..+++.|+ +|+.++.++..++...+.+..++.  +++++..|+.      ..........
T Consensus       145 ~g~~VLDl~~g~G~---~si~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~~  215 (324)
T d2as0a2         145 PGDRVLDVFTYTGG---FAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKKG  215 (324)
T ss_dssp             TTCEEEETTCTTTH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHTT
T ss_pred             CCCeeecccCcccc---hhhhhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhcc
Confidence            48889877765442   2334456776 699999999999888888777653  6777777754      2333333332


Q ss_pred             CCcccEEEecccccc
Q 024551           94 DGKLNILVNNAALVV  108 (266)
Q Consensus        94 ~~~id~lv~~ag~~~  108 (266)
                       .++|++|.++....
T Consensus       216 -~~fD~Vi~DpP~~~  229 (324)
T d2as0a2         216 -EKFDIVVLDPPAFV  229 (324)
T ss_dssp             -CCEEEEEECCCCSC
T ss_pred             -CCCCchhcCCcccc
Confidence             68999999988654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.077  Score=36.50  Aligned_cols=34  Identities=15%  Similarity=0.185  Sum_probs=29.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .|.++|.|| |-||..+|..|++.|.+|.++.|..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            478999998 4699999999999999999998853

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.69  E-value=0.026  Score=39.21  Aligned_cols=70  Identities=16%  Similarity=0.099  Sum_probs=49.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      |-++|.|. +.+|+.+++.|.  |.+|+++..+++..+...    ..  .+.++..|.++++.++++--       .+.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a~i-------~~A~   64 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----RS--GANFVHGDPTRVSDLEKANV-------RGAR   64 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----HT--TCEEEESCTTSHHHHHHTTC-------TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----hc--CccccccccCCHHHHHHhhh-------hcCc
Confidence            45777775 779999999994  567888888888765443    22  46678899999877665211       4567


Q ss_pred             EEEecc
Q 024551           99 ILVNNA  104 (266)
Q Consensus        99 ~lv~~a  104 (266)
                      .+|...
T Consensus        65 ~vi~~~   70 (129)
T d2fy8a1          65 AVIVNL   70 (129)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            777644

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.65  E-value=0.084  Score=35.90  Aligned_cols=34  Identities=15%  Similarity=0.238  Sum_probs=29.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .|+++|.|| |-+|..+|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478888887 7799999999999999999998854

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.65  E-value=0.094  Score=39.84  Aligned_cols=78  Identities=22%  Similarity=0.252  Sum_probs=61.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +|.+||..|+++|.-.++.-+++  |.+|+.+.++++..+...+.+.+.+ .++.++..|..+-         . .. .+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g---------~-~~-~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG---------F-PP-KA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---------C-GG-GC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC---------C-cc-cC
Confidence            57899999999999888877776  4679999999988888888887765 6789999987631         1 11 16


Q ss_pred             cccEEEeccccc
Q 024551           96 KLNILVNNAALV  107 (266)
Q Consensus        96 ~id~lv~~ag~~  107 (266)
                      +.|.++.+++..
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            899999988864

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.65  E-value=0.064  Score=36.81  Aligned_cols=34  Identities=21%  Similarity=0.276  Sum_probs=30.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      -|.++|.|| |-||..+|..|++.|.+|.++.+.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            478888887 6799999999999999999988755

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.64  E-value=0.02  Score=42.83  Aligned_cols=41  Identities=17%  Similarity=0.170  Sum_probs=34.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQE   61 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~   61 (266)
                      .+.|.|| |..|.++|..|++.|++|.+.+|+++..+++.+.
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            5778887 4589999999999999999999998877665543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.61  E-value=0.026  Score=40.53  Aligned_cols=41  Identities=15%  Similarity=0.158  Sum_probs=34.8

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      +.|.| .|-+|.++++.|.+.|+++++..|+.++.+++.+++
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            44554 578999999999999999999999999888777665

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.61  E-value=0.2  Score=35.21  Aligned_cols=111  Identities=8%  Similarity=-0.050  Sum_probs=66.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC--eEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .+.|.|+ |.+|.++|..++.+|.  .+++++++++..+..+-++...    .....+...  .|.++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~-----------~   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHH-----------h
Confidence            4667786 9999999999998884  4999999998877665555432    222222211  11221           1


Q ss_pred             CCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcC-CCeEEEEec
Q 024551           94 DGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASG-NASIVFMSS  155 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~vss  155 (266)
                       ..-|++|..+|.....   ..+..   +.+..|    ..+.+...+.+.+.. .+.++++|.
T Consensus        68 -~~adiVvitag~~~~~---g~~r~---~l~~~n----~~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          68 -KGSEIIVVTAGLARKP---GMTRL---DLAHKN----AGIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             -TTCSEEEECCCCCCCS---SCCHH---HHHHHH----HHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             -ccccEEEEeccccCCC---CCchH---HHHHHh----hHHHHHHHHHHHhhCCCcEEEEecC
Confidence             3479999999965321   12222   233333    345555566666654 455555554

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.60  E-value=0.025  Score=41.54  Aligned_cols=38  Identities=24%  Similarity=0.270  Sum_probs=34.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCC
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRD   51 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~   51 (266)
                      .+++||.++|.|-|.-+|+-++..|+++|++|..+..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            37999999999999999999999999999999877654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.52  E-value=0.044  Score=42.51  Aligned_cols=36  Identities=28%  Similarity=0.382  Sum_probs=30.6

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRD   51 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~   51 (266)
                      .+++++|+|.|+ ||+|..++..|+..|.. +.+++.+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            478899999996 78999999999999975 6777653

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.46  E-value=0.074  Score=38.13  Aligned_cols=114  Identities=10%  Similarity=0.149  Sum_probs=61.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCC-------eEEEecCCh--hHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGA-------SVHTCGRDQ--NMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIET   88 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~-------~v~~~~r~~--~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~   88 (266)
                      ..|.|+||+|.+|.+++..|+..+.       .+++.+.++  ..++.+.-++.... .....+..--.+.+.       
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------   76 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIA-------   76 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHH-------
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccc-------
Confidence            3789999999999999999987652       255665544  44444444444432 122211111111111       


Q ss_pred             HHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc-C-CCeEEEEe
Q 024551           89 VSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS-G-NASIVFMS  154 (266)
Q Consensus        89 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~-~g~iv~vs  154 (266)
                          + ...|++|..+|.......   +.++   .++.|    ..+.+...+.+.+. + .+.++.+|
T Consensus        77 ----~-~~~dvVVitag~~~~~g~---sr~d---ll~~N----~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          77 ----F-KDLDVAILVGSMPRRDGM---ERKD---LLKAN----VKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             ----T-TTCSEEEECCSCCCCTTC---CTTT---THHHH----HHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----c-CCceEEEEecccCCCCCC---chhH---HHHHh----HHHHHHHHHHHHhhCCCceEEEEec
Confidence                1 358999999997643211   1111   23333    35566666666553 3 33455554

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.091  Score=35.59  Aligned_cols=34  Identities=21%  Similarity=0.172  Sum_probs=29.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .|.++|.|| +-+|..+|..|++.|.+|.++.|.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            367888887 7799999999999999999998854

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.34  E-value=0.95  Score=36.00  Aligned_cols=83  Identities=17%  Similarity=0.083  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      ++++||=..+.+|   .++.++++.|++|+.++.++..++...+.+..++   .++.++..|+.      +++++..+..
T Consensus       132 ~~~rVLdlf~~tG---~~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~~  202 (309)
T d2igta1         132 RPLKVLNLFGYTG---VASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERRG  202 (309)
T ss_dssp             SCCEEEEETCTTC---HHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHHT
T ss_pred             CCCeEEEecCCCc---HHHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhcC
Confidence            5788886665554   2334456789999999999999988887665443   35788887764      3444444443


Q ss_pred             CCcccEEEeccccccc
Q 024551           94 DGKLNILVNNAALVVM  109 (266)
Q Consensus        94 ~~~id~lv~~ag~~~~  109 (266)
                       .+.|+||..+..+..
T Consensus       203 -~~fD~IilDPP~f~~  217 (309)
T d2igta1         203 -STYDIILTDPPKFGR  217 (309)
T ss_dssp             -CCBSEEEECCCSEEE
T ss_pred             -CCCCEEEECCCcccc
Confidence             679999999886543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.25  E-value=0.42  Score=33.35  Aligned_cols=87  Identities=9%  Similarity=-0.025  Sum_probs=54.3

Q ss_pred             CCCEEEEecCC---CchHHHHHHHHHHCCCeEEEecCChhHHH--HHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           17 RGMTALVTGGT---RGIGYAIVEELARFGASVHTCGRDQNMIN--ERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        17 ~~k~vlItGas---~giG~aia~~la~~G~~v~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      +-|++.|.|+|   +..|..+++.|.+.|++|+.+..+.+...  .....+.+....+..+.. +..++.+..+++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence            67999999999   57999999999999999988866543211  011111121212221111 1346677778888777


Q ss_pred             hcCCcccEEEeccccc
Q 024551           92 VFDGKLNILVNNAALV  107 (266)
Q Consensus        92 ~~~~~id~lv~~ag~~  107 (266)
                      .  + +..++...|..
T Consensus        97 ~--g-~k~v~~~~G~~  109 (139)
T d2d59a1          97 K--G-AKVVWFQYNTY  109 (139)
T ss_dssp             H--T-CSEEEECTTCC
T ss_pred             h--C-CCEEEEecccc
Confidence            5  2 56777767654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.23  E-value=0.14  Score=34.78  Aligned_cols=35  Identities=26%  Similarity=0.165  Sum_probs=30.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      ..|.++|.|| |-||..+|..|++.|.+|.++.+..
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            4588999988 7799999999999999999887644

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.22  E-value=0.24  Score=34.54  Aligned_cols=76  Identities=14%  Similarity=0.158  Sum_probs=53.3

Q ss_pred             EEEEecCCCchHHHHHHHHHH-CCCeEE-EecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           20 TALVTGGTRGIGYAIVEELAR-FGASVH-TCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~-~G~~v~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ++.|.|++|.+|+++++...+ .++.++ .+++..+ +    ..+......+   ..|++.++.....++.+.+.   .+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~----~~~~~~~~Dv---vIDFS~p~~~~~~~~~~~~~---~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-L----SLLTDGNTEV---VIDFTHPDVVMGNLEFLIDN---GI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-T----HHHHTTTCSE---EEECCCTTTHHHHHHHHHHT---TC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-h----hhhccccCCE---EEEcccHHHHHHHHHHHHhc---CC
Confidence            478999999999999998766 457765 4454332 1    1222223343   46999999999999998875   36


Q ss_pred             cEEEecccc
Q 024551           98 NILVNNAAL  106 (266)
Q Consensus        98 d~lv~~ag~  106 (266)
                      -+++-..|.
T Consensus        70 ~~ViGTTG~   78 (135)
T d1yl7a1          70 HAVVGTTGF   78 (135)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEecccc
Confidence            677766665

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.16  E-value=0.45  Score=33.57  Aligned_cols=79  Identities=10%  Similarity=0.067  Sum_probs=55.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .++|+++|=.|+++|   ++..+.+.+|+ +|+.+..+++..+.+.+-+...+  .++.+++.|+..      +++.   
T Consensus        12 ~~~g~~vlDl~~GtG---~~~iea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~~---   79 (152)
T d2esra1          12 YFNGGRVLDLFAGSG---GLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AIDC---   79 (152)
T ss_dssp             CCCSCEEEEETCTTC---HHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHHH---
T ss_pred             hCCCCeEEEcCCccC---HHHHHHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cccc---
Confidence            468999997776655   23445567886 69999999999888888777654  468888888432      2222   


Q ss_pred             hcCCcccEEEecccc
Q 024551           92 VFDGKLNILVNNAAL  106 (266)
Q Consensus        92 ~~~~~id~lv~~ag~  106 (266)
                       ...+.|+++..+..
T Consensus        80 -~~~~fDiIf~DPPy   93 (152)
T d2esra1          80 -LTGRFDLVFLDPPY   93 (152)
T ss_dssp             -BCSCEEEEEECCSS
T ss_pred             -cccccceeEechhh
Confidence             12579999998764

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=94.07  E-value=0.13  Score=37.44  Aligned_cols=81  Identities=11%  Similarity=0.023  Sum_probs=52.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .+|+++|=.|+++|   .+..+++++|++|+.++.++..++.+.+-+...+....+...|..      .+........ .
T Consensus        40 ~~g~~vLDl~~G~G---~~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d------~~~~~~~~~~-~  109 (171)
T d1ws6a1          40 PRRGRFLDPFAGSG---AVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVE------VFLPEAKAQG-E  109 (171)
T ss_dssp             TTCCEEEEETCSSC---HHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHH------HHHHHHHHTT-C
T ss_pred             cCCCeEEEeccccc---hhhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehh------cccccccccC-C
Confidence            36888886666555   244567788999999999999998888777766544333333222      1222222222 5


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      ++|+++.++.+
T Consensus       110 ~fD~If~DPPY  120 (171)
T d1ws6a1         110 RFTVAFMAPPY  120 (171)
T ss_dssp             CEEEEEECCCT
T ss_pred             ccceeEEcccc
Confidence            79999998764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.04  E-value=0.032  Score=38.87  Aligned_cols=73  Identities=16%  Similarity=0.184  Sum_probs=53.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEE-ecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHT-CGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++.|.|++|.+|+++++.+.++|+.++. .+++...      .+  ....+   ..|+|.++...+.++.+.+.   ++-
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~--~~~DV---vIDFS~p~~~~~~l~~~~~~---~~p   67 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------EL--DSPDV---VIDFSSPEALPKTVDLCKKY---RAG   67 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------EC--SCCSE---EEECSCGGGHHHHHHHHHHH---TCE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hh--ccCCE---EEEecCHHHHHHHHHHHHhc---CCC
Confidence            5899999999999999999999999764 4443221      01  01232   46999999999999999886   356


Q ss_pred             EEEecccc
Q 024551           99 ILVNNAAL  106 (266)
Q Consensus        99 ~lv~~ag~  106 (266)
                      +++-..|.
T Consensus        68 ~ViGTTG~   75 (128)
T d1vm6a3          68 LVLGTTAL   75 (128)
T ss_dssp             EEECCCSC
T ss_pred             EEEEcCCC
Confidence            77776775

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.03  E-value=0.14  Score=38.42  Aligned_cols=76  Identities=16%  Similarity=0.034  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ++.+||=.||+.|.   ++..|++.|++|+.++.+++.++...+.+...+..+..+..|..+...           ....
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~-----------~~~~  102 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF-----------EDKT  102 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS-----------CTTC
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccc-----------cCcC
Confidence            34578999998885   677889999999999999999988888777777778888888776321           0156


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++....+
T Consensus       103 fD~I~~~~~l  112 (226)
T d1ve3a1         103 FDYVIFIDSI  112 (226)
T ss_dssp             EEEEEEESCG
T ss_pred             ceEEEEecch
Confidence            8998887553

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.00  E-value=0.1  Score=35.68  Aligned_cols=34  Identities=29%  Similarity=0.380  Sum_probs=29.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      +|.++|.|| |-+|..+|..|++.|.+|.++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            478888887 7899999999999999999988754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.97  E-value=0.082  Score=38.26  Aligned_cols=40  Identities=28%  Similarity=0.307  Sum_probs=35.6

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM   54 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~   54 (266)
                      ..+.||+++|.|-. -+|+.+|+.+...|++|+++..++.+
T Consensus        20 ~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccch
Confidence            45789999999864 69999999999999999999998854

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.89  E-value=0.11  Score=34.98  Aligned_cols=34  Identities=24%  Similarity=0.327  Sum_probs=29.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .|.++|.|| +-+|..+|..|++.|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            477888876 7899999999999999999988754

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.80  E-value=0.26  Score=36.04  Aligned_cols=75  Identities=20%  Similarity=0.142  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +|.+||=.|+++|   .++.+|++.+.+|+.++.+++.++...+.+++.+  .++.+++.|..+.          .... 
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~----------~~~~-   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA----------LCKI-   98 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH----------HTTS-
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhc----------cccc-
Confidence            5888888888877   4455677788899999999999999988888775  4788888874211          1122 


Q ss_pred             CcccEEEeccc
Q 024551           95 GKLNILVNNAA  105 (266)
Q Consensus        95 ~~id~lv~~ag  105 (266)
                      ..+|.++.+.+
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            57899987654

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.58  E-value=0.24  Score=37.32  Aligned_cols=80  Identities=16%  Similarity=0.165  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|.+||-.|+++|.-.++..++...+.+|+.++.+++.++...+.+...+ .++.++..|..+.-          .. .+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~-~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PE-FS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GG-GC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------cc-cc
Confidence            57899999988887666555555556789999999999988888887654 46667766654311          11 15


Q ss_pred             cccEEEeccccc
Q 024551           96 KLNILVNNAALV  107 (266)
Q Consensus        96 ~id~lv~~ag~~  107 (266)
                      ++|.++.+++..
T Consensus       144 ~fD~I~~~~~~~  155 (213)
T d1dl5a1         144 PYDVIFVTVGVD  155 (213)
T ss_dssp             CEEEEEECSBBS
T ss_pred             chhhhhhhccHH
Confidence            799999887753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.52  E-value=0.12  Score=35.34  Aligned_cols=32  Identities=25%  Similarity=0.229  Sum_probs=28.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecCC
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGRD   51 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r~   51 (266)
                      |.++|.|| +-||..+|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            57888887 779999999999999999988875

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.45  E-value=0.22  Score=33.61  Aligned_cols=36  Identities=19%  Similarity=0.138  Sum_probs=31.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .+|.++|.|| |-+|..+|..|++.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            4789998887 77999999999999999999888553

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.41  E-value=0.13  Score=35.12  Aligned_cols=34  Identities=21%  Similarity=0.228  Sum_probs=30.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .|.++|.|| +-||..+|..|.+.|.+|.++.|.+
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            478888888 7799999999999999999998855

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.38  E-value=0.076  Score=39.16  Aligned_cols=37  Identities=19%  Similarity=0.181  Sum_probs=32.1

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      ..+.|.|+|.|| +--|.+.|..|+++|++|.++.++.
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            356799999998 5678999999999999999998865

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.23  E-value=0.52  Score=31.62  Aligned_cols=82  Identities=10%  Similarity=0.086  Sum_probs=54.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ||++||.=-..-+-..+...|.+.|++|+....+....-   +.+++....+.++-.++-+.+. -.++.++++.. ..+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al---~~~~~~~~dliilD~~mp~~~G-~e~~~~ir~~~-~~~   75 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAV---EKYKELKPDIVTMDITMPEMNG-IDAIKEIMKID-PNA   75 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHH---HHHHHHCCSEEEEECSCGGGCH-HHHHHHHHHHC-TTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHH---HHHHhccCCEEEEecCCCCCCH-HHHHHHHHHhC-CCC
Confidence            789999999999999999999999999987666554332   3333334455554444444433 45667777665 456


Q ss_pred             cEEEecc
Q 024551           98 NILVNNA  104 (266)
Q Consensus        98 d~lv~~a  104 (266)
                      -+++..+
T Consensus        76 pvi~ls~   82 (118)
T d1u0sy_          76 KIIVCSA   82 (118)
T ss_dssp             CEEEEEC
T ss_pred             cEEEEEc
Confidence            6666643

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.12  E-value=0.2  Score=39.98  Aligned_cols=75  Identities=13%  Similarity=0.084  Sum_probs=52.9

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .++||+||-.|++.|+   ++..+++.|+ +|+.++.++... ...+...+.  ..++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            4689999999999886   5677888897 588888887643 334444333  3578888888876531          


Q ss_pred             hcCCcccEEEecc
Q 024551           92 VFDGKLNILVNNA  104 (266)
Q Consensus        92 ~~~~~id~lv~~a  104 (266)
                       ...++|+++...
T Consensus        99 -~~~~~D~Ivse~  110 (311)
T d2fyta1          99 -PVEKVDVIISEW  110 (311)
T ss_dssp             -SCSCEEEEEECC
T ss_pred             -ccccceEEEEee
Confidence             114789998753

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.10  E-value=0.16  Score=36.07  Aligned_cols=36  Identities=19%  Similarity=0.193  Sum_probs=29.3

Q ss_pred             CCEEEEe-cCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           18 GMTALVT-GGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        18 ~k~vlIt-Gas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      ++.++|. .+++-||.++|..|+++|.+|.++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            5555555 46688999999999999999999988653

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.02  E-value=0.046  Score=40.32  Aligned_cols=42  Identities=19%  Similarity=0.301  Sum_probs=32.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHh
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWES   64 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~   64 (266)
                      .+.|.|+ |..|.++|..|++.|.+|.+.+|..+.  +..+.++.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            5677887 779999999999999999999996552  34455543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.01  E-value=0.041  Score=46.49  Aligned_cols=35  Identities=31%  Similarity=0.511  Sum_probs=29.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRD   51 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~   51 (266)
                      +++..|||.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            56789999999 67999999999999974 7777653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.92  E-value=0.051  Score=42.37  Aligned_cols=34  Identities=21%  Similarity=0.182  Sum_probs=28.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      +|+|+|.|| |-=|.+.|.+|+++|++|+++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999988 4468899999999999999997653

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.84  E-value=0.078  Score=40.48  Aligned_cols=34  Identities=38%  Similarity=0.380  Sum_probs=29.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .|.|+|.|| |-.|.++|.+|+++|++|.++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            357888888 6789999999999999999999853

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.83  E-value=0.34  Score=35.66  Aligned_cols=76  Identities=18%  Similarity=0.131  Sum_probs=57.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC---CeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG---FKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      ..+++||=.|+++|   .++..+++.+.+|.+++.++...+...+.+...+   .++.++..|+.+.-.           
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~-----------  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK-----------  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-----------
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhc-----------
Confidence            46889999998877   4456777888999999999988887777665543   468888899864311           


Q ss_pred             cCCcccEEEecccc
Q 024551           93 FDGKLNILVNNAAL  106 (266)
Q Consensus        93 ~~~~id~lv~~ag~  106 (266)
                       +..+|+++.+...
T Consensus       117 -~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 -DRKYNKIITNPPI  129 (194)
T ss_dssp             -TSCEEEEEECCCS
T ss_pred             -cCCceEEEEcccE
Confidence             1579999998764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.71  E-value=0.28  Score=33.93  Aligned_cols=35  Identities=17%  Similarity=0.192  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      ++|.++|.|| |-+|..+|..|++.|.+|.++.+.+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4788999977 7899999999999999999988754

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.43  E-value=0.12  Score=41.24  Aligned_cols=24  Identities=21%  Similarity=0.074  Sum_probs=20.9

Q ss_pred             CCchHHHHHHHHHHCCCeEEEecC
Q 024551           27 TRGIGYAIVEELARFGASVHTCGR   50 (266)
Q Consensus        27 s~giG~aia~~la~~G~~v~~~~r   50 (266)
                      ||..|.++|++|..+|+.|+++.+
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             chHHHHHHHHHHHHcCCEEEEEec
Confidence            357899999999999999998754

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.27  E-value=0.47  Score=35.94  Aligned_cols=80  Identities=18%  Similarity=0.172  Sum_probs=60.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC------CeeEEEeccCCCHHHHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG------FKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .|.+||-.|+++|.-.++.-++.....+|+.+.++++.++...+.+...+      .++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            57899999999998888887888878899999999999888877776432      45677777764211          


Q ss_pred             hhcCCcccEEEeccccc
Q 024551           91 SVFDGKLNILVNNAALV  107 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~  107 (266)
                      .. .+++|.++.+++..
T Consensus       146 ~~-~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AE-EAPYDAIHVGAAAP  161 (224)
T ss_dssp             GG-GCCEEEEEECSBBS
T ss_pred             ch-hhhhhhhhhhcchh
Confidence            01 15799999988754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.26  E-value=0.2  Score=34.34  Aligned_cols=35  Identities=17%  Similarity=0.209  Sum_probs=30.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      ..|.++|.|| |-||..+|..|.+.|.+|.++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            3688999988 7899999999999999999987744

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.23  E-value=0.062  Score=39.49  Aligned_cols=35  Identities=17%  Similarity=0.210  Sum_probs=29.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCCh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQ   52 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~   52 (266)
                      .+|+|+|.|| |-.|...|..|+++|++ |.++.|..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            3688999998 67899999999999985 88887754

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=92.21  E-value=0.41  Score=37.57  Aligned_cols=77  Identities=14%  Similarity=0.131  Sum_probs=55.8

Q ss_pred             CCEEEEec-CCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           18 GMTALVTG-GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        18 ~k~vlItG-as~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +..++=.| |||.||.+++..+  ...+|+.++.+++.++-..+-.+..+. ++.+++.|+.++-.            +.
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~~------------~~  174 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA------------GQ  174 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT------------TC
T ss_pred             ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeecccccccC------------CC
Confidence            34566566 5556666666544  347899999999998887777766654 69999999875421            25


Q ss_pred             cccEEEecccccc
Q 024551           96 KLNILVNNAALVV  108 (266)
Q Consensus        96 ~id~lv~~ag~~~  108 (266)
                      ++|++|.|+.+..
T Consensus       175 ~fDlIvsNPPYi~  187 (274)
T d2b3ta1         175 QFAMIVSNPPYID  187 (274)
T ss_dssp             CEEEEEECCCCBC
T ss_pred             ceeEEEecchhhh
Confidence            7999999998764

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=92.12  E-value=1  Score=35.07  Aligned_cols=79  Identities=15%  Similarity=0.134  Sum_probs=54.1

Q ss_pred             CCEEEEecCCCc-hHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           18 GMTALVTGGTRG-IGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        18 ~k~vlItGas~g-iG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .++++-.|+++| |+.+++ +  ...++|+.++.+++.++-..+-....+  .++.+...|+.+.         ..+.+ 
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~-  177 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF-  177 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT-
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc-
Confidence            345665666555 444443 2  356889999999999888777776654  3677778888644         22223 


Q ss_pred             CcccEEEeccccccc
Q 024551           95 GKLNILVNNAALVVM  109 (266)
Q Consensus        95 ~~id~lv~~ag~~~~  109 (266)
                      +++|++|.|+.+...
T Consensus       178 ~~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         178 ASIEMILSNPPYVKS  192 (271)
T ss_dssp             TTCCEEEECCCCBCG
T ss_pred             CcccEEEEcccccCc
Confidence            689999999997643

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.98  E-value=0.12  Score=36.75  Aligned_cols=37  Identities=14%  Similarity=0.040  Sum_probs=29.7

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHH
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINER   58 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~   58 (266)
                      +-|.|. |.+|.++|+.|.++|+.|+..+++++.....
T Consensus         3 IgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            455554 8999999999999999999988877655443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=91.93  E-value=0.13  Score=37.94  Aligned_cols=38  Identities=29%  Similarity=0.358  Sum_probs=34.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .++||++.|.|.+. ||+.+++.+..-|.+|+..+|.+.
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence            48999999999855 999999999999999999998753

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.85  E-value=0.15  Score=39.15  Aligned_cols=35  Identities=17%  Similarity=0.220  Sum_probs=29.7

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEec
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELAR-FGASVHTCG   49 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~-~G~~v~~~~   49 (266)
                      .+++||+++|-| .+.+|..+|+.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            468999999886 68899999999975 599988665

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=91.84  E-value=0.39  Score=36.49  Aligned_cols=75  Identities=17%  Similarity=0.052  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|.+||-.|+++|.-.+   .|++.+.+|+.+.++++..+...+.+.. ..++.++..|...-         .. .. ++
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~-~~nv~~~~~d~~~g---------~~-~~-~p  134 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY-YNNIKLILGDGTLG---------YE-EE-KP  134 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT-CSSEEEEESCGGGC---------CG-GG-CC
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc-ccccccccCchhhc---------ch-hh-hh
Confidence            57899999999885443   4566677899999999888766655543 46888888887531         01 11 67


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      .|.++.+++.
T Consensus       135 fD~Iiv~~a~  144 (224)
T d1vbfa_         135 YDRVVVWATA  144 (224)
T ss_dssp             EEEEEESSBB
T ss_pred             HHHHHhhcch
Confidence            9999988775

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.66  E-value=0.089  Score=41.09  Aligned_cols=35  Identities=26%  Similarity=0.367  Sum_probs=31.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEec
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG   49 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~   49 (266)
                      .+++||+++|-| .+.+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            468999999999 68899999999999999988664

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=91.56  E-value=0.12  Score=38.56  Aligned_cols=39  Identities=28%  Similarity=0.314  Sum_probs=34.5

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      ..+.||++.|.|. |.||+.+|+.+..-|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            3588999999997 67999999999999999999987654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.55  E-value=0.085  Score=40.98  Aligned_cols=31  Identities=32%  Similarity=0.290  Sum_probs=27.6

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      |+|.|| |-.|.++|.+|+++|.+|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            777877 7799999999999999999999864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.42  E-value=0.12  Score=38.51  Aligned_cols=40  Identities=23%  Similarity=0.195  Sum_probs=35.0

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      ...+.||++.|.|. |.||+.+|+.+..-|++|+..++...
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            34589999999977 77999999999999999999988654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.27  E-value=1.8  Score=30.98  Aligned_cols=118  Identities=8%  Similarity=0.037  Sum_probs=61.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHC-----CCeEEEecCChhHHHHHHHHHHhc----CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           19 MTALVTGGTRGIGYAIVEELARF-----GASVHTCGRDQNMINERIQEWESK----GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~-----G~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      -.+.|.||++.....+...++.+     +..+++.+.++++++...+.+...    +....+...  +|..   +.+   
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~---eal---   75 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPE---EAF---   75 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHH---HHH---
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChh---hcc---
Confidence            35667777664333344444432     236999999999987655555432    222222111  1211   111   


Q ss_pred             HhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccch----------------hhHHHHHHHHHHHHHhcC-CCeEEE
Q 024551           90 SSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNV----------------ESSYHLCQLAHPLLKASG-NASIVF  152 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~m~~~~-~g~iv~  152 (266)
                           ..-|++|+.+|....      ...+-++.+..|+                .-..-+.+.+.+.+++.. ++-+++
T Consensus        76 -----~~AD~Vvitag~~~~------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~  144 (167)
T d1u8xx1          76 -----TDVDFVMAHIRVGKY------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLN  144 (167)
T ss_dssp             -----SSCSEEEECCCTTHH------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             -----CCCCEEEECCCcCCC------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEE
Confidence                 347999999997532      1122223333332                123345556666666544 556666


Q ss_pred             Eec
Q 024551          153 MSS  155 (266)
Q Consensus       153 vss  155 (266)
                      +|.
T Consensus       145 ~TN  147 (167)
T d1u8xx1         145 YSN  147 (167)
T ss_dssp             CCS
T ss_pred             eCC
Confidence            654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.27  E-value=0.11  Score=39.02  Aligned_cols=39  Identities=26%  Similarity=0.203  Sum_probs=34.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      ..+.||++.|.|. |.||+.+++.+..-|.+|+..++...
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            4588999999998 66999999999999999999998653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.25  E-value=0.2  Score=37.41  Aligned_cols=39  Identities=15%  Similarity=0.040  Sum_probs=31.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERI   59 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~   59 (266)
                      .+.|.| .|-+|..+|..|+++|++|++++.+++..+.+.
T Consensus         2 kI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            356664 577999999999999999999999987655443

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.23  E-value=0.19  Score=38.16  Aligned_cols=38  Identities=18%  Similarity=0.198  Sum_probs=31.8

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      ..-.+|.++|.||+ --|.+.|.+|+++|++|.++.++.
T Consensus        45 ~~~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          45 QTKNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CCSSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cccCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecc
Confidence            34578999999984 568999999999999999987654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.16  E-value=0.74  Score=32.42  Aligned_cols=81  Identities=15%  Similarity=0.112  Sum_probs=52.8

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc------CCeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESK------GFKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      +-+.|- +-+|..+|+.|.+.|+.+ ...|+.++.++..++....      -.....+...+.+.+.+....+.+.... 
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~-   79 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL-   79 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC-
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc-
Confidence            445666 789999999999998765 5677777776666654311      1123344456667778888887777665 


Q ss_pred             CcccEEEecc
Q 024551           95 GKLNILVNNA  104 (266)
Q Consensus        95 ~~id~lv~~a  104 (266)
                      .+-.++|.+.
T Consensus        80 ~~~~~iid~s   89 (156)
T d2cvza2          80 REGTYWVDAT   89 (156)
T ss_dssp             CTTEEEEECS
T ss_pred             cccccccccc
Confidence            3445555444

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.10  E-value=1.6  Score=31.62  Aligned_cols=82  Identities=11%  Similarity=0.041  Sum_probs=56.7

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      .++|+++|=..|++|   ++..+.+.+|+. |+.+..++...+.+.+-+...+  .++.++..|+.      +++.+...
T Consensus        39 ~~~~~~vLDlfaGsG---~~g~ea~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~~  109 (182)
T d2fhpa1          39 YFDGGMALDLYSGSG---GLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFYE  109 (182)
T ss_dssp             CCSSCEEEETTCTTC---HHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHHH
T ss_pred             hcCCCEEEEcccccc---cccceeeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhcc
Confidence            467899886655544   334456778886 9999999998888877776543  36777777764      34444443


Q ss_pred             hcCCcccEEEecccc
Q 024551           92 VFDGKLNILVNNAAL  106 (266)
Q Consensus        92 ~~~~~id~lv~~ag~  106 (266)
                      .. .+.|+++..+.+
T Consensus       110 ~~-~~fDlIflDPPY  123 (182)
T d2fhpa1         110 EK-LQFDLVLLDPPY  123 (182)
T ss_dssp             TT-CCEEEEEECCCG
T ss_pred             cC-CCcceEEechhh
Confidence            32 579999998874

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.10  E-value=0.13  Score=39.85  Aligned_cols=35  Identities=23%  Similarity=0.298  Sum_probs=31.3

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEec
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG   49 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~   49 (266)
                      .+++||+++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            468999999997 68899999999999999998665

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.04  E-value=0.24  Score=38.14  Aligned_cols=35  Identities=26%  Similarity=0.488  Sum_probs=29.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHH-CCCeEEEecC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELAR-FGASVHTCGR   50 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~-~G~~v~~~~r   50 (266)
                      +++||+++|-|- +.+|..+|+.|.+ .|++|+.++-
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            489999999987 6699999999986 4899886543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.01  E-value=0.15  Score=39.08  Aligned_cols=35  Identities=23%  Similarity=0.200  Sum_probs=29.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      ..++|+|.|| |--|..+|..|+++|++|+++.|++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3478899998 5578889999999999999998864

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.01  E-value=0.3  Score=38.69  Aligned_cols=35  Identities=29%  Similarity=0.324  Sum_probs=31.4

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEec
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCG   49 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~   49 (266)
                      .+++||+++|-|- |.+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            4689999999987 7899999999999999998765

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=90.98  E-value=0.39  Score=35.31  Aligned_cols=39  Identities=26%  Similarity=0.438  Sum_probs=34.4

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      ...++++++.|.|. |.||+++++.|..-|.+|+..++..
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            45689999999996 6799999999999999999999854

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=90.92  E-value=1.1  Score=30.85  Aligned_cols=34  Identities=18%  Similarity=0.107  Sum_probs=29.3

Q ss_pred             CCCEEEEecCCC---chHHHHHHHHHHCCCeEEEecC
Q 024551           17 RGMTALVTGGTR---GIGYAIVEELARFGASVHTCGR   50 (266)
Q Consensus        17 ~~k~vlItGas~---giG~aia~~la~~G~~v~~~~r   50 (266)
                      +-|++.|.|+|.   ..|..+.+.|.+.|++++.+--
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~   48 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP   48 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence            578999999994   6899999999999999877643

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.85  E-value=1.5  Score=29.31  Aligned_cols=84  Identities=13%  Similarity=0.071  Sum_probs=48.0

Q ss_pred             CEEEEecCC---CchHHHHHHHHHHCCCeEEEecCChhHHH--HHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           19 MTALVTGGT---RGIGYAIVEELARFGASVHTCGRDQNMIN--ERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        19 k~vlItGas---~giG~aia~~la~~G~~v~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      |++.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+...  .....+.+....+..+. =...++.+.++++++.+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vv-i~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIV-FVVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEE-ECSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEE-EEeCHHHHHHHHHHHHhc-
Confidence            789999999   46899999999999999887765433211  00111111111221111 113455666777776664 


Q ss_pred             CCcccEEEecccc
Q 024551           94 DGKLNILVNNAAL  106 (266)
Q Consensus        94 ~~~id~lv~~ag~  106 (266)
                       + +..++...|.
T Consensus        80 -g-~k~v~~~~g~   90 (116)
T d1y81a1          80 -G-FKKLWFQPGA   90 (116)
T ss_dssp             -T-CCEEEECTTS
T ss_pred             -C-CceEEeccch
Confidence             2 4555555553

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=90.66  E-value=1.2  Score=32.21  Aligned_cols=64  Identities=19%  Similarity=0.107  Sum_probs=51.6

Q ss_pred             HHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEeccc
Q 024551           38 LARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNAA  105 (266)
Q Consensus        38 la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~ag  105 (266)
                      ..++|-+++++..+....+.+.+.|.+.|.++..++.++++.+ -++.++..++   |.+++||..--
T Consensus        27 ~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~e-R~~~l~~F~~---G~~~vLVaT~v   90 (174)
T d1c4oa2          27 RAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFK-RQALIRDLRL---GHYDCLVGINL   90 (174)
T ss_dssp             HHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHH-HHHHHHHHHT---TSCSEEEESCC
T ss_pred             HHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHH-HHHHHHHHHC---CCeEEEEeeee
Confidence            3457899999999999999999999999999999999998543 3445555544   78999998754

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=90.53  E-value=0.56  Score=35.04  Aligned_cols=77  Identities=16%  Similarity=0.081  Sum_probs=57.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      +++||=.||+.|.   .+..|+++|.+|+.++-+++.++...+.+...+ .++.++..|..+..-           ..+.
T Consensus        16 ~~rVLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~-----------~~~~   81 (231)
T d1vl5a_          16 NEEVLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF-----------TDER   81 (231)
T ss_dssp             CCEEEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS-----------CTTC
T ss_pred             cCEEEEecccCcH---HHHHHHHhCCEEEEEECCHHHHhhhhhcccccccccccccccccccccc-----------cccc
Confidence            6889999998884   356788999999999999998887766666554 578899998876420           0257


Q ss_pred             ccEEEecccccc
Q 024551           97 LNILVNNAALVV  108 (266)
Q Consensus        97 id~lv~~ag~~~  108 (266)
                      +|+++......+
T Consensus        82 fD~v~~~~~l~~   93 (231)
T d1vl5a_          82 FHIVTCRIAAHH   93 (231)
T ss_dssp             EEEEEEESCGGG
T ss_pred             cccccccccccc
Confidence            999988766543

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.52  E-value=2  Score=30.36  Aligned_cols=74  Identities=8%  Similarity=-0.100  Sum_probs=40.4

Q ss_pred             EEEEecCCCchHHHHHHH-HHHC-----CCeEEEecCChhHHHHHHHHHHhc-CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           20 TALVTGGTRGIGYAIVEE-LARF-----GASVHTCGRDQNMINERIQEWESK-GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        20 ~vlItGas~giG~aia~~-la~~-----G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+.|.||++ +|...+.. +++.     +..+++.+.++++++...+..+.. .....+ ... ++..+   .+      
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~-~~t-~~~~~---~l------   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV-LIS-DTFEG---AV------   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE-EEC-SSHHH---HH------
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE-EEe-cCccc---cc------
Confidence            467788755 55544432 3321     357999999999887544433322 111211 111 22221   11      


Q ss_pred             cCCcccEEEeccccc
Q 024551           93 FDGKLNILVNNAALV  107 (266)
Q Consensus        93 ~~~~id~lv~~ag~~  107 (266)
                        ..-|++|..+|..
T Consensus        70 --~~aDvVVita~~~   82 (162)
T d1up7a1          70 --VDAKYVIFQFRPG   82 (162)
T ss_dssp             --TTCSEEEECCCTT
T ss_pred             --CCCCEEEEecccC
Confidence              2469999999975

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.42  E-value=1.5  Score=34.18  Aligned_cols=128  Identities=13%  Similarity=0.093  Sum_probs=74.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .|.+||=..|+.| |+.+..+=...+..|+..+.++.+++.+.+.++..+.+...+..+-......         ...+.
T Consensus       102 ~g~~vLD~CAaPG-gKt~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~---------~~~~~  171 (284)
T d1sqga2         102 NGEHILDLCAAPG-GKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW---------CGEQQ  171 (284)
T ss_dssp             TTCEEEEESCTTC-HHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH---------HTTCC
T ss_pred             ccceeEeccCccc-cchhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchh---------ccccc
Confidence            3667776666655 4443322122335799999999999999999988887655555444332221         11256


Q ss_pred             ccEEEeccccccccCCCCCCHHHHH---HHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecC
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYS---SVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSV  156 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~---~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~  156 (266)
                      +|.++.-|.-+..+.+...+.-.|.   +.+.-...-...++..+++.++.  +|++||.+.+
T Consensus       172 fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~--gG~lvYsTCS  232 (284)
T d1sqga2         172 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT--GGTLVYATCS  232 (284)
T ss_dssp             EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE--EEEEEEEESC
T ss_pred             ccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCC--CceEEEeeec
Confidence            8999988876655554432222211   11222233344555555555543  5799997654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=90.21  E-value=0.1  Score=38.99  Aligned_cols=31  Identities=16%  Similarity=0.209  Sum_probs=27.2

Q ss_pred             CEEEEecCCCchHHH-----HHHHHHHCCCeEEEec
Q 024551           19 MTALVTGGTRGIGYA-----IVEELARFGASVHTCG   49 (266)
Q Consensus        19 k~vlItGas~giG~a-----ia~~la~~G~~v~~~~   49 (266)
                      |++.|||.++|.|+.     +|+.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999899985     6788899999998875

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=90.06  E-value=0.92  Score=34.55  Aligned_cols=78  Identities=17%  Similarity=0.117  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +|++||=.||+.|   ..+..+++.|. +|++++.+++.++...+...+.+  .++.+.++|+....-          ..
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~----------~~   90 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM----------DL   90 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC----------CC
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc----------cc
Confidence            6789999998876   23566777775 69999999999988887776543  478899999853311          01


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                      .+.+|+++.+-...
T Consensus        91 ~~~fD~V~~~~~l~  104 (252)
T d1ri5a_          91 GKEFDVISSQFSFH  104 (252)
T ss_dssp             SSCEEEEEEESCGG
T ss_pred             cccceEEEEcceee
Confidence            24689988776554

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=89.98  E-value=0.38  Score=34.48  Aligned_cols=40  Identities=18%  Similarity=0.271  Sum_probs=35.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM   54 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~   54 (266)
                      ..+.||+++|.|= +-+|+.+|.+|...|++|+++..++-.
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            4578999999875 669999999999999999999999854

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.95  E-value=0.14  Score=40.53  Aligned_cols=47  Identities=17%  Similarity=0.121  Sum_probs=38.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG   66 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~   66 (266)
                      .+++||=.||+.|.   ++..|+++|++|+.++.+++.++...+.....+
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~  102 (292)
T d1xvaa_          56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRR  102 (292)
T ss_dssp             TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhcc
Confidence            36789999988874   577788999999999999999887776665543

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=89.94  E-value=1  Score=32.64  Aligned_cols=79  Identities=11%  Similarity=-0.002  Sum_probs=55.8

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .++|+++|=.+|++|   ++..+.+.+|+. |+.+..+.+..+.+.+-+...+ .+..++..|+.         +.+...
T Consensus        41 ~~~~~~vLDlfaGsG---~~giealsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~---------~~l~~~  108 (183)
T d2fpoa1          41 VIVDAQCLDCFAGSG---ALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM---------SFLAQK  108 (183)
T ss_dssp             HHTTCEEEETTCTTC---HHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH---------HHHSSC
T ss_pred             ccchhhhhhhhcccc---ceeeeEEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeeccc---------cccccc
Confidence            467888886666655   456667788975 9999999999988887776543 36677776632         222222


Q ss_pred             cCCcccEEEecccc
Q 024551           93 FDGKLNILVNNAAL  106 (266)
Q Consensus        93 ~~~~id~lv~~ag~  106 (266)
                       ..+.|+++..+.+
T Consensus       109 -~~~fDlIf~DPPY  121 (183)
T d2fpoa1         109 -GTPHNIVFVDPPF  121 (183)
T ss_dssp             -CCCEEEEEECCSS
T ss_pred             -ccccCEEEEcCcc
Confidence             2578999998874

>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At5g11950
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.94  E-value=0.72  Score=33.64  Aligned_cols=11  Identities=0%  Similarity=-0.118  Sum_probs=8.3

Q ss_pred             ccEEEeccccc
Q 024551           97 LNILVNNAALV  107 (266)
Q Consensus        97 id~lv~~ag~~  107 (266)
                      =|.+|..+|..
T Consensus        99 sdafIvlPGG~  109 (181)
T d1ydhb_          99 AEAFIALPGGY  109 (181)
T ss_dssp             CSEEEECSCSH
T ss_pred             CeeEEEeCCcc
Confidence            48888888864

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.83  E-value=0.16  Score=40.06  Aligned_cols=35  Identities=17%  Similarity=0.170  Sum_probs=29.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      +.|.|+|.||+ --|.+.|..|+++|++|+++.++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34789999984 568899999999999999998754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.63  E-value=0.35  Score=35.52  Aligned_cols=40  Identities=28%  Similarity=0.251  Sum_probs=34.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhH
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNM   54 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~   54 (266)
                      ..+.||++.|.|. +.||+.+++.+..-|.+|+..++....
T Consensus        40 ~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          40 TEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            4578999999995 889999999999999999999987653

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.35  E-value=0.2  Score=40.12  Aligned_cols=36  Identities=25%  Similarity=0.326  Sum_probs=29.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      +.|.++|.|| |--|..+|..|+++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4689999998 45688899999999999999877553

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.23  E-value=0.13  Score=34.16  Aligned_cols=39  Identities=18%  Similarity=0.117  Sum_probs=31.6

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      ...++||+|+|.|++ .-|.-+|..|++.+.+++...|+.
T Consensus        27 ~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          27 PELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            346899999999985 567789999999888877776654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.09  E-value=0.72  Score=30.79  Aligned_cols=34  Identities=21%  Similarity=0.226  Sum_probs=26.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHH---CCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELAR---FGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~---~G~~v~~~~r~~   52 (266)
                      .|.++|.|| |.+|..+|..|.+   +|.+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            578999988 8899999976655   456788887643

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.02  E-value=0.67  Score=36.88  Aligned_cols=76  Identities=16%  Similarity=0.079  Sum_probs=52.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHh
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSS   91 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   91 (266)
                      ..+||+||-.|++.|+   ++..+++.|+ +|+.++.++. .....+.....  ..++.++..|+.+.+.          
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence            3589999999998885   5667788886 4888887754 34444444443  4568899988876431          


Q ss_pred             hcCCcccEEEeccc
Q 024551           92 VFDGKLNILVNNAA  105 (266)
Q Consensus        92 ~~~~~id~lv~~ag  105 (266)
                       ...++|+++....
T Consensus        97 -~~~~~D~ivs~~~  109 (316)
T d1oria_          97 -PVEKVDIIISEWM  109 (316)
T ss_dssp             -SSSCEEEEEECCC
T ss_pred             -ccceeEEEeeeee
Confidence             1157899887543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=88.95  E-value=0.37  Score=35.63  Aligned_cols=39  Identities=18%  Similarity=0.173  Sum_probs=34.2

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      ..++||++.|.|. |.||+.+++.+...|.+|+..++...
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            4678999999987 67999999999999999999887554

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.81  E-value=0.26  Score=35.11  Aligned_cols=35  Identities=17%  Similarity=0.181  Sum_probs=28.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCC--eEEEecCCh
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGA--SVHTCGRDQ   52 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~--~v~~~~r~~   52 (266)
                      .||+++|.|| |-.|..+|..|.+++.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999998 5579999999999884  678877655

>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein YvdD
species: Bacillus subtilis [TaxId: 1423]

Probab=88.76  E-value=3.1  Score=29.95  Aligned_cols=89  Identities=11%  Similarity=0.035  Sum_probs=49.0

Q ss_pred             CEEEEecCCC--------chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHH---------
Q 024551           19 MTALVTGGTR--------GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQ---------   81 (266)
Q Consensus        19 k~vlItGas~--------giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~---------   81 (266)
                      |+|.|.|+++        -..+.+++.|+++|+.++--+-..---....+...+.++++..+........+         
T Consensus         2 k~v~VF~~s~~~~~~~~~~~a~~lg~~la~~g~~lv~GGG~~GlMga~a~ga~~~gg~v~gv~~~~l~~~~~~~~~~~~~   81 (179)
T d1t35a_           2 KTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTEL   81 (179)
T ss_dssp             CEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSEE
T ss_pred             CEEEEEccCCCCcCCHHHHHHHHHHHHHHHCCCeEEECCCchHHHHHHhcchhhcCCceeccccchhhccccccccceee
Confidence            4566666664        34566777777777777766655555555566666666655544433222111         


Q ss_pred             --HHHHHHHHHhhcCCcccEEEecccccc
Q 024551           82 --REKLIETVSSVFDGKLNILVNNAALVV  108 (266)
Q Consensus        82 --i~~~~~~~~~~~~~~id~lv~~ag~~~  108 (266)
                        ...+.++-.... ..-|.+|-.+|...
T Consensus        82 ~~~~~~~~Rk~~m~-~~sdafI~lPGG~G  109 (179)
T d1t35a_          82 IEVNGMHERKAKMS-ELADGFISMPGGFG  109 (179)
T ss_dssp             EEESHHHHHHHHHH-HHCSEEEECSCCHH
T ss_pred             eeeccHHHHHHHHH-HhcCeEEEecCccc
Confidence              122333322222 23488888888653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.67  E-value=0.2  Score=38.88  Aligned_cols=30  Identities=23%  Similarity=0.269  Sum_probs=26.2

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCC
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRD   51 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~   51 (266)
                      |+|.|| |-.|.++|.+|+++|.+|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            677776 678999999999999999999874

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=88.58  E-value=0.43  Score=34.22  Aligned_cols=83  Identities=7%  Similarity=0.159  Sum_probs=52.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-CCeEE-EecCChhH-HHHHHHHH--------------HhcCCeeEEEeccCCCHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARF-GASVH-TCGRDQNM-INERIQEW--------------ESKGFKVTGSVCDLSFGDQR   82 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~-G~~v~-~~~r~~~~-~~~~~~~l--------------~~~~~~~~~~~~D~~~~~~i   82 (266)
                      ++.|.|++|.+|+++++...+. ++.++ .++|.... ......++              ...-..+. +..|++.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHHH
Confidence            6899999999999999998775 56654 44443211 00000000              00001111 34799999999


Q ss_pred             HHHHHHHHhhcCCcccEEEecccc
Q 024551           83 EKLIETVSSVFDGKLNILVNNAAL  106 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~  106 (266)
                      ...++.+.+.   ++.+|+-..|.
T Consensus        85 ~~~~~~a~~~---~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQH---GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHT---TCEEEECCCCC
T ss_pred             HHHHHHHHhc---cceeEEecCCC
Confidence            9999887774   47888877775

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=88.51  E-value=0.19  Score=39.10  Aligned_cols=40  Identities=23%  Similarity=0.286  Sum_probs=33.2

Q ss_pred             ccCCCCEEEEecCCCchHHHH-----HHHHHHCCCeEEEecCChh
Q 024551           14 WSLRGMTALVTGGTRGIGYAI-----VEELARFGASVHTCGRDQN   53 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~ai-----a~~la~~G~~v~~~~r~~~   53 (266)
                      +.-.++.++|+.|=||.|+.+     |..|+++|.+|++++-+++
T Consensus        15 ~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          15 IARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             HHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             hhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            334678888888899999986     7889999999999998865

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.14  E-value=0.96  Score=36.08  Aligned_cols=75  Identities=20%  Similarity=0.113  Sum_probs=51.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCC-eEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .+||+||-.|++.|+   ++..++++|+ +|+.+..++ .++...+.....  ..++.++..|+.+..           .
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~-----------~  101 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH-----------L  101 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-----------C
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc-----------C
Confidence            589999999998884   4667788897 588888775 444444444444  357888998887642           1


Q ss_pred             cCCcccEEEeccc
Q 024551           93 FDGKLNILVNNAA  105 (266)
Q Consensus        93 ~~~~id~lv~~ag  105 (266)
                      ...++|+++...-
T Consensus       102 ~~~~~D~i~se~~  114 (328)
T d1g6q1_         102 PFPKVDIIISEWM  114 (328)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             cccceeEEEEEec
Confidence            1246898887543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.00  E-value=0.29  Score=42.27  Aligned_cols=35  Identities=14%  Similarity=0.187  Sum_probs=29.0

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCe-EEEecC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGAS-VHTCGR   50 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~-v~~~~r   50 (266)
                      .+++.+|+|.|+ +|+|..+++.|+..|.. +.+++.
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            456789999997 78999999999999965 667654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=87.79  E-value=3.4  Score=29.38  Aligned_cols=76  Identities=14%  Similarity=0.143  Sum_probs=43.7

Q ss_pred             EEEEecCCC-chHHHHHHHHHHC----CCeEEEecCChhHHHHHHHHHHh----cCCeeEEEeccCCCHHHHHHHHHHHH
Q 024551           20 TALVTGGTR-GIGYAIVEELARF----GASVHTCGRDQNMINERIQEWES----KGFKVTGSVCDLSFGDQREKLIETVS   90 (266)
Q Consensus        20 ~vlItGas~-giG~aia~~la~~----G~~v~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~i~~~~~~~~   90 (266)
                      .+.|.||++ |...++...++..    +..++++++++++++.....+..    .+....+..  .+|.++   .+    
T Consensus         4 KI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td~~e---aL----   74 (171)
T d1obba1           4 KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMNLDD---VI----   74 (171)
T ss_dssp             EEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESCHHH---HH----
T ss_pred             EEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCChhh---cc----
Confidence            566777633 3444555556543    35899999999988765555443    222322211  122222   22    


Q ss_pred             hhcCCcccEEEecccccc
Q 024551           91 SVFDGKLNILVNNAALVV  108 (266)
Q Consensus        91 ~~~~~~id~lv~~ag~~~  108 (266)
                          ...|++|+.++...
T Consensus        75 ----~dad~Vv~~~~~g~   88 (171)
T d1obba1          75 ----IDADFVINTAMVGG   88 (171)
T ss_dssp             ----TTCSEEEECCCTTH
T ss_pred             ----cCCCeEeeeccccc
Confidence                24799999988653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=87.76  E-value=2.3  Score=27.26  Aligned_cols=71  Identities=18%  Similarity=0.150  Sum_probs=46.1

Q ss_pred             CCCEEEEecCCCchH-HHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIG-YAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG-~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      +.|.+-+.|-. |+| .++|+.|.++|+.|...++....   ..+.+.+.|..+..  .+-  ++           .. .
T Consensus         7 ~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~---~~~~L~~~Gi~v~~--g~~--~~-----------~i-~   66 (96)
T d1p3da1           7 RVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGV---VTQRLAQAGAKIYI--GHA--EE-----------HI-E   66 (96)
T ss_dssp             TCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSH---HHHHHHHTTCEEEE--SCC--GG-----------GG-T
T ss_pred             hCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCCh---hhhHHHHCCCeEEE--CCc--cc-----------cC-C
Confidence            46778888753 344 56799999999999999987543   33445555554432  111  11           11 3


Q ss_pred             cccEEEeccccc
Q 024551           96 KLNILVNNAALV  107 (266)
Q Consensus        96 ~id~lv~~ag~~  107 (266)
                      ..|.+|...++.
T Consensus        67 ~~d~vV~S~AI~   78 (96)
T d1p3da1          67 GASVVVVSSAIK   78 (96)
T ss_dssp             TCSEEEECTTSC
T ss_pred             CCCEEEECCCcC
Confidence            579999999875

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=87.59  E-value=0.97  Score=33.89  Aligned_cols=76  Identities=13%  Similarity=0.042  Sum_probs=56.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC-CeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG-FKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      .|++||=.||+.|   .++..|++++.+|+.++-+++.++...+.+...+ .++.+++.|..+.. ..          .+
T Consensus        16 ~~~rILDiGcGtG---~~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-~~----------~~   81 (234)
T d1xxla_          16 AEHRVLDIGAGAG---HTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FP----------DD   81 (234)
T ss_dssp             TTCEEEEESCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SC----------TT
T ss_pred             CCCEEEEeCCcCc---HHHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-cc----------cc
Confidence            4778999998888   4566778889999999999998887777776654 46889999887532 00          15


Q ss_pred             cccEEEecccc
Q 024551           96 KLNILVNNAAL  106 (266)
Q Consensus        96 ~id~lv~~ag~  106 (266)
                      .+|+++.+-.+
T Consensus        82 ~fD~v~~~~~l   92 (234)
T d1xxla_          82 SFDIITCRYAA   92 (234)
T ss_dssp             CEEEEEEESCG
T ss_pred             ccceeeeecee
Confidence            78988776554

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=87.52  E-value=0.72  Score=35.98  Aligned_cols=76  Identities=13%  Similarity=0.094  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHH---CCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELAR---FGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~---~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      +.++||=.|++.|   ..+..|++   .|++|+.++.+++.++...+.+...+.++.+...|+.+..            +
T Consensus        27 ~~~~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~------------~   91 (281)
T d2gh1a1          27 KPVHIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE------------L   91 (281)
T ss_dssp             SCCEEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCC------------C
T ss_pred             CcCEEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccccc------------c
Confidence            5678998998776   34445554   5789999999999998888888777778999999987542            1


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                      .+++|+++.+....
T Consensus        92 ~~~fD~v~~~~~l~  105 (281)
T d2gh1a1          92 NDKYDIAICHAFLL  105 (281)
T ss_dssp             SSCEEEEEEESCGG
T ss_pred             cCCceEEEEehhhh
Confidence            24689988876543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.39  E-value=1.4  Score=33.07  Aligned_cols=80  Identities=14%  Similarity=0.045  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHH-CC----CeEEEecCChhHHHHHHHHHHhc------CCeeEEEeccCCCHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELAR-FG----ASVHTCGRDQNMINERIQEWESK------GFKVTGSVCDLSFGDQREKL   85 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~-~G----~~v~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~D~~~~~~i~~~   85 (266)
                      .|.+||..|+++|.-.++.-+++. .|    .+|+.+.++++..+...+.+...      -.++.++..|..+-.     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            578999999999988887777664 45    47999999998776665544321      247888888875311     


Q ss_pred             HHHHHhhcCCcccEEEeccccc
Q 024551           86 IETVSSVFDGKLNILVNNAALV  107 (266)
Q Consensus        86 ~~~~~~~~~~~id~lv~~ag~~  107 (266)
                           ... ++.|.++.+++..
T Consensus       155 -----~~~-~~fD~Iiv~~a~~  170 (223)
T d1r18a_         155 -----PPN-APYNAIHVGAAAP  170 (223)
T ss_dssp             -----GGG-CSEEEEEECSCBS
T ss_pred             -----ccc-cceeeEEEEeech
Confidence                 111 6799999988854

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.22  E-value=0.29  Score=38.39  Aligned_cols=32  Identities=16%  Similarity=0.304  Sum_probs=26.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCC-eEEEecCCh
Q 024551           20 TALVTGGTRGIGYAIVEELARFGA-SVHTCGRDQ   52 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~-~v~~~~r~~   52 (266)
                      .|+|.|| |-+|.++|.+|+++|. +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            3778887 5799999999999996 599998753

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.21  E-value=3.5  Score=28.84  Aligned_cols=83  Identities=14%  Similarity=0.203  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccC---CCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDL---SFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~---~~~~~i~~~~~~~~~~~   93 (266)
                      +|+++.|.+.|+|.|--++-.+.+.|.++.  .-+++..+++.+.+....  ..--++|+   .+.+...++++.+.+. 
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~~L~~~lp~~~--~~~NPlD~~~~~~~~~~~~~l~~~~~d-   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIEELRSFLPPMA--AVKNPVDMIASARGEDYYRTAKLLLQD-   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHHHHHHHSCTTC--EESSEEECCTTCCHHHHHHHHHHHHHS-
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHHHHHHhCCCcc--cCCCcccccCCCCHHHHHHHHHHHHcC-
Confidence            689999999999999999999999996664  334555555555443221  11113344   3456667777766664 


Q ss_pred             CCcccEEEeccc
Q 024551           94 DGKLNILVNNAA  105 (266)
Q Consensus        94 ~~~id~lv~~ag  105 (266)
                       +.+|.++....
T Consensus        77 -~~vd~v~v~~~   87 (163)
T d2csua3          77 -PNVDMLIAICV   87 (163)
T ss_dssp             -TTCSEEEEEEE
T ss_pred             -CCcCEEEEeec
Confidence             56887765443

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=87.04  E-value=2.1  Score=31.04  Aligned_cols=106  Identities=11%  Similarity=0.131  Sum_probs=56.5

Q ss_pred             CCCCEEEEecCCC-------------chHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHH
Q 024551           16 LRGMTALVTGGTR-------------GIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQR   82 (266)
Q Consensus        16 ~~~k~vlItGas~-------------giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i   82 (266)
                      +++|++++.|=|-             |-+.-+++.|-.++.+|+=.+..-.......+.                     
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~---------------------   59 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND---------------------   59 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS---------------------
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh---------------------
Confidence            4689999999773             234455555555667776555544332221110                     


Q ss_pred             HHHHHHHHhhcCCcccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecC
Q 024551           83 EKLIETVSSVFDGKLNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSV  156 (266)
Q Consensus        83 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~  156 (266)
                       ....++.... .+.|++|.+.|..........+.+++.+.           ++.++..+++. ...+|.++..
T Consensus        60 -~~~~~~~~~~-~~~D~vvi~~G~ND~~~~~~~~~~~~~~~-----------l~~li~~~~~~-~~~~vl~~~~  119 (208)
T d2o14a2          60 -GQLEAILKYI-KPGDYFMLQLGINDTNPKHKESEAEFKEV-----------MRDMIRQVKAK-GADVILSTPQ  119 (208)
T ss_dssp             -SHHHHHHTTC-CTTCEEEEECCTGGGCGGGCCCHHHHHHH-----------HHHHHHHHHTT-TCEEEEECCC
T ss_pred             -hhHHHHHHhc-CCCCEEEEEcCCCcccccccccHHHHHHH-----------HHHHHHHHHhc-CCceeecccc
Confidence             0222333333 46799999999775433333455543332           23334444554 4567777643

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.00  E-value=0.31  Score=36.26  Aligned_cols=31  Identities=16%  Similarity=0.111  Sum_probs=26.5

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      |+|.|| |--|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            677875 6678899999999999999998864

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=86.44  E-value=2.3  Score=29.82  Aligned_cols=48  Identities=13%  Similarity=0.135  Sum_probs=32.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHC--CCeEEEe--cCChhHHHHHHHHHHhcCCee
Q 024551           19 MTALVTGGTRGIGYAIVEELARF--GASVHTC--GRDQNMINERIQEWESKGFKV   69 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~--G~~v~~~--~r~~~~~~~~~~~l~~~~~~~   69 (266)
                      |++.|.|+||.||.....-+.+.  .++|+.+  .++-+.+.   +++.+...+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~---~q~~~f~pk~   53 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMV---EQCLEFSPRY   53 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHH---HHHHHHCCSE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHH---HHHHHHhhcc
Confidence            57999999999999988887776  4677643  34454444   4444444443

>d1a9xa2 c.24.1.1 (A:936-1073) Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Methylglyoxal synthase-like
superfamily: Methylglyoxal synthase-like
family: Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
domain: Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.39  E-value=0.82  Score=31.75  Aligned_cols=113  Identities=8%  Similarity=0.006  Sum_probs=66.8

Q ss_pred             CEEEEecCC--CchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           19 MTALVTGGT--RGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        19 k~vlItGas--~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      ..|+|+=.-  .--...+|+.|.+.|++++.+.       -+++.|.+.|..+..+.-.-.....   +.+.+++   +.
T Consensus         8 G~v~iSv~d~dK~~~~~~ak~l~~lGf~i~AT~-------GTa~~L~~~Gi~~~~v~ki~~~~p~---i~d~i~~---gk   74 (138)
T d1a9xa2           8 GRALLSVREGDKERVVDLAAKLLKQGFELDATH-------GTAIVLGEAGINPRLVNKVHEGRPH---IQDRIKN---GE   74 (138)
T ss_dssp             SEEEEECCGGGGTTHHHHHHHHHHTTCEEEECH-------HHHHHHHTTTCCCEECBCTTTCSSB---HHHHHHH---TC
T ss_pred             CEEEEEEehhhhhHHHHHHHHHHHCCCEEEecC-------chHHHHHHhcccccccccccccccc---HhHHHhc---CC
Confidence            456665432  3556689999999999999874       3556777777666654322222222   3333333   78


Q ss_pred             ccEEEeccccccccCCCCCCHHHHHHHhccchhhHHHHHHHHHHHHHhc
Q 024551           97 LNILVNNAALVVMKRATEYTLEEYSSVMSTNVESSYHLCQLAHPLLKAS  145 (266)
Q Consensus        97 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~  145 (266)
                      +|.+||...... ...+.......--.+.+-+...+..+++++..|+..
T Consensus        75 idlVINt~~~~~-~~~dg~~IRR~Av~~~IP~~T~l~~A~a~i~al~~~  122 (138)
T d1a9xa2          75 YTYIINTTSGRR-AIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNAD  122 (138)
T ss_dssp             CSEEEECCCSHH-HHHHTHHHHHHHHHTTCEEESSHHHHHHHHHHHTCC
T ss_pred             eEEEEECCCCCc-ccccHHHHHHHHHHcCCCEEecHHHHHHHHHHHHhC
Confidence            999999754221 111122223334456666777777777777777543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.24  E-value=1.5  Score=28.92  Aligned_cols=34  Identities=24%  Similarity=0.223  Sum_probs=26.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHH---CCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELAR---FGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~---~G~~v~~~~r~~   52 (266)
                      .|.++|.|| |.+|-.+|..|++   .|.+|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            578999988 6789999876654   488898887743

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.21  E-value=1.6  Score=35.27  Aligned_cols=54  Identities=9%  Similarity=0.102  Sum_probs=36.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEE
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGS   72 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~   72 (266)
                      ....+|+..+|.-|.++|..-+..|.+++++...... +...+.++..|.++..+
T Consensus        96 ~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~-~~k~~~i~~~GA~vv~v  149 (355)
T d1jbqa_          96 PGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMS-SEKVDVLRALGAEIVRT  149 (355)
T ss_dssp             TTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCC-HHHHHHHHHTTCEEEEC
T ss_pred             cCceEEEecccchhhHHHHHHHhccCCeEEEeeccch-HHHHHHHHhcCCeEEEe
Confidence            3467888899999999999999999986655432211 23334455556665543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=86.08  E-value=0.62  Score=34.15  Aligned_cols=40  Identities=18%  Similarity=0.146  Sum_probs=34.5

Q ss_pred             cccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           13 KWSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        13 ~~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      ...+++|++.|.|. |.||+.+++.+..-|.+|+..++...
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          39 SFEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceEEEEeec-ccchhhhhhhcccccceEeecccccc
Confidence            34689999999965 78999999999999999999988643

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=86.05  E-value=2.2  Score=32.08  Aligned_cols=76  Identities=17%  Similarity=0.061  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHH-CCCeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELAR-FGASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~-~G~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .|++||=.||+.|   .++..+++ .|++|+.++-++..++...+.....+  .++.+...|+.+...            
T Consensus        33 pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~~------------   97 (245)
T d1nkva_          33 PGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA------------   97 (245)
T ss_dssp             TTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC------------
T ss_pred             CCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhccc------------
Confidence            4789998998777   34555655 48999999999988877766665554  468999999875311            


Q ss_pred             CCcccEEEeccccc
Q 024551           94 DGKLNILVNNAALV  107 (266)
Q Consensus        94 ~~~id~lv~~ag~~  107 (266)
                      ++++|.++..-...
T Consensus        98 ~~~fD~v~~~~~~~  111 (245)
T d1nkva_          98 NEKCDVAACVGATW  111 (245)
T ss_dssp             SSCEEEEEEESCGG
T ss_pred             cCceeEEEEEehhh
Confidence            26799888765544

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.05  E-value=0.34  Score=36.36  Aligned_cols=34  Identities=24%  Similarity=0.341  Sum_probs=29.1

Q ss_pred             CCEEEEecCCCchHHH-----HHHHHHHCCCeEEEecCC
Q 024551           18 GMTALVTGGTRGIGYA-----IVEELARFGASVHTCGRD   51 (266)
Q Consensus        18 ~k~vlItGas~giG~a-----ia~~la~~G~~v~~~~r~   51 (266)
                      +|++.|+|+-||.|+.     +|..|+++|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6899999999999886     567788999999998855

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.80  E-value=3.2  Score=30.84  Aligned_cols=78  Identities=12%  Similarity=0.042  Sum_probs=53.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhc-
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVF-   93 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-   93 (266)
                      .+|+.||=.|++.|+   .+..+++++ .+|++++.++..++...+...+.+..+..+..|..          .....+ 
T Consensus        52 ~~g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~----------~~~~~~~  118 (229)
T d1zx0a1          52 SKGGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWE----------DVAPTLP  118 (229)
T ss_dssp             TTCEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHH----------HHGGGSC
T ss_pred             cCCCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhccccccccccccc----------ccccccc
Confidence            478899999998884   566777765 67999999999888777776666666766665521          111111 


Q ss_pred             CCcccEEEecccc
Q 024551           94 DGKLNILVNNAAL  106 (266)
Q Consensus        94 ~~~id~lv~~ag~  106 (266)
                      .+++|.++..+-.
T Consensus       119 ~~~fD~i~fD~~~  131 (229)
T d1zx0a1         119 DGHFDGILYDTYP  131 (229)
T ss_dssp             TTCEEEEEECCCC
T ss_pred             cccccceeecccc
Confidence            2578988765543

>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: NOL1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.98  E-value=5.9  Score=30.77  Aligned_cols=128  Identities=7%  Similarity=0.020  Sum_probs=68.0

Q ss_pred             CCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRG-IGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~g-iG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .|.+||=..|+.| -...++ ++...+..|+..+.++.+++.+.+.++..+. ++.+...|..+....       ...+ 
T Consensus        94 ~g~~vLD~cAapGgKt~~la-~l~~~~~~i~a~d~~~~R~~~l~~~l~r~g~~~~~~~~~d~~~~~~~-------~~~~-  164 (293)
T d2b9ea1          94 PGSHVIDACAAPGNKTSHLA-ALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPS-------DPRY-  164 (293)
T ss_dssp             TTCEEEESSCTTCHHHHHHH-HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTT-------CGGG-
T ss_pred             ccceEEecccchhhHHHHHH-HHhcCCceEeeecCCHHHHHHHHHHHHhcCccceeeeehhhhhhccc-------cccc-
Confidence            3667776666655 233333 3455567899999999999999998888764 566767776533210       1122 


Q ss_pred             CcccEEEeccccccccCCCCCCHHHHHHH---hccchhhHH--HHHHHHHHHHHhcCCCeEEEEecC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEYSSV---MSTNVESSY--HLCQLAHPLLKASGNASIVFMSSV  156 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~---~~~n~~~~~--~l~~~~~~~m~~~~~g~iv~vss~  156 (266)
                      +++|.++.-|.-+..+.+.......|...   .+.+-+...  .+.+.++   .-...|++||.+-+
T Consensus       165 ~~fD~VL~DaPCSg~G~~~r~p~~~~~~~~~~~~~~~l~~~Q~~il~~a~---~l~~gG~lvYsTCS  228 (293)
T d2b9ea1         165 HEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHAL---TFPSLQRLVYSTCS  228 (293)
T ss_dssp             TTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHT---TCTTCCEEEEEESC
T ss_pred             ceeeEEeecCcccchhhhcccchhhccCCcchhhHHHHhhhhHHhHHHhh---hcccccEEEEeecc
Confidence            56899999887665554433222222221   122222222  2223332   22346899997654

>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Bacillus caldotenax [TaxId: 1395]

Probab=84.89  E-value=4.3  Score=29.16  Aligned_cols=63  Identities=16%  Similarity=0.176  Sum_probs=51.0

Q ss_pred             HHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcccEEEecc
Q 024551           38 LARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLNILVNNA  104 (266)
Q Consensus        38 la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id~lv~~a  104 (266)
                      ..+++.+++++..+....+.+.+.+...|..+..+..|++..+ -.+.++..++   |.+++||..-
T Consensus        27 ~~~~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~e-R~~~l~~Fr~---g~~~vLVaTd   89 (181)
T d1t5la2          27 RVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLE-RIEIIRDLRL---GKYDVLVGIN   89 (181)
T ss_dssp             HHHTTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHH-HHHHHHHHHH---TSCSEEEESC
T ss_pred             HHhcCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHH-HHHHHHHHHC---CCCCEEEehh
Confidence            3457889999999999999999999999999999999988554 4555555555   7899999874

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=84.63  E-value=3.2  Score=32.51  Aligned_cols=57  Identities=11%  Similarity=-0.055  Sum_probs=36.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCC
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLS   77 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~   77 (266)
                      ..+|+..++..|.++|..-+..|.+++++...... ....+.++..|.++..+.-+..
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~k~~~l~~~Ga~vi~~~~~~~  126 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAP-EAKVAATKGYGGQVIMYDRYKD  126 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCC-HHHHHHHHHTTCEEEEECTTTT
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeeccccccc-HHHHHHHHHcCCcEEeccCCch
Confidence            34788889999999999999999886554432211 2334445566666665544333

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.34  E-value=2.2  Score=31.57  Aligned_cols=80  Identities=10%  Similarity=0.126  Sum_probs=54.2

Q ss_pred             ccC-CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           14 WSL-RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        14 ~~~-~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      +.+ .|.+||=.||++|.-......+...| +|+.++.+++.++.+.+..+.. .++.++..|..++......       
T Consensus        52 l~lkpg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~-------  122 (209)
T d1nt2a_          52 LKLRGDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGI-------  122 (209)
T ss_dssp             CCCCSSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTT-------
T ss_pred             CCCCCCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCccccccc-------
Confidence            344 48899999998885333233333344 8999999999998887776654 4788888998876552211       


Q ss_pred             cCCcccEEEec
Q 024551           93 FDGKLNILVNN  103 (266)
Q Consensus        93 ~~~~id~lv~~  103 (266)
                      + ..+|++++.
T Consensus       123 ~-~~vd~v~~~  132 (209)
T d1nt2a_         123 V-EKVDLIYQD  132 (209)
T ss_dssp             C-CCEEEEEEC
T ss_pred             c-ceEEEEEec
Confidence            1 356776654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=84.19  E-value=1.2  Score=31.26  Aligned_cols=50  Identities=20%  Similarity=0.165  Sum_probs=34.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHC--CCeEEEec--CChhHHHHHHHHHHhcCCeeE
Q 024551           18 GMTALVTGGTRGIGYAIVEELARF--GASVHTCG--RDQNMINERIQEWESKGFKVT   70 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~--G~~v~~~~--r~~~~~~~~~~~l~~~~~~~~   70 (266)
                      -|++.|.|+||-||.....-+.+.  .++|+.++  +|-+   .+.+++++......
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~---~L~~q~~ef~Pk~v   55 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVK---DLADAAKRTNAKRA   55 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHH---HHHHHHHHTTCSEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHH---HHHHHHHhhccccc
Confidence            489999999999999988887765  47776443  3444   44555555544443

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=84.15  E-value=0.9  Score=33.95  Aligned_cols=70  Identities=11%  Similarity=0.084  Sum_probs=51.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCC
Q 024551           16 LRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDG   95 (266)
Q Consensus        16 ~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   95 (266)
                      ++++.||=.||+.|   .+++.|+++|.+|++++.+++.++...+..   ..++.++..|+.+..            .++
T Consensus        19 ~~~~~VLDiGcG~G---~~~~~l~~~g~~v~giD~s~~~i~~a~~~~---~~~~~~~~~~~~~~~------------~~~   80 (225)
T d2p7ia1          19 FRPGNLLELGSFKG---DFTSRLQEHFNDITCVEASEEAISHAQGRL---KDGITYIHSRFEDAQ------------LPR   80 (225)
T ss_dssp             CCSSCEEEESCTTS---HHHHHHTTTCSCEEEEESCHHHHHHHHHHS---CSCEEEEESCGGGCC------------CSS
T ss_pred             CCCCcEEEEeCCCc---HHHHHHHHcCCeEEEEeCcHHHhhhhhccc---ccccccccccccccc------------ccc
Confidence            57889999998887   356788899999999999998876665443   345778887765431            125


Q ss_pred             cccEEEec
Q 024551           96 KLNILVNN  103 (266)
Q Consensus        96 ~id~lv~~  103 (266)
                      ++|+++..
T Consensus        81 ~fD~I~~~   88 (225)
T d2p7ia1          81 RYDNIVLT   88 (225)
T ss_dssp             CEEEEEEE
T ss_pred             cccccccc
Confidence            78988864

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.90  E-value=0.44  Score=36.97  Aligned_cols=33  Identities=15%  Similarity=0.157  Sum_probs=28.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      .|+|.||+ -.|..+|..|+++|.+|+++.++++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            47888885 7899999999999999999998764

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.86  E-value=2.1  Score=32.63  Aligned_cols=84  Identities=12%  Similarity=0.004  Sum_probs=56.0

Q ss_pred             CCEEEEec-CCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           18 GMTALVTG-GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        18 ~k~vlItG-as~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      ...+|=.| |+|.|+..++.++-  +++++.++.+++.++-..+-+...+  .++.++..|..+.     +...+.+...
T Consensus        62 ~~~~LDiGtGsg~I~~~l~~~~~--~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~-----~~~~~~~~~~  134 (250)
T d2h00a1          62 LRRGIDIGTGASCIYPLLGATLN--GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL-----LMDALKEESE  134 (250)
T ss_dssp             CCEEEEESCTTTTHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS-----STTTSTTCCS
T ss_pred             cceEEEeCCCchHHHHHHHHhCC--CccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHh-----hhhhhhhccc
Confidence            34667677 55678888888763  6899999999999988777776653  4666666544321     1111111112


Q ss_pred             CcccEEEecccccc
Q 024551           95 GKLNILVNNAALVV  108 (266)
Q Consensus        95 ~~id~lv~~ag~~~  108 (266)
                      +++|++|.|+.+..
T Consensus       135 ~~fD~ivsNPPY~~  148 (250)
T d2h00a1         135 IIYDFCMCNPPFFA  148 (250)
T ss_dssp             CCBSEEEECCCCC-
T ss_pred             CceeEEEecCcccc
Confidence            57999999999874

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=83.82  E-value=2.2  Score=32.87  Aligned_cols=76  Identities=16%  Similarity=0.043  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHC-CCeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARF-GASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .|.+||=.||+.|.   ++..|+++ |++|+.++-++..++...+.....+  .++.++.+|..+..-           .
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~-----------~  132 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC-----------E  132 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS-----------C
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc-----------c
Confidence            57899999987762   45556654 8899999999988877776666543  479999999876320           0


Q ss_pred             CCcccEEEecccc
Q 024551           94 DGKLNILVNNAAL  106 (266)
Q Consensus        94 ~~~id~lv~~ag~  106 (266)
                      .+.+|+++..-..
T Consensus       133 ~~sfD~V~~~~~l  145 (282)
T d2o57a1         133 DNSYDFIWSQDAF  145 (282)
T ss_dssp             TTCEEEEEEESCG
T ss_pred             ccccchhhccchh
Confidence            2579999876544

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.78  E-value=6.8  Score=30.74  Aligned_cols=127  Identities=12%  Similarity=0.066  Sum_probs=73.2

Q ss_pred             CCCEEEEecCCCchHHHHHH-HHHHCCCeEEEecCChhHHHHHHHHHHhcCC-eeEEEeccCCCHHHHHHHHHHHHhhcC
Q 024551           17 RGMTALVTGGTRGIGYAIVE-ELARFGASVHTCGRDQNMINERIQEWESKGF-KVTGSVCDLSFGDQREKLIETVSSVFD   94 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~-~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~   94 (266)
                      .|.+|+=..|+.| |+.+.. ++......++..+.++.+++.+.+.+...+. ++..+..|.....           ...
T Consensus       116 ~g~~vlD~CAapG-gKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~-----------~~~  183 (313)
T d1ixka_         116 PGEIVADMAAAPG-GKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG-----------ELN  183 (313)
T ss_dssp             TTCEEEECCSSCS-HHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG-----------GGC
T ss_pred             ccceeeecccchh-hhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccc-----------ccc
Confidence            4667776666665 444332 3444556789999999999999888887654 4555555543322           112


Q ss_pred             CcccEEEeccccccccCCCCCCHHHH---HHHhccchhhHHHHHHHHHHHHHhcCCCeEEEEecCC
Q 024551           95 GKLNILVNNAALVVMKRATEYTLEEY---SSVMSTNVESSYHLCQLAHPLLKASGNASIVFMSSVA  157 (266)
Q Consensus        95 ~~id~lv~~ag~~~~~~~~~~~~~~~---~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~vss~~  157 (266)
                      +.+|.++.-|.-+..+.+...+...|   .+.+.-...-...+++.+++.++.  +|++||.+-+.
T Consensus       184 ~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~--gG~lVYsTCSl  247 (313)
T d1ixka_         184 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP--GGILVYSTCSL  247 (313)
T ss_dssp             CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEEESCC
T ss_pred             ccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCC--CcEEEEeeccC
Confidence            56898888776554443322221111   122333344445666666666654  47999976543

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=83.44  E-value=0.21  Score=35.25  Aligned_cols=37  Identities=14%  Similarity=0.004  Sum_probs=26.9

Q ss_pred             CCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHH
Q 024551           26 GTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEW   62 (266)
Q Consensus        26 as~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l   62 (266)
                      |+|.+|+++++.|.+.+..+.+.+|++++++++.++.
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            4577999999988665444568999999998887764

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.34  E-value=1.4  Score=34.01  Aligned_cols=73  Identities=10%  Similarity=0.021  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCc-hHHHHHHHHHHCC-CeEEEecCChhHHHHHHHHHHhcC--CeeEEEeccCCCHHHHHHHHHHHHhh
Q 024551           17 RGMTALVTGGTRG-IGYAIVEELARFG-ASVHTCGRDQNMINERIQEWESKG--FKVTGSVCDLSFGDQREKLIETVSSV   92 (266)
Q Consensus        17 ~~k~vlItGas~g-iG~aia~~la~~G-~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   92 (266)
                      .|++||-.||+.| ++.    .++++| .+|+.++.++...+.+.+-+..++  .++.+++.|..+..          . 
T Consensus       107 ~g~~VlD~~aG~G~~~l----~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~----------~-  171 (260)
T d2frna1         107 PDELVVDMFAGIGHLSL----PIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP----------G-  171 (260)
T ss_dssp             TTCEEEETTCTTTTTHH----HHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC----------C-
T ss_pred             CccEEEECcceEcHHHH----HHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc----------c-
Confidence            5899998887654 433    344455 589999999999888887776654  57899999987532          1 


Q ss_pred             cCCcccEEEeccc
Q 024551           93 FDGKLNILVNNAA  105 (266)
Q Consensus        93 ~~~~id~lv~~ag  105 (266)
                       .+..|.+|.+..
T Consensus       172 -~~~~D~Ii~~~p  183 (260)
T d2frna1         172 -ENIADRILMGYV  183 (260)
T ss_dssp             -CSCEEEEEECCC
T ss_pred             -CCCCCEEEECCC
Confidence             146898887643

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=83.27  E-value=0.55  Score=35.44  Aligned_cols=32  Identities=25%  Similarity=0.281  Sum_probs=26.9

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCChh
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQN   53 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~~   53 (266)
                      |+|.||. --|...|..|+++|++|+++.++..
T Consensus         5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            6777774 5788999999999999999998754

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=83.19  E-value=1.3  Score=32.98  Aligned_cols=71  Identities=14%  Similarity=0.065  Sum_probs=49.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCc
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGK   96 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   96 (266)
                      .+++||=.||+.|.   .+..|++.|++|++++.+++.++...+.    + ...++..|+.+..           ...+.
T Consensus        42 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~l~~a~~~----~-~~~~~~~~~~~l~-----------~~~~~  102 (246)
T d2avna1          42 NPCRVLDLGGGTGK---WSLFLQERGFEVVLVDPSKEMLEVAREK----G-VKNVVEAKAEDLP-----------FPSGA  102 (246)
T ss_dssp             SCCEEEEETCTTCH---HHHHHHTTTCEEEEEESCHHHHHHHHHH----T-CSCEEECCTTSCC-----------SCTTC
T ss_pred             CCCEEEEECCCCch---hcccccccceEEEEeecccccccccccc----c-ccccccccccccc-----------ccccc
Confidence            56789999988773   5678899999999999999877655442    2 2234566766531           11257


Q ss_pred             ccEEEecccc
Q 024551           97 LNILVNNAAL  106 (266)
Q Consensus        97 id~lv~~ag~  106 (266)
                      +|+++....+
T Consensus       103 fD~ii~~~~~  112 (246)
T d2avna1         103 FEAVLALGDV  112 (246)
T ss_dssp             EEEEEECSSH
T ss_pred             ccceeeecch
Confidence            9999876654

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=83.18  E-value=4.5  Score=26.62  Aligned_cols=81  Identities=9%  Similarity=0.099  Sum_probs=54.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      +|++||.=-...+-..+.+.|.+.|++|..+....+.++    .+.+....+.++-..+-+.+. -++++++++.. ..+
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~----~~~~~~~dlillD~~mP~~~G-~el~~~lr~~~-~~~   74 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALD----IVTKERPDLVLLDMKIPGMDG-IEILKRMKVID-ENI   74 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHH----HHHHHCCSEEEEESCCTTCCH-HHHHHHHHHHC-TTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHH----HHHhCCCCEEEEeccCCCCCH-HHHHHHHHHhC-CCC
Confidence            588999999999999999999999999987664444333    333334455555444445544 35667777765 456


Q ss_pred             cEEEecc
Q 024551           98 NILVNNA  104 (266)
Q Consensus        98 d~lv~~a  104 (266)
                      -+++..+
T Consensus        75 pvi~lt~   81 (119)
T d1peya_          75 RVIIMTA   81 (119)
T ss_dssp             EEEEEES
T ss_pred             cEEEEec
Confidence            6666654

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.93  E-value=0.44  Score=35.67  Aligned_cols=34  Identities=29%  Similarity=0.379  Sum_probs=28.3

Q ss_pred             CEEEEecCCCchHHH-----HHHHHHHCCCeEEEecCCh
Q 024551           19 MTALVTGGTRGIGYA-----IVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        19 k~vlItGas~giG~a-----ia~~la~~G~~v~~~~r~~   52 (266)
                      |++.|+++-||.|+.     +|..|+++|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            789999999998876     5677889999999987653

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.58  E-value=6.3  Score=27.82  Aligned_cols=35  Identities=9%  Similarity=0.082  Sum_probs=23.1

Q ss_pred             EEEEecC-CCchHHHHHHHHHHCC----CeEEEecCChhH
Q 024551           20 TALVTGG-TRGIGYAIVEELARFG----ASVHTCGRDQNM   54 (266)
Q Consensus        20 ~vlItGa-s~giG~aia~~la~~G----~~v~~~~r~~~~   54 (266)
                      .+.|.|| |.|.+.+++.-+....    -.+++.+.+++.
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            4566665 5567777766655532    368999998754

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.37  E-value=0.63  Score=36.45  Aligned_cols=31  Identities=23%  Similarity=0.381  Sum_probs=26.3

Q ss_pred             EEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           21 ALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        21 vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      |+|.|+ +..|...|.+|+++|++|+++.+.+
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            677776 6678999999999999999988754

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=82.26  E-value=3  Score=32.33  Aligned_cols=53  Identities=15%  Similarity=0.083  Sum_probs=32.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHCCCeEEEecC-ChhHHHHHHHHHHhcCCeeEEEe
Q 024551           19 MTALVTGGTRGIGYAIVEELARFGASVHTCGR-DQNMINERIQEWESKGFKVTGSV   73 (266)
Q Consensus        19 k~vlItGas~giG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~   73 (266)
                      ...+|+-.++.-|.++|..-...|.+++++.. +.+  +...+.++..|.+++.+.
T Consensus        60 ~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~--~~k~~~~~~~GA~v~~v~  113 (292)
T d2bhsa1          60 GDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMS--QERRAAMRAYGAELILVT  113 (292)
T ss_dssp             TSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCC--HHHHHHHHHTTCEEEEEC
T ss_pred             CceeeeecccchhHHHHHHHHhcCcceEeeeccCch--hhhhHHHHHhCCCcceee
Confidence            56688888888999999888888877554432 222  122233444455554443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=82.14  E-value=0.55  Score=35.94  Aligned_cols=32  Identities=22%  Similarity=0.252  Sum_probs=27.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .|+|.|| |--|.+.|.+|+++|++|.++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4788888 5678899999999999999987753

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.03  E-value=0.68  Score=34.43  Aligned_cols=38  Identities=18%  Similarity=0.246  Sum_probs=31.9

Q ss_pred             ccCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecCCh
Q 024551           14 WSLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGRDQ   52 (266)
Q Consensus        14 ~~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r~~   52 (266)
                      .+++||+|+|.|++. -|-.+|.++++.+++++.+.|..
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhcccccccccc
Confidence            468999999998865 47899999999999988877754

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=81.80  E-value=3.3  Score=26.05  Aligned_cols=68  Identities=16%  Similarity=0.173  Sum_probs=45.4

Q ss_pred             EEEEecCCCchHH-HHHHHHHHCCCeEEEecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCccc
Q 024551           20 TALVTGGTRGIGY-AIVEELARFGASVHTCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKLN   98 (266)
Q Consensus        20 ~vlItGas~giG~-aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~id   98 (266)
                      ++-+.|- +|+|- ++|+.|.++|+.|...+++..   +..+.|++.|.++. ..-|..+              . ...|
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~---~~t~~L~~~Gi~i~-~gh~~~~--------------i-~~~d   62 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEET---ERTAYLRKLGIPIF-VPHSADN--------------W-YDPD   62 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHTTCCEE-SSCCTTS--------------C-CCCS
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCC---hhHHHHHHCCCeEE-eeecccc--------------c-CCCC
Confidence            4555554 45554 589999999999999999864   34455777775553 1222221              1 3479


Q ss_pred             EEEeccccc
Q 024551           99 ILVNNAALV  107 (266)
Q Consensus        99 ~lv~~ag~~  107 (266)
                      .+|...++.
T Consensus        63 ~vV~SsAI~   71 (89)
T d1j6ua1          63 LVIKTPAVR   71 (89)
T ss_dssp             EEEECTTCC
T ss_pred             EEEEecCcC
Confidence            999999975

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.65  E-value=4.5  Score=28.42  Aligned_cols=36  Identities=14%  Similarity=0.343  Sum_probs=33.2

Q ss_pred             cCCCCEEEEecCCCchHHHHHHHHHHCCCeEEEecC
Q 024551           15 SLRGMTALVTGGTRGIGYAIVEELARFGASVHTCGR   50 (266)
Q Consensus        15 ~~~~k~vlItGas~giG~aia~~la~~G~~v~~~~r   50 (266)
                      +++|+++++.|-.+.+..+.+..+.+-|+++.+++-
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P   36 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATP   36 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEecc
Confidence            478999999999999999999999999999998875

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.71  E-value=3.7  Score=27.82  Aligned_cols=34  Identities=18%  Similarity=0.224  Sum_probs=26.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHH----HCCCeEEEecCCh
Q 024551           18 GMTALVTGGTRGIGYAIVEELA----RFGASVHTCGRDQ   52 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la----~~G~~v~~~~r~~   52 (266)
                      .|+++|.|| |.+|-.+|..|+    +.|.+|.++.+..
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            678888877 778888888875    3588998876643

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.61  E-value=0.98  Score=33.56  Aligned_cols=88  Identities=11%  Similarity=0.022  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCCchHHH-HH---HHHHHC-----CCeEEEecCChhHHHHHHHHHHh--------------cCCeeEEEe
Q 024551           17 RGMTALVTGGTRGIGYA-IV---EELARF-----GASVHTCGRDQNMINERIQEWES--------------KGFKVTGSV   73 (266)
Q Consensus        17 ~~k~vlItGas~giG~a-ia---~~la~~-----G~~v~~~~r~~~~~~~~~~~l~~--------------~~~~~~~~~   73 (266)
                      +.-+.+|.||||-+.+- +-   .+|...     +.+|+.++|++-..++..+.+.+              .-.++.++.
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            34578999999987653 11   122333     46799999976444444443321              124688889


Q ss_pred             ccCCCHHHHHHHHHHHHhhc-CCcccEEEecc
Q 024551           74 CDLSFGDQREKLIETVSSVF-DGKLNILVNNA  104 (266)
Q Consensus        74 ~D~~~~~~i~~~~~~~~~~~-~~~id~lv~~a  104 (266)
                      .|++|+++..++-+.+.+.. +..-..+++-|
T Consensus        99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             CcCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            99999999888877666542 11234455543

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=80.54  E-value=6.2  Score=31.05  Aligned_cols=76  Identities=16%  Similarity=0.275  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCC--CeEEEecCChhHHHHHHHHHHhc-----CCeeEEEeccCCCHHHHHHHHHHH
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFG--ASVHTCGRDQNMINERIQEWESK-----GFKVTGSVCDLSFGDQREKLIETV   89 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G--~~v~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~i~~~~~~~   89 (266)
                      +-|.|||.|++.|   .++++++++.  .+|.++.-+++-++...+.+...     ..++.++..|..      +.++  
T Consensus       106 ~pk~VLIiGgG~G---~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~------~~l~--  174 (312)
T d2b2ca1         106 DPKRVLIIGGGDG---GILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGF------EFLK--  174 (312)
T ss_dssp             SCCEEEEESCTTS---HHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHH------HHHH--
T ss_pred             CCCeEEEeCCCch---HHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHH------HHHH--
Confidence            4589999998877   4677877764  57999999998877666655331     346776666632      2333  


Q ss_pred             HhhcCCcccEEEeccc
Q 024551           90 SSVFDGKLNILVNNAA  105 (266)
Q Consensus        90 ~~~~~~~id~lv~~ag  105 (266)
                       +. ..+.|++|.-.-
T Consensus       175 -~~-~~~yDvII~D~~  188 (312)
T d2b2ca1         175 -NH-KNEFDVIITDSS  188 (312)
T ss_dssp             -HC-TTCEEEEEECCC
T ss_pred             -hC-CCCCCEEEEcCC
Confidence             32 257899998643

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=80.51  E-value=3.3  Score=32.63  Aligned_cols=31  Identities=26%  Similarity=0.400  Sum_probs=22.3

Q ss_pred             EEEEecCCCc---hHHHHHHHHHHCCCeEEEecC
Q 024551           20 TALVTGGTRG---IGYAIVEELARFGASVHTCGR   50 (266)
Q Consensus        20 ~vlItGas~g---iG~aia~~la~~G~~v~~~~r   50 (266)
                      +++.++||+|   =-.++|++|+++|++|.+++.
T Consensus         3 il~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           3 VLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            4444566643   235689999999999988774

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.21  E-value=4.4  Score=28.82  Aligned_cols=71  Identities=14%  Similarity=0.078  Sum_probs=44.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHC-CCeEE-EecCChhHHHHHHHHHHhcCCeeEEEeccCCCHHHHHHHHHHHHhhcCCcc
Q 024551           20 TALVTGGTRGIGYAIVEELARF-GASVH-TCGRDQNMINERIQEWESKGFKVTGSVCDLSFGDQREKLIETVSSVFDGKL   97 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~-G~~v~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~i   97 (266)
                      ++.|.|+ |.+|+..++.+... +++|+ ++++++++.++..++..-. ....+       .++.+++++      ...+
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~ll~------~~~i   67 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYP-ESTKI-------HGSYESLLE------DPEI   67 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCC-TTCEE-------ESSHHHHHH------CTTC
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccc-cceee-------cCcHHHhhh------cccc
Confidence            4667786 57999999888775 56766 6789988877766654211 11111       123444443      1468


Q ss_pred             cEEEeccc
Q 024551           98 NILVNNAA  105 (266)
Q Consensus        98 d~lv~~ag  105 (266)
                      |+++.+..
T Consensus        68 D~v~I~tp   75 (184)
T d1ydwa1          68 DALYVPLP   75 (184)
T ss_dssp             CEEEECCC
T ss_pred             ceeeeccc
Confidence            88887664

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=80.10  E-value=4.6  Score=30.72  Aligned_cols=75  Identities=17%  Similarity=0.169  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCCc-hHHHHHHHHHHCCCeEEEecCChhHHHHHHHHHHhc--CCeeEEEeccCCCHHHHHHHHHHHHhhc
Q 024551           17 RGMTALVTGGTRG-IGYAIVEELARFGASVHTCGRDQNMINERIQEWESK--GFKVTGSVCDLSFGDQREKLIETVSSVF   93 (266)
Q Consensus        17 ~~k~vlItGas~g-iG~aia~~la~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   93 (266)
                      .|.+||=.|+++| +..++|+.+.. +.+|+.++++++.++...+.+.+.  ..++.+...|+.+.-            .
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~------------~  151 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI------------S  151 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC------------C
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc------------c
Confidence            5789999997766 45555555433 348999999999999888888764  357889999987631            1


Q ss_pred             CCcccEEEecc
Q 024551           94 DGKLNILVNNA  104 (266)
Q Consensus        94 ~~~id~lv~~a  104 (266)
                      ...+|.++.+.
T Consensus       152 ~~~fD~V~ld~  162 (250)
T d1yb2a1         152 DQMYDAVIADI  162 (250)
T ss_dssp             SCCEEEEEECC
T ss_pred             cceeeeeeecC
Confidence            25689998753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.08  E-value=1.1  Score=34.73  Aligned_cols=32  Identities=22%  Similarity=0.293  Sum_probs=25.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHCCCeEEEecC
Q 024551           18 GMTALVTGGTRGIGYAIVEELARFGASVHTCGR   50 (266)
Q Consensus        18 ~k~vlItGas~giG~aia~~la~~G~~v~~~~r   50 (266)
                      .+.|+|.||+ -=|...|.+|+++|++|.++-+
T Consensus         5 ~~kViVIGaG-~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           5 TGKVIIIGSG-VSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CCEEEEECCB-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCcEEEECCC-HHHHHHHHHHHhCCCCEEEEeC
Confidence            4568888874 4577899999999999998744

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.07  E-value=1.2  Score=32.51  Aligned_cols=38  Identities=13%  Similarity=0.121  Sum_probs=30.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHHHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMINERI   59 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~~~~   59 (266)
                      .+.|.| .|-+|..+|..|+ +|++|++++-+++..+++.
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence            356666 6889999998775 6999999999998765543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=80.07  E-value=0.78  Score=34.91  Aligned_cols=36  Identities=19%  Similarity=0.359  Sum_probs=28.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHCCCeEEEecCChhHHH
Q 024551           20 TALVTGGTRGIGYAIVEELARFGASVHTCGRDQNMIN   56 (266)
Q Consensus        20 ~vlItGas~giG~aia~~la~~G~~v~~~~r~~~~~~   56 (266)
                      -|+|.|| +.-|...|.+|+++|.+|+++.+++....
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~   41 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGR   41 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCH
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCC
Confidence            3677776 45677889999999999999999876543

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=80.05  E-value=0.71  Score=32.92  Aligned_cols=30  Identities=13%  Similarity=0.070  Sum_probs=24.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHCCCeEEE
Q 024551           17 RGMTALVTGGTRGIGYAIVEELARFGASVHT   47 (266)
Q Consensus        17 ~~k~vlItGas~giG~aia~~la~~G~~v~~   47 (266)
                      +++.|+|.|| |.+|..+|..|.+.|.+|.+
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v   31 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNI   31 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEE
Confidence            3678888887 77999999999999977443