Query 024564
Match_columns 266
No_of_seqs 231 out of 1981
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 05:35:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024564.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024564hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.4E-71 3.1E-76 466.6 18.7 253 13-265 2-254 (303)
2 KOG0373 Serine/threonine speci 100.0 2.4E-65 5.1E-70 423.3 16.5 254 12-265 4-258 (306)
3 cd07420 MPP_RdgC Drosophila me 100.0 1.7E-63 3.7E-68 446.3 27.6 257 8-265 1-292 (321)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 5.9E-63 1.3E-67 438.3 26.5 252 14-265 2-253 (285)
5 PTZ00239 serine/threonine prot 100.0 4.7E-62 1E-66 435.0 26.9 253 13-265 2-255 (303)
6 PTZ00480 serine/threonine-prot 100.0 1.8E-61 3.8E-66 432.8 26.0 257 8-265 5-270 (320)
7 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.3E-60 2.8E-65 428.4 26.6 263 2-265 3-272 (316)
8 cd07416 MPP_PP2B PP2B, metallo 100.0 2.3E-60 4.9E-65 425.8 27.7 252 13-265 2-267 (305)
9 PTZ00244 serine/threonine-prot 100.0 1.9E-60 4.2E-65 423.3 25.5 251 14-265 4-263 (294)
10 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 2.1E-60 4.5E-65 423.6 24.6 251 14-265 2-261 (293)
11 smart00156 PP2Ac Protein phosp 100.0 4.6E-59 1E-63 411.7 25.3 238 27-265 1-239 (271)
12 KOG0371 Serine/threonine prote 100.0 8.8E-60 1.9E-64 397.9 15.2 266 1-266 7-272 (319)
13 cd07418 MPP_PP7 PP7, metalloph 100.0 1.3E-57 2.9E-62 414.1 27.9 259 7-265 5-327 (377)
14 KOG0374 Serine/threonine speci 100.0 5.8E-58 1.2E-62 411.4 21.9 240 26-265 31-272 (331)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 2.6E-56 5.6E-61 401.1 25.1 241 25-265 19-281 (311)
16 KOG0375 Serine-threonine phosp 100.0 7.2E-54 1.6E-58 376.3 15.1 248 9-257 43-298 (517)
17 KOG0377 Protein serine/threoni 100.0 4.6E-49 9.9E-54 353.3 13.8 263 2-265 109-401 (631)
18 KOG0376 Serine-threonine phosp 100.0 8.9E-40 1.9E-44 298.7 10.7 256 9-265 165-426 (476)
19 cd00144 MPP_PPP_family phospho 100.0 8.9E-35 1.9E-39 250.0 20.6 198 57-265 1-208 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 7.4E-29 1.6E-33 216.6 17.6 123 54-178 1-146 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 1.9E-28 4.1E-33 209.0 14.5 175 57-265 1-195 (208)
22 cd07413 MPP_PA3087 Pseudomonas 100.0 1.9E-27 4E-32 204.9 16.4 116 57-175 2-143 (222)
23 PHA02239 putative protein phos 99.9 3.5E-27 7.5E-32 204.4 16.0 138 54-207 1-184 (235)
24 PRK00166 apaH diadenosine tetr 99.9 2.2E-27 4.8E-32 209.8 13.8 125 54-182 1-131 (275)
25 cd07421 MPP_Rhilphs Rhilph pho 99.9 9.9E-27 2.1E-31 204.6 16.0 148 55-207 3-242 (304)
26 cd07423 MPP_PrpE Bacillus subt 99.9 3.4E-27 7.5E-32 204.8 12.4 123 54-178 1-143 (234)
27 TIGR00668 apaH bis(5'-nucleosy 99.9 5E-27 1.1E-31 206.2 10.5 128 54-185 1-134 (279)
28 cd07422 MPP_ApaH Escherichia c 99.9 8.2E-27 1.8E-31 204.2 11.6 123 56-182 1-129 (257)
29 PRK11439 pphA serine/threonine 99.9 2.1E-26 4.5E-31 197.9 11.6 117 53-175 16-146 (218)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 1.7E-24 3.7E-29 184.5 12.5 119 54-178 1-133 (207)
31 PRK09968 serine/threonine-spec 99.9 5.1E-23 1.1E-27 176.8 11.2 117 53-175 14-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 1.3E-12 2.8E-17 104.2 12.6 159 55-248 2-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.2 1.6E-10 3.5E-15 93.5 11.1 59 55-125 1-59 (155)
34 TIGR00040 yfcE phosphoesterase 99.2 1.4E-10 2.9E-15 94.6 9.8 63 54-125 1-64 (158)
35 PF12850 Metallophos_2: Calcin 99.1 2.6E-10 5.7E-15 91.7 8.9 124 54-252 1-124 (156)
36 PRK09453 phosphodiesterase; Pr 99.1 7.9E-11 1.7E-15 98.3 5.9 69 54-126 1-77 (182)
37 cd07379 MPP_239FB Homo sapiens 99.1 6.1E-10 1.3E-14 88.3 10.1 119 55-254 1-121 (135)
38 cd07397 MPP_DevT Myxococcus xa 99.1 1E-09 2.2E-14 95.0 11.2 113 55-177 2-160 (238)
39 cd00838 MPP_superfamily metall 98.9 2.6E-08 5.6E-13 76.5 10.5 117 57-253 1-119 (131)
40 cd07388 MPP_Tt1561 Thermus the 98.8 9.2E-09 2E-13 88.6 7.0 71 54-125 5-75 (224)
41 cd07392 MPP_PAE1087 Pyrobaculu 98.8 1.1E-07 2.3E-12 78.8 13.2 65 56-126 1-66 (188)
42 cd07394 MPP_Vps29 Homo sapiens 98.7 9.3E-08 2E-12 79.7 10.5 59 55-125 1-65 (178)
43 PRK05340 UDP-2,3-diacylglucosa 98.7 2.3E-08 4.9E-13 87.2 5.6 71 54-126 1-84 (241)
44 cd07403 MPP_TTHA0053 Thermus t 98.6 5.9E-07 1.3E-11 70.9 11.6 107 57-253 1-107 (129)
45 cd07400 MPP_YydB Bacillus subt 98.5 2.5E-06 5.4E-11 67.9 11.9 118 56-254 1-130 (144)
46 PRK11340 phosphodiesterase Yae 98.4 3.6E-07 7.8E-12 81.0 6.5 71 53-125 49-125 (271)
47 cd07385 MPP_YkuE_C Bacillus su 98.4 2.8E-07 6.1E-12 78.7 5.2 71 54-126 2-77 (223)
48 COG0639 ApaH Diadenosine tetra 98.4 4E-07 8.7E-12 71.7 5.7 130 128-258 4-142 (155)
49 cd07399 MPP_YvnB Bacillus subt 98.4 3.5E-06 7.7E-11 72.1 10.6 162 55-265 2-181 (214)
50 cd07404 MPP_MS158 Microscilla 98.4 3.1E-07 6.8E-12 75.1 3.7 67 56-125 1-68 (166)
51 TIGR03729 acc_ester putative p 98.2 2.5E-06 5.5E-11 74.1 6.1 68 55-125 1-74 (239)
52 cd07383 MPP_Dcr2 Saccharomyces 98.1 4.8E-05 1E-09 64.1 12.3 70 54-123 3-87 (199)
53 COG0622 Predicted phosphoester 98.1 3E-05 6.4E-10 64.2 10.3 65 54-126 2-66 (172)
54 TIGR00619 sbcd exonuclease Sbc 98.1 7.6E-06 1.7E-10 71.9 6.8 72 54-125 1-88 (253)
55 cd07396 MPP_Nbla03831 Homo sap 98.1 1.1E-05 2.4E-10 71.3 7.1 72 55-126 2-87 (267)
56 PRK04036 DNA polymerase II sma 98.0 1.6E-05 3.5E-10 76.5 7.5 73 52-126 242-344 (504)
57 PHA02546 47 endonuclease subun 98.0 1.5E-05 3.2E-10 73.1 6.6 72 54-125 1-89 (340)
58 TIGR01854 lipid_A_lpxH UDP-2,3 98.0 1.5E-05 3.3E-10 68.9 6.1 68 56-125 1-81 (231)
59 cd07402 MPP_GpdQ Enterobacter 97.9 3.3E-05 7.3E-10 66.6 7.2 67 55-125 1-83 (240)
60 cd08165 MPP_MPPE1 human MPPE1 97.9 8.8E-05 1.9E-09 60.4 9.2 48 79-126 37-90 (156)
61 cd07395 MPP_CSTP1 Homo sapiens 97.9 0.00026 5.7E-09 62.1 12.9 71 55-125 6-99 (262)
62 cd00840 MPP_Mre11_N Mre11 nucl 97.8 3E-05 6.4E-10 65.9 5.9 72 55-127 1-91 (223)
63 cd07391 MPP_PF1019 Pyrococcus 97.8 6.5E-05 1.4E-09 62.0 7.6 58 69-126 30-89 (172)
64 PRK11148 cyclic 3',5'-adenosin 97.8 4.7E-05 1E-09 67.6 6.3 71 53-125 14-98 (275)
65 cd07390 MPP_AQ1575 Aquifex aeo 97.8 3.5E-05 7.6E-10 63.4 5.0 67 56-127 1-84 (168)
66 cd07401 MPP_TMEM62_N Homo sapi 97.8 0.00048 1E-08 60.6 12.3 70 56-125 2-89 (256)
67 COG2129 Predicted phosphoester 97.7 0.00072 1.6E-08 57.7 11.5 75 53-128 3-80 (226)
68 TIGR00024 SbcD_rel_arch putati 97.7 0.00012 2.7E-09 63.2 7.0 69 54-126 15-103 (225)
69 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.7 0.00012 2.6E-09 64.7 7.0 70 56-125 1-86 (262)
70 cd07393 MPP_DR1119 Deinococcus 97.6 0.00012 2.6E-09 63.4 6.4 66 56-125 1-84 (232)
71 TIGR00583 mre11 DNA repair pro 97.6 0.00015 3.4E-09 67.8 7.2 55 53-107 3-69 (405)
72 COG1409 Icc Predicted phosphoh 97.6 0.00028 6E-09 62.2 7.7 74 54-129 1-82 (301)
73 cd07398 MPP_YbbF-LpxH Escheric 97.5 0.00025 5.4E-09 60.2 6.3 29 225-253 177-205 (217)
74 PRK10966 exonuclease subunit S 97.5 0.00019 4.2E-09 67.3 5.9 71 54-125 1-87 (407)
75 COG1408 Predicted phosphohydro 97.5 0.00021 4.6E-09 63.8 5.6 73 53-127 44-120 (284)
76 cd07386 MPP_DNA_pol_II_small_a 97.4 0.0002 4.4E-09 62.3 4.9 68 57-126 2-95 (243)
77 cd00839 MPP_PAPs purple acid p 97.3 0.00021 4.5E-09 63.7 4.0 69 54-126 5-82 (294)
78 COG2908 Uncharacterized protei 97.2 0.0023 5E-08 55.2 9.0 175 57-254 1-204 (237)
79 cd08163 MPP_Cdc1 Saccharomyces 97.1 0.026 5.7E-07 49.7 14.9 33 223-257 202-234 (257)
80 cd08166 MPP_Cdc1_like_1 unchar 97.0 0.0012 2.6E-08 55.7 5.5 47 79-125 41-93 (195)
81 PF08321 PPP5: PPP5 TPR repeat 97.0 0.0013 2.8E-08 49.0 4.7 51 2-52 44-95 (95)
82 PF14582 Metallophos_3: Metall 97.0 0.00053 1.1E-08 58.7 2.9 74 53-127 5-104 (255)
83 cd07384 MPP_Cdc1_like Saccharo 97.0 0.002 4.2E-08 53.3 6.0 49 78-126 43-101 (171)
84 COG4186 Predicted phosphoester 96.9 0.0022 4.7E-08 51.8 5.7 67 55-125 5-86 (186)
85 cd00845 MPP_UshA_N_like Escher 96.9 0.0013 2.9E-08 57.2 4.7 66 55-125 2-82 (252)
86 cd07380 MPP_CWF19_N Schizosacc 96.9 0.0022 4.8E-08 51.9 5.6 66 57-123 1-68 (150)
87 COG0420 SbcD DNA repair exonuc 96.8 0.0035 7.6E-08 58.4 6.9 73 54-126 1-89 (390)
88 COG1407 Predicted ICC-like pho 96.6 0.0042 9.2E-08 53.7 5.9 103 52-178 18-142 (235)
89 PLN02533 probable purple acid 96.4 0.0036 7.9E-08 59.1 4.5 71 53-126 139-212 (427)
90 cd07410 MPP_CpdB_N Escherichia 96.3 0.0043 9.4E-08 55.0 4.1 66 55-125 2-95 (277)
91 cd08164 MPP_Ted1 Saccharomyces 95.9 0.022 4.7E-07 48.0 6.2 66 60-125 23-111 (193)
92 KOG0376 Serine-threonine phosp 95.8 0.0042 9.1E-08 58.4 1.8 115 26-141 14-132 (476)
93 cd07378 MPP_ACP5 Homo sapiens 95.6 0.024 5.1E-07 50.0 5.6 69 55-125 2-83 (277)
94 cd07408 MPP_SA0022_N Staphyloc 95.4 0.019 4E-07 50.4 4.2 65 55-124 2-81 (257)
95 cd07412 MPP_YhcR_N Bacillus su 95.1 0.034 7.3E-07 49.7 4.8 66 55-125 2-88 (288)
96 PF06874 FBPase_2: Firmicute f 95.0 0.023 5.1E-07 55.2 3.6 44 81-129 185-228 (640)
97 KOG3325 Membrane coat complex 94.5 0.21 4.5E-06 40.1 7.4 116 56-254 3-124 (183)
98 cd07411 MPP_SoxB_N Thermus the 94.5 0.05 1.1E-06 47.9 4.4 65 55-125 2-95 (264)
99 cd07409 MPP_CD73_N CD73 ecto-5 94.3 0.079 1.7E-06 47.2 5.2 66 55-125 2-94 (281)
100 COG1768 Predicted phosphohydro 94.0 0.089 1.9E-06 43.7 4.5 43 80-126 43-87 (230)
101 cd00842 MPP_ASMase acid sphing 93.5 0.12 2.5E-06 46.2 4.7 73 55-127 39-124 (296)
102 PRK09419 bifunctional 2',3'-cy 93.4 0.08 1.7E-06 56.2 4.2 66 54-124 661-735 (1163)
103 COG1311 HYS2 Archaeal DNA poly 93.3 0.61 1.3E-05 44.3 9.4 180 55-265 227-445 (481)
104 cd07406 MPP_CG11883_N Drosophi 93.2 0.14 3E-06 45.0 4.6 64 56-124 3-82 (257)
105 KOG3662 Cell division control 92.9 0.18 3.8E-06 47.2 5.0 47 80-126 93-145 (410)
106 KOG2863 RNA lariat debranching 92.5 0.37 8E-06 44.1 6.3 73 54-126 1-89 (456)
107 TIGR00282 metallophosphoestera 92.0 0.26 5.6E-06 43.7 4.9 67 54-125 1-71 (266)
108 KOG1432 Predicted DNA repair e 92.0 0.33 7.1E-06 44.2 5.5 70 55-125 55-147 (379)
109 cd07405 MPP_UshA_N Escherichia 91.8 0.16 3.6E-06 45.3 3.4 66 55-125 2-87 (285)
110 COG0737 UshA 5'-nucleotidase/2 89.9 0.32 7E-06 47.1 3.8 69 53-126 26-116 (517)
111 cd08162 MPP_PhoA_N Synechococc 89.8 0.42 9.2E-06 43.3 4.1 65 55-124 2-90 (313)
112 cd07382 MPP_DR1281 Deinococcus 89.5 0.69 1.5E-05 40.7 5.1 66 55-125 1-70 (255)
113 cd07407 MPP_YHR202W_N Saccharo 88.8 0.41 8.9E-06 42.7 3.3 66 55-125 7-97 (282)
114 PF04042 DNA_pol_E_B: DNA poly 88.1 0.77 1.7E-05 38.7 4.4 72 56-127 1-93 (209)
115 TIGR01390 CycNucDiestase 2',3' 87.6 0.58 1.3E-05 46.5 3.8 66 54-124 3-98 (626)
116 PRK09420 cpdB bifunctional 2', 87.5 0.64 1.4E-05 46.4 4.0 68 52-124 24-121 (649)
117 PRK09419 bifunctional 2',3'-cy 87.0 0.63 1.4E-05 49.6 3.9 67 53-124 41-138 (1163)
118 COG3855 Fbp Uncharacterized pr 87.0 0.37 8E-06 45.5 1.9 42 81-127 191-232 (648)
119 KOG2476 Uncharacterized conser 86.1 1.5 3.3E-05 41.4 5.4 69 53-122 5-75 (528)
120 PRK11907 bifunctional 2',3'-cy 83.6 1.3 2.9E-05 45.2 4.2 67 53-124 115-212 (814)
121 KOG3339 Predicted glycosyltran 83.6 17 0.00038 30.4 9.9 85 82-172 40-140 (211)
122 PTZ00422 glideosome-associated 83.2 1.8 3.8E-05 40.6 4.5 71 53-125 26-109 (394)
123 TIGR01530 nadN NAD pyrophospha 82.5 1.9 4.2E-05 42.2 4.7 65 56-125 3-94 (550)
124 PRK09558 ushA bifunctional UDP 81.9 1.2 2.6E-05 43.5 3.0 68 53-125 34-121 (551)
125 KOG3947 Phosphoesterases [Gene 80.8 2.5 5.4E-05 37.5 4.3 66 54-127 62-128 (305)
126 PTZ00235 DNA polymerase epsilo 80.6 4.9 0.00011 36.0 6.1 74 53-126 27-123 (291)
127 KOG1378 Purple acid phosphatas 78.2 2.3 5E-05 40.3 3.5 33 228-260 323-355 (452)
128 KOG2310 DNA repair exonuclease 77.3 6.1 0.00013 38.3 6.0 56 53-108 13-80 (646)
129 PRK09418 bifunctional 2',3'-cy 76.7 2.8 6.1E-05 42.8 3.8 67 53-124 39-141 (780)
130 cd07387 MPP_PolD2_C PolD2 (DNA 74.5 7.3 0.00016 34.4 5.4 15 114-128 96-110 (257)
131 KOG2679 Purple (tartrate-resis 67.8 2.8 6.1E-05 37.2 1.3 69 53-125 43-126 (336)
132 PF06874 FBPase_2: Firmicute f 67.3 4.9 0.00011 39.6 2.9 39 225-263 507-552 (640)
133 COG0634 Hpt Hypoxanthine-guani 52.4 1.4E+02 0.003 24.9 9.3 76 26-105 11-117 (178)
134 cd07382 MPP_DR1281 Deinococcus 52.0 17 0.00038 31.9 3.5 40 83-125 1-40 (255)
135 PF02875 Mur_ligase_C: Mur lig 49.4 46 0.001 23.7 5.0 68 54-121 12-81 (91)
136 PF12641 Flavodoxin_3: Flavodo 47.0 1.2E+02 0.0026 24.6 7.5 58 57-117 2-72 (160)
137 KOG3425 Uncharacterized conser 46.3 74 0.0016 24.8 5.7 60 66-125 12-79 (128)
138 PF13258 DUF4049: Domain of un 46.3 24 0.00052 30.8 3.3 88 81-176 85-186 (318)
139 TIGR00282 metallophosphoestera 45.0 17 0.00037 32.2 2.4 39 83-125 2-41 (266)
140 COG1692 Calcineurin-like phosp 43.2 34 0.00075 30.0 3.9 32 226-257 212-243 (266)
141 PRK10773 murF UDP-N-acetylmura 40.9 83 0.0018 29.8 6.6 66 54-120 325-392 (453)
142 KOG3770 Acid sphingomyelinase 39.5 69 0.0015 31.6 5.7 61 68-128 196-266 (577)
143 COG4320 Uncharacterized protei 36.5 70 0.0015 29.3 4.8 59 43-109 46-108 (410)
144 COG3855 Fbp Uncharacterized pr 34.5 20 0.00044 34.3 1.2 23 53-75 37-59 (648)
145 cd01533 4RHOD_Repeat_2 Member 32.6 1.8E+02 0.0039 21.2 6.1 56 60-120 45-100 (109)
146 PRK04531 acetylglutamate kinas 30.3 68 0.0015 30.2 4.0 22 97-118 20-41 (398)
147 TIGR01143 murF UDP-N-acetylmur 29.4 2.2E+02 0.0047 26.6 7.3 69 53-122 295-365 (417)
148 PF06180 CbiK: Cobalt chelatas 24.8 87 0.0019 27.7 3.5 66 52-127 140-217 (262)
149 PF07028 DUF1319: Protein of u 24.6 1.1E+02 0.0024 23.9 3.6 36 7-42 87-122 (126)
150 PF08497 Radical_SAM_N: Radica 24.1 1E+02 0.0022 27.8 3.7 35 73-107 9-44 (302)
151 smart00549 TAFH TAF homology. 23.2 1.4E+02 0.003 22.0 3.6 33 7-40 21-53 (92)
152 PF09949 DUF2183: Uncharacteri 22.2 3.1E+02 0.0067 20.3 5.5 37 76-118 59-95 (100)
153 PRK14981 DNA-directed RNA poly 21.8 1.9E+02 0.0042 21.9 4.5 35 6-42 76-110 (112)
154 PF02609 Exonuc_VII_S: Exonucl 21.5 2.4E+02 0.0051 18.1 4.4 35 11-46 5-39 (53)
155 TIGR03729 acc_ester putative p 20.9 1.6E+02 0.0035 25.0 4.4 30 223-252 195-224 (239)
156 COG0770 MurF UDP-N-acetylmuram 20.8 4.3E+02 0.0093 25.3 7.5 94 27-121 300-395 (451)
157 COG3792 Uncharacterized protei 20.7 22 0.00048 27.5 -1.0 32 57-95 24-61 (122)
158 PF13277 YmdB: YmdB-like prote 20.4 65 0.0014 28.3 1.8 36 84-124 31-67 (253)
159 PRK00485 fumC fumarate hydrata 20.2 7.4E+02 0.016 23.7 9.1 88 21-108 59-151 (464)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-71 Score=466.59 Aligned_cols=253 Identities=66% Similarity=1.217 Sum_probs=250.0
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCCCCceEeeccccc
Q 024564 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVD 92 (266)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vd 92 (266)
++++.++++++++.+++.++..||.+++++|.+|+++..++.|+.|+|||||++++|..+|+..|.++.+.|+|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeC
Q 024564 93 RGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHG 172 (266)
Q Consensus 93 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHa 172 (266)
||.+|+|++.+|+.+|.+||+++++||||||.+.+...|||++||+++||+..+|+.+.+.|+.||++|++++++|||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccce
Q 024564 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGF 252 (266)
Q Consensus 173 Gi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~ 252 (266)
|++|++.+++||+.++|.+++|..++++|++||||.+..+|..++||.|+.||.++++.|++.||+.+|+|+||.+.+||
T Consensus 162 GlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGy 241 (303)
T KOG0372|consen 162 GLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGY 241 (303)
T ss_pred CCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCeeeeeec
Q 024564 253 NWAHVIFDFQILT 265 (266)
Q Consensus 253 ~~~~~~~~~~~~t 265 (266)
+++|+.++++|||
T Consensus 242 k~~F~~~v~TVWS 254 (303)
T KOG0372|consen 242 KWHFDEKVVTVWS 254 (303)
T ss_pred HHhcCCceEEEec
Confidence 9999999999997
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-65 Score=423.27 Aligned_cols=254 Identities=61% Similarity=1.133 Sum_probs=249.6
Q ss_pred hcHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccc
Q 024564 12 TDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYV 91 (266)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~v 91 (266)
-+++++|+.++.|+.+++.++..||+-++++|..|+++.+++.|+.|+|||||++.+|..+++..|--|+..|||+||||
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfV 83 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFV 83 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEecccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEe
Q 024564 92 DRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLH 171 (266)
Q Consensus 92 drG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vH 171 (266)
|||..|+|+..+|+.||.+||.++.+||||||.+.+...|||++||..+||+...|+...+.|+.|+++++|+++++|||
T Consensus 84 DRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVH 163 (306)
T KOG0373|consen 84 DRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVH 163 (306)
T ss_pred ccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccc
Q 024564 172 GGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDG 251 (266)
Q Consensus 172 aGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G 251 (266)
||++|++..++|++.+.|-+++|.+++++|++||||++.+.|..++||+|++||++++.+|...|++++|.|+||.+++|
T Consensus 164 GGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG 243 (306)
T KOG0373|consen 164 GGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEG 243 (306)
T ss_pred CCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCe-eeeeec
Q 024564 252 FNWAHVIF-DFQILT 265 (266)
Q Consensus 252 ~~~~~~~~-~~~~~t 265 (266)
|++.|+.+ .+++||
T Consensus 244 ~KymF~eK~lvTVWS 258 (306)
T KOG0373|consen 244 FKYMFDEKGLVTVWS 258 (306)
T ss_pred HHhccCCCCEEEEec
Confidence 99999999 888886
No 3
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.7e-63 Score=446.32 Aligned_cols=257 Identities=32% Similarity=0.592 Sum_probs=235.6
Q ss_pred CCChhcHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCC----CccEeecCCCCHHHHHHHHHhcCCCC-CC
Q 024564 8 TDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKS----PVTICGDIHGQFHDLAELFQIGGKCP-DT 82 (266)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~----~i~viGDiHG~~~~l~~ll~~~~~~~-~~ 82 (266)
|.|..+++++++++.+.+.++++++.+||++|++++++||++++++. |++|||||||++.+|.++|+..++++ .+
T Consensus 1 ~~~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~ 80 (321)
T cd07420 1 PLTKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPEN 80 (321)
T ss_pred CCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccc
Confidence 78999999999999999999999999999999999999999998875 89999999999999999999999875 46
Q ss_pred ceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCC--hhHHHHHHHHHhhcCcE
Q 024564 83 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLT 160 (266)
Q Consensus 83 ~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~lP~~ 160 (266)
++||||||||||++|+||+.+|+++|..+|+++++||||||.+.++..+||.+|+..+|+. ..+|+.+.++|+.||++
T Consensus 81 ~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPla 160 (321)
T cd07420 81 PYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLA 160 (321)
T ss_pred eEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCce
Confidence 7999999999999999999999999999999999999999999999999999999999984 67999999999999999
Q ss_pred EEEcCcEEEEeCCCCCCCCcHHhhhccCCccc-----cCC----------------------CCCccccccCCCCCCCC-
Q 024564 161 ALVESEIFCLHGGLSPSIETLDNIRNFDRVQE-----VPH----------------------EGPMCDLLWSDPDDRCG- 212 (266)
Q Consensus 161 ~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~~-----~~~----------------------~~~~~dllW~dp~~~~~- 212 (266)
++++++++||||||+| ..++++++.++|+.. .|. ...+.|+|||||.+..+
T Consensus 161 aii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~ 239 (321)
T cd07420 161 TIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGC 239 (321)
T ss_pred EEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCC
Confidence 9999999999999987 457888888877421 121 03467999999987544
Q ss_pred CCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceeeecCCeeeeeec
Q 024564 213 WGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 213 ~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~~~~~t 265 (266)
|.+++||.|+.||.+++++||++||+++||||||++++||++.+++++++|||
T Consensus 240 ~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFS 292 (321)
T cd07420 240 KPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFS 292 (321)
T ss_pred CccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEec
Confidence 67778999999999999999999999999999999999999999999999998
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=5.9e-63 Score=438.31 Aligned_cols=252 Identities=73% Similarity=1.276 Sum_probs=244.6
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccC
Q 024564 14 LDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDR 93 (266)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdr 93 (266)
++.+++++.++..++++++.+||++|++++++||++++++.+++||||||||+.+|.++|+..++++.+++|||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred CCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCC
Q 024564 94 GYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGG 173 (266)
Q Consensus 94 G~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaG 173 (266)
|++|+|++.+++.++..+|.++++||||||.+.++..++|..|+..+|+...+|..+.++|++||++++++++++|||||
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred CCCCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCccccee
Q 024564 174 LSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 253 (266)
Q Consensus 174 i~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~ 253 (266)
++|...++++++.++|+.+.|.++.+.|++||||.+..+|.+++||.|+.||.+++++||++||+++||||||++++||+
T Consensus 162 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~ 241 (285)
T cd07415 162 LSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQ 241 (285)
T ss_pred CCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEE
Confidence 99999999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred eecCCeeeeeec
Q 024564 254 WAHVIFDFQILT 265 (266)
Q Consensus 254 ~~~~~~~~~~~t 265 (266)
+.+++++++|||
T Consensus 242 ~~~~~~~~TvfS 253 (285)
T cd07415 242 WMFDDKLVTVWS 253 (285)
T ss_pred EecCCcEEEEec
Confidence 999999999998
No 5
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=4.7e-62 Score=435.03 Aligned_cols=253 Identities=56% Similarity=1.068 Sum_probs=243.1
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCCCCceEeeccccc
Q 024564 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVD 92 (266)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vd 92 (266)
+++.+++++.+...++++++.+||++|++++++||++++++.+++|+||||||+.+|.++++..+..+.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 47889999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeC
Q 024564 93 RGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHG 172 (266)
Q Consensus 93 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHa 172 (266)
||++|+|++.+++++|..+|.++++||||||.+.++..++|..|+..+|+....|+.+.++|++||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778899999999999999999999999999
Q ss_pred CCCCCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccce
Q 024564 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGF 252 (266)
Q Consensus 173 Gi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~ 252 (266)
|++|...++++++.+.|+.+.|.++.+.|++||||.+..+|.+++||.|+.||.+++++||++||+++||||||++++||
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 241 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGY 241 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccce
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999999999
Q ss_pred eeecCCe-eeeeec
Q 024564 253 NWAHVIF-DFQILT 265 (266)
Q Consensus 253 ~~~~~~~-~~~~~t 265 (266)
++.++++ +++|||
T Consensus 242 ~~~~~~~~~iTvfS 255 (303)
T PTZ00239 242 KYWFPDQNLVTVWS 255 (303)
T ss_pred EEEeCCCeEEEEEC
Confidence 9987654 999998
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.8e-61 Score=432.75 Aligned_cols=257 Identities=45% Similarity=0.920 Sum_probs=244.4
Q ss_pred CCChhcHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCC
Q 024564 8 TDTTTDLDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKC 79 (266)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~ 79 (266)
++...+++++++++..+. .++++++.+||++|++++++||++++++.+++|||||||++.+|.++|+..+++
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~ 84 (320)
T PTZ00480 5 KKGEIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYP 84 (320)
T ss_pred cccCcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCC
Confidence 444566899999988654 589999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCc
Q 024564 80 PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPL 159 (266)
Q Consensus 80 ~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~ 159 (266)
+.+++||||||||||++|+|++.+++.+|..+|.++++||||||.+.++..++|..++..+|+ ..+|..+.++|..||+
T Consensus 85 ~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPl 163 (320)
T PTZ00480 85 PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPV 163 (320)
T ss_pred CcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccH
Confidence 999999999999999999999999999999999999999999999999999999999999995 6799999999999999
Q ss_pred EEEEcCcEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCC-CCCCCcCCCCCceeeCHHHHHHHHHHCCC
Q 024564 160 TALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNL 238 (266)
Q Consensus 160 ~~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~-~~~~~~~~rg~~~~fG~~~~~~fl~~~~~ 238 (266)
+|+++++++||||||+|....+++++.+.|+.+.|.++.+.|++||||.+ ..+|.+++||.|++||.+++++||++||+
T Consensus 164 aAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l 243 (320)
T PTZ00480 164 AALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHEL 243 (320)
T ss_pred hheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999889999999999986 57899999999999999999999999999
Q ss_pred ceEEEcccCcccceeeecCCeeeeeec
Q 024564 239 KLIARAHQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 239 ~~iirgH~~~~~G~~~~~~~~~~~~~t 265 (266)
++||||||++++||++.+++++++|||
T Consensus 244 ~~IiR~Hq~v~~G~~~~~~~~~iTvFS 270 (320)
T PTZ00480 244 DLICRAHQVVEDGYEFFSKRQLVTLFS 270 (320)
T ss_pred cEEEEcCccccCceEEeCCCcEEEEeC
Confidence 999999999999999999999999998
No 7
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.3e-60 Score=428.42 Aligned_cols=263 Identities=36% Similarity=0.683 Sum_probs=246.1
Q ss_pred CCCCCCC-CChhcHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCC----ccEeecCCCCHHHHHHHHHhc
Q 024564 2 GANSLST-DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSP----VTICGDIHGQFHDLAELFQIG 76 (266)
Q Consensus 2 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~----i~viGDiHG~~~~l~~ll~~~ 76 (266)
|.|.--| .|.+.+++++++++++..++++++.+||++|+++++++|++++++.+ ++||||||||+.+|.++|+..
T Consensus 3 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~ 82 (316)
T cd07417 3 GPRLEDEKVTLEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELN 82 (316)
T ss_pred CcccCCCCCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhc
Confidence 5566667 78889999999999999999999999999999999999999988755 999999999999999999999
Q ss_pred CCCCC-CceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHh
Q 024564 77 GKCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFD 155 (266)
Q Consensus 77 ~~~~~-~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 155 (266)
++++. +++||||||||||++|+||+.+++++|..+|+++++||||||.+.++..++|..++..+|+ ..+|+.+.++|+
T Consensus 83 g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~ 161 (316)
T cd07417 83 GLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFN 161 (316)
T ss_pred CCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHH
Confidence 98754 5699999999999999999999999999999999999999999999999999999999995 578999999999
Q ss_pred hcCcEEEEcCcEEEEeCCC-CCCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHH
Q 024564 156 YFPLTALVESEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNH 234 (266)
Q Consensus 156 ~lP~~~~i~~~~l~vHaGi-~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~ 234 (266)
+||++++++++++|||||+ +|...+++++..++|+.+.|.++.+.|++||||.+..+|.+++||.|+.||.+++++||+
T Consensus 162 ~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~ 241 (316)
T cd07417 162 WLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLE 241 (316)
T ss_pred hchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHH
Confidence 9999999999999999999 556788999999999988888889999999999987889999999999999999999999
Q ss_pred HCCCceEEEcccCcccceeeecCCeeeeeec
Q 024564 235 TNNLKLIARAHQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 235 ~~~~~~iirgH~~~~~G~~~~~~~~~~~~~t 265 (266)
+||+++||||||++++||++.+++++++|||
T Consensus 242 ~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 272 (316)
T cd07417 242 ENNLEYIIRSHEVKDEGYEVEHDGKCITVFS 272 (316)
T ss_pred HcCCcEEEECCcccceeEEEecCCeEEEEeC
Confidence 9999999999999999999999999999998
No 8
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=2.3e-60 Score=425.79 Aligned_cols=252 Identities=42% Similarity=0.775 Sum_probs=238.5
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCCCCceEeeccccc
Q 024564 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVD 92 (266)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vd 92 (266)
.++.+++++++++.++++++.+||++|++++++||++++++.|++||||||||+.+|.++|+..+.++.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 57889999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred CCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeC
Q 024564 93 RGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHG 172 (266)
Q Consensus 93 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHa 172 (266)
||++|+|++.+++++|..+|.++++||||||.+.++..++|..++..+|+ ..+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~-~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc-HHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 99999999999999999999999999999999999999999999999994 67899999999999999999999999999
Q ss_pred CCCCCCCcHHhhhccCCccccCCCCCccccccCCCCCCC-------CCCc-CCCCCceeeCHHHHHHHHHHCCCceEEEc
Q 024564 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRC-------GWGI-SPRGAGYTFGQDISEQFNHTNNLKLIARA 244 (266)
Q Consensus 173 Gi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~-------~~~~-~~rg~~~~fG~~~~~~fl~~~~~~~iirg 244 (266)
|++|.+.++++++.++|+.+.|..+.+.|++||||.+.. .|.+ ++||.++.||.+++++||++||+++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 999999999999999999988888999999999997522 3655 48999999999999999999999999999
Q ss_pred ccCcccceeeecCC------eeeeeec
Q 024564 245 HQLVMDGFNWAHVI------FDFQILT 265 (266)
Q Consensus 245 H~~~~~G~~~~~~~------~~~~~~t 265 (266)
||++++||++.+++ ++++|||
T Consensus 241 He~~~~G~~~~~~~~~~~~~~~iTvFS 267 (305)
T cd07416 241 HEAQDAGYRMYRKSQTTGFPSLITIFS 267 (305)
T ss_pred ccccccceEEecCCCcCCCCcEEEEeC
Confidence 99999999999987 8999998
No 9
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.9e-60 Score=423.31 Aligned_cols=251 Identities=39% Similarity=0.796 Sum_probs=236.5
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCCCCceE
Q 024564 14 LDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYL 85 (266)
Q Consensus 14 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~v 85 (266)
++.+++++.+.. .++++++.+||+++++++++||++++++.|++||||||||+.+|.++|+..++++.++++
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 455555555433 578999999999999999999999999999999999999999999999999999888999
Q ss_pred eecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcC
Q 024564 86 FMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVES 165 (266)
Q Consensus 86 fLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~ 165 (266)
|||||||||++|.|++.+++.+|..+|.+++++|||||.+.++..++|..++..+|+ ..+|+.+.++|+.||+++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEecC
Confidence 999999999999999999999999999999999999999999999999999999995 6789999999999999999999
Q ss_pred cEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCC-CCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEc
Q 024564 166 EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARA 244 (266)
Q Consensus 166 ~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~-~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirg 244 (266)
+++|||||++|.+.++++++.++|+.+.|.++.+.|++||||.. ..+|.+++||.|++||.+++++||++||+++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999999888888899999999986 57899999999999999999999999999999999
Q ss_pred ccCcccceeeecCCeeeeeec
Q 024564 245 HQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 245 H~~~~~G~~~~~~~~~~~~~t 265 (266)
||++++||++.+++++++|||
T Consensus 243 Hq~~~~G~~~~~~~~~iTvfS 263 (294)
T PTZ00244 243 HQVMERGYGFFASRQLVTVFS 263 (294)
T ss_pred CccccCceEEcCCCeEEEEeC
Confidence 999999999999999999998
No 10
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=2.1e-60 Score=423.56 Aligned_cols=251 Identities=45% Similarity=0.969 Sum_probs=238.1
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCCCCceE
Q 024564 14 LDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYL 85 (266)
Q Consensus 14 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~v 85 (266)
++++++++.... .++++++.+||+++++++++||++++++.+++||||||||+.+|.++|+..++++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 566777776544 689999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcC
Q 024564 86 FMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVES 165 (266)
Q Consensus 86 fLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~ 165 (266)
|||||||||++|+|++.+++++|..+|.++++||||||.+.++..++|..++..+|+ ..+|..+.++|++||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999995 6789999999999999999999
Q ss_pred cEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCC-CCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEc
Q 024564 166 EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARA 244 (266)
Q Consensus 166 ~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~-~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirg 244 (266)
+++|||||++|...++++++.++|+.+.|..+.+.|++||||.. ..+|.+++||.++.||.+++++||++||+++||||
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 240 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRA 240 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999999888888999999999986 57899999999999999999999999999999999
Q ss_pred ccCcccceeeecCCeeeeeec
Q 024564 245 HQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 245 H~~~~~G~~~~~~~~~~~~~t 265 (266)
||++++||++.+++++++|||
T Consensus 241 He~~~~G~~~~~~~~~iTvfS 261 (293)
T cd07414 241 HQVVEDGYEFFAKRQLVTLFS 261 (293)
T ss_pred CccccCeEEEeCCCcEEEEec
Confidence 999999999999999999998
No 11
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=4.6e-59 Score=411.66 Aligned_cols=238 Identities=53% Similarity=0.965 Sum_probs=228.6
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHH
Q 024564 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVA 106 (266)
Q Consensus 27 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~ 106 (266)
++++++.+||++|++++++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred HHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCCCCCCcHHhhhc
Q 024564 107 LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRN 186 (266)
Q Consensus 107 l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~~~~~~~~~ 186 (266)
++..+|.++++||||||.+.++..++|..++..+|+ ..+|+.+.++|++||++++++++++|||||++|...++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999996 6899999999999999999999999999999999999999999
Q ss_pred cCCccccCCCCCccccccCCCCC-CCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceeeecCCeeeeeec
Q 024564 187 FDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 187 ~~r~~~~~~~~~~~dllW~dp~~-~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~~~~~t 265 (266)
++|+.+.+.++.+.|++||||.. ..+|.+++||.++.||.+++++||++||+++||||||++++||++.+++++++|||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 239 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFS 239 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEEC
Confidence 99998888888999999999964 67899999999999999999999999999999999999999999999999999998
No 12
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-60 Score=397.94 Aligned_cols=266 Identities=77% Similarity=1.313 Sum_probs=261.5
Q ss_pred CCCCCCCCCChhcHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCC
Q 024564 1 MGANSLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCP 80 (266)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~ 80 (266)
|.+++.++..+.+++..++.+..|+++++.++..+|+.|+++|+++.++.+++.+++|+||+||+|++|+.+++..|..+
T Consensus 7 ~ra~~~~~~~i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~p 86 (319)
T KOG0371|consen 7 MRARILATALILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAP 86 (319)
T ss_pred ccccccccccccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcE
Q 024564 81 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLT 160 (266)
Q Consensus 81 ~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~ 160 (266)
+..++|+|||||||++|.|++.+|.++|.+||++|.+||||||.+.+...|+|++||+++||+..+|..+.+.|+.+|+.
T Consensus 87 dtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~t 166 (319)
T KOG0371|consen 87 DTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLT 166 (319)
T ss_pred CcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHCCCce
Q 024564 161 ALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKL 240 (266)
Q Consensus 161 ~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~ 240 (266)
+.++++++|.|||++|++..+++++.++|.+++|.+++++|+||+||+++.+|..++||.++-||.+..+.|-.+||+++
T Consensus 167 ali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lsl 246 (319)
T KOG0371|consen 167 ALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSL 246 (319)
T ss_pred hhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccCcccceeeecCCeeeeeecC
Q 024564 241 IARAHQLVMDGFNWAHVIFDFQILTR 266 (266)
Q Consensus 241 iirgH~~~~~G~~~~~~~~~~~~~t~ 266 (266)
|-|.||.+.+||.+.+...++++||.
T Consensus 247 isRahqlvm~g~nW~~~~~~vtiFSa 272 (319)
T KOG0371|consen 247 ISRAHQLVMEGYNWYHLWNVVTIFSA 272 (319)
T ss_pred hHHHHHHHhcccceeeecceeEEccC
Confidence 99999999999999999999999984
No 13
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.3e-57 Score=414.09 Aligned_cols=259 Identities=35% Similarity=0.572 Sum_probs=233.6
Q ss_pred CCCChhcHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCccccC----CCccEeecCCCCHHHHHHH
Q 024564 7 STDTTTDLDEQISQLMQC----------KPLSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAEL 72 (266)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~l~~~~~~~~~~----~~i~viGDiHG~~~~l~~l 72 (266)
.+.|.+.++.|++.++.. ..++.+++.+||++|++++++||++++++ .+++|||||||++.+|.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~l 84 (377)
T cd07418 5 GALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFL 84 (377)
T ss_pred CccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHH
Confidence 347889999999999765 34789999999999999999999999987 7999999999999999999
Q ss_pred HHhcCCCCC-CceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCC--hhHHHH
Q 024564 73 FQIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKI 149 (266)
Q Consensus 73 l~~~~~~~~-~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~ 149 (266)
|+..++++. ..+||||||||||++|+||+.+++.++..+|+++++||||||.+.++..++|..++..+|+. ..+|+.
T Consensus 85 l~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~ 164 (377)
T cd07418 85 LEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRK 164 (377)
T ss_pred HHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHH
Confidence 999998765 45999999999999999999999999999999999999999999999999999999999985 378999
Q ss_pred HHHHHhhcCcEEEEcCcEEEEeCCCC---------------------------CCCCcHHhhhccCCc-cccCCCC---C
Q 024564 150 FTDLFDYFPLTALVESEIFCLHGGLS---------------------------PSIETLDNIRNFDRV-QEVPHEG---P 198 (266)
Q Consensus 150 ~~~~~~~lP~~~~i~~~~l~vHaGi~---------------------------p~~~~~~~~~~~~r~-~~~~~~~---~ 198 (266)
+.+||++||++++++++++||||||+ |.+.++++++.++|+ .+.|..+ .
T Consensus 165 ~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i 244 (377)
T cd07418 165 CLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLI 244 (377)
T ss_pred HHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccc
Confidence 99999999999999999999999994 345678888888886 4555554 3
Q ss_pred ccccccCCCCCCCCCCcC-CCCCceeeCHHHHHHHHHHCCCceEEEcccC------------cccceeeecC---Ceeee
Q 024564 199 MCDLLWSDPDDRCGWGIS-PRGAGYTFGQDISEQFNHTNNLKLIARAHQL------------VMDGFNWAHV---IFDFQ 262 (266)
Q Consensus 199 ~~dllW~dp~~~~~~~~~-~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~------------~~~G~~~~~~---~~~~~ 262 (266)
+.|+|||||....+|.++ .||.|+.||.+++++||++|++++||||||+ +++||++.|+ +++++
T Consensus 245 ~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liT 324 (377)
T cd07418 245 PGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLIT 324 (377)
T ss_pred ceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEE
Confidence 689999999987777665 7999999999999999999999999999996 6799999998 99999
Q ss_pred eec
Q 024564 263 ILT 265 (266)
Q Consensus 263 ~~t 265 (266)
|||
T Consensus 325 vFS 327 (377)
T cd07418 325 LFS 327 (377)
T ss_pred Eec
Confidence 998
No 14
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=5.8e-58 Score=411.41 Aligned_cols=240 Identities=49% Similarity=0.963 Sum_probs=233.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcC-CCCCCceEeecccccCCCCcHHHHHHH
Q 024564 26 PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSVETVTLL 104 (266)
Q Consensus 26 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~-~~~~~~~vfLGD~vdrG~~s~evl~~l 104 (266)
.++++++.++|..+.+++.++|++++++.||.|+|||||+|.+|.+++...+ ++++.++||||||||||++|+|++.+|
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 3889999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCCCCCCcHHhh
Q 024564 105 VALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184 (266)
Q Consensus 105 ~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~~~~~~~ 184 (266)
+++|++||++++++|||||.+.++..|||++|+..+|+...+|..+.+.|..||+++.++++++|+|||++|.+.+++++
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 99999999999999999999999999999999999997678999999999999999999999999999999999999999
Q ss_pred hccCCccccCCCCCccccccCCCCC-CCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceeeecCCeeeee
Q 024564 185 RNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHVIFDFQI 263 (266)
Q Consensus 185 ~~~~r~~~~~~~~~~~dllW~dp~~-~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~~~~ 263 (266)
+.+.|+.+.|..+..+|++|+||.. ..+|..+.||.++.||++++++||+++++++||||||++++||++..+.+.++|
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTI 270 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTI 270 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEE
Confidence 9999999999999999999999987 589999999999999999999999999999999999999999999999999999
Q ss_pred ec
Q 024564 264 LT 265 (266)
Q Consensus 264 ~t 265 (266)
|+
T Consensus 271 FS 272 (331)
T KOG0374|consen 271 FS 272 (331)
T ss_pred ec
Confidence 97
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=2.6e-56 Score=401.07 Aligned_cols=241 Identities=40% Similarity=0.764 Sum_probs=221.8
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCCC--------CceEeecccccCCCC
Q 024564 25 KPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPD--------TNYLFMGDYVDRGYY 96 (266)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~--------~~~vfLGD~vdrG~~ 96 (266)
..++++++.+||++|++++++||++++++.+++||||||||+++|.++|+..++++. .++|||||||||||+
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 357899999999999999999999999999999999999999999999999887643 579999999999999
Q ss_pred cHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCC-----hhHHHHHHHHHhhcCcEEEEcCcEEEEe
Q 024564 97 SVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN-----ANIWKIFTDLFDYFPLTALVESEIFCLH 171 (266)
Q Consensus 97 s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~-----~~~~~~~~~~~~~lP~~~~i~~~~l~vH 171 (266)
|+||+.++++++..+|.++++||||||.+.++..++|..++..+|+. ...|..+.++|+.||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999998875 3588999999999999999999999999
Q ss_pred CCCCCCCCcHHhhhccCCcc-ccCCCCCccccccCCCCCC---CCCCcCC---CCCc--eeeCHHHHHHHHHHCCCceEE
Q 024564 172 GGLSPSIETLDNIRNFDRVQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQDISEQFNHTNNLKLIA 242 (266)
Q Consensus 172 aGi~p~~~~~~~~~~~~r~~-~~~~~~~~~dllW~dp~~~---~~~~~~~---rg~~--~~fG~~~~~~fl~~~~~~~ii 242 (266)
||++|...++++++.+.|+. ..+.++.+.|++||||... .+|.+++ ||.| +.||.+++++||++||+++||
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~ii 258 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMII 258 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEE
Confidence 99999999999999999886 4455677899999999863 4566655 8888 699999999999999999999
Q ss_pred EcccCcccceeeecCCeeeeeec
Q 024564 243 RAHQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 243 rgH~~~~~G~~~~~~~~~~~~~t 265 (266)
||||++++||++.+++++++|||
T Consensus 259 RgHe~~~~G~~~~~~~~~iTvfS 281 (311)
T cd07419 259 RAHECVMDGFERFAQGKLITLFS 281 (311)
T ss_pred EechhhhCCeEEeCCCeEEEEec
Confidence 99999999999999999999998
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=7.2e-54 Score=376.25 Aligned_cols=248 Identities=42% Similarity=0.776 Sum_probs=234.8
Q ss_pred CChhcHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCCCCCceEeec
Q 024564 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMG 88 (266)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLG 88 (266)
.++++.+-+-+++...+.++++..+.|+.++..+|++|++++++.+||.|+|||||+|.+|+++++..|.+.+++|+|||
T Consensus 43 ~gkP~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLG 122 (517)
T KOG0375|consen 43 TGKPRHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLG 122 (517)
T ss_pred CCCcchHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeec
Confidence 56778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEE
Q 024564 89 DYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIF 168 (266)
Q Consensus 89 D~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l 168 (266)
||||||..|+||+.+|.+||+.||+.+++||||||.+.+...+.|..||.-+| +.+++++..+.|+.||+++..+++++
T Consensus 123 DYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQfl 201 (517)
T KOG0375|consen 123 DYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFL 201 (517)
T ss_pred cccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceE
Confidence 99999999999999999999999999999999999999999999999999999 67999999999999999999999999
Q ss_pred EEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCCC-------CCC-CcCCCCCceeeCHHHHHHHHHHCCCce
Q 024564 169 CLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR-------CGW-GISPRGAGYTFGQDISEQFNHTNNLKL 240 (266)
Q Consensus 169 ~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~-------~~~-~~~~rg~~~~fG~~~~~~fl~~~~~~~ 240 (266)
|||||++|.+.++++|+.++|+.++|..++++|+||+||.+. +.| ..+.||.+|.|...++.+||+.||+--
T Consensus 202 CVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLS 281 (517)
T KOG0375|consen 202 CVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLS 281 (517)
T ss_pred EecCCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchh
Confidence 999999999999999999999999999999999999999741 123 245689999999999999999999999
Q ss_pred EEEcccCcccceeeecC
Q 024564 241 IARAHQLVMDGFNWAHV 257 (266)
Q Consensus 241 iirgH~~~~~G~~~~~~ 257 (266)
|||+||.++.||.+.-.
T Consensus 282 IiRAHEAQDaGYRMYrk 298 (517)
T KOG0375|consen 282 IIRAHEAQDAGYRMYRK 298 (517)
T ss_pred hhhhhhhhhhhhhhhhc
Confidence 99999999999988543
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-49 Score=353.26 Aligned_cols=263 Identities=30% Similarity=0.571 Sum_probs=232.2
Q ss_pred CCCCCCCCChhcHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc----CCCccEeecCCCCHHHHHHHHHhcC
Q 024564 2 GANSLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV----KSPVTICGDIHGQFHDLAELFQIGG 77 (266)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~----~~~i~viGDiHG~~~~l~~ll~~~~ 77 (266)
|.+.--|++.+++..++|+|+..+.+.+.++..++.+++++|+..|++-++ +..+.|+||+||.+++|.-+|.+.|
T Consensus 109 Gp~ls~Pl~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNG 188 (631)
T KOG0377|consen 109 GPKLSLPLRKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNG 188 (631)
T ss_pred CcccccCcCchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCC
Confidence 556667999999999999999999999999999999999999999999775 4579999999999999999999999
Q ss_pred CCCC-CceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCC--hhHHHHHHHHH
Q 024564 78 KCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLF 154 (266)
Q Consensus 78 ~~~~-~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~ 154 (266)
+|.. ..|||.||+||||.+|+|||..|+++...||..+++-|||||..++|..|||.+|...+|.. .++.+.+.+++
T Consensus 189 lPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy 268 (631)
T KOG0377|consen 189 LPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVY 268 (631)
T ss_pred CCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHH
Confidence 8764 66999999999999999999999999999999999999999999999999999999999963 46788889999
Q ss_pred hhcCcEEEEcCcEEEEeCCCCCCCCcHHhhhccCCcc-----ccCC-----------------CCCccccccCCCCCCCC
Q 024564 155 DYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQ-----EVPH-----------------EGPMCDLLWSDPDDRCG 212 (266)
Q Consensus 155 ~~lP~~~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~-----~~~~-----------------~~~~~dllW~dp~~~~~ 212 (266)
+.||++.+++.++++||||++..- .++-+..++|-. .+|. +.++.|++||||....+
T Consensus 269 ~WLPi~tiid~~ilvvHGGiSd~T-dl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~G 347 (631)
T KOG0377|consen 269 RWLPIGTIIDSRILVVHGGISDST-DLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMG 347 (631)
T ss_pred HhcchhhhcccceEEEecCcccch-hHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccC
Confidence 999999999999999999998653 444444444321 1121 12467899999987666
Q ss_pred C-CcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceeeecCCeeeeeec
Q 024564 213 W-GISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 213 ~-~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~~~~~t 265 (266)
+ ...-||.|++||++.+.+||++++++++||||||.++|||++|++++++|||
T Consensus 348 C~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFS 401 (631)
T KOG0377|consen 348 CVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFS 401 (631)
T ss_pred CCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEe
Confidence 4 4556999999999999999999999999999999999999999999999997
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=8.9e-40 Score=298.73 Aligned_cols=256 Identities=36% Similarity=0.690 Sum_probs=236.5
Q ss_pred CChhcHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccC----CCccEeecCCCCHHHHHHHHHhcCCCC-CCc
Q 024564 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAELFQIGGKCP-DTN 83 (266)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~----~~i~viGDiHG~~~~l~~ll~~~~~~~-~~~ 83 (266)
.|.+++..+++.+.+...++...+-.|+..++.++.+.+++++++ .++.++||.||++.++.+++...|.++ ...
T Consensus 165 vt~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ 244 (476)
T KOG0376|consen 165 VTLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNP 244 (476)
T ss_pred hhHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCccc
Confidence 466788888888899999999999999999999999999998764 468999999999999999999988765 578
Q ss_pred eEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEE
Q 024564 84 YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALV 163 (266)
Q Consensus 84 ~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i 163 (266)
++|.||++|||..|.|++..++..+..+|++++++|||||...++..|+|..++..+|. .+.+..+.+.|..||++..+
T Consensus 245 ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i 323 (476)
T KOG0376|consen 245 YLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLI 323 (476)
T ss_pred ccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999995 44455556999999999999
Q ss_pred cCcEEEEeCCCC-CCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHCCCceEE
Q 024564 164 ESEIFCLHGGLS-PSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIA 242 (266)
Q Consensus 164 ~~~~l~vHaGi~-p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~ii 242 (266)
+++++.+|||+. |.-..+++++++.|+...|.++.+++++|+||....+..++.||.|..||.+++.+||+.++++.||
T Consensus 324 ~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~ 403 (476)
T KOG0376|consen 324 NNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKII 403 (476)
T ss_pred cCceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHh
Confidence 999999999974 4445799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccCcccceeeecCCeeeeeec
Q 024564 243 RAHQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 243 rgH~~~~~G~~~~~~~~~~~~~t 265 (266)
|||++.+.||++.|+|++++||+
T Consensus 404 rshe~~d~gy~~eh~g~l~tvfs 426 (476)
T KOG0376|consen 404 RSHEVKDEGYEVEHSGKLITVFS 426 (476)
T ss_pred hccccCCCceeeecCCcEEEEec
Confidence 99999999999999999999997
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=8.9e-35 Score=250.00 Aligned_cols=198 Identities=44% Similarity=0.739 Sum_probs=162.4
Q ss_pred cEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHH
Q 024564 57 TICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 136 (266)
Q Consensus 57 ~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e 136 (266)
+|||||||++++|.++++.++..+.+.+||+||++|||+.+.+++.+++.++.. |.++++|+||||.+.+....++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888899999999999999999999999998776 7889999999999988766554432
Q ss_pred H--------HHHhCChhHHHHHHHHHhhcCcEEEEcC-cEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCC
Q 024564 137 C--------LRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 207 (266)
Q Consensus 137 ~--------~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp 207 (266)
. ...+.....+..+.+|+..||+++.++. +++|||||++|......+.. ..+.+....+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 1 2233345677888999999999998886 99999999999886555443 2334445688999999
Q ss_pred CCCCCCC-cCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceeeecCCeeeeeec
Q 024564 208 DDRCGWG-ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 208 ~~~~~~~-~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~~~~~t 265 (266)
.....+. .+.++. |++..+.|+..++.++|||||+++..|+.....++++.|||
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDt 208 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDS 208 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEec
Confidence 7533322 222222 99999999999999999999999999988778889999998
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=7.4e-29 Score=216.62 Aligned_cols=123 Identities=23% Similarity=0.386 Sum_probs=100.1
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCC---------CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchh
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKC---------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 124 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~---------~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (266)
++++||||||||++.|.++|+++++. +.+++|||||||||||+|.+||++++++. .++++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 47899999999999999999998874 45789999999999999999999999885 34579999999999
Q ss_pred hhhhhhhC-------CHHHHHHHhCC------hhHHHHHHHHHhhcCcEEEEc-CcEEEEeCCCCCCC
Q 024564 125 RQITQVYG-------FYDECLRKYGN------ANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSI 178 (266)
Q Consensus 125 ~~~~~~~~-------~~~e~~~~~~~------~~~~~~~~~~~~~lP~~~~i~-~~~l~vHaGi~p~~ 178 (266)
++++...+ ...+++.+|.. ..+.+.+.+|++++|++..++ ++++|||||++|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 98875432 12345555532 235577889999999988764 67999999998764
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.96 E-value=1.9e-28 Score=209.02 Aligned_cols=175 Identities=20% Similarity=0.286 Sum_probs=129.5
Q ss_pred cEeecCCCCHHHHHHHHHhcCC--------CCCCceEeecccccCCCCcHHHHHHHHHHHhh---CCCeEEEEccCchhh
Q 024564 57 TICGDIHGQFHDLAELFQIGGK--------CPDTNYLFMGDYVDRGYYSVETVTLLVALKVR---YPQRITILRGNHESR 125 (266)
Q Consensus 57 ~viGDiHG~~~~l~~ll~~~~~--------~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~---~p~~v~~lrGNHE~~ 125 (266)
+||||||||+++|.++|+.+++ .+.+.+|++||+|||||++.+|++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 6899999999999999998875 34678999999999999999999999999754 456799999999999
Q ss_pred hhhhhhCCHH-HHHHHhCC-----hhH---HHHHHHHHhhcCcEEEEcCcEEEEeCCCCCCCCcHHhhhccCCccccCCC
Q 024564 126 QITQVYGFYD-ECLRKYGN-----ANI---WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHE 196 (266)
Q Consensus 126 ~~~~~~~~~~-e~~~~~~~-----~~~---~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~ 196 (266)
.++..+.+.. ........ ... ...+.+|++++|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 8865433221 11111100 111 235689999999998866 79999999833
Q ss_pred CCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceeeecCCeeeeeec
Q 024564 197 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHVIFDFQILT 265 (266)
Q Consensus 197 ~~~~dllW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~~~~~t 265 (266)
+|++.-..... .. .-|...+.++++.++.++||+|||+++.|....++|+++.|+|
T Consensus 140 ------~w~r~y~~~~~--~~-----~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~ 195 (208)
T cd07425 140 ------LWYRGYSKETS--DK-----ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDV 195 (208)
T ss_pred ------HHhhHhhhhhh--hc-----cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeC
Confidence 33311000000 00 0112467789999999999999999998887789999999998
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.95 E-value=1.9e-27 Score=204.87 Aligned_cols=116 Identities=23% Similarity=0.345 Sum_probs=93.6
Q ss_pred cEeecCCCCHHHHHHHHHhcCCC--------CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhh
Q 024564 57 TICGDIHGQFHDLAELFQIGGKC--------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 128 (266)
Q Consensus 57 ~viGDiHG~~~~l~~ll~~~~~~--------~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~ 128 (266)
+||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++++... .++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 69999999999999999998765 4678999999999999999999999998643 4799999999999876
Q ss_pred hhhCC------H-----------HHHHHHhC-ChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCC
Q 024564 129 QVYGF------Y-----------DECLRKYG-NANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 175 (266)
Q Consensus 129 ~~~~~------~-----------~e~~~~~~-~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~ 175 (266)
...+. . .++.++++ ..+..+...+||++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 43221 0 13344443 234567889999999999875 58999999985
No 23
>PHA02239 putative protein phosphatase
Probab=99.95 E-value=3.5e-27 Score=204.43 Aligned_cols=138 Identities=23% Similarity=0.378 Sum_probs=105.9
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCC--CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhh
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~--~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 131 (266)
+++++|||||||++.|.++++.+... +.+.+||+|||||||++|.++++.++.+.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 47899999999999999999988543 467899999999999999999999998753 345799999999999775431
Q ss_pred C----------C----HHHHHHHhCCh------------------------------hHHHHHHHHHhhcCcEEEEcCcE
Q 024564 132 G----------F----YDECLRKYGNA------------------------------NIWKIFTDLFDYFPLTALVESEI 167 (266)
Q Consensus 132 ~----------~----~~e~~~~~~~~------------------------------~~~~~~~~~~~~lP~~~~i~~~~ 167 (266)
+ | ..+++.+||.. .....+..|+++||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 1 1 13566777521 0224556799999999885 589
Q ss_pred EEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCC
Q 024564 168 FCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 207 (266)
Q Consensus 168 l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp 207 (266)
+|||||+.|..+..+|. ..+++|.+.
T Consensus 159 ifVHAGi~p~~~~~~q~--------------~~~llWiR~ 184 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQT--------------IDQLIWSRD 184 (235)
T ss_pred EEEeCCCCCCCChhhCC--------------HhHeEEecc
Confidence 99999999887643332 268899954
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.95 E-value=2.2e-27 Score=209.84 Aligned_cols=125 Identities=22% Similarity=0.315 Sum_probs=101.4
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCC-CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhC
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (266)
++++||||||||++.|.++++++++. ..+.++|+||+|||||+|.+|++++.++. .++++|+||||.+++...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 46899999999999999999999875 45789999999999999999999998873 46999999999998876555
Q ss_pred CH----HHHHHHhCChhHHHHHHHHHhhcCcEEEE-cCcEEEEeCCCCCCCCcHH
Q 024564 133 FY----DECLRKYGNANIWKIFTDLFDYFPLTALV-ESEIFCLHGGLSPSIETLD 182 (266)
Q Consensus 133 ~~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~l~vHaGi~p~~~~~~ 182 (266)
.. .....++......+.+.+|++++|+...+ ++++++||||++|.+...+
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~ 131 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLAT 131 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHH
Confidence 32 22333443334456788999999998876 5689999999999885444
No 25
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.95 E-value=9.9e-27 Score=204.64 Aligned_cols=148 Identities=21% Similarity=0.343 Sum_probs=113.1
Q ss_pred CccEeecCCCCHHHHHHHHHhcCCC------CCCceEeecccccCCCCcHHHHHHHHHHHhhCCC-eEEEEccCchhhhh
Q 024564 55 PVTICGDIHGQFHDLAELFQIGGKC------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ-RITILRGNHESRQI 127 (266)
Q Consensus 55 ~i~viGDiHG~~~~l~~ll~~~~~~------~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~-~v~~lrGNHE~~~~ 127 (266)
++++||||||+++.|.++|+.+... ..+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6899999999999999999876422 2456999999999999999999999999888875 68999999998876
Q ss_pred hhhhC-----------------------------------------C----------------------HHHHHHHhCCh
Q 024564 128 TQVYG-----------------------------------------F----------------------YDECLRKYGNA 144 (266)
Q Consensus 128 ~~~~~-----------------------------------------~----------------------~~e~~~~~~~~ 144 (266)
..... | ..+++.+||-.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 43221 1 13566777742
Q ss_pred --------hHHHHHHHHHhhcCcEEEEcCcE-------------EEEeCCCCCCCCcHHhhhccC-CccccCCCCCcccc
Q 024564 145 --------NIWKIFTDLFDYFPLTALVESEI-------------FCLHGGLSPSIETLDNIRNFD-RVQEVPHEGPMCDL 202 (266)
Q Consensus 145 --------~~~~~~~~~~~~lP~~~~i~~~~-------------l~vHaGi~p~~~~~~~~~~~~-r~~~~~~~~~~~dl 202 (266)
.+.+...+|++.||.....+ ++ +|||||+.|+.+..+|.+.+. +-...| -.++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----cccc
Confidence 23456789999999998744 55 999999999999888876542 222222 2478
Q ss_pred ccCCC
Q 024564 203 LWSDP 207 (266)
Q Consensus 203 lW~dp 207 (266)
+|.+.
T Consensus 238 l~~R~ 242 (304)
T cd07421 238 LSGRK 242 (304)
T ss_pred cccch
Confidence 88855
No 26
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.95 E-value=3.4e-27 Score=204.80 Aligned_cols=123 Identities=23% Similarity=0.464 Sum_probs=98.7
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCCC----------CCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCch
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKCP----------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~----------~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 123 (266)
+|+.||||||||+++|+++|+++++.+ .+++|||||||||||+|.+|+++|++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 489999999999999999999997753 468999999999999999999999998643 46999999999
Q ss_pred hhhhhhhhCC-------HHHHHHHhC--ChhHHHHHHHHHhhcCcEEEEc-CcEEEEeCCCCCCC
Q 024564 124 SRQITQVYGF-------YDECLRKYG--NANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSI 178 (266)
Q Consensus 124 ~~~~~~~~~~-------~~e~~~~~~--~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHaGi~p~~ 178 (266)
.++++...+. ..++..++. .....+.+.+||++||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 9988754321 123344443 2345678899999999988765 47999999987654
No 27
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.94 E-value=5e-27 Score=206.16 Aligned_cols=128 Identities=20% Similarity=0.297 Sum_probs=103.8
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCC-CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhC
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (266)
++++||||||||+++|+++|+++++. ..++++|+||+|||||+|.+|+.++.++. +++++|+||||.++++...+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 36899999999999999999999976 46789999999999999999999998875 35789999999999887666
Q ss_pred CH----HHHHHHhCChhHHHHHHHHHhhcCcEEEEc-CcEEEEeCCCCCCCCcHHhhh
Q 024564 133 FY----DECLRKYGNANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIR 185 (266)
Q Consensus 133 ~~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHaGi~p~~~~~~~~~ 185 (266)
+. .+....+-.....+++.+|++++|+....+ .++++||||++|.++..+...
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~ 134 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKE 134 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHH
Confidence 42 223333333455678899999999987654 369999999999996544443
No 28
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.94 E-value=8.2e-27 Score=204.20 Aligned_cols=123 Identities=24% Similarity=0.327 Sum_probs=101.4
Q ss_pred ccEeecCCCCHHHHHHHHHhcCCC-CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCH
Q 024564 56 VTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 134 (266)
Q Consensus 56 i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (266)
++||||||||+++|+++|+++++. +.+.++|+||+|||||+|.||++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999876 46889999999999999999999999886 4699999999999887655432
Q ss_pred ----HHHHHHhCChhHHHHHHHHHhhcCcEEEEcC-cEEEEeCCCCCCCCcHH
Q 024564 135 ----DECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLD 182 (266)
Q Consensus 135 ----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHaGi~p~~~~~~ 182 (266)
.+...++......+++.+|++++|+...+++ ++++||||++|.++..+
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~ 129 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQ 129 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHH
Confidence 2233333333445678999999999998764 89999999999986444
No 29
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.94 E-value=2.1e-26 Score=197.87 Aligned_cols=117 Identities=21% Similarity=0.245 Sum_probs=90.4
Q ss_pred CCCccEeecCCCCHHHHHHHHHhcCCC-CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhh
Q 024564 53 KSPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 131 (266)
.+|++||||||||+++|+++|+.+++. ..++++||||+|||||+|.+||+++.+. ++++|+||||.++++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHH
Confidence 459999999999999999999999886 5678999999999999999999998652 478999999999987543
Q ss_pred CCHHHH--------HHHhCC--hhHHHHHHHHHhhcCcEEEEc---CcEEEEeCCCC
Q 024564 132 GFYDEC--------LRKYGN--ANIWKIFTDLFDYFPLTALVE---SEIFCLHGGLS 175 (266)
Q Consensus 132 ~~~~e~--------~~~~~~--~~~~~~~~~~~~~lP~~~~i~---~~~l~vHaGi~ 175 (266)
+-.... ...+.. .+.+..+.+|+++||+...+. +++++||||++
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 211001 111111 123456678999999987653 47999999974
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.92 E-value=1.7e-24 Score=184.54 Aligned_cols=119 Identities=23% Similarity=0.339 Sum_probs=92.9
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCC-CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhC
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (266)
+|+++||||||++.+|+++++.+++. ..+.++|+||++||||++.++++++.. .++++|+||||.+++....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998765 467788999999999999999998865 25899999999998876543
Q ss_pred --CHHHHHHHhCC--------hhHHHHHHHHHhhcCcEEEEc---CcEEEEeCCCCCCC
Q 024564 133 --FYDECLRKYGN--------ANIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSI 178 (266)
Q Consensus 133 --~~~e~~~~~~~--------~~~~~~~~~~~~~lP~~~~i~---~~~l~vHaGi~p~~ 178 (266)
...+.....+. ...++.+.+|+++||+...++ .++++||||+++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~ 133 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDD 133 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcch
Confidence 12222223322 124566888999999998764 37999999986553
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.89 E-value=5.1e-23 Score=176.83 Aligned_cols=117 Identities=19% Similarity=0.254 Sum_probs=87.2
Q ss_pred CCCccEeecCCCCHHHHHHHHHhcCCC-CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhh
Q 024564 53 KSPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 131 (266)
.+|++||||||||+++|+++++.+.+. ..+.++|+||+|||||+|.+|++++.+ .++++|+||||.+++....
T Consensus 14 ~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~ 87 (218)
T PRK09968 14 YRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFE 87 (218)
T ss_pred CCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHh
Confidence 359999999999999999999998865 457788999999999999999998853 2588999999999886542
Q ss_pred CCHH--------HHHHHhCCh--hHHHHHHHHHhhcCcEEEEc---CcEEEEeCCCC
Q 024564 132 GFYD--------ECLRKYGNA--NIWKIFTDLFDYFPLTALVE---SEIFCLHGGLS 175 (266)
Q Consensus 132 ~~~~--------e~~~~~~~~--~~~~~~~~~~~~lP~~~~i~---~~~l~vHaGi~ 175 (266)
.-.. +...+.... ........|+++||+...+. .++++||||++
T Consensus 88 ~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 88 TGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred cCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 1000 111111111 12334466999999988653 46999999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.45 E-value=1.3e-12 Score=104.18 Aligned_cols=159 Identities=19% Similarity=0.202 Sum_probs=100.5
Q ss_pred CccEeecCCCCHHHH----HHHHHhcCCCCCCceEeecccccCCCCcHHHHHHH--HHHHhhCCCeEEEEccCchhhhhh
Q 024564 55 PVTICGDIHGQFHDL----AELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLL--VALKVRYPQRITILRGNHESRQIT 128 (266)
Q Consensus 55 ~i~viGDiHG~~~~l----~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l--~~l~~~~p~~v~~lrGNHE~~~~~ 128 (266)
||++|||+|+..... ..+.......+.+.+|++||+++++..+.+..... .......+..+++++||||.....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~ 81 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGN 81 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceec
Confidence 789999999999987 34444444556678889999999999887776654 334444556799999999998755
Q ss_pred hhhCCHHHHHH---------------------------------HhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCC
Q 024564 129 QVYGFYDECLR---------------------------------KYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 175 (266)
Q Consensus 129 ~~~~~~~e~~~---------------------------------~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~ 175 (266)
........... .............+.............++++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~ 161 (200)
T PF00149_consen 82 SFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPY 161 (200)
T ss_dssp HHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSS
T ss_pred cccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCC
Confidence 33211111100 000011112222333333334444568999999886
Q ss_pred CCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCc
Q 024564 176 PSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 248 (266)
Q Consensus 176 p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~ 248 (266)
+........ .....+...+..+++..++++++.||+..
T Consensus 162 ~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 162 SSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp TTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred Ccccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 554321111 12345677889999999999999999864
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.20 E-value=1.6e-10 Score=93.49 Aligned_cols=59 Identities=20% Similarity=0.362 Sum_probs=48.3
Q ss_pred CccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 55 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 55 ~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
|+.++||+||+...+.++++.+.. .+.++++||++++++.+. ++. ...+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCc
Confidence 578999999999999999998754 678889999999998765 121 23489999999985
No 34
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.19 E-value=1.4e-10 Score=94.56 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=49.3
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCC-CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
+++.+|||+||++..+..+++.+... +.+.++++||++ +.+++..+.++. ..+++++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 47899999999998887777666555 567788999998 457777776543 2489999999983
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.13 E-value=2.6e-10 Score=91.72 Aligned_cols=124 Identities=20% Similarity=0.318 Sum_probs=79.6
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCC
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGF 133 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~ 133 (266)
+||+++||+|++...+.++++.+ .+.+.++++||++++ .++++.+... .+++++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 47999999999999999999988 346778889999993 6777777554 49999999997653322110
Q ss_pred HHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCC
Q 024564 134 YDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGW 213 (266)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~ 213 (266)
.. +....... ....+++++|+.+...
T Consensus 69 -----------~~------~~~~~~~~-~~~~~i~~~H~~~~~~------------------------------------ 94 (156)
T PF12850_consen 69 -----------EY------LLDALRLT-IDGFKILLSHGHPYDV------------------------------------ 94 (156)
T ss_dssp -----------CS------SHSEEEEE-ETTEEEEEESSTSSSS------------------------------------
T ss_pred -----------cc------cccceeee-ecCCeEEEECCCCccc------------------------------------
Confidence 00 11111111 1134899999865320
Q ss_pred CcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccce
Q 024564 214 GISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGF 252 (266)
Q Consensus 214 ~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~ 252 (266)
..+.+.+.+.+...++++++-||.-.+.-.
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~ 124 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQVF 124 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEEE
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceEE
Confidence 022445667777899999999999864433
No 36
>PRK09453 phosphodiesterase; Provisional
Probab=99.13 E-value=7.9e-11 Score=98.27 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=55.8
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCC--------cHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY--------SVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~--------s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
+|+.++||+||++.++.++++.+...+.+.++++||++|+|+. +.++++.+..+. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 4789999999999999999988766667889999999999874 456776665442 3599999999975
Q ss_pred h
Q 024564 126 Q 126 (266)
Q Consensus 126 ~ 126 (266)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.11 E-value=6.1e-10 Score=88.34 Aligned_cols=119 Identities=19% Similarity=0.188 Sum_probs=79.3
Q ss_pred CccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcH--HHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhC
Q 024564 55 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (266)
Q Consensus 55 ~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~--evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (266)
++.++||+||++. .....+.+.++++||+++++..+. ++++++.+++ .| .++++.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 5789999999987 122345677888999999876432 3445444432 22 36789999996411
Q ss_pred CHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCCCCC
Q 024564 133 FYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCG 212 (266)
Q Consensus 133 ~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~ 212 (266)
.-+.+++++|+.+.+... ..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~~----------------------~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHLD----------------------LVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCcc----------------------cccc-------
Confidence 114579999985421110 0000
Q ss_pred CCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceee
Q 024564 213 WGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNW 254 (266)
Q Consensus 213 ~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 254 (266)
....|...+.+++++.+.++++-||+..+.|++.
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~~ 121 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAER 121 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCceeE
Confidence 1135566788888899999999999999988874
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.09 E-value=1e-09 Score=95.02 Aligned_cols=113 Identities=20% Similarity=0.244 Sum_probs=73.7
Q ss_pred CccEeecCCCCHHHHH-HHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhh---
Q 024564 55 PVTICGDIHGQFHDLA-ELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV--- 130 (266)
Q Consensus 55 ~i~viGDiHG~~~~l~-~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~--- 130 (266)
+|+++|||||++.... ..++. .+.+.++++||+++ .+.+++..+.++. + .+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~---~~~~~~~~l~~l~--~--p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGN---ESVQLVRAISSLP--L--PKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCc---ChHHHHHHHHhCC--C--CeEEEcCCCcccccccccch
Confidence 6899999999987643 23333 34578889999986 4567777665542 3 38999999998653200
Q ss_pred hCCH------------------------------------------HHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEE
Q 024564 131 YGFY------------------------------------------DECLRKYGNANIWKIFTDLFDYFPLTALVESEIF 168 (266)
Q Consensus 131 ~~~~------------------------------------------~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l 168 (266)
+... .++.+.|+.....+.+...++.++.+.....+++
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0000 1344455555566777778888864333345799
Q ss_pred EEeCCCCCC
Q 024564 169 CLHGGLSPS 177 (266)
Q Consensus 169 ~vHaGi~p~ 177 (266)
+.|+++.-.
T Consensus 152 iaH~~~~G~ 160 (238)
T cd07397 152 LAHNGPSGL 160 (238)
T ss_pred EeCcCCcCC
Confidence 999997533
No 39
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.87 E-value=2.6e-08 Score=76.46 Aligned_cols=117 Identities=21% Similarity=0.315 Sum_probs=81.8
Q ss_pred cEeecCCCCHHHHHHHH--HhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCH
Q 024564 57 TICGDIHGQFHDLAELF--QIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 134 (266)
Q Consensus 57 ~viGDiHG~~~~l~~ll--~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (266)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999888764 33334455778889999999888776554422222233446999999999
Q ss_pred HHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCCC
Q 024564 135 DECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWG 214 (266)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~~ 214 (266)
+++.|+.+.+..... .+..
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~---------------------~~~~-------- 88 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDEL---------------------SPDE-------- 88 (131)
T ss_pred --------------------------------EEEeccCCCCCchhh---------------------cccc--------
Confidence 899998875443110 0000
Q ss_pred cCCCCCceeeCHHHHHHHHHHCCCceEEEcccCccccee
Q 024564 215 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 253 (266)
Q Consensus 215 ~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~ 253 (266)
..........+...+...+|.||+.....+.
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0046677888888999999999999876665
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.82 E-value=9.2e-09 Score=88.64 Aligned_cols=71 Identities=11% Similarity=0.173 Sum_probs=57.7
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
+++.++||+||++..+.++++.....+.+.+|++||++++|+..-++..++..+.... ..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChH
Confidence 4799999999999999999987655556889999999999977777777766664332 2489999999985
No 41
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.82 E-value=1.1e-07 Score=78.84 Aligned_cols=65 Identities=22% Similarity=0.308 Sum_probs=46.1
Q ss_pred ccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCc-HHHHHHHHHHHhhCCCeEEEEccCchhhh
Q 024564 56 VTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-VETVTLLVALKVRYPQRITILRGNHESRQ 126 (266)
Q Consensus 56 i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s-~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (266)
|.++||+||++..+.. ..+...+.+.+|++||++++|... .+.+..+.++ +..++++.||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHH
Confidence 5789999999998876 333334557788899999998753 3333333322 334899999999854
No 42
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.74 E-value=9.3e-08 Score=79.66 Aligned_cols=59 Identities=22% Similarity=0.349 Sum_probs=41.9
Q ss_pred CccEeecCC-CCHH-----HHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 55 PVTICGDIH-GQFH-----DLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 55 ~i~viGDiH-G~~~-----~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .++++++..+. ..+++++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 6533 24444433 34577888999987 67777776552 2489999999973
No 43
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.69 E-value=2.3e-08 Score=87.17 Aligned_cols=71 Identities=17% Similarity=0.214 Sum_probs=48.0
Q ss_pred CCccEeecCCCCH------HHHHHHHHhcCCCCCCceEeecccccC--C-----CCcHHHHHHHHHHHhhCCCeEEEEcc
Q 024564 54 SPVTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDR--G-----YYSVETVTLLVALKVRYPQRITILRG 120 (266)
Q Consensus 54 ~~i~viGDiHG~~------~~l~~ll~~~~~~~~~~~vfLGD~vdr--G-----~~s~evl~~l~~l~~~~p~~v~~lrG 120 (266)
+++++|||+|... ..+.+.++.. ....+.++++||++|. | +...+++..+..+... +..++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 4789999999542 2344555432 2345778889999985 2 2345677777777643 235999999
Q ss_pred Cchhhh
Q 024564 121 NHESRQ 126 (266)
Q Consensus 121 NHE~~~ 126 (266)
|||...
T Consensus 79 NHD~~~ 84 (241)
T PRK05340 79 NRDFLL 84 (241)
T ss_pred CCchhh
Confidence 999743
No 44
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.63 E-value=5.9e-07 Score=70.85 Aligned_cols=107 Identities=19% Similarity=0.135 Sum_probs=73.4
Q ss_pred cEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHH
Q 024564 57 TICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 136 (266)
Q Consensus 57 ~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e 136 (266)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+..++ +..+++++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999998777776654 35568899999983 34556555542 123889999999
Q ss_pred HHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCCCCCCCcC
Q 024564 137 CLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGIS 216 (266)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~~~~~~~~ 216 (266)
.+++++|+-+. ... +...
T Consensus 57 ----------------------------~~Ilv~H~pp~-~~~------------------------~~~~--------- 74 (129)
T cd07403 57 ----------------------------VDILLTHAPPA-GIG------------------------DGED--------- 74 (129)
T ss_pred ----------------------------cCEEEECCCCC-cCc------------------------Cccc---------
Confidence 37899996321 110 0000
Q ss_pred CCCCceeeCHHHHHHHHHHCCCceEEEcccCccccee
Q 024564 217 PRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 253 (266)
Q Consensus 217 ~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~ 253 (266)
...-|...+.+++.+.+.+.++-||...+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011346677888888899999999999877766
No 45
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.49 E-value=2.5e-06 Score=67.91 Aligned_cols=118 Identities=20% Similarity=0.177 Sum_probs=75.1
Q ss_pred ccEeecCCCCHH------H----HHHHHHhcCCCCCCceEeecccccCCCCc--HHHHHHHHHHHhhCCCeEEEEccCch
Q 024564 56 VTICGDIHGQFH------D----LAELFQIGGKCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITILRGNHE 123 (266)
Q Consensus 56 i~viGDiHG~~~------~----l~~ll~~~~~~~~~~~vfLGD~vdrG~~s--~evl~~l~~l~~~~p~~v~~lrGNHE 123 (266)
|+.|+|+|=... . |.++++.+.....+.++++||+++.|... .+...++..+.... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899994211 1 12244444445567788999999987642 12344444444321 24899999999
Q ss_pred hhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccc
Q 024564 124 SRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLL 203 (266)
Q Consensus 124 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dll 203 (266)
. +++.|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 7 88999765332100
Q ss_pred cCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceee
Q 024564 204 WSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNW 254 (266)
Q Consensus 204 W~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 254 (266)
|. . .. . +.+...+++++.++++++.||+-.+..+..
T Consensus 95 ~~-----~----~~-----~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 95 GR-----E----RL-----L-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred cc-----c----cC-----C-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 00 0 00 0 466788888999999999999998766654
No 46
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.45 E-value=3.6e-07 Score=81.05 Aligned_cols=71 Identities=20% Similarity=0.187 Sum_probs=52.9
Q ss_pred CCCccEeecCCCC----HHHHHHHHHhcCCCCCCceEeecccccCC--CCcHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 53 KSPVTICGDIHGQ----FHDLAELFQIGGKCPDTNYLFMGDYVDRG--YYSVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 53 ~~~i~viGDiHG~----~~~l~~ll~~~~~~~~~~~vfLGD~vdrG--~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
..+|+++||+|.. ...+.++++.+...+.+-++++||++|.+ ....++...+..++...| ++.+.||||..
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 3589999999976 55577777766555667888899999943 233456666777765544 99999999974
No 47
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.43 E-value=2.8e-07 Score=78.72 Aligned_cols=71 Identities=21% Similarity=0.196 Sum_probs=52.7
Q ss_pred CCccEeecCCCCHH----HHHHHHHhcCCCCCCceEeecccccCCCCcH-HHHHHHHHHHhhCCCeEEEEccCchhhh
Q 024564 54 SPVTICGDIHGQFH----DLAELFQIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRYPQRITILRGNHESRQ 126 (266)
Q Consensus 54 ~~i~viGDiHG~~~----~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~-evl~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (266)
.++.+++|+|+... .+.++++.+.....+.++++||++|.+.... ++..++..+.... .++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~--~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPL--GVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCC--CEEEECCCccccc
Confidence 57899999998744 6677777665555677888999999887764 5555555554333 4999999999853
No 48
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.43 E-value=4e-07 Score=71.74 Aligned_cols=130 Identities=45% Similarity=0.716 Sum_probs=101.3
Q ss_pred hhhhCCHHHHHHHhCChhHHHH---HHHHHhhcCcEEEEcC-cEEEEeCCCCCCC-CcHHhhhccCCcc--ccCCCCCcc
Q 024564 128 TQVYGFYDECLRKYGNANIWKI---FTDLFDYFPLTALVES-EIFCLHGGLSPSI-ETLDNIRNFDRVQ--EVPHEGPMC 200 (266)
Q Consensus 128 ~~~~~~~~e~~~~~~~~~~~~~---~~~~~~~lP~~~~i~~-~~l~vHaGi~p~~-~~~~~~~~~~r~~--~~~~~~~~~ 200 (266)
...+++..++...++....|.. ..++++.+|+.+.... .++|.|++++|.. ....+++.+.+.. .++..+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~ 83 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTH 83 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccc
Confidence 3445555665566654324555 8999999999988777 8899999999875 6677777777766 667777778
Q ss_pred ccccCCCCC--CCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceeeecCC
Q 024564 201 DLLWSDPDD--RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHVI 258 (266)
Q Consensus 201 dllW~dp~~--~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~ 258 (266)
+.+|+++.. ...|.+.++|....+ ++.+..|+.....+.+.++|+..+.++...+.+
T Consensus 84 ~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~ 142 (155)
T COG0639 84 DLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGG 142 (155)
T ss_pred cccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCC
Confidence 889998874 577888888888777 788888887777777999999999999998874
No 49
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.37 E-value=3.5e-06 Score=72.10 Aligned_cols=162 Identities=18% Similarity=0.154 Sum_probs=87.1
Q ss_pred CccEeecCCC----CHHHHH----HHHHhcCCCCCCceEeecccccCCCCcH--H-HHHHHHHHH-hhCCCeEEEEccCc
Q 024564 55 PVTICGDIHG----QFHDLA----ELFQIGGKCPDTNYLFMGDYVDRGYYSV--E-TVTLLVALK-VRYPQRITILRGNH 122 (266)
Q Consensus 55 ~i~viGDiHG----~~~~l~----~ll~~~~~~~~~~~vfLGD~vdrG~~s~--e-vl~~l~~l~-~~~p~~v~~lrGNH 122 (266)
+++++||+|- ....+. .+.+.+.....+.+|++||+++.+.... + ....+..+. ...| +++++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p--~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIP--YSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCc--EEEECCCC
Confidence 5789999995 222332 3344443344567888999999987432 2 233333443 1233 88999999
Q ss_pred hhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCCCCCCcHHhhhccCCccccCCCCCcccc
Q 024564 123 ESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDL 202 (266)
Q Consensus 123 E~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dl 202 (266)
|.... .... -..+.++.+.+.++..|- ..-++++|-=+.+...
T Consensus 80 D~~~~-ld~~---------~~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~----------------------- 122 (214)
T cd07399 80 DLVLA-LEFG---------PRDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDS----------------------- 122 (214)
T ss_pred cchhh-CCCC---------CCHHHHHHHHHHHHHCCC----CCEEEEecccccCCCC-----------------------
Confidence 94321 1111 012334445555555441 2357889954322110
Q ss_pred ccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHC-CCceEEEcccCcccceeee-----cCCeeeeeec
Q 024564 203 LWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTN-NLKLIARAHQLVMDGFNWA-----HVIFDFQILT 265 (266)
Q Consensus 203 lW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~-~~~~iirgH~~~~~G~~~~-----~~~~~~~~~t 265 (266)
|.+. ...| ....-+.....+.++++ ++++++-||.-.. +.... .++.++|+.+
T Consensus 123 -~~~~--~~~~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~ 181 (214)
T cd07399 123 -RPDS--IDYD------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLA 181 (214)
T ss_pred -cCcc--cccc------cccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEee
Confidence 0000 0000 01123455677888887 8999999997753 33332 2445666654
No 50
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.36 E-value=3.1e-07 Score=75.13 Aligned_cols=67 Identities=21% Similarity=0.134 Sum_probs=45.9
Q ss_pred ccEeecCCCCHHHHHHHHH-hcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 56 VTICGDIHGQFHDLAELFQ-IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 56 i~viGDiHG~~~~l~~ll~-~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
+.++||+|+........+. .....+.+.++++||+++++..+..+. ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 4689999999877765542 233344567888999999887655443 22222 2334699999999986
No 51
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.21 E-value=2.5e-06 Score=74.09 Aligned_cols=68 Identities=22% Similarity=0.194 Sum_probs=48.6
Q ss_pred CccEeecCCCCH------HHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 55 PVTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 55 ~i~viGDiHG~~------~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
+|.+++|+|+++ ..+.++++.+...+.+.+|++||+++..+.+.+++..+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 578999999763 23556666665455677888999999876666666655543 223499999999974
No 52
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.13 E-value=4.8e-05 Score=64.14 Aligned_cols=70 Identities=11% Similarity=0.078 Sum_probs=43.1
Q ss_pred CCccEeecCCCCHH-----------HHHHHHH-hcCCCCCCceEeecccccCCCCc---HHHHHHHHHHHhhCCCeEEEE
Q 024564 54 SPVTICGDIHGQFH-----------DLAELFQ-IGGKCPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYPQRITIL 118 (266)
Q Consensus 54 ~~i~viGDiHG~~~-----------~l~~ll~-~~~~~~~~~~vfLGD~vdrG~~s---~evl~~l~~l~~~~p~~v~~l 118 (266)
.++.+|+|+|-... ...+.++ .+.....+.+|++||+++.+... .+.+..+++......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999996322 1112222 23334457788999999876553 555555544333222348999
Q ss_pred ccCch
Q 024564 119 RGNHE 123 (266)
Q Consensus 119 rGNHE 123 (266)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 53
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.12 E-value=3e-05 Score=64.20 Aligned_cols=65 Identities=14% Similarity=0.208 Sum_probs=44.8
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhh
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 126 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (266)
+++.|+||.||...+-.+..+.....+.+.+|.+||++...+ ...+..- ...+++.++||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~--~~~l~~~------~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT--LDALEGG------LAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc--hHHhhcc------cccceEEEEccCCCcc
Confidence 578999999999975555555544555677888999987543 2222221 1246999999999853
No 54
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.09 E-value=7.6e-06 Score=71.89 Aligned_cols=72 Identities=22% Similarity=0.255 Sum_probs=48.3
Q ss_pred CCccEeecCCC-C-----------HHHHHHHHHhcCCCCCCceEeecccccCCCCcHHH----HHHHHHHHhhCCCeEEE
Q 024564 54 SPVTICGDIHG-Q-----------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVALKVRYPQRITI 117 (266)
Q Consensus 54 ~~i~viGDiHG-~-----------~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~ev----l~~l~~l~~~~p~~v~~ 117 (266)
++++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+. ..++..++...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 47899999993 2 23445555554444567788999999987655443 24444555443345999
Q ss_pred EccCchhh
Q 024564 118 LRGNHESR 125 (266)
Q Consensus 118 lrGNHE~~ 125 (266)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999985
No 55
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.05 E-value=1.1e-05 Score=71.29 Aligned_cols=72 Identities=19% Similarity=0.235 Sum_probs=48.2
Q ss_pred CccEeecCC--C-----------CHHHHHHHHHhcCCCCCCceEeecccccCCCC-cHHHHHHHHHHHhhCCCeEEEEcc
Q 024564 55 PVTICGDIH--G-----------QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRG 120 (266)
Q Consensus 55 ~i~viGDiH--G-----------~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~-s~evl~~l~~l~~~~p~~v~~lrG 120 (266)
|+.+|||+| . ....+.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++++.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 688999999 2 24566777777755556778889999998863 223333333322222234999999
Q ss_pred Cchhhh
Q 024564 121 NHESRQ 126 (266)
Q Consensus 121 NHE~~~ 126 (266)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999853
No 56
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.00 E-value=1.6e-05 Score=76.52 Aligned_cols=73 Identities=22% Similarity=0.331 Sum_probs=45.7
Q ss_pred cCCCccEeecCC-CCH----HHHHHHHHhcC---------CCCCCceEeecccccC-CCCc---------------HHHH
Q 024564 52 VKSPVTICGDIH-GQF----HDLAELFQIGG---------KCPDTNYLFMGDYVDR-GYYS---------------VETV 101 (266)
Q Consensus 52 ~~~~i~viGDiH-G~~----~~l~~ll~~~~---------~~~~~~~vfLGD~vdr-G~~s---------------~evl 101 (266)
.+.++++|||+| |.. ..+..+++.+. ....+.+|++||++|. |+.+ .++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 346799999999 652 23444444332 2234678899999984 3221 1345
Q ss_pred HHHHHHHhhCCCeEEEEccCchhhh
Q 024564 102 TLLVALKVRYPQRITILRGNHESRQ 126 (266)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (266)
.+|.++... -.|++++||||...
T Consensus 322 ~~L~~L~~~--i~V~~ipGNHD~~~ 344 (504)
T PRK04036 322 EYLKQIPED--IKIIISPGNHDAVR 344 (504)
T ss_pred HHHHhhhcC--CeEEEecCCCcchh
Confidence 555555433 24999999999864
No 57
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.98 E-value=1.5e-05 Score=73.07 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=47.7
Q ss_pred CCccEeecCC-CC-----------HHHHHHHHHhcCCCCCCceEeecccccCC-CCcHHHHHHHHH----HHhhCCCeEE
Q 024564 54 SPVTICGDIH-GQ-----------FHDLAELFQIGGKCPDTNYLFMGDYVDRG-YYSVETVTLLVA----LKVRYPQRIT 116 (266)
Q Consensus 54 ~~i~viGDiH-G~-----------~~~l~~ll~~~~~~~~~~~vfLGD~vdrG-~~s~evl~~l~~----l~~~~p~~v~ 116 (266)
+|++.+||+| |. ...|.++++.+.....+.++++||++|+. +.+.+++.++.. .-...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5789999999 41 23445555555555567888999999985 455555444433 1122334699
Q ss_pred EEccCchhh
Q 024564 117 ILRGNHESR 125 (266)
Q Consensus 117 ~lrGNHE~~ 125 (266)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 58
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.96 E-value=1.5e-05 Score=68.91 Aligned_cols=68 Identities=9% Similarity=0.105 Sum_probs=43.5
Q ss_pred ccEeecCCCCH------HHHHHHHHhcCCCCCCceEeecccccCC-----CC--cHHHHHHHHHHHhhCCCeEEEEccCc
Q 024564 56 VTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDRG-----YY--SVETVTLLVALKVRYPQRITILRGNH 122 (266)
Q Consensus 56 i~viGDiHG~~------~~l~~ll~~~~~~~~~~~vfLGD~vdrG-----~~--s~evl~~l~~l~~~~p~~v~~lrGNH 122 (266)
+++|||+|... ..+.+.+..... +.+.++++||++|.. +. ..++...+..+... +..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999543 234444443322 457788899999952 11 13456666666543 34699999999
Q ss_pred hhh
Q 024564 123 ESR 125 (266)
Q Consensus 123 E~~ 125 (266)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 974
No 59
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.90 E-value=3.3e-05 Score=66.60 Aligned_cols=67 Identities=30% Similarity=0.360 Sum_probs=45.3
Q ss_pred CccEeecCCCC------------HHHHHHHHHhcCCC--CCCceEeecccccCCCC-cHH-HHHHHHHHHhhCCCeEEEE
Q 024564 55 PVTICGDIHGQ------------FHDLAELFQIGGKC--PDTNYLFMGDYVDRGYY-SVE-TVTLLVALKVRYPQRITIL 118 (266)
Q Consensus 55 ~i~viGDiHG~------------~~~l~~ll~~~~~~--~~~~~vfLGD~vdrG~~-s~e-vl~~l~~l~~~~p~~v~~l 118 (266)
|++++||+|=. ...+.++++.+... +.+-+|++||+++.|.. ..+ ++..+..+ +..++++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 57899999944 34567777765543 55678889999998652 222 33333333 3348999
Q ss_pred ccCchhh
Q 024564 119 RGNHESR 125 (266)
Q Consensus 119 rGNHE~~ 125 (266)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 60
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.90 E-value=8.8e-05 Score=60.39 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=29.9
Q ss_pred CCCCceEeecccccCCCCc-HHH----HHHHHHHHhhC-CCeEEEEccCchhhh
Q 024564 79 CPDTNYLFMGDYVDRGYYS-VET----VTLLVALKVRY-PQRITILRGNHESRQ 126 (266)
Q Consensus 79 ~~~~~~vfLGD~vdrG~~s-~ev----l~~l~~l~~~~-p~~v~~lrGNHE~~~ 126 (266)
...+.+|++||+++.+..+ .+. +..+.++.... +-.++++.||||...
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 3467889999999987643 222 22233222111 235999999999853
No 61
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.90 E-value=0.00026 Score=62.10 Aligned_cols=71 Identities=17% Similarity=0.035 Sum_probs=42.8
Q ss_pred CccEeecCCCCH----------------HHHHHHHHhcCCC--CCCceEeecccccCCCCcH---HHHHHHHH-HHhh-C
Q 024564 55 PVTICGDIHGQF----------------HDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSV---ETVTLLVA-LKVR-Y 111 (266)
Q Consensus 55 ~i~viGDiHG~~----------------~~l~~ll~~~~~~--~~~~~vfLGD~vdrG~~s~---evl~~l~~-l~~~-~ 111 (266)
+++++||+|-.. ..+.++++.+... ..+.++++||+++.|.... +....+.+ ++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 578888888663 1245555555432 4566888999999887541 11222222 2211 1
Q ss_pred CCeEEEEccCchhh
Q 024564 112 PQRITILRGNHESR 125 (266)
Q Consensus 112 p~~v~~lrGNHE~~ 125 (266)
+-.++.+.||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 22489999999974
No 62
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.85 E-value=3e-05 Score=65.90 Aligned_cols=72 Identities=26% Similarity=0.281 Sum_probs=47.7
Q ss_pred CccEeecCC-CCH--------------HHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHH----HHHHHhhCCCeE
Q 024564 55 PVTICGDIH-GQF--------------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTL----LVALKVRYPQRI 115 (266)
Q Consensus 55 ~i~viGDiH-G~~--------------~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~----l~~l~~~~p~~v 115 (266)
|++.++|+| |.. ..|.++++.+.....+.+|++||+++....+.+.+.. +.+++. ....+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 578999999 322 2356666665555567788999999987655544333 333321 13359
Q ss_pred EEEccCchhhhh
Q 024564 116 TILRGNHESRQI 127 (266)
Q Consensus 116 ~~lrGNHE~~~~ 127 (266)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999998654
No 63
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.84 E-value=6.5e-05 Score=62.00 Aligned_cols=58 Identities=14% Similarity=0.129 Sum_probs=33.9
Q ss_pred HHHHHHhcCCCCCCceEeecccccCCCCc-HHHHHHH-HHHHhhCCCeEEEEccCchhhh
Q 024564 69 LAELFQIGGKCPDTNYLFMGDYVDRGYYS-VETVTLL-VALKVRYPQRITILRGNHESRQ 126 (266)
Q Consensus 69 l~~ll~~~~~~~~~~~vfLGD~vdrG~~s-~evl~~l-~~l~~~~p~~v~~lrGNHE~~~ 126 (266)
+.++.+.+...+.+.+|++||+++....+ .+....+ .......+-.+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 34444444445568899999999865433 2222221 1111123346999999999853
No 64
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.79 E-value=4.7e-05 Score=67.56 Aligned_cols=71 Identities=13% Similarity=0.076 Sum_probs=46.6
Q ss_pred CCCccEeecCC-C-----------CHHHHHHHHHhcCCC--CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEE
Q 024564 53 KSPVTICGDIH-G-----------QFHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 118 (266)
Q Consensus 53 ~~~i~viGDiH-G-----------~~~~l~~ll~~~~~~--~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~l 118 (266)
..+++.|+|+| . ....|.++++.+... +.+-+|+.||+++.|. .+-+..+.+.-...+..++++
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 35899999999 1 245677778766432 3467888999999774 233333332222223459999
Q ss_pred ccCchhh
Q 024564 119 RGNHESR 125 (266)
Q Consensus 119 rGNHE~~ 125 (266)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999973
No 65
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.78 E-value=3.5e-05 Score=63.38 Aligned_cols=67 Identities=25% Similarity=0.373 Sum_probs=43.9
Q ss_pred ccEeecCCCCHHHH---------------HHHHHhcC--CCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEE
Q 024564 56 VTICGDIHGQFHDL---------------AELFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 118 (266)
Q Consensus 56 i~viGDiHG~~~~l---------------~~ll~~~~--~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~l 118 (266)
+++|+|+|=....- ..+++.+. ..+.+.++++||+++++..+.. +..+.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 47899999665532 22333322 2345788899999999886544 4444433 2359999
Q ss_pred ccCchhhhh
Q 024564 119 RGNHESRQI 127 (266)
Q Consensus 119 rGNHE~~~~ 127 (266)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999998644
No 66
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.77 E-value=0.00048 Score=60.56 Aligned_cols=70 Identities=21% Similarity=0.082 Sum_probs=41.7
Q ss_pred ccEeecCCCCHH------HH-HHHHHhcCCCCCCceEeecccccCCCCc-------HHHH-HHHHHHH---hhCCCeEEE
Q 024564 56 VTICGDIHGQFH------DL-AELFQIGGKCPDTNYLFMGDYVDRGYYS-------VETV-TLLVALK---VRYPQRITI 117 (266)
Q Consensus 56 i~viGDiHG~~~------~l-~~ll~~~~~~~~~~~vfLGD~vdrG~~s-------~evl-~~l~~l~---~~~p~~v~~ 117 (266)
++.++|+|-... .. ..+++.+.....+.+|++||++|+.... .+-. .++..++ ...+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 467999996322 12 3344555445567888999999976521 1111 2222222 222346899
Q ss_pred EccCchhh
Q 024564 118 LRGNHESR 125 (266)
Q Consensus 118 lrGNHE~~ 125 (266)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999995
No 67
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.68 E-value=0.00072 Score=57.73 Aligned_cols=75 Identities=21% Similarity=0.251 Sum_probs=55.0
Q ss_pred CCCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccc--cCCCCcHHHHH-HHHHHHhhCCCeEEEEccCchhhhhh
Q 024564 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYV--DRGYYSVETVT-LLVALKVRYPQRITILRGNHESRQIT 128 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~v--drG~~s~evl~-~l~~l~~~~p~~v~~lrGNHE~~~~~ 128 (266)
.+++.+++|+||.++.+.+++..++....+-+++.||+. +.|+.-...-+ .+..++.. --.++.++||.|...+.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~-~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKEL-GIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhc-CCeEEEEcCCCChHHHH
Confidence 468999999999999999999988776778888899999 87775322221 13333322 13499999998887543
No 68
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.67 E-value=0.00012 Score=63.16 Aligned_cols=69 Identities=17% Similarity=0.202 Sum_probs=43.7
Q ss_pred CCccEeecCC-CCHHHH----------------HHHHHhcCCCCCCceEeecccccCCCC---cHHHHHHHHHHHhhCCC
Q 024564 54 SPVTICGDIH-GQFHDL----------------AELFQIGGKCPDTNYLFMGDYVDRGYY---SVETVTLLVALKVRYPQ 113 (266)
Q Consensus 54 ~~i~viGDiH-G~~~~l----------------~~ll~~~~~~~~~~~vfLGD~vdrG~~---s~evl~~l~~l~~~~p~ 113 (266)
.++.+|+|+| |--..+ .++.+.+...+.+.+|++||+.+.... ..++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 5789999999 543322 223333333446789999999975543 223334444332 3
Q ss_pred eEEEEccCchhhh
Q 024564 114 RITILRGNHESRQ 126 (266)
Q Consensus 114 ~v~~lrGNHE~~~ 126 (266)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 5999999999754
No 69
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.67 E-value=0.00012 Score=64.68 Aligned_cols=70 Identities=16% Similarity=0.227 Sum_probs=44.3
Q ss_pred ccEeecCCCCHHHHHHHHHhc---CCCCCCceEeecccccCCCCc-HHH----------HHHHHHH--HhhCCCeEEEEc
Q 024564 56 VTICGDIHGQFHDLAELFQIG---GKCPDTNYLFMGDYVDRGYYS-VET----------VTLLVAL--KVRYPQRITILR 119 (266)
Q Consensus 56 i~viGDiHG~~~~l~~ll~~~---~~~~~~~~vfLGD~vdrG~~s-~ev----------l~~l~~l--~~~~p~~v~~lr 119 (266)
|+|+||+||+++.+.+.++.. ...+.+-+|++||+-..+..+ .+. .++..-+ ....|--+++|-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 689999999999987755433 234567788899996544332 222 1221111 222454579999
Q ss_pred cCchhh
Q 024564 120 GNHESR 125 (266)
Q Consensus 120 GNHE~~ 125 (266)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 70
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.63 E-value=0.00012 Score=63.40 Aligned_cols=66 Identities=21% Similarity=0.261 Sum_probs=39.8
Q ss_pred ccEeecCCCC---------H-----HHHHHHHHhcC--CCCCCceEeecccccCCCCc--HHHHHHHHHHHhhCCCeEEE
Q 024564 56 VTICGDIHGQ---------F-----HDLAELFQIGG--KCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITI 117 (266)
Q Consensus 56 i~viGDiHG~---------~-----~~l~~ll~~~~--~~~~~~~vfLGD~vdrG~~s--~evl~~l~~l~~~~p~~v~~ 117 (266)
|++++|||-. + +.+.++.+.+. .++.+-+|+.||++++++.. .+.+.+|.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 5789999965 1 22223333221 13567778899999876532 2334433332 234899
Q ss_pred EccCchhh
Q 024564 118 LRGNHESR 125 (266)
Q Consensus 118 lrGNHE~~ 125 (266)
+.||||..
T Consensus 77 V~GNHD~~ 84 (232)
T cd07393 77 LKGNHDYW 84 (232)
T ss_pred EeCCcccc
Confidence 99999973
No 71
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.61 E-value=0.00015 Score=67.77 Aligned_cols=55 Identities=16% Similarity=0.181 Sum_probs=42.7
Q ss_pred CCCccEeecCCCC------------HHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHH
Q 024564 53 KSPVTICGDIHGQ------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVAL 107 (266)
Q Consensus 53 ~~~i~viGDiHG~------------~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l 107 (266)
.+||..++|+|-- +..|.++++.+.....+-+|+.||++|+..-|.+++..++.+
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~ 69 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRS 69 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHH
Confidence 4689999999942 456777888776666677888999999998898877665543
No 72
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.55 E-value=0.00028 Score=62.19 Aligned_cols=74 Identities=20% Similarity=0.267 Sum_probs=51.7
Q ss_pred CCccEeecCCCC------HHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHh--hCCCeEEEEccCchhh
Q 024564 54 SPVTICGDIHGQ------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKV--RYPQRITILRGNHESR 125 (266)
Q Consensus 54 ~~i~viGDiHG~------~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~--~~p~~v~~lrGNHE~~ 125 (266)
.+++.|+|+|-. ...+.++++.+...+.+-+|+.||+.+.|. .+-...+.++-. ..|..+++++||||..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 368899999987 345566777777666688999999999953 222333332222 4556699999999997
Q ss_pred hhhh
Q 024564 126 QITQ 129 (266)
Q Consensus 126 ~~~~ 129 (266)
....
T Consensus 79 ~~~~ 82 (301)
T COG1409 79 VVNG 82 (301)
T ss_pred chHH
Confidence 6543
No 73
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.49 E-value=0.00025 Score=60.17 Aligned_cols=29 Identities=3% Similarity=-0.038 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHCCCceEEEcccCccccee
Q 024564 225 GQDISEQFNHTNNLKLIARAHQLVMDGFN 253 (266)
Q Consensus 225 G~~~~~~fl~~~~~~~iirgH~~~~~G~~ 253 (266)
....+.+.++..+++.+|.||+..+.-.+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 35556667788999999999998765444
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.48 E-value=0.00019 Score=67.31 Aligned_cols=71 Identities=24% Similarity=0.292 Sum_probs=45.6
Q ss_pred CCccEeecCCC-C-H------HH----HHHHHHhcCCCCCCceEeecccccCCCCcHHH---H-HHHHHHHhhCCCeEEE
Q 024564 54 SPVTICGDIHG-Q-F------HD----LAELFQIGGKCPDTNYLFMGDYVDRGYYSVET---V-TLLVALKVRYPQRITI 117 (266)
Q Consensus 54 ~~i~viGDiHG-~-~------~~----l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~ev---l-~~l~~l~~~~p~~v~~ 117 (266)
++++.++|+|- . + .+ +..+.+.+.....+.+|++||++|++..+... + .++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 47899999993 2 1 11 23344444445567788999999997655433 2 334444432 234999
Q ss_pred EccCchhh
Q 024564 118 LRGNHESR 125 (266)
Q Consensus 118 lrGNHE~~ 125 (266)
+.||||..
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999975
No 75
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.45 E-value=0.00021 Score=63.80 Aligned_cols=73 Identities=19% Similarity=0.141 Sum_probs=51.2
Q ss_pred CCCccEeecCCCCHHH--HHHHHHhcCCCCCCceEeecccccC--CCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhh
Q 024564 53 KSPVTICGDIHGQFHD--LAELFQIGGKCPDTNYLFMGDYVDR--GYYSVETVTLLVALKVRYPQRITILRGNHESRQI 127 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~--l~~ll~~~~~~~~~~~vfLGD~vdr--G~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 127 (266)
.-+|+.++|+|-+... ..+.+..+.....+-+++.||++|+ -+....++..+..|+..+ .++++.||||...-
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~~ 120 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGVD 120 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEecccccccc
Confidence 3479999999988765 2223333333333777789999995 445556777888887554 49999999988643
No 76
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.41 E-value=0.0002 Score=62.34 Aligned_cols=68 Identities=19% Similarity=0.254 Sum_probs=39.4
Q ss_pred cEeecCC--CCH---HHHHHHHHhcCCC-----CCCceEeecccccCCCC------------c----HHHHHHHHHHHhh
Q 024564 57 TICGDIH--GQF---HDLAELFQIGGKC-----PDTNYLFMGDYVDRGYY------------S----VETVTLLVALKVR 110 (266)
Q Consensus 57 ~viGDiH--G~~---~~l~~ll~~~~~~-----~~~~~vfLGD~vdrG~~------------s----~evl~~l~~l~~~ 110 (266)
++|||+| +.. ..+..+++.+... ..+.+|++||++|+... . .++..++.++...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 6899999 332 2233444433221 23678889999997310 0 1233344444322
Q ss_pred CCCeEEEEccCchhhh
Q 024564 111 YPQRITILRGNHESRQ 126 (266)
Q Consensus 111 ~p~~v~~lrGNHE~~~ 126 (266)
-.|+++.||||...
T Consensus 82 --~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 --IKIIIIPGNHDAVR 95 (243)
T ss_pred --CeEEEeCCCCCccc
Confidence 35999999999853
No 77
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.33 E-value=0.00021 Score=63.67 Aligned_cols=69 Identities=20% Similarity=0.219 Sum_probs=41.9
Q ss_pred CCccEeecCCCC----HHHHHHHHHhcCCCCCCceEeecccccCCCCc-----HHHHHHHHHHHhhCCCeEEEEccCchh
Q 024564 54 SPVTICGDIHGQ----FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHES 124 (266)
Q Consensus 54 ~~i~viGDiHG~----~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s-----~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (266)
-+++++||.|.. ...+.++.+. ..+.+-++++||+++.+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 478999999952 2233333332 23456688899999544322 223333333433455 8999999998
Q ss_pred hh
Q 024564 125 RQ 126 (266)
Q Consensus 125 ~~ 126 (266)
..
T Consensus 81 ~~ 82 (294)
T cd00839 81 DY 82 (294)
T ss_pred cc
Confidence 64
No 78
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.21 E-value=0.0023 Score=55.16 Aligned_cols=175 Identities=13% Similarity=0.144 Sum_probs=88.7
Q ss_pred cEeecCCCC------HHHHHHHHHhcCCCCCCceEeecccccC--CCC-c----HHHHHHHHHHHhhCCCeEEEEccCch
Q 024564 57 TICGDIHGQ------FHDLAELFQIGGKCPDTNYLFMGDYVDR--GYY-S----VETVTLLVALKVRYPQRITILRGNHE 123 (266)
Q Consensus 57 ~viGDiHG~------~~~l~~ll~~~~~~~~~~~vfLGD~vdr--G~~-s----~evl~~l~~l~~~~p~~v~~lrGNHE 123 (266)
+.|||+|=. .+.|.+.|+.... ..+.++++||++|- |.+ . .+|...|..+.. ...+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~-~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAA-QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR-KGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccc-cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh-cCCeEEEecCchH
Confidence 468999954 3334455554332 45778889999862 332 1 345555555533 3457999999999
Q ss_pred hhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEE---EcCcEEEEeCCCCCCCCc-HHhhhccCC-------ccc
Q 024564 124 SRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTAL---VESEIFCLHGGLSPSIET-LDNIRNFDR-------VQE 192 (266)
Q Consensus 124 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~---i~~~~l~vHaGi~p~~~~-~~~~~~~~r-------~~~ 192 (266)
..+ ...+ ....|. +.-+|-... -+.+++++||..--.... -...+.... +..
T Consensus 79 fll-~~~f------~~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lfln 141 (237)
T COG2908 79 FLL-GKRF------AQEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLN 141 (237)
T ss_pred HHH-HHHH------HhhcCc----------eEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHH
Confidence 543 2211 112221 222332222 246899999975211100 000000000 000
Q ss_pred cCCC--CCccccccCCCCCCCCCCcCCCCCc--e-eeCHHHHHHHHHHCCCceEEEcccCcccceee
Q 024564 193 VPHE--GPMCDLLWSDPDDRCGWGISPRGAG--Y-TFGQDISEQFNHTNNLKLIARAHQLVMDGFNW 254 (266)
Q Consensus 193 ~~~~--~~~~dllW~dp~~~~~~~~~~rg~~--~-~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 254 (266)
.|.. .....-+|+.. .|........ + -.....+.+-+++++++.+|.||+..+..-..
T Consensus 142 l~l~~R~ri~~k~r~~s----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i 204 (237)
T COG2908 142 LPLRVRRRIAYKIRSLS----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNI 204 (237)
T ss_pred hHHHHHHHHHHHHHHhh----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccC
Confidence 0000 00112234422 2222211111 1 24577788889999999999999987655444
No 79
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.11 E-value=0.026 Score=49.71 Aligned_cols=33 Identities=12% Similarity=0.031 Sum_probs=28.5
Q ss_pred eeCHHHHHHHHHHCCCceEEEcccCcccceeeecC
Q 024564 223 TFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHV 257 (266)
Q Consensus 223 ~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~ 257 (266)
+-..+.++..|+..+-.+|+-||+. ++.+..|.
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h~ 234 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDDH--DYCEVVHE 234 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCCC--ccceeEcc
Confidence 3678999999999999999999995 77777775
No 80
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.04 E-value=0.0012 Score=55.71 Aligned_cols=47 Identities=19% Similarity=0.342 Sum_probs=34.4
Q ss_pred CCCCceEeecccccCCCCc--HHHHHHHHHHHhhCC----CeEEEEccCchhh
Q 024564 79 CPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYP----QRITILRGNHESR 125 (266)
Q Consensus 79 ~~~~~~vfLGD~vdrG~~s--~evl~~l~~l~~~~p----~~v~~lrGNHE~~ 125 (266)
-..+-++|+||++|.|+.+ .+..+.+..++..++ ..+++|.||||.-
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 3567889999999999964 336666666654322 2588999999974
No 81
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.99 E-value=0.0013 Score=49.03 Aligned_cols=51 Identities=18% Similarity=0.123 Sum_probs=38.1
Q ss_pred CCCCC-CCCChhcHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc
Q 024564 2 GANSL-STDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV 52 (266)
Q Consensus 2 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~ 52 (266)
|.|.- .+.|.+.+.+|+++|++++.|+...+..|+.++.++|+++|+++++
T Consensus 44 GP~l~~~~it~efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 44 GPRLEDEPITLEFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp SS--BTTB--HHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 34443 6889999999999999999999999999999999999999999864
No 82
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.99 E-value=0.00053 Score=58.70 Aligned_cols=74 Identities=16% Similarity=0.222 Sum_probs=44.6
Q ss_pred CCCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHH--------------------------HHHHH
Q 024564 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETV--------------------------TLLVA 106 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl--------------------------~~l~~ 106 (266)
..+|.+++|.||+++.+.++...+.....+-++|+||++-....+.|-. .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 3579999999999999999988776666788999999985544443333 33333
Q ss_pred HHhhCCCeEEEEccCchhhhh
Q 024564 107 LKVRYPQRITILRGNHESRQI 127 (266)
Q Consensus 107 l~~~~p~~v~~lrGNHE~~~~ 127 (266)
|. ..+--+++|+||||....
T Consensus 85 L~-~~~~p~~~vPG~~Dap~~ 104 (255)
T PF14582_consen 85 LG-ELGVPVFVVPGNMDAPER 104 (255)
T ss_dssp HH-CC-SEEEEE--TTS-SHH
T ss_pred HH-hcCCcEEEecCCCCchHH
Confidence 33 233458999999999543
No 83
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.96 E-value=0.002 Score=53.27 Aligned_cols=49 Identities=22% Similarity=0.257 Sum_probs=31.6
Q ss_pred CCCCCceEeecccccCCCCcH--H---HHHHHHHHHhhC-----CCeEEEEccCchhhh
Q 024564 78 KCPDTNYLFMGDYVDRGYYSV--E---TVTLLVALKVRY-----PQRITILRGNHESRQ 126 (266)
Q Consensus 78 ~~~~~~~vfLGD~vdrG~~s~--e---vl~~l~~l~~~~-----p~~v~~lrGNHE~~~ 126 (266)
..+.+.+|++||++|.+.... + .+..+.++.... +-.++++.||||...
T Consensus 43 ~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 43 RLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred hcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 345678999999999877432 2 333333332111 345999999999964
No 84
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.92 E-value=0.0022 Score=51.76 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=42.5
Q ss_pred CccEeecCCC------------CHHHHHH-HHHhcC--CCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEc
Q 024564 55 PVTICGDIHG------------QFHDLAE-LFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILR 119 (266)
Q Consensus 55 ~i~viGDiHG------------~~~~l~~-ll~~~~--~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lr 119 (266)
.++++||.|= +.+.... ++.... ..|.+.+.+|||+.-.--+..+..+.+..| |+++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEee
Confidence 4688999984 3333333 333222 245677889999986444444444444444 57899999
Q ss_pred cCchhh
Q 024564 120 GNHESR 125 (266)
Q Consensus 120 GNHE~~ 125 (266)
||||-.
T Consensus 81 GNhDk~ 86 (186)
T COG4186 81 GNHDKC 86 (186)
T ss_pred CCCCCC
Confidence 999985
No 85
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.89 E-value=0.0013 Score=57.23 Aligned_cols=66 Identities=29% Similarity=0.346 Sum_probs=43.3
Q ss_pred CccEeecCCCCH---------HHHHHHHHhcCCCCCC-ceEeecccccCCCCcH-----HHHHHHHHHHhhCCCeEEEEc
Q 024564 55 PVTICGDIHGQF---------HDLAELFQIGGKCPDT-NYLFMGDYVDRGYYSV-----ETVTLLVALKVRYPQRITILR 119 (266)
Q Consensus 55 ~i~viGDiHG~~---------~~l~~ll~~~~~~~~~-~~vfLGD~vdrG~~s~-----evl~~l~~l~~~~p~~v~~lr 119 (266)
+|+.++|+||.+ ..+..+++.......+ -++..||+++..+.+. .+++.+..+. .. ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----YD-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----CC-EEee
Confidence 578999999887 4566667665443334 4456899999877643 4555554442 22 3456
Q ss_pred cCchhh
Q 024564 120 GNHESR 125 (266)
Q Consensus 120 GNHE~~ 125 (266)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999973
No 86
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.87 E-value=0.0022 Score=51.87 Aligned_cols=66 Identities=24% Similarity=0.349 Sum_probs=46.4
Q ss_pred cEeecCCCCHHHHHHHHHhcC--CCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCch
Q 024564 57 TICGDIHGQFHDLAELFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (266)
Q Consensus 57 ~viGDiHG~~~~l~~ll~~~~--~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 123 (266)
.|+||+||+++.+.+-++.+. ..+-+.++++||+..-...+-+. .-...-....|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~-~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEEL-EAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhH-HHHhcCCccCCCCEEEECCCCC
Confidence 489999999999987766532 23446788899998765555333 3333334456666999999998
No 87
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.78 E-value=0.0035 Score=58.38 Aligned_cols=73 Identities=21% Similarity=0.239 Sum_probs=50.6
Q ss_pred CCccEeecCCCC-------------HHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHH-HhhC--CCeEEE
Q 024564 54 SPVTICGDIHGQ-------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVAL-KVRY--PQRITI 117 (266)
Q Consensus 54 ~~i~viGDiHG~-------------~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l-~~~~--p~~v~~ 117 (266)
+|+..++|.|=- +..|..+++.+.....+-+|+.||++|+..-|.+++..+.+. +... .-.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 477888999954 334555566655555677888999999988787766655543 2222 124999
Q ss_pred EccCchhhh
Q 024564 118 LRGNHESRQ 126 (266)
Q Consensus 118 lrGNHE~~~ 126 (266)
|.||||..-
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999964
No 88
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.64 E-value=0.0042 Score=53.65 Aligned_cols=103 Identities=19% Similarity=0.249 Sum_probs=60.7
Q ss_pred cCCCccEeecCCCCHHHHH----------------HHHH-hcCCCCCCceEeecccccCCCCc-----HHHHHHHHHHHh
Q 024564 52 VKSPVTICGDIHGQFHDLA----------------ELFQ-IGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKV 109 (266)
Q Consensus 52 ~~~~i~viGDiHG~~~~l~----------------~ll~-~~~~~~~~~~vfLGD~vdrG~~s-----~evl~~l~~l~~ 109 (266)
...++.|++|+|=-|.... +.++ .+.....+++|++||+-.-.+.+ .++-.++..++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 4568999999997665443 2232 22334467899999997544332 334444444433
Q ss_pred hCCCeEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcCcEEEEeCCCCCCC
Q 024564 110 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSI 178 (266)
Q Consensus 110 ~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~ 178 (266)
. .+++++||||...-....++ + ...++.. . .++++++||=-.+..
T Consensus 98 ~---evi~i~GNHD~~i~~~~~~~--------~-----------v~v~~~~-~-i~~~~~~HGh~~~~~ 142 (235)
T COG1407 98 R---EVIIIRGNHDNGIEEILPGF--------N-----------VEVVDEL-E-IGGLLFRHGHKEPEP 142 (235)
T ss_pred C---cEEEEeccCCCccccccccC--------C-----------ceeeeeE-E-ecCEEEEeCCCCCcc
Confidence 2 49999999999643322222 1 1222323 2 358999998655443
No 89
>PLN02533 probable purple acid phosphatase
Probab=96.42 E-value=0.0036 Score=59.14 Aligned_cols=71 Identities=18% Similarity=0.259 Sum_probs=42.7
Q ss_pred CCCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcH---HHHHHHHHHHhhCCCeEEEEccCchhhh
Q 024564 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRYPQRITILRGNHESRQ 126 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~---evl~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (266)
.-+++++||+|-. ......++.+.....+-++++||+++-+.... +..+++..+....| ++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 4579999999632 22223444444445677888999987543321 12233333333455 889999999853
No 90
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.31 E-value=0.0043 Score=54.99 Aligned_cols=66 Identities=21% Similarity=0.261 Sum_probs=40.3
Q ss_pred CccEeecCCCCH----------------HHHHHHHHhcCCCCCCceEe-ecccccCCCCc-----------HHHHHHHHH
Q 024564 55 PVTICGDIHGQF----------------HDLAELFQIGGKCPDTNYLF-MGDYVDRGYYS-----------VETVTLLVA 106 (266)
Q Consensus 55 ~i~viGDiHG~~----------------~~l~~ll~~~~~~~~~~~vf-LGD~vdrG~~s-----------~evl~~l~~ 106 (266)
+|+.++|+||++ ..+..++++......+.+++ .||+++..+.+ ..+++.+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999996 33555666554333344444 79999865422 235555555
Q ss_pred HHhhCCCeEEEEccCchhh
Q 024564 107 LKVRYPQRITILRGNHESR 125 (266)
Q Consensus 107 l~~~~p~~v~~lrGNHE~~ 125 (266)
+. + . ++..||||..
T Consensus 82 ~g---~-d-~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y-D-AGTLGNHEFN 95 (277)
T ss_pred cC---C-C-EEeecccCcc
Confidence 53 2 2 4556999963
No 91
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.92 E-value=0.022 Score=48.04 Aligned_cols=66 Identities=15% Similarity=0.185 Sum_probs=40.7
Q ss_pred ecCCCCHHHHHHHHHhcC-CCCCCceEeecccccCCCCcHH-HHHHHHHHHhhC---------------------CCeEE
Q 024564 60 GDIHGQFHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSVE-TVTLLVALKVRY---------------------PQRIT 116 (266)
Q Consensus 60 GDiHG~~~~l~~ll~~~~-~~~~~~~vfLGD~vdrG~~s~e-vl~~l~~l~~~~---------------------p~~v~ 116 (266)
=|++|+=.-|.+.++.+. .-..+.++||||++|.|--+-+ --....+.+..+ ...++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 355666666666666443 2345778899999998753322 233344433322 13578
Q ss_pred EEccCchhh
Q 024564 117 ILRGNHESR 125 (266)
Q Consensus 117 ~lrGNHE~~ 125 (266)
.|.||||.-
T Consensus 103 ~V~GNHDIG 111 (193)
T cd08164 103 NIAGNHDVG 111 (193)
T ss_pred EECCcccCC
Confidence 999999994
No 92
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=95.84 E-value=0.0042 Score=58.36 Aligned_cols=115 Identities=14% Similarity=0.038 Sum_probs=93.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccC----CCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHH
Q 024564 26 PLSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETV 101 (266)
Q Consensus 26 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~----~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl 101 (266)
.+...++..+++.+.+++..+|+..... .-.+.++|.||.+.++.++++.- ..-..-|++=|++++++....+.+
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d-P~~~K~Y~rrg~a~m~l~~~~~A~ 92 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD-PTYIKAYVRRGTAVMALGEFKKAL 92 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC-chhhheeeeccHHHHhHHHHHHHH
Confidence 4667888999999999999999876432 34789999999999999988753 112345888999999999999999
Q ss_pred HHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHHHHHHHh
Q 024564 102 TLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKY 141 (266)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~ 141 (266)
..+...+...|+...+.|++||...+-..++|..++...+
T Consensus 93 ~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~ 132 (476)
T KOG0376|consen 93 LDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPE 132 (476)
T ss_pred HHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCc
Confidence 9999999999999999999999988777666665444333
No 93
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.61 E-value=0.024 Score=49.97 Aligned_cols=69 Identities=23% Similarity=0.289 Sum_probs=39.2
Q ss_pred CccEeecCCCC--H--HHHHHHHH-hcCCCCCCceEeecccc-cCCCCcH------HHHHHHHH-HHhhCCCeEEEEccC
Q 024564 55 PVTICGDIHGQ--F--HDLAELFQ-IGGKCPDTNYLFMGDYV-DRGYYSV------ETVTLLVA-LKVRYPQRITILRGN 121 (266)
Q Consensus 55 ~i~viGDiHG~--~--~~l~~ll~-~~~~~~~~~~vfLGD~v-drG~~s~------evl~~l~~-l~~~~p~~v~~lrGN 121 (266)
+++++||.-.. . .++.+.+. .+...+.+-+|++||++ +-|..+. +.+..++. +....| ++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P--~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP--WYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC--eEEecCC
Confidence 57899998764 2 23333333 33334456688999987 5554221 22222222 222233 8999999
Q ss_pred chhh
Q 024564 122 HESR 125 (266)
Q Consensus 122 HE~~ 125 (266)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9986
No 94
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.43 E-value=0.019 Score=50.44 Aligned_cols=65 Identities=23% Similarity=0.243 Sum_probs=39.8
Q ss_pred CccEeecCCCCH----------HHHHHHHHhcCCCCCCceEeecccccCCCCc-----HHHHHHHHHHHhhCCCeEEEEc
Q 024564 55 PVTICGDIHGQF----------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILR 119 (266)
Q Consensus 55 ~i~viGDiHG~~----------~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s-----~evl~~l~~l~~~~p~~v~~lr 119 (266)
+|+.++|+||++ ..+..++++....++.-++..||.++..+.+ ..+++.+..+. -.+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE-Ecc
Confidence 578899999985 3455566655433444455589999865533 23444444432 124 456
Q ss_pred cCchh
Q 024564 120 GNHES 124 (266)
Q Consensus 120 GNHE~ 124 (266)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99996
No 95
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.06 E-value=0.034 Score=49.73 Aligned_cols=66 Identities=24% Similarity=0.344 Sum_probs=41.5
Q ss_pred CccEeecCCCCHH--------------HHHHHHHhcCCCC-CCceEeecccccCCCC-c-----HHHHHHHHHHHhhCCC
Q 024564 55 PVTICGDIHGQFH--------------DLAELFQIGGKCP-DTNYLFMGDYVDRGYY-S-----VETVTLLVALKVRYPQ 113 (266)
Q Consensus 55 ~i~viGDiHG~~~--------------~l~~ll~~~~~~~-~~~~vfLGD~vdrG~~-s-----~evl~~l~~l~~~~p~ 113 (266)
+|+.++|+||++. .+..+++...... +.-++..||++...+. + ..+++.+.++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 5788999999854 3555666554333 3345558999976554 2 2456666666422
Q ss_pred eEEEEccCchhh
Q 024564 114 RITILRGNHESR 125 (266)
Q Consensus 114 ~v~~lrGNHE~~ 125 (266)
.+..||||.-
T Consensus 79 --a~t~GNHefd 88 (288)
T cd07412 79 --ASAVGNHEFD 88 (288)
T ss_pred --eeeecccccc
Confidence 3556999963
No 96
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=94.96 E-value=0.023 Score=55.22 Aligned_cols=44 Identities=23% Similarity=0.311 Sum_probs=37.0
Q ss_pred CCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhh
Q 024564 81 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 129 (266)
Q Consensus 81 ~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 129 (266)
.+++-++||+.||||.+-.+++.|+.. .+|=+-.||||...+..
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMGA 228 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMGA 228 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHHH
Confidence 477889999999999999999999865 25778899999976543
No 97
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.51 E-value=0.21 Score=40.14 Aligned_cols=116 Identities=23% Similarity=0.375 Sum_probs=76.3
Q ss_pred ccEeecCCC--CHHHHHHHHHhcCCCCC-CceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhC
Q 024564 56 VTICGDIHG--QFHDLAELFQIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (266)
Q Consensus 56 i~viGDiHG--~~~~l~~ll~~~~~~~~-~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (266)
+.++||+|= ...+|-.-|+++-.+.+ ..++++|++. |.|++++|..+. ++++++||--|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 578999984 33344334444334443 6788999975 568999998875 4699999987763
Q ss_pred CHHHHHHHhCChhHHHHHHHHHhhcCcEEE--Ec-CcEEEEeCCCCCCCCcHHhhhccCCccccCCCCCccccccCCCCC
Q 024564 133 FYDECLRKYGNANIWKIFTDLFDYFPLTAL--VE-SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD 209 (266)
Q Consensus 133 ~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~--i~-~~~l~vHaGi~p~~~~~~~~~~~~r~~~~~~~~~~~dllW~dp~~ 209 (266)
.+| |..-+ ++ -++-++||-. -+-|.||
T Consensus 67 ------~~y----------------P~~kvvtvGqfkIG~chGhq--------------------------ViP~gd~-- 96 (183)
T KOG3325|consen 67 ------LKY----------------PENKVVTVGQFKIGLCHGHQ--------------------------VIPWGDP-- 96 (183)
T ss_pred ------ccC----------------CccceEEeccEEEEeecCcE--------------------------eecCCCH--
Confidence 112 21111 12 2788999742 1345555
Q ss_pred CCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceee
Q 024564 210 RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNW 254 (266)
Q Consensus 210 ~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 254 (266)
.++....++.+++.++-||+..-+.|+.
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 3566677888999999999988777764
No 98
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.49 E-value=0.05 Score=47.90 Aligned_cols=65 Identities=23% Similarity=0.186 Sum_probs=37.3
Q ss_pred CccEeecCCCCHH----------------------HHHHHHHhcCCC-CCCce-EeecccccCCCCc-----HHHHHHHH
Q 024564 55 PVTICGDIHGQFH----------------------DLAELFQIGGKC-PDTNY-LFMGDYVDRGYYS-----VETVTLLV 105 (266)
Q Consensus 55 ~i~viGDiHG~~~----------------------~l~~ll~~~~~~-~~~~~-vfLGD~vdrG~~s-----~evl~~l~ 105 (266)
.++.++|+||++. .+..++++.... ..+.+ +..||+++..+.+ ..++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 3567888888743 334455554333 33444 4589999876543 23455554
Q ss_pred HHHhhCCCeEEEEccCchhh
Q 024564 106 ALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 106 ~l~~~~p~~v~~lrGNHE~~ 125 (266)
.+. -. .+. ||||..
T Consensus 82 ~~g----~d-a~~-GNHefd 95 (264)
T cd07411 82 ALG----VD-AMV-GHWEFT 95 (264)
T ss_pred hhC----Ce-EEe-cccccc
Confidence 432 22 333 999963
No 99
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=94.26 E-value=0.079 Score=47.15 Aligned_cols=66 Identities=18% Similarity=0.163 Sum_probs=38.1
Q ss_pred CccEeecCCCCH---------------------HHHHHHHHhcCCCCCCceE-eecccccCCCCc-----HHHHHHHHHH
Q 024564 55 PVTICGDIHGQF---------------------HDLAELFQIGGKCPDTNYL-FMGDYVDRGYYS-----VETVTLLVAL 107 (266)
Q Consensus 55 ~i~viGDiHG~~---------------------~~l~~ll~~~~~~~~~~~v-fLGD~vdrG~~s-----~evl~~l~~l 107 (266)
+|+.++|+||++ ..+..+++.........++ -.||+++..+.+ ..+++.+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467889999875 3344455554332333344 489999876532 3344554444
Q ss_pred HhhCCCeEEEEccCchhh
Q 024564 108 KVRYPQRITILRGNHESR 125 (266)
Q Consensus 108 ~~~~p~~v~~lrGNHE~~ 125 (266)
.. .+. ..||||.-
T Consensus 82 g~----D~~-~lGNHefd 94 (281)
T cd07409 82 GY----DAM-TLGNHEFD 94 (281)
T ss_pred CC----CEE-Eecccccc
Confidence 32 244 45999973
No 100
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=94.02 E-value=0.089 Score=43.67 Aligned_cols=43 Identities=28% Similarity=0.361 Sum_probs=27.7
Q ss_pred CCCceEeecccc--cCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhh
Q 024564 80 PDTNYLFMGDYV--DRGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 126 (266)
Q Consensus 80 ~~~~~vfLGD~v--drG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (266)
+.+.++.-||+- =|=++..+=+.++-.| |+.-+++|||||++.
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 345555679983 2334444455555444 677899999999964
No 101
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=93.46 E-value=0.12 Score=46.17 Aligned_cols=73 Identities=23% Similarity=0.279 Sum_probs=42.6
Q ss_pred CccEeecCCCC--HHHHHHHHHhcCCC--CCCceEeecccccCCCCcH--H------HHHHHHHHHhhCCC-eEEEEccC
Q 024564 55 PVTICGDIHGQ--FHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSV--E------TVTLLVALKVRYPQ-RITILRGN 121 (266)
Q Consensus 55 ~i~viGDiHG~--~~~l~~ll~~~~~~--~~~~~vfLGD~vdrG~~s~--e------vl~~l~~l~~~~p~-~v~~lrGN 121 (266)
+..-.|+-.-+ ...+..+++.+... +.+-+|++||+++.+.... + .-.....++..+|. .|+.+.||
T Consensus 39 ~~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 39 PAGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 34556666522 34455566655433 5677889999998776431 1 11222233433333 49999999
Q ss_pred chhhhh
Q 024564 122 HESRQI 127 (266)
Q Consensus 122 HE~~~~ 127 (266)
||..-.
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998643
No 102
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.43 E-value=0.08 Score=56.24 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=42.2
Q ss_pred CCccEeecCCCCH---HHHHHHHHhcCCCCCCceEe-ecccccCCCCc-----HHHHHHHHHHHhhCCCeEEEEccCchh
Q 024564 54 SPVTICGDIHGQF---HDLAELFQIGGKCPDTNYLF-MGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHES 124 (266)
Q Consensus 54 ~~i~viGDiHG~~---~~l~~ll~~~~~~~~~~~vf-LGD~vdrG~~s-----~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (266)
-+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..+++.+..+.. -++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 3689999999985 44444555443333344544 89999876644 245555555431 2568999997
No 103
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=93.35 E-value=0.61 Score=44.28 Aligned_cols=180 Identities=18% Similarity=0.225 Sum_probs=89.1
Q ss_pred CccEeecCCC-CH----HHHHHHHHhcCCC----CCCceE-eecccccC-CC-----------CcHHHHHHHHHHHhhCC
Q 024564 55 PVTICGDIHG-QF----HDLAELFQIGGKC----PDTNYL-FMGDYVDR-GY-----------YSVETVTLLVALKVRYP 112 (266)
Q Consensus 55 ~i~viGDiHG-~~----~~l~~ll~~~~~~----~~~~~v-fLGD~vdr-G~-----------~s~evl~~l~~l~~~~p 112 (266)
.+.+++|+|= .- +.+.+.++-++-+ +..+|+ ..||.||- |- +..+-.+.+.++-..-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 5889999995 22 2333333333222 233555 57999993 22 12333455555555555
Q ss_pred C--eEEEEccCchhhhhhhhhCCHHHHHHHhCChhHHHHHHHHHhhcCcEEEEcC-cEEEEeCCCCCCCCcHHhhhcc-C
Q 024564 113 Q--RITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNF-D 188 (266)
Q Consensus 113 ~--~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHaGi~p~~~~~~~~~~~-~ 188 (266)
. .|++.+||||..-.........+..++. +..-.-.+-.=|....+++ +++..||= +++++... +
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~ksl-----f~~~n~~~v~NP~~~~l~G~~vL~~hG~------sidDii~~vP 375 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIKSL-----FSLNNLLFVSNPALVSLHGVDVLIYHGR------SIDDIIKLVP 375 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhccc-----ccccceEecCCCcEEEECCEEEEEecCC------CHHHHHhhCC
Confidence 5 4778999999965443322222221111 1000001111233333333 68888862 22322211 1
Q ss_pred Cccc-cC------------CCCCccccccCCCCCCCCCCcCCCCCceeeCHHHHHHHHHHCCCceEEEcccCcccceeee
Q 024564 189 RVQE-VP------------HEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWA 255 (266)
Q Consensus 189 r~~~-~~------------~~~~~~dllW~dp~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~~ 255 (266)
+... -+ .-..+.+-+|.-|.....+ +.++ --++++.||++. .|+...
T Consensus 376 ~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~kD~l--------------VIee-----vPDv~~~Ghvh~-~g~~~y 435 (481)
T COG1311 376 GADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETKDYL--------------VIEE-----VPDVFHTGHVHK-FGTGVY 435 (481)
T ss_pred CCCccchHHHHHHHHHhcccCCCCCCccccccCCcCce--------------eecc-----CCcEEEEccccc-cceeEE
Confidence 1000 00 0112345566655432211 1111 235788999987 899998
Q ss_pred cCCeeeeeec
Q 024564 256 HVIFDFQILT 265 (266)
Q Consensus 256 ~~~~~~~~~t 265 (266)
-+++.+++.|
T Consensus 436 ~gv~~vns~T 445 (481)
T COG1311 436 EGVNLVNSGT 445 (481)
T ss_pred eccceEEeee
Confidence 8888888776
No 104
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=93.15 E-value=0.14 Score=44.98 Aligned_cols=64 Identities=30% Similarity=0.246 Sum_probs=39.9
Q ss_pred ccEeecCC----------CCHHHHHHHHHhcCCCCCC-ceEeecccccCCCCc-----HHHHHHHHHHHhhCCCeEEEEc
Q 024564 56 VTICGDIH----------GQFHDLAELFQIGGKCPDT-NYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILR 119 (266)
Q Consensus 56 i~viGDiH----------G~~~~l~~ll~~~~~~~~~-~~vfLGD~vdrG~~s-----~evl~~l~~l~~~~p~~v~~lr 119 (266)
|.-+.|+| |-+..+..++++......+ -++..||+++..+.+ ..+++.+..+.. -+...
T Consensus 3 il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~~ 77 (257)
T cd07406 3 ILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLACF 77 (257)
T ss_pred EEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEee
Confidence 45566666 3466677777765443334 444589999876532 456666655531 25578
Q ss_pred cCchh
Q 024564 120 GNHES 124 (266)
Q Consensus 120 GNHE~ 124 (266)
||||.
T Consensus 78 GNHef 82 (257)
T cd07406 78 GNHEF 82 (257)
T ss_pred ccccc
Confidence 99996
No 105
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.87 E-value=0.18 Score=47.15 Aligned_cols=47 Identities=21% Similarity=0.381 Sum_probs=34.0
Q ss_pred CCCceEeecccccCCCCc--HHHHHHHHHHHhhCCC----eEEEEccCchhhh
Q 024564 80 PDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQ----RITILRGNHESRQ 126 (266)
Q Consensus 80 ~~~~~vfLGD~vdrG~~s--~evl~~l~~l~~~~p~----~v~~lrGNHE~~~ 126 (266)
..+-++||||++|.|..+ -|--+...+++..++. .+..+.||||-=.
T Consensus 93 kPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIGf 145 (410)
T KOG3662|consen 93 KPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIGF 145 (410)
T ss_pred CCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccccc
Confidence 356677899999988764 4455556666665554 5889999999843
No 106
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=92.46 E-value=0.37 Score=44.13 Aligned_cols=73 Identities=19% Similarity=0.325 Sum_probs=47.0
Q ss_pred CCccEeecCCCCHHHHHHHH---HhcCCCCCCceEeeccccc-CCC---CcHHH---HHHHH------HHHhhCCCeEEE
Q 024564 54 SPVTICGDIHGQFHDLAELF---QIGGKCPDTNYLFMGDYVD-RGY---YSVET---VTLLV------ALKVRYPQRITI 117 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll---~~~~~~~~~~~vfLGD~vd-rG~---~s~ev---l~~l~------~l~~~~p~~v~~ 117 (266)
+||.|-|=-||.++.+-+-+ ++.|-.+.+.++++||+=. |.. +++.| ...+. +-...+|--.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 47889999999999988544 4555557788889999842 211 22222 11111 112346655678
Q ss_pred EccCchhhh
Q 024564 118 LRGNHESRQ 126 (266)
Q Consensus 118 lrGNHE~~~ 126 (266)
|-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999964
No 107
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=92.03 E-value=0.26 Score=43.65 Aligned_cols=67 Identities=15% Similarity=0.113 Sum_probs=47.7
Q ss_pred CCccEeecCCCC--HHHHHHHHHhcCCCCC-CceEeecccccCC-CCcHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 54 SPVTICGDIHGQ--FHDLAELFQIGGKCPD-TNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 54 ~~i~viGDiHG~--~~~l~~ll~~~~~~~~-~~~vfLGD~vdrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
++|.++|||=|. ...+...|..+..... +-+|..||...-| .-+.++.+.|..+... ++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvD----viT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVN----YITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCC----EEEc-cchhcc
Confidence 478999999999 5566677776654433 4444579998765 4578888888877543 5555 999984
No 108
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=92.03 E-value=0.33 Score=44.21 Aligned_cols=70 Identities=21% Similarity=0.254 Sum_probs=40.9
Q ss_pred CccEeecCCCCHH-----------------HHH--HHHH-hcCCCCCCceEeecccccCCCCcHHHHHHH---HHHHhhC
Q 024564 55 PVTICGDIHGQFH-----------------DLA--ELFQ-IGGKCPDTNYLFMGDYVDRGYYSVETVTLL---VALKVRY 111 (266)
Q Consensus 55 ~i~viGDiHG~~~-----------------~l~--~ll~-~~~~~~~~~~vfLGD~vdrG~~s~evl~~l---~~l~~~~ 111 (266)
+|+.+.|+|=... ++. +.++ .+.....+.+||+||.|+. .........+ .+-.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 7999999995444 111 1222 2233456788999999984 4444433333 2222222
Q ss_pred CCeEEEEccCchhh
Q 024564 112 PQRITILRGNHESR 125 (266)
Q Consensus 112 p~~v~~lrGNHE~~ 125 (266)
.=-...+.||||..
T Consensus 134 ~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDE 147 (379)
T ss_pred CCCeEEEecccccc
Confidence 22256899999995
No 109
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=91.83 E-value=0.16 Score=45.27 Aligned_cols=66 Identities=20% Similarity=0.062 Sum_probs=36.4
Q ss_pred CccEeecCCCCHHH----------HHHHHHhcCCC----CCCceE-eecccccCCCCc-----HHHHHHHHHHHhhCCCe
Q 024564 55 PVTICGDIHGQFHD----------LAELFQIGGKC----PDTNYL-FMGDYVDRGYYS-----VETVTLLVALKVRYPQR 114 (266)
Q Consensus 55 ~i~viGDiHG~~~~----------l~~ll~~~~~~----~~~~~v-fLGD~vdrG~~s-----~evl~~l~~l~~~~p~~ 114 (266)
.|+.++|+||++.. +..++++.... ....++ -.||.+.-.+.+ ..+++.+..+...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 46789999998633 33444433211 223333 489998433322 3345555555422
Q ss_pred EEEEccCchhh
Q 024564 115 ITILRGNHESR 125 (266)
Q Consensus 115 v~~lrGNHE~~ 125 (266)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 44 44999963
No 110
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=89.95 E-value=0.32 Score=47.07 Aligned_cols=69 Identities=29% Similarity=0.327 Sum_probs=44.5
Q ss_pred CCCccEeecCCCCHH------------HHHH---HHHhcCCCCCCceEe-ecccccCCC------CcHHHHHHHHHHHhh
Q 024564 53 KSPVTICGDIHGQFH------------DLAE---LFQIGGKCPDTNYLF-MGDYVDRGY------YSVETVTLLVALKVR 110 (266)
Q Consensus 53 ~~~i~viGDiHG~~~------------~l~~---ll~~~~~~~~~~~vf-LGD~vdrG~------~s~evl~~l~~l~~~ 110 (266)
+-+|+-+.|+||++. .+.+ ++++........+++ .||+++..+ .....++.+..++-.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~yD 105 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGYD 105 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCCc
Confidence 447899999999998 3333 333332222334444 899998733 334567777777533
Q ss_pred CCCeEEEEccCchhhh
Q 024564 111 YPQRITILRGNHESRQ 126 (266)
Q Consensus 111 ~p~~v~~lrGNHE~~~ 126 (266)
..-.||||.-.
T Consensus 106 -----a~tiGNHEFd~ 116 (517)
T COG0737 106 -----AMTLGNHEFDY 116 (517)
T ss_pred -----EEeeccccccc
Confidence 57789999953
No 111
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=89.75 E-value=0.42 Score=43.30 Aligned_cols=65 Identities=25% Similarity=0.248 Sum_probs=39.5
Q ss_pred CccEeecCCCCHH------HHHHHHHhcCC-----CCCCceEeecccccCCCC-------------cHHHHHHHHHHHhh
Q 024564 55 PVTICGDIHGQFH------DLAELFQIGGK-----CPDTNYLFMGDYVDRGYY-------------SVETVTLLVALKVR 110 (266)
Q Consensus 55 ~i~viGDiHG~~~------~l~~ll~~~~~-----~~~~~~vfLGD~vdrG~~-------------s~evl~~l~~l~~~ 110 (266)
.|+-+.|+||++. .+..+++.... .++.-++..||.+.-++. ...+++++..+...
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D 81 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ 81 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc
Confidence 3677899999964 33334443321 223334458999875443 34556666666533
Q ss_pred CCCeEEEEccCchh
Q 024564 111 YPQRITILRGNHES 124 (266)
Q Consensus 111 ~p~~v~~lrGNHE~ 124 (266)
.+..||||.
T Consensus 82 -----a~tlGNHEF 90 (313)
T cd08162 82 -----AIALGNHEF 90 (313)
T ss_pred -----EEecccccc
Confidence 577899996
No 112
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=89.48 E-value=0.69 Score=40.71 Aligned_cols=66 Identities=20% Similarity=0.241 Sum_probs=44.1
Q ss_pred CccEeecCCCCHHH--HHHHHHhcCCCCCCceE-eecccccCC-CCcHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 55 PVTICGDIHGQFHD--LAELFQIGGKCPDTNYL-FMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 55 ~i~viGDiHG~~~~--l~~ll~~~~~~~~~~~v-fLGD~vdrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
||.+||||=|.... +...|..+......+++ ..||..--| .-+.++.+.|..+... +..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 57899999998654 45555555333233344 479988666 4677888888877643 4444 999863
No 113
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=88.84 E-value=0.41 Score=42.75 Aligned_cols=66 Identities=18% Similarity=0.104 Sum_probs=37.9
Q ss_pred CccEeecCCCCHHH-------------HHHHHHhc----CCCCCCce-EeecccccCCCCc-------HHHHHHHHHHHh
Q 024564 55 PVTICGDIHGQFHD-------------LAELFQIG----GKCPDTNY-LFMGDYVDRGYYS-------VETVTLLVALKV 109 (266)
Q Consensus 55 ~i~viGDiHG~~~~-------------l~~ll~~~----~~~~~~~~-vfLGD~vdrG~~s-------~evl~~l~~l~~ 109 (266)
+|+-+.|+||++.. +.++.+.+ .......+ +-.||.+..-+.+ ..+++++..+..
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mgy 86 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMPY 86 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcCC
Confidence 68889999998641 22322221 11122233 4489999764433 224555555542
Q ss_pred hCCCeEEEEccCchhh
Q 024564 110 RYPQRITILRGNHESR 125 (266)
Q Consensus 110 ~~p~~v~~lrGNHE~~ 125 (266)
=.+..||||.-
T Consensus 87 -----Da~tlGNHEFd 97 (282)
T cd07407 87 -----DLLTIGNHELY 97 (282)
T ss_pred -----cEEeecccccC
Confidence 36788999994
No 114
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=88.08 E-value=0.77 Score=38.66 Aligned_cols=72 Identities=11% Similarity=0.189 Sum_probs=39.2
Q ss_pred ccEeecCCCC-----HHHHHHHHHhcC-CCCCCceEeecccccCCCCcH----------HHHHHHHHHHh---hC--CCe
Q 024564 56 VTICGDIHGQ-----FHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSV----------ETVTLLVALKV---RY--PQR 114 (266)
Q Consensus 56 i~viGDiHG~-----~~~l~~ll~~~~-~~~~~~~vfLGD~vdrG~~s~----------evl~~l~~l~~---~~--p~~ 114 (266)
|++++|+|=. ++.|.++|+.+. ....+.+|++|+++|.-.... .....+..+.. .. --+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4677777755 666777887776 555678999999999522111 11112222211 11 137
Q ss_pred EEEEccCchhhhh
Q 024564 115 ITILRGNHESRQI 127 (266)
Q Consensus 115 v~~lrGNHE~~~~ 127 (266)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998654
No 115
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=87.62 E-value=0.58 Score=46.50 Aligned_cols=66 Identities=20% Similarity=0.146 Sum_probs=39.8
Q ss_pred CCccEeecCCCCHHH----------------HHHHHHhcCCC-CCCceEeecccccCCCCc-------------HHHHHH
Q 024564 54 SPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYYS-------------VETVTL 103 (266)
Q Consensus 54 ~~i~viGDiHG~~~~----------------l~~ll~~~~~~-~~~~~vfLGD~vdrG~~s-------------~evl~~ 103 (266)
-+|+-..|+||++.. +..++++.... ++.-+|-.||.+...|.+ ..+++.
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 367889999999753 33344443222 233344489999855433 235555
Q ss_pred HHHHHhhCCCeEEEEccCchh
Q 024564 104 LVALKVRYPQRITILRGNHES 124 (266)
Q Consensus 104 l~~l~~~~p~~v~~lrGNHE~ 124 (266)
+..+.. =....||||.
T Consensus 83 mN~lgy-----Da~tlGNHEF 98 (626)
T TIGR01390 83 MNLLKY-----DVGNLGNHEF 98 (626)
T ss_pred HhhcCc-----cEEecccccc
Confidence 555542 2577899996
No 116
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=87.49 E-value=0.64 Score=46.40 Aligned_cols=68 Identities=19% Similarity=0.161 Sum_probs=42.3
Q ss_pred cCCCccEeecCCCCHHH----------------HHHHHHhcCCC-CCCceEeecccccCCCCcH-------------HHH
Q 024564 52 VKSPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYYSV-------------ETV 101 (266)
Q Consensus 52 ~~~~i~viGDiHG~~~~----------------l~~ll~~~~~~-~~~~~vfLGD~vdrG~~s~-------------evl 101 (266)
..-+|+...|+||++.. +..++++.... ++.-+|-.||.+...|.+- .++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45589999999999743 33344443222 2333445899997655431 256
Q ss_pred HHHHHHHhhCCCeEEEEccCchh
Q 024564 102 TLLVALKVRYPQRITILRGNHES 124 (266)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~ 124 (266)
+.+..+.. =....||||.
T Consensus 104 ~amN~lgy-----Da~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLDY-----DVGNLGNHEF 121 (649)
T ss_pred HHHHhcCC-----cEEeccchhh
Confidence 66666642 3678899996
No 117
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=87.04 E-value=0.63 Score=49.61 Aligned_cols=67 Identities=25% Similarity=0.293 Sum_probs=40.6
Q ss_pred CCCccEeecCCCCHHH----------------HHHHHHhcCCCCCCceEe-ecccccCCCC--------------cHHHH
Q 024564 53 KSPVTICGDIHGQFHD----------------LAELFQIGGKCPDTNYLF-MGDYVDRGYY--------------SVETV 101 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~----------------l~~ll~~~~~~~~~~~vf-LGD~vdrG~~--------------s~evl 101 (266)
.-+|+.++|+||++.. +..+++.........+++ .||.+...|- ...++
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i 120 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMI 120 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHH
Confidence 3479999999998643 333444433222344555 8999986551 12355
Q ss_pred HHHHHHHhhCCCeEEEEccCchh
Q 024564 102 TLLVALKVRYPQRITILRGNHES 124 (266)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~ 124 (266)
..+..+.. =....||||.
T Consensus 121 ~~mN~lgy-----Da~~lGNHEF 138 (1163)
T PRK09419 121 KAMNALGY-----DAGTLGNHEF 138 (1163)
T ss_pred HHHhhcCc-----cEEeeccccc
Confidence 55555542 2566999997
No 118
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=87.03 E-value=0.37 Score=45.48 Aligned_cols=42 Identities=26% Similarity=0.427 Sum_probs=34.2
Q ss_pred CCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhh
Q 024564 81 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 127 (266)
Q Consensus 81 ~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 127 (266)
.+++-++||+.||||.+-.+++.|...- .+=+-.||||...+
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 4567789999999999999999987662 46678999998644
No 119
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.12 E-value=1.5 Score=41.40 Aligned_cols=69 Identities=22% Similarity=0.380 Sum_probs=51.9
Q ss_pred CCCccEeecCCCCHHHHHHHHHhcCCC--CCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCc
Q 024564 53 KSPVTICGDIHGQFHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNH 122 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~--~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNH 122 (266)
+.+|.|+||.-|+++.|.+-.+.+... |-+-++++|++++.-..+.|++.+....+ ..|--+|++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 468999999999999998877766543 34678889999987677888887765543 3455577776665
No 120
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=83.64 E-value=1.3 Score=45.23 Aligned_cols=67 Identities=22% Similarity=0.183 Sum_probs=40.4
Q ss_pred CCCccEeecCCCCHHHH----------------HHHHHhcCCC-CCCceEeecccccCCCCc--------------HHHH
Q 024564 53 KSPVTICGDIHGQFHDL----------------AELFQIGGKC-PDTNYLFMGDYVDRGYYS--------------VETV 101 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~l----------------~~ll~~~~~~-~~~~~vfLGD~vdrG~~s--------------~evl 101 (266)
.-+|+-+.|+||++... ..+++..... ++.-+|-.||.+..-|.+ ..++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 34789999999996432 2234433222 233344589999754432 1256
Q ss_pred HHHHHHHhhCCCeEEEEccCchh
Q 024564 102 TLLVALKVRYPQRITILRGNHES 124 (266)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~ 124 (266)
+.+..|.. =..-.||||.
T Consensus 195 ~amN~LGy-----DA~tLGNHEF 212 (814)
T PRK11907 195 AALEALGF-----DAGTLGNHEF 212 (814)
T ss_pred HHHhccCC-----CEEEechhhc
Confidence 66666642 2578899997
No 121
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=83.63 E-value=17 Score=30.44 Aligned_cols=85 Identities=19% Similarity=0.275 Sum_probs=61.5
Q ss_pred CceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhhhhhhhhCCHH----------------HHHHHhCChh
Q 024564 82 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYD----------------ECLRKYGNAN 145 (266)
Q Consensus 82 ~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~----------------e~~~~~~~~~ 145 (266)
..+||+| .|-+..|++.++..++..|.++.++ .|+-|.|..++...|.. |.-.+| -..
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 4577887 5888999999999999998776555 89999998776555431 222222 134
Q ss_pred HHHHHHHHHhhcCcEEEEcCcEEEEeC
Q 024564 146 IWKIFTDLFDYFPLTALVESEIFCLHG 172 (266)
Q Consensus 146 ~~~~~~~~~~~lP~~~~i~~~~l~vHa 172 (266)
.|..+...+-++++...+-.+++.+-|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 566677777888888887778888876
No 122
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=83.15 E-value=1.8 Score=40.57 Aligned_cols=71 Identities=10% Similarity=0.031 Sum_probs=41.2
Q ss_pred CCCccEeecCC-CCHHHHH--HHHHhcCC-CCCCceEeecccccCCCCcHH------HHHHHHHHH---hhCCCeEEEEc
Q 024564 53 KSPVTICGDIH-GQFHDLA--ELFQIGGK-CPDTNYLFMGDYVDRGYYSVE------TVTLLVALK---VRYPQRITILR 119 (266)
Q Consensus 53 ~~~i~viGDiH-G~~~~l~--~ll~~~~~-~~~~~~vfLGD~vdrG~~s~e------vl~~l~~l~---~~~p~~v~~lr 119 (266)
+-+++++||-= |.+.... +.|..... .+.+-+|-+||-++.|..++. ..+.+..-. ..- ..++++
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~--Pwy~vL 103 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQI--PFFTVL 103 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCC--CeEEeC
Confidence 34799999954 3333221 23333322 334556669998888877543 344444222 112 389999
Q ss_pred cCchhh
Q 024564 120 GNHESR 125 (266)
Q Consensus 120 GNHE~~ 125 (266)
||||..
T Consensus 104 GNHDy~ 109 (394)
T PTZ00422 104 GQADWD 109 (394)
T ss_pred Cccccc
Confidence 999973
No 123
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=82.48 E-value=1.9 Score=42.17 Aligned_cols=65 Identities=20% Similarity=0.159 Sum_probs=37.4
Q ss_pred ccEeecCCCCHHH---------------------HHHHHHhcCC-CCCCceEeecccccCCCCc-----HHHHHHHHHHH
Q 024564 56 VTICGDIHGQFHD---------------------LAELFQIGGK-CPDTNYLFMGDYVDRGYYS-----VETVTLLVALK 108 (266)
Q Consensus 56 i~viGDiHG~~~~---------------------l~~ll~~~~~-~~~~~~vfLGD~vdrG~~s-----~evl~~l~~l~ 108 (266)
|+-+.|+||++.. +..++++... .++.-++..||.+...+.+ ...++.+..+.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5667888887543 3333443322 2334445589998755433 33455555554
Q ss_pred hhCCCeEEEEccCchhh
Q 024564 109 VRYPQRITILRGNHESR 125 (266)
Q Consensus 109 ~~~p~~v~~lrGNHE~~ 125 (266)
. -....||||.-
T Consensus 83 ~-----Da~~lGNHEFd 94 (550)
T TIGR01530 83 F-----DFFTLGNHEFD 94 (550)
T ss_pred C-----CEEEecccccc
Confidence 2 36788999973
No 124
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=81.85 E-value=1.2 Score=43.52 Aligned_cols=68 Identities=22% Similarity=0.115 Sum_probs=37.8
Q ss_pred CCCccEeecCCCCHHH-------H---HHHHHhcC-----CCCCCceEeecccccCCCCc-----HHHHHHHHHHHhhCC
Q 024564 53 KSPVTICGDIHGQFHD-------L---AELFQIGG-----KCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYP 112 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~-------l---~~ll~~~~-----~~~~~~~vfLGD~vdrG~~s-----~evl~~l~~l~~~~p 112 (266)
+-.|+.+.|+||++.. + ..+++... ..++.-++..||.+.-.+.+ ..+++.+..+..
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~--- 110 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGY--- 110 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCC---
Confidence 3468999999998751 2 23333321 12233344589998643322 234555555542
Q ss_pred CeEEEEccCchhh
Q 024564 113 QRITILRGNHESR 125 (266)
Q Consensus 113 ~~v~~lrGNHE~~ 125 (266)
.+.. .||||.-
T Consensus 111 -Da~t-lGNHEFD 121 (551)
T PRK09558 111 -DAMA-VGNHEFD 121 (551)
T ss_pred -CEEc-ccccccC
Confidence 2444 5999973
No 125
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=80.84 E-value=2.5 Score=37.47 Aligned_cols=66 Identities=20% Similarity=0.253 Sum_probs=40.9
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCC-eEEEEccCchhhhh
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ-RITILRGNHESRQI 127 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~-~v~~lrGNHE~~~~ 127 (266)
.+.+.|+|.|....+.. ..++.+-++-+||+-.-|- +-||..+=..+-. .|. +=++|+||||..+-
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gs-lph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGS-LPHEYKIVIAGNHELTFD 128 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhcc-CcceeeEEEeeccceeec
Confidence 47999999997665443 2344455677999976443 4555544332221 121 34789999998643
No 126
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=80.58 E-value=4.9 Score=35.98 Aligned_cols=74 Identities=15% Similarity=0.301 Sum_probs=47.9
Q ss_pred CCCccEeecCCCC----HHHHHHHHHhcC-CCC----CCceEeecccccCC----CCc----HHHHHHHHHH-HhhCC--
Q 024564 53 KSPVTICGDIHGQ----FHDLAELFQIGG-KCP----DTNYLFMGDYVDRG----YYS----VETVTLLVAL-KVRYP-- 112 (266)
Q Consensus 53 ~~~i~viGDiHG~----~~~l~~ll~~~~-~~~----~~~~vfLGD~vdrG----~~s----~evl~~l~~l-~~~~p-- 112 (266)
..+++++||+|=+ +++|.++|+... ..+ ...+|++|+++.+. ..+ .+-.+-|..+ ...+|
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L 106 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLI 106 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHH
Confidence 3579999999965 667777777662 212 45688999998663 222 2334444432 33444
Q ss_pred ---CeEEEEccCchhhh
Q 024564 113 ---QRITILRGNHESRQ 126 (266)
Q Consensus 113 ---~~v~~lrGNHE~~~ 126 (266)
.++++|.|-.|-..
T Consensus 107 ~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 107 LEHCYLIFIPGINDPCA 123 (291)
T ss_pred HhcCeEEEECCCCCCCc
Confidence 48999999999753
No 127
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=78.23 E-value=2.3 Score=40.33 Aligned_cols=33 Identities=9% Similarity=-0.139 Sum_probs=26.0
Q ss_pred HHHHHHHHCCCceEEEcccCcccceeeecCCee
Q 024564 228 ISEQFNHTNNLKLIARAHQLVMDGFNWAHVIFD 260 (266)
Q Consensus 228 ~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~ 260 (266)
.++..+-++++++.+=||...=+.+..-++..+
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 588899999999999999987666655555544
No 128
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=77.35 E-value=6.1 Score=38.30 Aligned_cols=56 Identities=20% Similarity=0.205 Sum_probs=42.2
Q ss_pred CCCccEeecCCC------------CHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHH
Q 024564 53 KSPVTICGDIHG------------QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALK 108 (266)
Q Consensus 53 ~~~i~viGDiHG------------~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~ 108 (266)
..||.|-.|+|= .|..|+.+|+.+.....+.++.-||++.--.-|.++|-....+-
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~lL 80 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLELL 80 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHHH
Confidence 458999999994 36778888888776666777778999987777877766555443
No 129
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=76.65 E-value=2.8 Score=42.78 Aligned_cols=67 Identities=21% Similarity=0.178 Sum_probs=39.4
Q ss_pred CCCccEeecCCCCHHH----------------HHHHHHhcCCC-CCCceEeecccccCCCCc------------------
Q 024564 53 KSPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYYS------------------ 97 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~----------------l~~ll~~~~~~-~~~~~vfLGD~vdrG~~s------------------ 97 (266)
.-+|+...|+||++.. +..++++.... ++.-+|-.||.+.--|.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4579999999999632 22334433211 233344589988533321
Q ss_pred -HHHHHHHHHHHhhCCCeEEEEccCchh
Q 024564 98 -VETVTLLVALKVRYPQRITILRGNHES 124 (266)
Q Consensus 98 -~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (266)
..+++.+..+... ....||||.
T Consensus 119 ~~p~i~~mN~lgyD-----a~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKYD-----VISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCCC-----EEecccccc
Confidence 2355666555422 577899996
No 130
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=74.54 E-value=7.3 Score=34.36 Aligned_cols=15 Identities=7% Similarity=0.375 Sum_probs=12.2
Q ss_pred eEEEEccCchhhhhh
Q 024564 114 RITILRGNHESRQIT 128 (266)
Q Consensus 114 ~v~~lrGNHE~~~~~ 128 (266)
.|.++.||||.....
T Consensus 96 ~V~imPG~~Dp~~~~ 110 (257)
T cd07387 96 PVDLMPGEFDPANHS 110 (257)
T ss_pred eEEECCCCCCccccc
Confidence 488999999997554
No 131
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=67.85 E-value=2.8 Score=37.22 Aligned_cols=69 Identities=25% Similarity=0.295 Sum_probs=41.9
Q ss_pred CCCccEeecC--CCCHHHHHHHHHh--cCC-CCCCceEeeccc-ccCCCCcHH------HHHHHH---HHHhhCCCeEEE
Q 024564 53 KSPVTICGDI--HGQFHDLAELFQI--GGK-CPDTNYLFMGDY-VDRGYYSVE------TVTLLV---ALKVRYPQRITI 117 (266)
Q Consensus 53 ~~~i~viGDi--HG~~~~l~~ll~~--~~~-~~~~~~vfLGD~-vdrG~~s~e------vl~~l~---~l~~~~p~~v~~ 117 (266)
+-++.||||- +|.+..-+-.++. +|. -+-+-+|-+||- -|-|..+.. -.+-+. +|+ . ..+.
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ--k--pWy~ 118 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ--K--PWYS 118 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc--c--chhh
Confidence 4479999994 7888776665553 222 223445669994 466765521 222222 222 2 3689
Q ss_pred EccCchhh
Q 024564 118 LRGNHESR 125 (266)
Q Consensus 118 lrGNHE~~ 125 (266)
+.||||.+
T Consensus 119 vlGNHDyr 126 (336)
T KOG2679|consen 119 VLGNHDYR 126 (336)
T ss_pred hccCcccc
Confidence 99999995
No 132
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=67.26 E-value=4.9 Score=39.62 Aligned_cols=39 Identities=18% Similarity=0.086 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHCCCc----eEEEcccCcc--ccee-eecCCeeeee
Q 024564 225 GQDISEQFNHTNNLK----LIARAHQLVM--DGFN-WAHVIFDFQI 263 (266)
Q Consensus 225 G~~~~~~fl~~~~~~----~iirgH~~~~--~G~~-~~~~~~~~~~ 263 (266)
..+.....|+..|++ .||-||+||. +|=. ...+||.+-|
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VI 552 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVI 552 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEE
Confidence 567788899999998 9999999997 3322 2345555544
No 133
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=52.40 E-value=1.4e+02 Score=24.87 Aligned_cols=76 Identities=22% Similarity=0.260 Sum_probs=54.7
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhcCCC--------------------------
Q 024564 26 PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKC-------------------------- 79 (266)
Q Consensus 26 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~-------------------------- 79 (266)
.++++++.+-+.++.+.+.++-.- ...++||=++|++-=+-.++..+..+
T Consensus 11 Lisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kD 86 (178)
T COG0634 11 LISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKD 86 (178)
T ss_pred eeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecc
Confidence 478999999888888877666443 46789999999987776666654432
Q ss_pred -----CCCceEeecccccCCCCcHHHHHHHH
Q 024564 80 -----PDTNYLFMGDYVDRGYYSVETVTLLV 105 (266)
Q Consensus 80 -----~~~~~vfLGD~vdrG~~s~evl~~l~ 105 (266)
...+++++=|++|-|---..+.++|.
T Consensus 87 ld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 87 LDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred cccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 13558889999998865555555554
No 134
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=51.98 E-value=17 Score=31.90 Aligned_cols=40 Identities=30% Similarity=0.351 Sum_probs=27.5
Q ss_pred ceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 83 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 83 ~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
+++|+||++.+. .-..+...|.+++.+++..+++. |-|..
T Consensus 1 ~ilfigdi~g~~-G~~~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKP-GRKAVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHH-HHHHHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 478999999863 33456777888888877655444 55553
No 135
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=49.35 E-value=46 Score=23.69 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=44.9
Q ss_pred CCccEeecCCCCHHHHHHHHHhcCC--CCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEccC
Q 024564 54 SPVTICGDIHGQFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGN 121 (266)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~--~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrGN 121 (266)
..+.+|=|---+.+.+..+++.+.. +....++++|+.-|.|..+.+....+..+...+...+++...|
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 3567788866678888888776532 3445566799999988888887777777766666665444444
No 136
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=46.97 E-value=1.2e+02 Score=24.58 Aligned_cols=58 Identities=21% Similarity=0.392 Sum_probs=40.3
Q ss_pred cEeecCCCCHHHHHHHHH-hcCC------------CCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEE
Q 024564 57 TICGDIHGQFHDLAELFQ-IGGK------------CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITI 117 (266)
Q Consensus 57 ~viGDiHG~~~~l~~ll~-~~~~------------~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~ 117 (266)
++.+-..||-..+.+.+. .++. .+.-++||+|=.+|+|.-+-++.++|.+++ +++|.+
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~l 72 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVAL 72 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEE
Confidence 455566777766655443 2222 234679999999999999999999998875 345544
No 137
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.34 E-value=74 Score=24.77 Aligned_cols=60 Identities=17% Similarity=0.189 Sum_probs=40.0
Q ss_pred HHHHHHHHHhcCCCCCCceEeecccccCCCCc-----HHHHHHHHHHHhhCCCeEEEE---ccCchhh
Q 024564 66 FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITIL---RGNHESR 125 (266)
Q Consensus 66 ~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s-----~evl~~l~~l~~~~p~~v~~l---rGNHE~~ 125 (266)
+++|++.++..+.....-++|+|+-.|++-+| +...-.+.+--..+|..+++| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 67888888888776666677899998886544 444444443333577766554 6887664
No 138
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=46.26 E-value=24 Score=30.75 Aligned_cols=88 Identities=24% Similarity=0.315 Sum_probs=47.0
Q ss_pred CCceEeecccc-cCCCC---cHHHHHHHHHHHh-------hCCCeEEEEccCchhhhhhhhhCCHHHHHH--HhCChhHH
Q 024564 81 DTNYLFMGDYV-DRGYY---SVETVTLLVALKV-------RYPQRITILRGNHESRQITQVYGFYDECLR--KYGNANIW 147 (266)
Q Consensus 81 ~~~~vfLGD~v-drG~~---s~evl~~l~~l~~-------~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~--~~~~~~~~ 147 (266)
.+.-+||||-. ||-.. ..-+|.+|.++.. +-.++|++|-||||.-.-. .| ...+. +....+.
T Consensus 85 itpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~ng-ny---~arlanhkls~gDT- 159 (318)
T PF13258_consen 85 ITPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNG-NY---MARLANHKLSAGDT- 159 (318)
T ss_pred cccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceeccCc-hH---HHHHhhCCCCccch-
Confidence 45578888864 44221 1235555555543 1235899999999985321 11 11111 1111122
Q ss_pred HHHHHHHhhcCcEEEEc-CcEEEEeCCCCC
Q 024564 148 KIFTDLFDYFPLTALVE-SEIFCLHGGLSP 176 (266)
Q Consensus 148 ~~~~~~~~~lP~~~~i~-~~~l~vHaGi~p 176 (266)
-..+..+|++..-. .+++-.|-||-.
T Consensus 160 ---YnlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 160 ---YNLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred ---hhccccccccccCcchhhhhcccCcee
Confidence 23467778765422 368888888854
No 139
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=45.02 E-value=17 Score=32.22 Aligned_cols=39 Identities=26% Similarity=0.445 Sum_probs=25.7
Q ss_pred ceEeecccccCCCCcHH-HHHHHHHHHhhCCCeEEEEccCchhh
Q 024564 83 NYLFMGDYVDRGYYSVE-TVTLLVALKVRYPQRITILRGNHESR 125 (266)
Q Consensus 83 ~~vfLGD~vdrG~~s~e-vl~~l~~l~~~~p~~v~~lrGNHE~~ 125 (266)
+++|+||++.+ ...+ +-..|-+++.+++..+ +-.|-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~--vIaNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADL--VIANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCE--EEEcCccc
Confidence 58999999964 2333 3466778888877554 44466664
No 140
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=43.16 E-value=34 Score=29.99 Aligned_cols=32 Identities=6% Similarity=0.002 Sum_probs=17.0
Q ss_pred HHHHHHHHHHCCCceEEEcccCcccceeeecC
Q 024564 226 QDISEQFNHTNNLKLIARAHQLVMDGFNWAHV 257 (266)
Q Consensus 226 ~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~ 257 (266)
..++++||.....+.=+-.-..+-.|.-+..+
T Consensus 212 e~~i~rFl~~~p~rfeva~g~~~l~GV~ieid 243 (266)
T COG1692 212 EEPIKRFLTGLPQRFEVASGPAQLNGVLIEID 243 (266)
T ss_pred hHHHHHHHhCCCceeEecCCCcEEEEEEEEec
Confidence 56788888877754444332222244443333
No 141
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=40.86 E-value=83 Score=29.82 Aligned_cols=66 Identities=12% Similarity=0.108 Sum_probs=47.2
Q ss_pred CCccEeecCCC-CHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhC-CCeEEEEcc
Q 024564 54 SPVTICGDIHG-QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-PQRITILRG 120 (266)
Q Consensus 54 ~~i~viGDiHG-~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~-p~~v~~lrG 120 (266)
..+.+|=|-++ +.+.+.++|+.+...+..+++.+||+...|+.+.+.-..+.+.-... .+.++++ |
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 45788999655 58888888876654344568889999999999998877776554433 3455544 6
No 142
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=39.53 E-value=69 Score=31.55 Aligned_cols=61 Identities=20% Similarity=0.200 Sum_probs=36.0
Q ss_pred HHHHHHHhcCCCC--CCceEeecccc--cCCCCcHH----HHHHHHHHH-hhCCC-eEEEEccCchhhhhh
Q 024564 68 DLAELFQIGGKCP--DTNYLFMGDYV--DRGYYSVE----TVTLLVALK-VRYPQ-RITILRGNHESRQIT 128 (266)
Q Consensus 68 ~l~~ll~~~~~~~--~~~~vfLGD~v--drG~~s~e----vl~~l~~l~-~~~p~-~v~~lrGNHE~~~~~ 128 (266)
.+..+|+.++... -+-++..||++ |+++.+.+ ++..+.++. .-+|+ -|+...||||-.-.+
T Consensus 196 lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N 266 (577)
T KOG3770|consen 196 LIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVN 266 (577)
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHh
Confidence 3455566554332 24455699998 45665544 333333332 33565 588999999997554
No 143
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.51 E-value=70 Score=29.30 Aligned_cols=59 Identities=27% Similarity=0.446 Sum_probs=39.0
Q ss_pred HhhCCCccccCCCccEeecCC-CCHHHHHHHHHhcCCCCCCceEe-eccccc--CCCCcHHHHHHHHHHHh
Q 024564 43 LMEESNVQPVKSPVTICGDIH-GQFHDLAELFQIGGKCPDTNYLF-MGDYVD--RGYYSVETVTLLVALKV 109 (266)
Q Consensus 43 l~~~~~~~~~~~~i~viGDiH-G~~~~l~~ll~~~~~~~~~~~vf-LGD~vd--rG~~s~evl~~l~~l~~ 109 (266)
+++.|..++....+.++||.| |||.++.. .+..++| +-|+=. -|+....++.+..+|..
T Consensus 46 ~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 46 MKTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HhcCccccCCCCceEEecccccccchhhcc--------CCCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 455566777888999999999 77766643 1333445 666521 26677777777777753
No 144
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=34.50 E-value=20 Score=34.26 Aligned_cols=23 Identities=17% Similarity=0.492 Sum_probs=19.2
Q ss_pred CCCccEeecCCCCHHHHHHHHHh
Q 024564 53 KSPVTICGDIHGQFHDLAELFQI 75 (266)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~ 75 (266)
++.=-+++|+||.|++|..+|+.
T Consensus 37 KgTEHF~SDvHGEYeaF~hVLrN 59 (648)
T COG3855 37 KGTEHFMSDVHGEYEAFNHVLRN 59 (648)
T ss_pred cchhhhhhhhhchHHHHHHHHHc
Confidence 44557899999999999999874
No 145
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=32.60 E-value=1.8e+02 Score=21.17 Aligned_cols=56 Identities=16% Similarity=0.107 Sum_probs=31.6
Q ss_pred ecCCCCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEEcc
Q 024564 60 GDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRG 120 (266)
Q Consensus 60 GDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~lrG 120 (266)
|-+|=-+..|...+..++..++..+|+. +..|..|......|..+. +++.++.|.|
T Consensus 45 gainip~~~l~~~~~~l~~~~~~~ivv~---C~~G~rs~~a~~~L~~~G--~~~~v~~l~g 100 (109)
T cd01533 45 GSVSCPGAELVLRVGELAPDPRTPIVVN---CAGRTRSIIGAQSLINAG--LPNPVAALRN 100 (109)
T ss_pred CceeCCHHHHHHHHHhcCCCCCCeEEEE---CCCCchHHHHHHHHHHCC--CCcceeEecC
Confidence 3344455666666666554444556664 556777776666665543 3222666665
No 146
>PRK04531 acetylglutamate kinase; Provisional
Probab=30.30 E-value=68 Score=30.16 Aligned_cols=22 Identities=14% Similarity=0.197 Sum_probs=13.6
Q ss_pred cHHHHHHHHHHHhhCCCeEEEE
Q 024564 97 SVETVTLLVALKVRYPQRITIL 118 (266)
Q Consensus 97 s~evl~~l~~l~~~~p~~v~~l 118 (266)
..|++.++...+...|.++++|
T Consensus 20 ~~e~~~~l~~F~~~~~~~~~VI 41 (398)
T PRK04531 20 AKEISQYLKRFSQLDAERFAVI 41 (398)
T ss_pred hhhhHHHHHHHhCcCCCcEEEE
Confidence 3567777777766556555544
No 147
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=29.39 E-value=2.2e+02 Score=26.56 Aligned_cols=69 Identities=17% Similarity=0.235 Sum_probs=45.3
Q ss_pred CCCccEeecCC-CCHHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCC-CeEEEEccCc
Q 024564 53 KSPVTICGDIH-GQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP-QRITILRGNH 122 (266)
Q Consensus 53 ~~~i~viGDiH-G~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p-~~v~~lrGNH 122 (266)
...+.+|=|-+ -+.+.+.++|+.+...+...++++|+...-|..+.+.-..+......+. +.+++ -|..
T Consensus 295 ~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~-~g~~ 365 (417)
T TIGR01143 295 KNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFL-VGEE 365 (417)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEE-ECHH
Confidence 34578888855 4889999888876533345677899998778888766555555443333 44444 4543
No 148
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=24.84 E-value=87 Score=27.69 Aligned_cols=66 Identities=17% Similarity=0.352 Sum_probs=28.5
Q ss_pred cCCCccEeecCCCC-------HHHHHHHHHhcCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEE-----Ec
Q 024564 52 VKSPVTICGDIHGQ-------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITI-----LR 119 (266)
Q Consensus 52 ~~~~i~viGDiHG~-------~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~-----lr 119 (266)
.+..++.+| ||+ |..|+..|+..+.+ =+|+|=+ +-.|.--+++..|..-. .++|.+ +-
T Consensus 140 ~~~a~vlmG--HGt~h~an~~Y~~l~~~l~~~~~~----~v~vgtv-EG~P~~~~vi~~L~~~g---~k~V~L~PlMlVA 209 (262)
T PF06180_consen 140 KDEAVVLMG--HGTPHPANAAYSALQAMLKKHGYP----NVFVGTV-EGYPSLEDVIARLKKKG---IKKVHLIPLMLVA 209 (262)
T ss_dssp TTEEEEEEE-----SCHHHHHHHHHHHHHHCCT-T----TEEEEET-TSSSBHHHHHHHHHHHT----SEEEEEEESSS-
T ss_pred CCCEEEEEe--CCCCCCccHHHHHHHHHHHhCCCC----eEEEEEe-CCCCCHHHHHHHHHhcC---CCeEEEEeccccc
Confidence 344566777 665 45555566553322 2344433 32344334555554432 334554 46
Q ss_pred cCchhhhh
Q 024564 120 GNHESRQI 127 (266)
Q Consensus 120 GNHE~~~~ 127 (266)
|+|=..-+
T Consensus 210 GdHa~nDm 217 (262)
T PF06180_consen 210 GDHAKNDM 217 (262)
T ss_dssp -HHHHCCC
T ss_pred chhhhhhh
Confidence 77765444
No 149
>PF07028 DUF1319: Protein of unknown function (DUF1319); InterPro: IPR010746 This entry is represented by Commelina yellow mottle virus, Orf1. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family contains a number of viral proteins of unknown function approximately 200 residues long. Family members seem to be restricted to badnaviruses.
Probab=24.64 E-value=1.1e+02 Score=23.86 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=21.3
Q ss_pred CCCChhcHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 024564 7 STDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEI 42 (266)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 42 (266)
-|+|..++++++..+...+.+-+.+...|.++..+.
T Consensus 87 RPLtk~dVeeLV~~IseQPK~IEkQte~LteEL~kk 122 (126)
T PF07028_consen 87 RPLTKEDVEELVLRISEQPKFIEKQTEALTEELTKK 122 (126)
T ss_pred CCCCHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 466666666666666666555555555555555544
No 150
>PF08497 Radical_SAM_N: Radical SAM N-terminal; InterPro: IPR013704 This domain tends to occur to the N terminus of PF04055 from PFAM radical SAM domain in hypothetical bacterial proteins. Proteins in this entry are radical SAM proteins, they catalyse diverse reactions, including unusual methylations, isomerization, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. Evidence exists that these proteins generate a radical species by reductive cleavage of S:-adenosylmethionine (SAM) through an unusual Fe-S centre [, ].
Probab=24.09 E-value=1e+02 Score=27.76 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=28.2
Q ss_pred HHhcCCCCCCceEeecc-cccCCCCcHHHHHHHHHH
Q 024564 73 FQIGGKCPDTNYLFMGD-YVDRGYYSVETVTLLVAL 107 (266)
Q Consensus 73 l~~~~~~~~~~~vfLGD-~vdrG~~s~evl~~l~~l 107 (266)
++..|+..-+-+++.|| |||.-.....+|-.+++-
T Consensus 9 m~~rGWd~lDvilVtGDAYVDHPsFG~AiIgR~Le~ 44 (302)
T PF08497_consen 9 MKARGWDELDVILVTGDAYVDHPSFGAAIIGRVLEA 44 (302)
T ss_pred HHHcCCccccEEEEeCcccccCcchhHHHHHHHHHH
Confidence 45678877788888999 899988898888877653
No 151
>smart00549 TAFH TAF homology. Domain in Drosophila nervy, CBFA2T1, human TAF105, human TAF130, and Drosophila TAF110. Also known as nervy homology region 1 (NHR1).
Probab=23.22 E-value=1.4e+02 Score=22.00 Aligned_cols=33 Identities=6% Similarity=0.140 Sum_probs=26.4
Q ss_pred CCCChhcHHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 024564 7 STDTTTDLDEQISQLMQCKPLSEPQVKALCEKAK 40 (266)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 40 (266)
+|++.+.+.++|..+.+.. ++.+|+..-+.++.
T Consensus 21 qpe~~~~Vr~LV~~L~~~~-i~~EeF~~~Lq~~l 53 (92)
T smart00549 21 QPEVAERVRTLVLGLVNGT-ITAEEFTSRLQEAL 53 (92)
T ss_pred cchHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Confidence 3889999999999999865 88888776666554
No 152
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=22.18 E-value=3.1e+02 Score=20.34 Aligned_cols=37 Identities=24% Similarity=0.490 Sum_probs=25.1
Q ss_pred cCCCCCCceEeecccccCCCCcHHHHHHHHHHHhhCCCeEEEE
Q 024564 76 GGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 118 (266)
Q Consensus 76 ~~~~~~~~~vfLGD~vdrG~~s~evl~~l~~l~~~~p~~v~~l 118 (266)
+..-|+.++|++||= |..-.|+...+ ...+|++|.++
T Consensus 59 ~~~fP~~kfiLIGDs---gq~DpeiY~~i---a~~~P~~i~ai 95 (100)
T PF09949_consen 59 LRDFPERKFILIGDS---GQHDPEIYAEI---ARRFPGRILAI 95 (100)
T ss_pred HHHCCCCcEEEEeeC---CCcCHHHHHHH---HHHCCCCEEEE
Confidence 334567889999985 55557777765 44588887654
No 153
>PRK14981 DNA-directed RNA polymerase subunit F; Provisional
Probab=21.80 E-value=1.9e+02 Score=21.89 Aligned_cols=35 Identities=14% Similarity=0.214 Sum_probs=18.3
Q ss_pred CCCCChhcHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 024564 6 LSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEI 42 (266)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 42 (266)
+.|.+...+.+++.... ..++++++.+|++.+++.
T Consensus 76 L~P~~~dElrai~~~~~--~~~~~e~l~~ILd~l~k~ 110 (112)
T PRK14981 76 ILPETRDELRAIFAKER--YTLSPEELDEILDIVKKY 110 (112)
T ss_pred cCCCCHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHh
Confidence 44555555555555552 235555555555555443
No 154
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=21.45 E-value=2.4e+02 Score=18.13 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=26.8
Q ss_pred hhcHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhC
Q 024564 11 TTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEE 46 (266)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 46 (266)
...++.+++++.++ .++-++...+.+++.++++.-
T Consensus 5 ~~~Le~Iv~~Le~~-~~sLdes~~lyeeg~~l~~~c 39 (53)
T PF02609_consen 5 MERLEEIVEKLESG-ELSLDESLKLYEEGMELIKKC 39 (53)
T ss_dssp HHHHHHHHHHHHTT--S-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH
Confidence 45688888888875 589999999999998887653
No 155
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=20.85 E-value=1.6e+02 Score=24.98 Aligned_cols=30 Identities=17% Similarity=-0.001 Sum_probs=25.5
Q ss_pred eeCHHHHHHHHHHCCCceEEEcccCcccce
Q 024564 223 TFGQDISEQFNHTNNLKLIARAHQLVMDGF 252 (266)
Q Consensus 223 ~fG~~~~~~fl~~~~~~~iirgH~~~~~G~ 252 (266)
.+|...+.+++++.+++++|-||....-+.
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~~ 224 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFGP 224 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCCC
Confidence 577888999999999999999999876543
No 156
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=20.84 E-value=4.3e+02 Score=25.31 Aligned_cols=94 Identities=16% Similarity=0.140 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCCccEeec-CCCCHHHHHHHHHhcCCCCCCc-eEeecccccCCCCcHHHHHHH
Q 024564 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGD-IHGQFHDLAELFQIGGKCPDTN-YLFMGDYVDRGYYSVETVTLL 104 (266)
Q Consensus 27 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~viGD-iHG~~~~l~~ll~~~~~~~~~~-~vfLGD~vdrG~~s~evl~~l 104 (266)
++.+++..-+.+...+=.+.. .......+.+|-| ..++.+.+...++.....+... ++.|||+..=|.+|.++=..+
T Consensus 300 ~~~e~i~~~L~~~~~~~gR~~-~~~~~~g~~iIdD~YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v 378 (451)
T COG0770 300 LDLEEIAAGLKELKPVKGRLE-VILLANGKTLIDDSYNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEV 378 (451)
T ss_pred CCHHHHHHHHHhcCCCCccce-eEecCCCcEEEEcCCCCCHHHHHHHHHHHhhCccCCcEEEeCChhhhCccHHHHHHHH
Confidence 566666555554443321111 1223344455555 5678888888888766555544 788999999999998877766
Q ss_pred HHHHhhCCCeEEEEccC
Q 024564 105 VALKVRYPQRITILRGN 121 (266)
Q Consensus 105 ~~l~~~~p~~v~~lrGN 121 (266)
-+.-....-...++-|.
T Consensus 379 ~~~~~~~~~d~v~~~G~ 395 (451)
T COG0770 379 GEYAVEAGIDLVFLVGE 395 (451)
T ss_pred HHHHHhcCceEEEEEcc
Confidence 65544432246677787
No 157
>COG3792 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.66 E-value=22 Score=27.54 Aligned_cols=32 Identities=25% Similarity=0.419 Sum_probs=20.2
Q ss_pred cEeecCCC------CHHHHHHHHHhcCCCCCCceEeecccccCCC
Q 024564 57 TICGDIHG------QFHDLAELFQIGGKCPDTNYLFMGDYVDRGY 95 (266)
Q Consensus 57 ~viGDiHG------~~~~l~~ll~~~~~~~~~~~vfLGD~vdrG~ 95 (266)
.-+||.|| ..++++...+. -++.+|||.|+|.
T Consensus 24 ~yi~~~~g~~~~~~d~dsfeE~knd-------f~~ll~~lld~G~ 61 (122)
T COG3792 24 NYIGDAYGLSSGQRDPDSFEERKND-------FFFLLGDLLDEGK 61 (122)
T ss_pred HHHHHHhCCccccCChhhHHHHHHH-------HHHHHHHHhcCCe
Confidence 45677777 66666665543 2455788888753
No 158
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=20.38 E-value=65 Score=28.34 Aligned_cols=36 Identities=22% Similarity=0.233 Sum_probs=13.5
Q ss_pred eEeecccccCCCC-cHHHHHHHHHHHhhCCCeEEEEccCchh
Q 024564 84 YLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRGNHES 124 (266)
Q Consensus 84 ~vfLGD~vdrG~~-s~evl~~l~~l~~~~p~~v~~lrGNHE~ 124 (266)
+|..|.=...|.. +.+....|+++-.. ++=.|||=.
T Consensus 31 VIaNgENaa~G~Git~~~~~~L~~~GvD-----viT~GNH~w 67 (253)
T PF13277_consen 31 VIANGENAAGGFGITPKIAEELFKAGVD-----VITMGNHIW 67 (253)
T ss_dssp EEEE-TTTTTTSS--HHHHHHHHHHT-S-----EEE--TTTT
T ss_pred EEECCcccCCCCCCCHHHHHHHHhcCCC-----EEecCcccc
Confidence 3344554443332 34444555444332 334555544
No 159
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=20.19 E-value=7.4e+02 Score=23.69 Aligned_cols=88 Identities=10% Similarity=0.012 Sum_probs=54.8
Q ss_pred HhcCCCCCHHHHHHHHHHHHHHHhhCC--CccccCCCccEeecCCCCHHHHHHHHHh--cC-CCCCCceEeecccccCCC
Q 024564 21 LMQCKPLSEPQVKALCEKAKEILMEES--NVQPVKSPVTICGDIHGQFHDLAELFQI--GG-KCPDTNYLFMGDYVDRGY 95 (266)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~~~l~~~~--~~~~~~~~i~viGDiHG~~~~l~~ll~~--~~-~~~~~~~vfLGD~vdrG~ 95 (266)
....+.+++++...|.+...++..... .+.........-.|+|-+.+.....+.. .+ .......+--|++|+.|-
T Consensus 59 l~~~Giip~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~~h~~~~vh~G~ 138 (464)
T PRK00485 59 NAELGLLDAEKADAIVAAADEVIAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQ 138 (464)
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHhCccccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCccCccccCCCCC
Confidence 446678999999999888877754322 1211122234578889998877665432 22 111134455689999999
Q ss_pred CcHHHHHHHHHHH
Q 024564 96 YSVETVTLLVALK 108 (266)
Q Consensus 96 ~s~evl~~l~~l~ 108 (266)
-+.+++.--+.|.
T Consensus 139 SrnD~v~Ta~~L~ 151 (464)
T PRK00485 139 SSNDTFPTAMHIA 151 (464)
T ss_pred CchhHHHHHHHHH
Confidence 8877766655554
Done!