BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024559
(266 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 101/193 (52%), Gaps = 23/193 (11%)
Query: 77 TEIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLK 136
EI+ ++P A ++ N + +E E + +LA P + ++TV +SKTG+ + + R S +LK
Sbjct: 318 VEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLK 377
Query: 137 RGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDE----FNTKNGG 192
D +I + +RI DFT + E +QV +Y +G YD H+D+ E F T N G
Sbjct: 378 GDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTG 437
Query: 193 QRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSM 252
R+AT+L Y+S E GG TVF N L G +V P + DAL ++++
Sbjct: 438 NRIATVLFYMSQPERGGATVF-------------NHL------GTAVFPSKNDALFWYNL 478
Query: 253 RPDATLDPSSLHG 265
R D D + H
Sbjct: 479 RRDGEGDLRTRHA 491
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 83 EPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRI 142
+PR +H+ +S AE E + DLAKP + ++TV D +TG+ ++ R S +L +D +
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPV 393
Query: 143 IRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFL----DEFNTKNGGQRMATL 198
+ I RI D T + + E +QV +Y VG +Y+ H+D+ D F G R+AT
Sbjct: 394 VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATW 453
Query: 199 LMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATL 258
L Y+SDV GG TVFP G SV PK+G A+ ++++
Sbjct: 454 LFYMSDVSAGGATVFPEV-------------------GASVWPKKGTAVFWYNLFASGEG 494
Query: 259 DPSSLHG 265
D S+ H
Sbjct: 495 DYSTRHA 501
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 83 EPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRI 142
+PR +H+ +S AE E + DLAKP + ++T+ + TG + R S +L +D +
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPV 393
Query: 143 IRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFL----DEFNTKNGGQRMATL 198
+ I RI D T + + E +QV +Y VG +Y+ H+D+ D F G R+AT
Sbjct: 394 VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATW 453
Query: 199 LMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATL 258
L Y+SDV GG TVFP G SV PK+G A+ ++++
Sbjct: 454 LFYMSDVSAGGATVFPEV-------------------GASVWPKKGTAVFWYNLFASGEG 494
Query: 259 DPSSLHG 265
D S+ H
Sbjct: 495 DYSTRHA 501
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 83 EPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRI 142
+PR +H+ +S AE E + DLAKP + ++T+ + TG + R S +L ++ +
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPV 393
Query: 143 IRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFL----DEFNTKNGGQRMATL 198
+ I RI D T + + E +QV +Y VG +Y+ H+D+ D F G R+AT
Sbjct: 394 VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATW 453
Query: 199 LMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATL 258
L Y+SDV GG TVFP G SV PK+G A+ ++++
Sbjct: 454 LFYMSDVSAGGATVFPEV-------------------GASVWPKKGTAVFWYNLFASGEG 494
Query: 259 DPSSLHG 265
D S+ H
Sbjct: 495 DYSTRHA 501
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 83 EPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRI 142
+PR +H+ +S AE E + DLAKP + ++T+ + TG + R S +L ++ +
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPV 393
Query: 143 IRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFL----DEFNTKNGGQRMATL 198
+ I RI D T + + E +QV +Y VG +Y+ H+D+ D F G R+AT
Sbjct: 394 VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATW 453
Query: 199 LMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATL 258
L Y+SDV GG TVFP G SV PK+G A+ ++++
Sbjct: 454 LFYMSDVSAGGATVFPEV-------------------GASVWPKKGTAVFWYNLFASGEG 494
Query: 259 DPSSLHG 265
D S+ H
Sbjct: 495 DYSTRHA 501
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 83 EPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRI 142
+PR +H+ +S AE E + DLAKP + ++T+ + TG + R S +L ++ +
Sbjct: 334 KPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPV 393
Query: 143 IRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFL----DEFNTKNGGQRMATL 198
+ I RI D T + + E +QV +Y VG +Y+ H+D+ D F G R+AT
Sbjct: 394 VSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATW 453
Query: 199 LMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATL 258
L Y+SDV GG TVFP G SV PK+G A+ ++++
Sbjct: 454 LFYMSDVLAGGATVFPEV-------------------GASVWPKKGTAVFWYNLFASGEG 494
Query: 259 DPSSLHG 265
D S+ H
Sbjct: 495 DYSTRHA 501
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 83 EPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRI 142
+PR + + +S E E + +LAKP + ++TV D +TG+ + R S +L + +
Sbjct: 316 KPRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPV 375
Query: 143 IRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFL----DEFNTKNGGQRMATL 198
+ I RI D T + + E +QV +Y VG +Y+ H+D+ D F G R+AT
Sbjct: 376 VSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATW 435
Query: 199 LMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATL 258
L Y+SDV GG TVFP G SV PK+G A+ ++++ P
Sbjct: 436 LFYMSDVSAGGATVFPEV-------------------GASVWPKKGTAVFWYNLFPSGEG 476
Query: 259 DPSSLHG 265
D S+ H
Sbjct: 477 DYSTRHA 483
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 94.4 bits (233), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 84 PRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRII 143
P Y++ +S E E + LAKP + ++TV D KTG + R S ++L+ D ++
Sbjct: 337 PHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 396
Query: 144 RGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNT--KNGGQRMATLLMY 201
+ +R+ T + ++ E +QV +Y +G +Y+ H+D+ F++ K+ G R+AT L Y
Sbjct: 397 AKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNY 456
Query: 202 LSDVEEGGETVFPAANANF-----TSVRWWN 227
+SDVE GG TVFP A T+V W+N
Sbjct: 457 MSDVEAGGATVFPDFGAAIWPKKGTAVFWYN 487
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 84 PRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRII 143
P Y++ +S E E + ++AKP + ++TV D KTG + R S ++L+ D ++
Sbjct: 336 PHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 395
Query: 144 RGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYF----LDEFNTKNGGQRMATLL 199
+ +R+ T + ++ E +QV +Y VG +Y+ H+D+ D F G R+AT L
Sbjct: 396 ARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFL 455
Query: 200 MYLSDVEEGGETVFPAANANF-----TSVRWWNEL 229
Y+SDVE GG TVFP A T+V W+N L
Sbjct: 456 NYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLL 490
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 84 PRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRII 143
P Y++ +S E E + ++AKP + ++TV D KTG + R S ++L+ D ++
Sbjct: 338 PHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVV 397
Query: 144 RGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFL----DEFNTKNGGQRMATLL 199
+ +R+ T + ++ E +QV +Y +G +Y+ H+D+ D F G R+AT L
Sbjct: 398 ARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFL 457
Query: 200 MYLSDVEEGGETVFPAANANF-----TSVRWWNEL 229
Y+SDVE GG TVFP A T+V W+N L
Sbjct: 458 NYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLL 492
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 23/193 (11%)
Query: 77 TEIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLK 136
EI + P A ++ + +S E + +LAKP + ++TV DS TG+ + R S +LK
Sbjct: 321 VEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLK 380
Query: 137 RGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDE----FNTKNGG 192
+ ++ + KRI T + ME E +Q+ +Y +G YD H+D+ E F + G
Sbjct: 381 EWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTG 440
Query: 193 QRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSM 252
R+AT+L Y+S GG TVF A + ++ P + DAL ++++
Sbjct: 441 NRIATVLFYMSQPSHGGGTVFTEAKS-------------------TILPTKNDALFWYNL 481
Query: 253 RPDATLDPSSLHG 265
+P + H
Sbjct: 482 YKQGDGNPDTRHA 494
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 12/160 (7%)
Query: 78 EIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKR 137
E++ EP +YH+F+S AE + + LA+P++ +S V + + R+ S+ +LK
Sbjct: 340 EVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVVASGEKQLPVEYRISKSA--WLKD 397
Query: 138 GQDRIIRGIEKRIADFTFIPME--HGEGIQVLHYEVGQKYDAHYDYFLDEFNT---KNGG 192
D ++ ++ RIA T + ++ + E +QV++Y +G Y+ H+D+ + N G
Sbjct: 398 TVDPVLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMNSG 457
Query: 193 QRMATLLMYLSDVEEGGETVFPAANANFTSVR-----WWN 227
R+AT ++YLS VE GG T F N + V+ WWN
Sbjct: 458 NRVATFMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWN 497
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
Query: 78 EIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKR 137
E++ EP +YH+F+S +E + + +LA+P++ +S V + + R+ S +LK
Sbjct: 340 EVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRSVVASGEKQLQVEYRI--SKSAWLKD 397
Query: 138 GQDRIIRGIEKRIADFTFIPME--HGEGIQVLHYEVGQKYDAHYDYFLDEFNT---KNGG 192
D + + RIA T + + + E +QV++Y +G Y+ H+D+ + G
Sbjct: 398 TVDPKLVTLNHRIAALTGLDVRPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSG 457
Query: 193 QRMATLLMYLSDVEEGGETVFPAANANFTSVR-----WWN 227
R+AT ++YLS VE GG T F AN + VR WWN
Sbjct: 458 NRVATFMIYLSSVEAGGATAFIYANLSVPVVRNAALFWWN 497
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
Query: 78 EIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKR 137
E++ P +YH+F+S E + + +LA+P++ +S V + + R+ S +LK
Sbjct: 340 EVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVASGEKQLQVEYRI--SKSAWLKD 397
Query: 138 GQDRIIRGIEKRIADFTFIPME--HGEGIQVLHYEVGQKYDAHYDYFL---DEFNTKNGG 192
D ++ +++RIA T + ++ + E +QV++Y +G Y+ H+D+ G
Sbjct: 398 TVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKSG 457
Query: 193 QRMATLLMYLSDVEEGGETVFPAANANFTSVR-----WWN 227
R ATL++YLS VE GG T F N + V+ WWN
Sbjct: 458 NRAATLMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWN 497
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
Query: 78 EIVAWEPRAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKR 137
E+V P +YH+F+S E + + +LA+P++ +S V + + R+ S +LK
Sbjct: 338 EVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVASGEKQLQVEYRI--SKSAWLKD 395
Query: 138 GQDRIIRGIEKRIADFTFIPME--HGEGIQVLHYEVGQKYDAHYDYFLDEFNT---KNGG 192
D ++ ++ RIA T + ++ + E +QV++Y +G Y+ H+D+ + G
Sbjct: 396 TVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSG 455
Query: 193 QRMATLLMYLSDVEEGGETVFPAANANFTSVR-----WWN 227
R+AT ++YLS VE GG T F N + V+ WWN
Sbjct: 456 NRVATFMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWN 495
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 85 RAFVYHNFLSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIR 144
+ FV +N ++ +C+ ++ A + DS+ D +R S ++ + + +++
Sbjct: 59 KPFVLNNLINPTKCQEIMQFAN-----GKLFDSQVLSGTDKNIRNSQQMWISKN-NPMVK 112
Query: 145 GIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLD------EFNTKNGGQRMATL 198
I + I +P ++ E +QV+ Y Q Y+ H+D D EF + GGQR+ T+
Sbjct: 113 PIFENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEF-IERGGQRILTV 171
Query: 199 LMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDAT- 257
L+YL++ G T FP N F KPK GDAL+F+ + ++
Sbjct: 172 LIYLNNEFSDGHTYFPNLNQKF-------------------KPKTGDALVFYPLANNSNK 212
Query: 258 LDPSSLHG 265
P SLH
Sbjct: 213 CHPYSLHA 220
>sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2
SV=1
Length = 503
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 42/176 (23%)
Query: 127 VRTSSGTFLKRGQ--DRIIRGIEKRIADFTFIP---MEHGEGIQVLHYEVGQKYDAHYD- 180
VR S T+L +G+ ++R I +R+ T + +E E +QV+ Y G Y AH D
Sbjct: 273 VRNSHHTWLHQGEGAHHVMRAIRQRVLRLTRLSPEIVEFSEPLQVVRYGEGGHYHAHVDS 332
Query: 181 -------------YFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWN 227
+E R T+L YL++V GGETVFP A+ R ++
Sbjct: 333 GPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADN-----RTYD 387
Query: 228 ELS-------------ECGKQGLSVKPKRGDALLFWSMRPDAT-----LDPSSLHG 265
E+S C K L VKP++G A+ +++ PD +D SLHG
Sbjct: 388 EMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSLHG 443
>sp|Q9NXG6|P4HTM_HUMAN Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1
SV=2
Length = 502
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 42/176 (23%)
Query: 127 VRTSSGTFLKRGQ--DRIIRGIEKRIADFTFIP---MEHGEGIQVLHYEVGQKYDAHYD- 180
VR S T+L +G+ I+R I +R+ T + +E E +QV+ Y G Y AH D
Sbjct: 272 VRNSHHTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYHAHVDS 331
Query: 181 -------------YFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWN 227
+E R T+L YL++V GGETVFP A+ R ++
Sbjct: 332 GPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADN-----RTYD 386
Query: 228 ELS-------------ECGKQGLSVKPKRGDALLFWSMRPDAT-----LDPSSLHG 265
E+S C K L VKP++G A+ +++ PD +D SLHG
Sbjct: 387 EMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSLHG 442
>sp|O31646|MANA1_BACSU Mannose-6-phosphate isomerase ManA OS=Bacillus subtilis (strain
168) GN=manA PE=3 SV=1
Length = 315
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 93 LSKAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQ-DRIIRGIEKRIA 151
L K EC Y+ID K D++ ++ + T ++RG+ D ++R ++ +
Sbjct: 111 LGKTECWYIIDCQK---------DAEIIYGHNATTKEELTTMIERGEWDELLRRVKVKPG 161
Query: 152 DFTFIP--MEHGEGIQVLHYEVGQKYDAHY 179
DF ++P H G +L E Q D Y
Sbjct: 162 DFFYVPSGTVHAIGKGILALETQQNSDTTY 191
>sp|B7K3F6|DTD_CYAP8 D-tyrosyl-tRNA(Tyr) deacylase OS=Cyanothece sp. (strain PCC 8801)
GN=dtd PE=3 SV=1
Length = 147
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 40 FYIPIGDDDSPPNDLTSFRRRAFEKRSSIAEEKGEQWTEIVA-WEPRAFVYHNFLSKAEC 98
+ IG++D+ ++L R+ E R AEE G++W + V + V F +C
Sbjct: 29 LLVGIGNNDTE-SELDWMTRKCLELRLFPAEEGGDRWEKSVQEIQGELLVISQFTLYGDC 87
Query: 99 E-----YLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTF 134
D A P + K T+ D Q KDS ++ +G F
Sbjct: 88 RKGRRPSFSDSASPSIAK-TLYDQFVAQLKDSGLKVETGIF 127
>sp|A4J103|RPOB_DESRM DNA-directed RNA polymerase subunit beta OS=Desulfotomaculum
reducens (strain MI-1) GN=rpoB PE=3 SV=1
Length = 1145
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 94 SKAEC-EYLIDLAKPYMVKSTVVDSKTGQSKDSRV-------RTSSGTFLKRGQDRII 143
S EC E + A P VK +++ +TG+ K+ V TS GTF+ G +R+I
Sbjct: 75 SVEECKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTSKGTFIINGAERVI 132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,937,958
Number of Sequences: 539616
Number of extensions: 4122526
Number of successful extensions: 9841
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 9793
Number of HSP's gapped (non-prelim): 31
length of query: 266
length of database: 191,569,459
effective HSP length: 115
effective length of query: 151
effective length of database: 129,513,619
effective search space: 19556556469
effective search space used: 19556556469
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)