BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024560
(266 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2 OS=Oryza sativa subsp.
japonica GN=ACLA-2 PE=2 SV=2
Length = 423
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/266 (92%), Positives = 256/266 (96%)
Query: 1 MTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGE 60
MT DACAPLIATLPLE RGKIGDFI GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDMRGE
Sbjct: 158 MTPDACAPLIATLPLEARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGE 217
Query: 61 LDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVA 120
LDDTAAFKNFKKW NIEFPLPFGRVLSSTE FIH LDEKTSASLKFTVLNPKGRIWTMVA
Sbjct: 218 LDDTAAFKNFKKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVA 277
Query: 121 GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLI 180
GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVV+DCATADPDGRKRALLI
Sbjct: 278 GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLI 337
Query: 181 GGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGI 240
GGGIANFTDV TF+GIIRALREKESKLKAARMHI+VRRGGPNYQTGLAKMR LG ELG+
Sbjct: 338 GGGIANFTDVGATFSGIIRALREKESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGV 397
Query: 241 PLEVYGPEATMTGICKQAIDCIMSAS 266
P+EVYGPEATMTGICKQAI+C+M+A+
Sbjct: 398 PIEVYGPEATMTGICKQAIECVMAAA 423
>sp|O80526|ACLA3_ARATH ATP-citrate synthase alpha chain protein 3 OS=Arabidopsis thaliana
GN=ACLA-3 PE=2 SV=1
Length = 424
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/263 (91%), Positives = 254/263 (96%)
Query: 1 MTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGE 60
MTL+ CAPLIATLPLE R KIG+FIMG FAVFQDLDFSF+EMNPFTLV+GEP+PLDMRGE
Sbjct: 158 MTLEVCAPLIATLPLEVRAKIGNFIMGAFAVFQDLDFSFMEMNPFTLVDGEPFPLDMRGE 217
Query: 61 LDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVA 120
LDDTAAFKNF KW +IEFPLPFGRVLSSTE+FIH LDEKTSASLKFTVLNPKGRIWTMVA
Sbjct: 218 LDDTAAFKNFNKWGDIEFPLPFGRVLSSTENFIHGLDEKTSASLKFTVLNPKGRIWTMVA 277
Query: 121 GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLI 180
GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT DPDGRKRALLI
Sbjct: 278 GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATTDPDGRKRALLI 337
Query: 181 GGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGI 240
GGGIANFTDVA TFNGIIRALREKE++LKA+RMHI+VRRGGPNYQTGLA+MRALGEELG+
Sbjct: 338 GGGIANFTDVAATFNGIIRALREKETRLKASRMHIYVRRGGPNYQTGLARMRALGEELGV 397
Query: 241 PLEVYGPEATMTGICKQAIDCIM 263
PLEVYGPEATMTGICK+AIDCIM
Sbjct: 398 PLEVYGPEATMTGICKRAIDCIM 420
>sp|Q2QNG7|ACLA3_ORYSJ ATP-citrate synthase alpha chain protein 3 OS=Oryza sativa subsp.
japonica GN=ACLA-3 PE=2 SV=1
Length = 423
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/266 (90%), Positives = 255/266 (95%)
Query: 1 MTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGE 60
MT DACAPLIATLPLE R KIGDFI GV++VFQDLDFSF+EMNPFT+VNGEPYPLDMRGE
Sbjct: 158 MTPDACAPLIATLPLEVRTKIGDFIRGVYSVFQDLDFSFLEMNPFTMVNGEPYPLDMRGE 217
Query: 61 LDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVA 120
LDDTAAFKNFKKW NI+FPLPFGRVLS +ESFIH LDEKTS+SLKFTVLNPKGRIWTMVA
Sbjct: 218 LDDTAAFKNFKKWGNIQFPLPFGRVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVA 277
Query: 121 GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLI 180
GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVV+DCATADPDGRKRALLI
Sbjct: 278 GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLI 337
Query: 181 GGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGI 240
GGGIANFTDVA TF+GIIRALREKESKLKAARM+I+VRRGGPNYQTGLAKMR LG ELG+
Sbjct: 338 GGGIANFTDVAATFSGIIRALREKESKLKAARMNIYVRRGGPNYQTGLAKMRTLGAELGV 397
Query: 241 PLEVYGPEATMTGICKQAIDCIMSAS 266
P+EVYGPEATMTGICKQAIDCIM+ +
Sbjct: 398 PIEVYGPEATMTGICKQAIDCIMAEA 423
>sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2 OS=Arabidopsis thaliana
GN=ACLA-2 PE=2 SV=1
Length = 423
Score = 474 bits (1221), Expect = e-133, Method: Compositional matrix adjust.
Identities = 220/266 (82%), Positives = 250/266 (93%)
Query: 1 MTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGE 60
+T + CAPL+ATLPLE +G++ DFI +F +F+DLDF+F+EMNPFTLV+G+PYPLDMRGE
Sbjct: 158 LTFEICAPLVATLPLEIKGELEDFIQVIFTLFEDLDFTFLEMNPFTLVDGKPYPLDMRGE 217
Query: 61 LDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVA 120
LDDTAAFKNFKKW +IEFP+PFGRV+SSTESFIH LDEKTSASLKFTVLNPKGRIWTMVA
Sbjct: 218 LDDTAAFKNFKKWGDIEFPMPFGRVMSSTESFIHGLDEKTSASLKFTVLNPKGRIWTMVA 277
Query: 121 GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLI 180
GGGASVIYADTVGDLGYASELGNYAEYSGAP E+EVLQYARVVIDCATA+PDG+ RAL+I
Sbjct: 278 GGGASVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVI 337
Query: 181 GGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGI 240
GGGIANFTDVA TFNGIIRAL+EKE+KLKAARMHIFVRRGGPNYQ GLAKMR+LG+E+G+
Sbjct: 338 GGGIANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKGLAKMRSLGDEIGV 397
Query: 241 PLEVYGPEATMTGICKQAIDCIMSAS 266
P+EVYGPEATMTGICK+AI I +A+
Sbjct: 398 PIEVYGPEATMTGICKEAIQYITAAA 423
>sp|Q9SGY2|ACLA1_ARATH ATP-citrate synthase alpha chain protein 1 OS=Arabidopsis thaliana
GN=ACLA-1 PE=1 SV=1
Length = 423
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/266 (82%), Positives = 247/266 (92%)
Query: 1 MTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGE 60
+T + CAPL+ATLPLE + +I +FI +F +FQDLDF+F+EMNPFTLV+G PYPLDMRGE
Sbjct: 158 LTPEICAPLVATLPLEIKAEIEEFIKVIFTLFQDLDFTFLEMNPFTLVDGSPYPLDMRGE 217
Query: 61 LDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVA 120
LDDTAAFKNFKKW +IEFPLPFGRV+S TESFIH LDEKTSASLKFTVLNPKGRIWTMVA
Sbjct: 218 LDDTAAFKNFKKWGDIEFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVA 277
Query: 121 GGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLI 180
GGGASVIYADTVGDLGYASELGNYAEYSGAP E+EVLQYARVVIDCATA+PDG+ RAL+I
Sbjct: 278 GGGASVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVI 337
Query: 181 GGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGI 240
GGGIANFTDVA TFNGIIRAL+EKE+KLKAARMHIFVRRGGPNYQ GLAKMRALG+++G+
Sbjct: 338 GGGIANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKGLAKMRALGDDIGV 397
Query: 241 PLEVYGPEATMTGICKQAIDCIMSAS 266
P+EVYGPEATMTGICK+AI I +A+
Sbjct: 398 PIEVYGPEATMTGICKEAIQYITAAA 423
>sp|Q53JY8|ACLA1_ORYSJ ATP-citrate synthase subunit alpha chain protein 1 OS=Oryza sativa
subsp. japonica GN=ACLA-1 PE=3 SV=2
Length = 407
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/267 (83%), Positives = 236/267 (88%), Gaps = 18/267 (6%)
Query: 1 MTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGE 60
MT DACAPLIATLPLE RGKIGDFI GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDMRGE
Sbjct: 158 MTPDACAPLIATLPLEARGKIGDFIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGE 217
Query: 61 LDDTAAFKNFK-KWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMV 119
LDDTAAFK + KW NIEFPLPFGRVLSSTE FIH LDEKTSASLKFTVLNPKGRIWTMV
Sbjct: 218 LDDTAAFKTSRSKWGNIEFPLPFGRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMV 277
Query: 120 AGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALL 179
AGG EL NYAEYSGAPNEEEVLQYARVV+DCATADPDGRKRALL
Sbjct: 278 AGG-----------------ELENYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALL 320
Query: 180 IGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELG 239
IGGGIANFTDV TF+GIIRALREKESKLKAARMHI+VRRGGPNYQTGLAKMR LG ELG
Sbjct: 321 IGGGIANFTDVGATFSGIIRALREKESKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELG 380
Query: 240 IPLEVYGPEATMTGICKQAIDCIMSAS 266
+P+EVYGPEATMTGICKQAI+C+M+A+
Sbjct: 381 VPIEVYGPEATMTGICKQAIECVMAAA 407
>sp|Q91V92|ACLY_MOUSE ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1
Length = 1091
Score = 250 bits (638), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/258 (47%), Positives = 168/258 (65%)
Query: 2 TLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGEL 61
T D L+ P + + + FI G+F ++DL F+++E+NP + Y LD+ ++
Sbjct: 162 TEDIKRHLLVHAPEDKKEVLASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKV 221
Query: 62 DDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAG 121
D TA + KW +IEFP PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAG
Sbjct: 222 DATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAG 281
Query: 122 GGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG 181
GGASV+Y+DT+ DLG +EL NY EYSGAP+E++ YA+ ++ T + + L+IG
Sbjct: 282 GGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIG 341
Query: 182 GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIP 241
G IANFT+VA TF GI+RA+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP
Sbjct: 342 GSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIP 401
Query: 242 LEVYGPEATMTGICKQAI 259
+ V+G E MT I A+
Sbjct: 402 IHVFGTETHMTAIVGMAL 419
>sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3
Length = 1101
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 169/253 (66%), Gaps = 4/253 (1%)
Query: 9 LIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFK 68
L+ P + + + FI G+F ++DL F+++E+NP + Y LD+ ++D TA +
Sbjct: 169 LLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYI 228
Query: 69 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 128
KW +IEFP PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y
Sbjct: 229 CKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVY 288
Query: 129 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIAN 186
+DT+ DLG +EL NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IAN
Sbjct: 289 SDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIAN 346
Query: 187 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYG 246
FT+VA TF GI+RA+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G
Sbjct: 347 FTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFG 406
Query: 247 PEATMTGICKQAI 259
E MT I A+
Sbjct: 407 TETHMTAIVGMAL 419
>sp|Q32PF2|ACLY_BOVIN ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1
Length = 1091
Score = 249 bits (636), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 169/253 (66%), Gaps = 4/253 (1%)
Query: 9 LIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFK 68
L+ P + + + FI G+F ++DL F+++E+NP + Y LD+ ++D TA +
Sbjct: 169 LLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYI 228
Query: 69 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 128
KW +IEFP PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y
Sbjct: 229 CKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVY 288
Query: 129 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIAN 186
+DT+ DLG +EL NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IAN
Sbjct: 289 SDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIAN 346
Query: 187 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYG 246
FT+VA TF GI+RA+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G
Sbjct: 347 FTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFG 406
Query: 247 PEATMTGICKQAI 259
E MT I A+
Sbjct: 407 TETHMTAIVGMAL 419
>sp|Q2TCH3|ACLY_SHEEP ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1
Length = 1101
Score = 249 bits (636), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 169/253 (66%), Gaps = 4/253 (1%)
Query: 9 LIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFK 68
L+ P + + + FI G+F ++DL F+++E+NP + Y LD+ ++D TA +
Sbjct: 169 LLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYI 228
Query: 69 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 128
KW +IEFP PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y
Sbjct: 229 CKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVY 288
Query: 129 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIAN 186
+DT+ DLG +EL NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IAN
Sbjct: 289 SDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIAN 346
Query: 187 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYG 246
FT+VA TF GI+RA+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G
Sbjct: 347 FTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFG 406
Query: 247 PEATMTGICKQAI 259
E MT I A+
Sbjct: 407 TETHMTAIVGMAL 419
>sp|P16638|ACLY_RAT ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1
Length = 1100
Score = 249 bits (636), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 168/252 (66%), Gaps = 4/252 (1%)
Query: 9 LIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFK 68
L+ P + + + FI G+F ++DL F+++E+NP + Y LD+ ++D TA +
Sbjct: 169 LLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYI 228
Query: 69 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 128
KW +IEFP PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y
Sbjct: 229 CKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVY 288
Query: 129 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIAN 186
+DT+ DLG +EL NY EYSGAP+E++ YA+ ++ T + PDG + L+IGG IAN
Sbjct: 289 SDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIAN 346
Query: 187 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYG 246
FT+VA TF GI+RA+R+ + LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G
Sbjct: 347 FTNVAATFKGIVRAIRDYQGSLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFG 406
Query: 247 PEATMTGICKQA 258
E MT I A
Sbjct: 407 TETHMTAIVGMA 418
>sp|P53585|ACLY_CAEEL Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1
PE=2 SV=1
Length = 1106
Score = 247 bits (631), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/259 (47%), Positives = 170/259 (65%), Gaps = 15/259 (5%)
Query: 14 PLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKW 73
PL+ + F++ ++ ++DL F+++E+NPF L+N + + LD+ LD+TA F KW
Sbjct: 175 PLKDSDIVRRFVVELYKAYKDLHFTYLEINPFVLLNNQIHVLDLAARLDETANFLCADKW 234
Query: 74 A----------NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGG 123
++EFP PFGR L+S E +I +D KT ASLK T+LN KGR+WTMVAGGG
Sbjct: 235 KSRLTPYGGPNHVEFPAPFGRDLTSEEQYISEMDAKTGASLKLTILNRKGRVWTMVAGGG 294
Query: 124 ASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDC---ATADPDGRKRALLI 180
ASV++ DTV DLG ASEL NY EYSG P+E + +YA+ ++ T PDG + L+I
Sbjct: 295 ASVVFTDTVCDLGGASELANYGEYSGDPSESQTYEYAKTLLSVMTEGTPRPDG--KVLII 352
Query: 181 GGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGI 240
GG IANFT+VA TF GI+RA SKLK ++ IFVRRGGPNYQ GL +++ +L +
Sbjct: 353 GGSIANFTNVAKTFGGIVRAFETFVSKLKEHKVTIFVRRGGPNYQEGLRRIKDAATKLEL 412
Query: 241 PLEVYGPEATMTGICKQAI 259
P+ V+GPE MT I A+
Sbjct: 413 PIHVFGPETHMTAIVGAAL 431
>sp|O13907|ACL2_SCHPO Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC22A12.16 PE=1
SV=1
Length = 492
Score = 224 bits (572), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 166/278 (59%), Gaps = 31/278 (11%)
Query: 9 LIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV----NGEPYPLDMRGELDDT 64
L++ +P+E + DFI+ +++V+ D F+++E+NP ++ + + LD+ +LD T
Sbjct: 199 LLSDIPVEQHESLVDFIIRLYSVYVDCQFTYLEINPLVVIPTAKGADVFYLDLAAKLDQT 258
Query: 65 AAFKNFKKWA--------------------------NIEFPLPFGRVLSSTESFIHSLDE 98
A F+ KWA + FP PFGR LS E+++ LD
Sbjct: 259 AEFECGAKWAVARAPESLGIKTSGEESGAINADHGPPMVFPAPFGRELSKEEAYVQGLDA 318
Query: 99 KTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQ 158
KT ASLK T+LN +GR+W +VAGGGASV+YAD V G A EL NY EYSGAP + + +
Sbjct: 319 KTGASLKLTILNAEGRVWNLVAGGGASVVYADAVAVNGAADELANYGEYSGAPTDGQTYE 378
Query: 159 YARVVIDCAT-ADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFV 217
YA+ V+D T +P + L IGGGIANFT A TF I RAL + + KL A ++ I+V
Sbjct: 379 YAKTVLDLMTRGEPRADGKVLFIGGGIANFTSPAVTFRAIARALGDYKDKLHAHKVSIWV 438
Query: 218 RRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGIC 255
RR GPNYQ GL +R G++ +PL+VYGPE ++GI
Sbjct: 439 RRAGPNYQEGLRVIREAGKKFDLPLKVYGPECHISGIV 476
>sp|Q57663|SUCC_METJA Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=sucC PE=3
SV=1
Length = 364
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 102/246 (41%), Gaps = 53/246 (21%)
Query: 11 ATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKN 69
A LP GK+ D I ++ +F++LD + +E+NP + +G Y D LDD AAF++
Sbjct: 157 AKLPSNEIGKVADVIYKLYKIFKELDATMVEINPLVITKDGNVYAADAVLHLDDDAAFRH 216
Query: 70 ----FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 125
F+++ N E LPF V LD G + + G G +
Sbjct: 217 NYEEFEEYKNKE-KLPFAYV---------ELD---------------GDVAVIGNGAGLT 251
Query: 126 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GG 183
+ D + +LG + + G + E V R V++ + + I GG
Sbjct: 252 LASMDIINNLGRKP--ACFLDIGGGADAETVKLALRKVLENKNV------KGIFINILGG 303
Query: 184 IANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLE 243
I +VA GI+ L+E + A RM G N + G R + EE GIP E
Sbjct: 304 ITRCDEVAK---GIVEVLKEHPNVKFAVRMM------GTNEEIG----RKILEEHGIPYE 350
Query: 244 VYGPEA 249
EA
Sbjct: 351 TSMEEA 356
>sp|O67546|SUCC_AQUAE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aquifex aeolicus
(strain VF5) GN=sucC PE=3 SV=1
Length = 385
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 26 MGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 84
+ ++ ++ DLD S +E+NP L G LD + ++DD A F++ K +E
Sbjct: 178 LKLYQIYSDLDASLVEINPLVLTKEGNLIALDAKLDIDDNALFRH-KDLEEME------- 229
Query: 85 VLSSTESFIHSLD-EKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 143
E+ + L+ E L + LN G I MV G G ++ D + G E N
Sbjct: 230 ----DETQLPQLEVEAKKYGLNYIKLN--GNIGCMVNGAGLAMATMDIIKLAG--GEPAN 281
Query: 144 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 203
+ + G N E++ R+++ ADPD + + I GGI +A G+I A
Sbjct: 282 FLDVGGGANVEQIANAFRILM----ADPDVKAVFINIFGGILRVDRLA---QGLIEA--- 331
Query: 204 KESKLKAARMHIFVRRGGPNYQTG 227
SK+ R+ I R G N + G
Sbjct: 332 --SKMVELRVPIVARLEGTNVEEG 353
>sp|Q49X32|SUCC_STAS1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sucC PE=3 SV=1
Length = 388
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 39/257 (15%)
Query: 12 TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNGEPYPLDMRGELDDTAAF--K 68
+P E K F++ ++ VF + D S +E+NP T GE LD + DD A F K
Sbjct: 168 NIPKESINKAAKFLVSLYNVFIEKDCSIVEINPLVTTGEGEVLALDAKVNFDDNALFKHK 227
Query: 69 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 128
+ ++ ++E P E + L + L+ G I MV G G ++
Sbjct: 228 DIQELRDLEEEDP-------------KEIEASKYDLSYIALD--GDIGCMVNGAGLAMAT 272
Query: 129 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFT 188
DT+ G N+ + G +E+V + ++++ D + + + I GGI
Sbjct: 273 MDTINHFG--GNPANFLDVGGGATKEKVTEAFKIIL----GDENVKGIFVNIFGGIMKCD 326
Query: 189 DVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPE 248
+A GI+ A++E E L + VR G N + G + + +E G+ +E P
Sbjct: 327 IIA---EGIVAAVKEVELTLP-----LVVRLEGTNVERG----KEILKESGLAIE---PA 371
Query: 249 ATMTGICKQAIDCIMSA 265
ATM ++ + + A
Sbjct: 372 ATMAEGAQKIVKLVKEA 388
>sp|A9KBQ4|SUCC_COXBN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=sucC PE=3 SV=1
Length = 390
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 23 DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLP 81
D +MG++ +F + D S +E+NP + +GE LD + +DD+A ++ +
Sbjct: 180 DIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSE---------- 229
Query: 82 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 141
+ +T+ H E + + + G I MV G G ++ D + G +
Sbjct: 230 LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDP 284
Query: 142 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRAL 201
N+ + G+ +E V + R+++ +D + + + I GGI +A +GII A+
Sbjct: 285 ANFLDVGGSATKERVTEAFRIIV----SDKNVKGILVNIFGGIVRCDLIA---DGIISAV 337
Query: 202 REKESKLKAARMHIFVRRGGPNYQTGLAKM 231
+E + + VR G N Q G K+
Sbjct: 338 KE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|B4U901|SUCC_HYDS0 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hydrogenobaculum
sp. (strain Y04AAS1) GN=sucC PE=3 SV=1
Length = 382
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 22 GDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKKWANIEF 78
G + ++ + DLD S +E+NP L +G+ LD + E+DD AAF K+ ++ +I
Sbjct: 174 GKIVSKLYQAYMDLDASLLEINPLVLTKDGDIVLLDAKVEIDDNAAFRHKDIEELEDITQ 233
Query: 79 PLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYA 138
P E + + +G I MV G G ++ D + G A
Sbjct: 234 IDPL---------------EVEAKKYGLNYIKLEGNIGCMVNGAGLAMTTMDIIKLAGGA 278
Query: 139 SELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGII 198
N+ + G + E++ R++ T+D + + + I GGI +A NG+I
Sbjct: 279 P--ANFLDVGGGASVEQIANAFRIL----TSDENVKAVFINIFGGILRCDRLA---NGLI 329
Query: 199 RALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLE 243
A +K+ ++ + VR G N + G R L +E G+ E
Sbjct: 330 EA-----AKIVNIKIPVVVRLEGTNVEEG----RKLLKESGLNFE 365
>sp|A9N8R8|SUCC_COXBR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=sucC PE=3 SV=1
Length = 390
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 23 DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLP 81
D +MG++ +F + D S +E+NP + +GE LD + +DD+A ++ +
Sbjct: 180 DIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSE---------- 229
Query: 82 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 141
+ +T+ H E + + + G I MV G G ++ D + G +
Sbjct: 230 LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDP 284
Query: 142 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRAL 201
N+ + G+ +E V + ++++ +D + + + I GGI +A +GII A+
Sbjct: 285 ANFLDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVRCDLIA---DGIISAV 337
Query: 202 REKESKLKAARMHIFVRRGGPNYQTGLAKM 231
+E + + VR G N Q G K+
Sbjct: 338 KE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|P53592|SUCC_COXBU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=sucC PE=3 SV=2
Length = 390
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 23 DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLP 81
D +MG++ +F + D S +E+NP + +GE LD + +DD+A ++ +
Sbjct: 180 DIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSE---------- 229
Query: 82 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 141
+ +T+ H E + + + G I MV G G ++ D + G +
Sbjct: 230 LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDP 284
Query: 142 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRAL 201
N+ + G+ +E V + ++++ +D + + + I GGI +A +GII A+
Sbjct: 285 ANFLDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVRCDLIA---DGIISAV 337
Query: 202 REKESKLKAARMHIFVRRGGPNYQTGLAKM 231
+E + + VR G N Q G K+
Sbjct: 338 KE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|B6IZ97|SUCC_COXB2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuG_Q212) GN=sucC PE=3 SV=1
Length = 390
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 23 DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLP 81
D +MG++ +F + D S +E+NP + +GE LD + +DD+A ++ +
Sbjct: 180 DIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSE---------- 229
Query: 82 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 141
+ +T+ H E + + + G I MV G G ++ D + G +
Sbjct: 230 LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDP 284
Query: 142 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRAL 201
N+ + G+ +E V + ++++ +D + + + I GGI +A +GII A+
Sbjct: 285 ANFLDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVRCDLIA---DGIISAV 337
Query: 202 REKESKLKAARMHIFVRRGGPNYQTGLAKM 231
+E + + VR G N Q G K+
Sbjct: 338 KE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|B2V8I4|SUCC_SULSY Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=sucC
PE=3 SV=1
Length = 389
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 32/231 (13%)
Query: 13 LPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFK 71
LP K ++ ++ +LD S +E+NP L +G LD + E DD F++
Sbjct: 169 LPKNLLNKAASIFTTLYKIYIELDASMVEINPLVLTKDGNIVILDAKIEFDDNGLFRH-P 227
Query: 72 KWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADT 131
+ ++ P + + F +L + L+ G I MV G G ++ DT
Sbjct: 228 EIMEMDDPTQISPLEVEAKKF----------NLNYIKLD--GNIACMVNGAGLAMSTMDT 275
Query: 132 VGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVA 191
+ G E N+ + G+ N ++ ++++ +DP+ + + I GGI +A
Sbjct: 276 IKLAG--GEPANFLDVGGSANATQIANAFKIIL----SDPNVKAIFINIFGGILRCDRLA 329
Query: 192 TTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPL 242
GII A +E + + + VR G N + G + + +E G+PL
Sbjct: 330 ---EGIITAAKE-----VSINVPVIVRMEGTNVELG----KKMLQESGLPL 368
>sp|B6J8N7|SUCC_COXB1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuK_Q154) GN=sucC PE=3 SV=1
Length = 390
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 23 DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLP 81
D +MG++ +F + D S +E+NP + +GE LD + +DD+A ++ +
Sbjct: 180 DIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSE---------- 229
Query: 82 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 141
+ +T+ H E + + + G I MV G G ++ D + G +
Sbjct: 230 LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDP 284
Query: 142 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRAL 201
N+ + G+ +E V + +++ +D + + + I GGI +A +GII A+
Sbjct: 285 ANFLDVGGSATKERVTEAFKII----ASDKNVKGILVNIFGGIVRCDLIA---DGIISAV 337
Query: 202 REKESKLKAARMHIFVRRGGPNYQTGLAKM 231
+E + + VR G N Q G K+
Sbjct: 338 KE-----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|A8ZRW7|SUCC_DESOH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfococcus
oleovorans (strain DSM 6200 / Hxd3) GN=sucC PE=3 SV=1
Length = 388
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 89/221 (40%), Gaps = 36/221 (16%)
Query: 12 TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPY-PLDMRGELDDTAAFKNF 70
LP E + G+F +F D D S +E+NP L + LD + DD+A F++
Sbjct: 168 NLPAEAIKPFTQVVSGLFKLFVDYDASLVEINPLILTTDKAVMALDAKINFDDSALFRHK 227
Query: 71 KKWA----NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASV 126
A + E PL E ++ +N G + MV G G ++
Sbjct: 228 DILALRDTDEEDPL-----------------EVEASRFNLNYINMDGNVGNMVNGAGLAM 270
Query: 127 IYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIAN 186
D + G +E N+ + G N E V R+++ +DP + + I GGI
Sbjct: 271 ATMDIIKLAG--AEPANFLDVGGGANAEMVENGFRIIL----SDPKVKCILVNIFGGILR 324
Query: 187 FTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 227
+A+ GI++A R A + + VR G N G
Sbjct: 325 CDVLAS---GIVQAARN-----TAIHVPLVVRMEGTNVDEG 357
>sp|A4IZC2|SUCC_FRATW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain WY96-3418) GN=sucC
PE=3 SV=1
Length = 387
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 40/212 (18%)
Query: 8 PLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL-VNGEPY 53
PL+ P + R +I DF+ +G + F + DF+ E+NP + NGE
Sbjct: 152 PLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIV 211
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 113
+D + LD A +++ K A + + L ++E H L+ + L KG
Sbjct: 212 CVDGKINLDSNALYRHPKLLALRDKSQENAKELKASE---HELN--------YVAL--KG 258
Query: 114 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 173
I MV G G ++ D + Y + N+ + G +E V++ ++++D D
Sbjct: 259 NIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DE 310
Query: 174 RKRALLIG--GGIANFTDVATTFNGIIRALRE 203
+A+LI GGI +A II A++E
Sbjct: 311 NVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|Q5X7K6|SUCC_LEGPA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Paris) GN=sucC PE=3 SV=1
Length = 387
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 51/239 (21%)
Query: 8 PLIATLPLEFRG---KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPY 53
PL+ +P + R K+G +MG+ +F D D S +E+NP + +G+
Sbjct: 151 PLVGVMPFQCRETAFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLI 210
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLN 110
LD + +D A F+ K L + D + AS L + L+
Sbjct: 211 CLDGKINIDGNALFRQPK--------------LKNMRDVSQEDDRENRASDWELNYIPLD 256
Query: 111 PKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD 170
G I MV G G ++ D + + E N+ + G +E V + ++++
Sbjct: 257 --GTIGCMVNGAGLAMATMDVIK--LHGGEPANFLDVGGGATKERVSEALKIIV------ 306
Query: 171 PDGRKRALLIG--GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 227
D + + +L+ GGI +A +GI+ A++E + K+ + VR G N Q G
Sbjct: 307 SDEKVKGILVNIFGGIVRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|Q5WZ04|SUCC_LEGPL Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Lens) GN=sucC PE=3 SV=1
Length = 387
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 51/239 (21%)
Query: 8 PLIATLPLEFRG---KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPY 53
PL+ +P + R K+G +MG+ +F D D S +E+NP + +G+
Sbjct: 151 PLVGVMPFQCRETAFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLI 210
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLN 110
LD + +D A F+ K L + D + AS L + L+
Sbjct: 211 CLDGKINIDGNALFRQPK--------------LKNMRDVSQEDDRENRASDWELNYIPLD 256
Query: 111 PKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD 170
G I MV G G ++ D + + E N+ + G +E V + ++++
Sbjct: 257 --GTIGCMVNGAGLAMATMDVIK--LHGGEPANFLDVGGGATKERVSEALKIIV------ 306
Query: 171 PDGRKRALLIG--GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 227
D + + +L+ GGI +A +GI+ A++E + K+ + VR G N Q G
Sbjct: 307 SDEKVKGILVNIFGGIVRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|A5IH21|SUCC_LEGPC Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Corby) GN=sucC PE=3 SV=1
Length = 387
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 51/239 (21%)
Query: 8 PLIATLPLEFRG---KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPY 53
PL+ +P + R K+G +MG+ +F D D S +E+NP + +G+
Sbjct: 151 PLVGVMPFQCRETAFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLI 210
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLN 110
LD + +D A F+ K L + D + AS L + L+
Sbjct: 211 CLDGKINIDGNALFRQPK--------------LKNMRDVSQEDDRENRASDWELNYIPLD 256
Query: 111 PKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAD 170
G I MV G G ++ D + + E N+ + G +E V + ++++
Sbjct: 257 --GTIGCMVNGAGLAMATMDVIK--LHGGEPANFLDVGGGATKERVSEALKIIV------ 306
Query: 171 PDGRKRALLIG--GGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 227
D + + +L+ GGI +A +GI+ A++E + K+ + VR G N Q G
Sbjct: 307 SDEKVKGILVNIFGGIVRCDLIA---DGILAAVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|Q2W063|SUCC_MAGSA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=sucC PE=3
SV=1
Length = 398
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 24 FIMGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPF 82
F+ ++ F DLD S +E+NP + GE LD + DD A F++ +IE
Sbjct: 189 FVGALYKAFMDLDCSIVEINPLVVTGAGELIALDAKVNFDDNALFRH----KDIE----- 239
Query: 83 GRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELG 142
+ +E L E SL + L+ G+I MV G G ++ D + Y +E
Sbjct: 240 -ELRDESEEDPAEL-EAARHSLNYIKLD--GQIGCMVNGAGLAMATMDIIKL--YGAEPA 293
Query: 143 NYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALR 202
N+ + G +E V ++++ +DP+ + I GGI +A G++ A R
Sbjct: 294 NFLDVGGGATKERVTTAFKLIL----SDPNVEGILVNIFGGIMRCDVIA---EGVVAAAR 346
Query: 203 EKESKLKAARMHIFVRRGGPNYQTGLAKMRALG 235
E + + + VR G N + G M G
Sbjct: 347 E-----VSLNVPLVVRLEGTNVELGKKIMAQSG 374
>sp|Q5NHF3|SUCC_FRATT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
GN=sucC PE=3 SV=1
Length = 387
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 8 PLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL-VNGEPY 53
PL+ P + R +I DF+ +G + F + DF+ E+NP + NGE
Sbjct: 152 PLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIV 211
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 113
+D + LD A +++ K A + + L ++E L + L +G
Sbjct: 212 CVDGKINLDSNALYRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EG 258
Query: 114 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 173
I MV G G ++ D + Y + N+ + G +E V++ ++++D D
Sbjct: 259 NIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DE 310
Query: 174 RKRALLIG--GGIANFTDVATTFNGIIRALRE 203
+A+LI GGI +A II A++E
Sbjct: 311 NVKAILINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|Q14IV5|SUCC_FRAT1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain FSC 198) GN=sucC
PE=3 SV=1
Length = 387
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 8 PLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL-VNGEPY 53
PL+ P + R +I DF+ +G + F + DF+ E+NP + NGE
Sbjct: 152 PLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIV 211
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 113
+D + LD A +++ K A + + L ++E L + L +G
Sbjct: 212 CVDGKINLDSNALYRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EG 258
Query: 114 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 173
I MV G G ++ D + Y + N+ + G +E V++ ++++D D
Sbjct: 259 NIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DE 310
Query: 174 RKRALLIG--GGIANFTDVATTFNGIIRALRE 203
+A+LI GGI +A II A++E
Sbjct: 311 NVKAILINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|C5D8V2|SUCC_GEOSW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus sp.
(strain WCH70) GN=sucC PE=3 SV=1
Length = 386
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 12 TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--K 68
+P E + F+MG++ VF D D S E+NP + +G+ LD + D A + K
Sbjct: 168 NIPKELVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHK 227
Query: 69 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 128
+ ++ +++ P E + L + L+ G I MV G G ++
Sbjct: 228 DILEYRDLDEEDP-------------KEVEASKYDLNYIALD--GNIGCMVNGAGLAMAT 272
Query: 129 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFT 188
D + Y E N+ + G E+V + ++++ +DP+ + + I GGI
Sbjct: 273 MDIIKY--YGGEPANFLDVGGGATAEKVTEAFKIIL----SDPNVKGIFVNIFGGIMKCD 326
Query: 189 DVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 227
+A+ GI+ A +K + + VR G N + G
Sbjct: 327 VIAS---GIVEA-----TKQVGLNLPLVVRLEGTNVELG 357
>sp|B0TZ23|SUCC_FRAP2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
philomiragia subsp. philomiragia (strain ATCC 25017)
GN=sucC PE=3 SV=1
Length = 387
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 8 PLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL-VNGEPY 53
PL+ P + R +I DF+ +G + F + DF+ E+NP + NGE
Sbjct: 152 PLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFVECDFALFEINPLAVRENGEIV 211
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 113
+D + LD A +++ K A + + L ++E L + L +G
Sbjct: 212 CVDGKINLDSNALYRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EG 258
Query: 114 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 173
I MV G G ++ D + Y + N+ + G +E V++ ++++D D
Sbjct: 259 NIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DE 310
Query: 174 RKRALLIG--GGIANFTDVATTFNGIIRALRE 203
+A+LI GGI +A II A++E
Sbjct: 311 NVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|Q0BKS4|SUCC_FRATO Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. holarctica (strain OSU18) GN=sucC PE=3
SV=1
Length = 387
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 8 PLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL-VNGEPY 53
PL+ P + R +I DF+ +G + F + DF+ E+NP + NGE
Sbjct: 152 PLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIV 211
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 113
+D + LD A +++ K A + + L ++E L + L +G
Sbjct: 212 CVDGKINLDSNALYRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EG 258
Query: 114 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 173
I MV G G ++ D + Y + N+ + G +E V++ ++++D D
Sbjct: 259 NIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DE 310
Query: 174 RKRALLIG--GGIANFTDVATTFNGIIRALRE 203
+A+LI GGI +A II A++E
Sbjct: 311 NVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|Q2A253|SUCC_FRATH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. holarctica (strain LVS) GN=sucC PE=3
SV=1
Length = 387
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 8 PLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL-VNGEPY 53
PL+ P + R +I DF+ +G + F + DF+ E+NP + NGE
Sbjct: 152 PLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIV 211
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 113
+D + LD A +++ K A + + L ++E L + L +G
Sbjct: 212 CVDGKINLDSNALYRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EG 258
Query: 114 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 173
I MV G G ++ D + Y + N+ + G +E V++ ++++D D
Sbjct: 259 NIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DE 310
Query: 174 RKRALLIG--GGIANFTDVATTFNGIIRALRE 203
+A+LI GGI +A II A++E
Sbjct: 311 NVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|A7NDR1|SUCC_FRATF Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. holarctica (strain FTNF002-00 / FTA)
GN=sucC PE=3 SV=1
Length = 387
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 8 PLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL-VNGEPY 53
PL+ P + R +I DF+ +G + F + DF+ E+NP + NGE
Sbjct: 152 PLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIV 211
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 113
+D + LD A +++ K A + + L ++E L + L +G
Sbjct: 212 CVDGKINLDSNALYRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EG 258
Query: 114 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 173
I MV G G ++ D + Y + N+ + G +E V++ ++++D D
Sbjct: 259 NIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DE 310
Query: 174 RKRALLIG--GGIANFTDVATTFNGIIRALRE 203
+A+LI GGI +A II A++E
Sbjct: 311 NVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|Q9KY56|SUCC1_STRCO Succinyl-CoA ligase [ADP-forming] subunit beta-1 OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=sucC1
PE=3 SV=1
Length = 394
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 11 ATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFT-LVNGEPYPLDMRGELDDTAAFKN 69
A P E K+ D ++ ++ F D +E+NP +V+G+ LD + LDD A F++
Sbjct: 160 AKFPAEVADKVADILVKLWDTFIKEDALLVEVNPLAKVVSGDVIALDGKVSLDDNAEFRH 219
Query: 70 FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYA 129
P L + +L + L+ G + + G GA ++ +
Sbjct: 220 -----------PDFEALHDKAAANPLEAAAKEKNLNYVKLD--GEVGII--GNGAGLVMS 264
Query: 130 DTVGDLGYASEL------GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGG 183
T+ + YA E N+ + G + + + +++ DPD R + + GG
Sbjct: 265 -TLDVVAYAGEAHGNVKPANFLDIGGGASAQVMANGLEIIL----GDPDVRSVFVNVFGG 319
Query: 184 IANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 227
I +VA NGI++AL+ E + + + VR G N + G
Sbjct: 320 ITACDEVA---NGIVQALKLLEDRGEKVEKPLVVRLDGNNAELG 360
>sp|A0Q5H4|SUCC_FRATN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. novicida (strain U112) GN=sucC PE=3
SV=1
Length = 387
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 8 PLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL-VNGEPY 53
PL+ P + R +I DF+ +G + F + DF+ E+NP + NGE
Sbjct: 152 PLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIV 211
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 113
+D + LD A +++ K A + + L ++E L + L +G
Sbjct: 212 CVDGKINLDSNALYRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EG 258
Query: 114 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 173
I MV G G ++ D + Y + N+ + G +E V++ ++++D D
Sbjct: 259 NIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DE 310
Query: 174 RKRALLIG--GGIANFTDVATTFNGIIRALRE 203
+A+LI GGI +A II A++E
Sbjct: 311 NVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|B2SDM1|SUCC_FRATM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. mediasiatica (strain FSC147) GN=sucC
PE=3 SV=1
Length = 387
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 40/212 (18%)
Query: 8 PLIATLPLEFR----------GKIGDFI---MGVFAVFQDLDFSFIEMNPFTL-VNGEPY 53
PL+ P + R +I DF+ +G + F + DF+ E+NP + NGE
Sbjct: 152 PLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFIECDFALFEINPLAVRENGEIV 211
Query: 54 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKG 113
+D + LD A +++ K A + + L ++E L + L +G
Sbjct: 212 CVDGKINLDSNALYRHPKLLALRDKSQENAKELKASEH-----------ELNYVAL--EG 258
Query: 114 RIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDG 173
I MV G G ++ D + Y + N+ + G +E V++ ++++D D
Sbjct: 259 NIGCMVNGAGLAMATMDIIQL--YGGKPANFLDVGGGATKERVIEAFKLILD------DE 310
Query: 174 RKRALLIG--GGIANFTDVATTFNGIIRALRE 203
+A+LI GGI +A II A++E
Sbjct: 311 NVKAVLINIFGGIVRCDMIAEA---IIEAVKE 339
>sp|A4IM83|SUCC_GEOTN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=sucC PE=3 SV=1
Length = 386
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 12 TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK-- 68
+P + + F+MG++ VF D D S E+NP + +G+ LD + D A ++
Sbjct: 168 NIPKKLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHP 227
Query: 69 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 128
+ ++ +++ P E + L + L+ G I MV G G ++
Sbjct: 228 DIMEYRDLDEEDP-------------KEVEASKYDLNYIALD--GNIGCMVNGAGLAMAT 272
Query: 129 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFT 188
D + Y E N+ + G +EE+V + ++++ +DP+ + + I GGI
Sbjct: 273 MDIIKY--YGGEPANFLDVGGGASEEKVTEAFKIIL----SDPNVKGIFVNIFGGIMKCD 326
Query: 189 DVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 227
+A+ GI+ A +K + + VR G N + G
Sbjct: 327 VIAS---GIVAA-----TKQVGLTLPLVVRLEGTNVELG 357
>sp|Q1IZE7|SUCC_DEIGD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Deinococcus
geothermalis (strain DSM 11300) GN=sucC PE=3 SV=1
Length = 385
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 17 FRG---KIGDFIMGVFAVFQDLDFSFIEMNP-FTLVNGEPYPLDMRGELDDTAAF--KNF 70
F+G KI D ++ + +D +E+NP F +G P LD + E+DD A + K+
Sbjct: 163 FKGNLNKIADMMVKMSEAALKMDAVLVEINPLFVDESGTPLALDTKFEIDDNAMYRHKDL 222
Query: 71 KKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYAD 130
+W +E P E ++ F + G + + G G + D
Sbjct: 223 AEWRELEAEHPL---------------EIEASKYGFAYVKLDGNVGVLGNGAGIVMTSLD 267
Query: 131 TVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDV 190
V G ++ N+ + G + V ++V + DPD + + I GGI +V
Sbjct: 268 VVNRAG--AKPANFLDIGGGARADIVYNAVKLV----SKDPDVKSIFVNIFGGITRADEV 321
Query: 191 ATTFNGIIRALRE 203
A GII+AL E
Sbjct: 322 A---KGIIQALNE 331
>sp|C1F2F2|SUCC_ACIC5 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidobacterium
capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
GN=sucC PE=3 SV=1
Length = 391
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 38/210 (18%)
Query: 24 FIMGVFAVFQDLDFSFIEMNPF-TLVNGEPYPLDMRGELDDTAAF--KNFKKWANI--EF 78
F+MG++ + D D S +E+NPF T + + + LD + DD A F K+ K+ +I E
Sbjct: 183 FMMGLYKAYMDTDASLLEINPFITTKDDKLFALDCKINFDDNAMFRHKDLKELRDIAEED 242
Query: 79 PLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYA 138
PL E + +L + L+ G I MV G G ++ D + YA
Sbjct: 243 PLEV---------------EASKYALNYIKLD--GNIACMVNGAGLAMATMDII---QYA 282
Query: 139 SEL-GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGI 197
+ N+ + G N++++ +++ +D + + + I GGI V T +G+
Sbjct: 283 GGMPANFLDVGGGANQQQIEHAFEILL----SDKNVQAVFINIFGGILR---VDTLAHGV 335
Query: 198 IRALREKESKLKAARMHIFVRRGGPNYQTG 227
+ A ++ K+ I +R G N + G
Sbjct: 336 VGAAQKLNVKVP-----IVLRLEGTNVEEG 360
>sp|Q8P676|SUCC_XANCP Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=sucC PE=3 SV=1
Length = 389
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 19 GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIE 77
G+ ++ ++ +F D D + +E+NP ++ +G Y LD + + DD AAF+
Sbjct: 175 GQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------- 226
Query: 78 FPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGY 137
+++ + E T++ L + G I MV G G ++ D + G
Sbjct: 227 -----KALVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG- 280
Query: 138 ASELGNYAEYSGAPNEEEVLQYARVVI 164
E N+ + G N++ V++ ++++
Sbjct: 281 -GEPANFLDVGGGANKQRVIEAFKLIL 306
>sp|Q4UXU0|SUCC_XANC8 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
campestris pv. campestris (strain 8004) GN=sucC PE=3
SV=1
Length = 389
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 19 GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIE 77
G+ ++ ++ +F D D + +E+NP ++ +G Y LD + + DD AAF+
Sbjct: 175 GQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------- 226
Query: 78 FPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGY 137
+++ + E T++ L + G I MV G G ++ D + G
Sbjct: 227 -----KALVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG- 280
Query: 138 ASELGNYAEYSGAPNEEEVLQYARVVI 164
E N+ + G N++ V++ ++++
Sbjct: 281 -GEPANFLDVGGGANKQRVIEAFKLIL 306
>sp|B0RPQ9|SUCC_XANCB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
campestris pv. campestris (strain B100) GN=sucC PE=3
SV=1
Length = 389
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 19 GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIE 77
G+ ++ ++ +F D D + +E+NP ++ +G Y LD + + DD AAF+
Sbjct: 175 GQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------- 226
Query: 78 FPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGY 137
+++ + E T++ L + G I MV G G ++ D + G
Sbjct: 227 -----KALVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG- 280
Query: 138 ASELGNYAEYSGAPNEEEVLQYARVVI 164
E N+ + G N++ V++ ++++
Sbjct: 281 -GEPANFLDVGGGANKQRVIEAFKLIL 306
>sp|Q9YI36|SUCB2_COLLI Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
(Fragment) OS=Columba livia GN=SUCLG2 PE=1 SV=1
Length = 391
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 17 FRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWAN 75
+ + D I ++ +F +D + +E+NPF G+ D + DD A F+ + +A
Sbjct: 176 LQQQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIFAM 235
Query: 76 IEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDL 135
+ S I +E LK+ L+ G I V G G ++ D +
Sbjct: 236 DD---------KSENEPIE--NEAAKYDLKYIGLD--GNIACFVNGAGLAMATCDIISLN 282
Query: 136 GYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFN 195
G + N+ + G E +V Q +++ TADP + I GGI N +A N
Sbjct: 283 G--GKPANFLDLGGGVKEAQVYQAFKLL----TADPKVEAILVNIFGGIVNCAIIA---N 333
Query: 196 GIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPL 242
GI RA RE E K+ + VR G N R L E G+P+
Sbjct: 334 GITRACRELELKVP-----LVVRLEGTNVHEA---QRILNES-GLPI 371
>sp|Q5L0N7|SUCC_GEOKA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus
kaustophilus (strain HTA426) GN=sucC PE=3 SV=1
Length = 386
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 32/219 (14%)
Query: 12 TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK-- 68
+P + F+MG++ VF D D S E+NP + +G+ LD + D A ++
Sbjct: 168 NIPKHLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHP 227
Query: 69 NFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIY 128
+ ++ +++ P E + L + L+ G I MV G G ++
Sbjct: 228 DILEYRDLDEEDP-------------KEVEASKYDLNYIALD--GNIGCMVNGAGLAMAT 272
Query: 129 ADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFT 188
D + Y E N+ + G +EE+V + ++++ +DP+ + + I GGI
Sbjct: 273 MDIIKY--YGGEPANFLDVGGGASEEKVREAFKIIL----SDPNVKGIFVNIFGGIMKCD 326
Query: 189 DVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTG 227
+A+ GI+ A +K + + VR G N + G
Sbjct: 327 VIAS---GIVAA-----TKQVGLTLPLVVRLEGTNVELG 357
>sp|B8FLW6|SUCC_DESAA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfatibacillum
alkenivorans (strain AK-01) GN=sucC PE=3 SV=1
Length = 386
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 32/207 (15%)
Query: 24 FIMGVFAVFQDLDFSFIEMNPFTLVNGEP-YPLDMRGELDDTAAF--KNFKKWANIEFPL 80
+ G++ +F D D S +E+NP L + LD + DD+A + K+ +++ +++
Sbjct: 180 MVQGLYKMFMDTDCSLLEINPLVLTGDDGIIALDAKINFDDSALYRHKDIQEYRDLDEEE 239
Query: 81 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 140
P E ++ + G + MV G G ++ D + G +E
Sbjct: 240 PL---------------EVEASKFNLNYIKMDGNVGNMVNGAGLAMATMDIIKQAG--AE 282
Query: 141 LGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRA 200
N+ + G N E+V R+++ +D + + + I GGI +A+ G++ A
Sbjct: 283 PANFLDVGGGANAEQVENGFRIIL----SDKNVKGILINIFGGILRCDVLAS---GVVEA 335
Query: 201 LREKESKLKAARMHIFVRRGGPNYQTG 227
+K + + VR G N + G
Sbjct: 336 -----AKKVGLNVPVVVRMEGTNVEEG 357
>sp|Q5H2H4|SUCC_XANOR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
oryzae pv. oryzae (strain KACC10331 / KXO85) GN=sucC
PE=3 SV=1
Length = 389
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 19 GKIGDFIMGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIE 77
G+ ++ ++ +F + D + +E+NP +++ G Y LD + + DD AAF+
Sbjct: 175 GQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------- 226
Query: 78 FPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGY 137
++++ + E T++ L + G I MV G G ++ D + G
Sbjct: 227 -----KQLVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG- 280
Query: 138 ASELGNYAEYSGAPNEEEVLQYARVVI 164
E N+ + G N++ V++ ++++
Sbjct: 281 -GEPANFLDVGGGANKQRVIEAFKLIL 306
>sp|B2ST87|SUCC_XANOP Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
oryzae pv. oryzae (strain PXO99A) GN=sucC PE=3 SV=1
Length = 389
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 19 GKIGDFIMGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIE 77
G+ ++ ++ +F + D + +E+NP +++ G Y LD + + DD AAF+
Sbjct: 175 GQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------- 226
Query: 78 FPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGY 137
++++ + E T++ L + G I MV G G ++ D + G
Sbjct: 227 -----KQLVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG- 280
Query: 138 ASELGNYAEYSGAPNEEEVLQYARVVI 164
E N+ + G N++ V++ ++++
Sbjct: 281 -GEPANFLDVGGGANKQRVIEAFKLIL 306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,176,777
Number of Sequences: 539616
Number of extensions: 4409088
Number of successful extensions: 10445
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 259
Number of HSP's that attempted gapping in prelim test: 10408
Number of HSP's gapped (non-prelim): 277
length of query: 266
length of database: 191,569,459
effective HSP length: 115
effective length of query: 151
effective length of database: 129,513,619
effective search space: 19556556469
effective search space used: 19556556469
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)