Query 024565
Match_columns 265
No_of_seqs 142 out of 1479
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 10:29:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024565.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024565hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v1y_O PP38, glyceraldehyde-3- 100.0 1.5E-62 5E-67 432.6 26.0 264 1-265 1-265 (337)
2 3pym_A GAPDH 3, glyceraldehyde 100.0 4.4E-62 1.5E-66 428.8 27.7 261 3-265 1-261 (332)
3 3lvf_P GAPDH 1, glyceraldehyde 100.0 5.5E-61 1.9E-65 422.2 27.0 260 3-265 4-266 (338)
4 4dib_A GAPDH, glyceraldehyde 3 100.0 1.1E-60 3.6E-65 420.9 25.9 259 3-265 4-264 (345)
5 3doc_A Glyceraldehyde 3-phosph 100.0 1.7E-60 5.8E-65 419.2 27.1 259 3-265 2-263 (335)
6 3h9e_O Glyceraldehyde-3-phosph 100.0 2.5E-60 8.4E-65 419.8 28.0 260 3-265 7-267 (346)
7 3ids_C GAPDH, glyceraldehyde-3 100.0 1.5E-60 5.2E-65 421.9 24.9 262 3-265 2-278 (359)
8 2b4r_O Glyceraldehyde-3-phosph 100.0 2E-59 6.9E-64 415.3 26.0 263 1-265 9-274 (345)
9 1u8f_O GAPDH, glyceraldehyde-3 100.0 3.1E-59 1.1E-63 417.8 25.2 263 1-265 1-263 (335)
10 1gad_O D-glyceraldehyde-3-phos 100.0 5.1E-59 1.8E-63 414.6 25.6 259 3-265 1-260 (330)
11 3cmc_O GAPDH, glyceraldehyde-3 100.0 1.3E-58 4.3E-63 412.4 27.3 259 3-265 1-261 (334)
12 1obf_O Glyceraldehyde 3-phosph 100.0 2.3E-58 7.8E-63 408.0 27.7 259 3-265 1-264 (335)
13 2ep7_A GAPDH, glyceraldehyde-3 100.0 1.6E-58 5.6E-63 409.5 23.5 259 3-265 2-263 (342)
14 1hdg_O Holo-D-glyceraldehyde-3 100.0 3.6E-58 1.2E-62 409.1 25.7 258 4-265 1-261 (332)
15 3e5r_O PP38, glyceraldehyde-3- 100.0 5.9E-58 2E-62 409.1 26.6 265 1-265 1-265 (337)
16 3cps_A Glyceraldehyde 3-phosph 100.0 3.8E-58 1.3E-62 410.9 25.1 263 1-265 15-281 (354)
17 3hja_A GAPDH, glyceraldehyde-3 100.0 2E-58 6.7E-63 408.0 22.6 258 3-265 21-285 (356)
18 1rm4_O Glyceraldehyde 3-phosph 100.0 5.8E-57 2E-61 401.2 27.7 260 3-265 1-263 (337)
19 2d2i_A Glyceraldehyde 3-phosph 100.0 1.3E-56 4.3E-61 403.4 27.1 259 3-265 2-265 (380)
20 2g82_O GAPDH, glyceraldehyde-3 100.0 1.1E-56 3.9E-61 398.7 25.5 257 4-265 1-259 (331)
21 3b1j_A Glyceraldehyde 3-phosph 100.0 7E-56 2.4E-60 395.4 28.8 259 3-265 2-265 (339)
22 2x5j_O E4PDH, D-erythrose-4-ph 100.0 3.2E-56 1.1E-60 397.9 25.8 259 3-265 2-265 (339)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 5.6E-45 1.9E-49 326.2 15.4 235 2-265 1-248 (343)
24 2r00_A Aspartate-semialdehyde 100.0 3.7E-43 1.3E-47 314.3 22.7 234 1-265 1-266 (336)
25 2yv3_A Aspartate-semialdehyde 100.0 7.1E-42 2.4E-46 305.3 21.6 228 4-265 1-260 (331)
26 2hjs_A USG-1 protein homolog; 100.0 1.1E-41 3.8E-46 305.3 19.9 231 3-265 6-268 (340)
27 1cf2_P Protein (glyceraldehyde 100.0 1.3E-42 4.6E-47 310.7 12.7 231 3-265 1-241 (337)
28 3pwk_A Aspartate-semialdehyde 100.0 3.9E-41 1.3E-45 302.9 20.9 232 3-265 2-274 (366)
29 3tz6_A Aspartate-semialdehyde 100.0 6.9E-41 2.4E-45 299.2 21.2 231 4-265 2-277 (344)
30 4dpk_A Malonyl-COA/succinyl-CO 100.0 3E-41 1E-45 303.8 18.6 236 3-265 7-270 (359)
31 4dpl_A Malonyl-COA/succinyl-CO 100.0 3E-41 1E-45 303.8 16.6 236 3-265 7-270 (359)
32 3hsk_A Aspartate-semialdehyde 100.0 2.1E-41 7.1E-46 306.2 12.5 240 1-265 17-296 (381)
33 2ep5_A 350AA long hypothetical 100.0 6.5E-41 2.2E-45 301.6 12.3 237 2-265 3-266 (350)
34 3uw3_A Aspartate-semialdehyde 100.0 9.5E-41 3.2E-45 301.3 10.9 233 3-265 4-304 (377)
35 3pzr_A Aspartate-semialdehyde 100.0 4.3E-40 1.5E-44 296.3 13.2 232 4-265 1-296 (370)
36 3dr3_A N-acetyl-gamma-glutamyl 100.0 5E-40 1.7E-44 293.1 11.7 226 3-265 4-264 (337)
37 1t4b_A Aspartate-semialdehyde 100.0 1.4E-39 4.9E-44 293.8 13.8 233 3-265 1-296 (367)
38 2ozp_A N-acetyl-gamma-glutamyl 100.0 6.3E-39 2.2E-43 287.9 17.0 229 1-265 1-259 (345)
39 1xyg_A Putative N-acetyl-gamma 100.0 1.2E-39 4E-44 294.0 12.0 232 1-265 14-277 (359)
40 2nqt_A N-acetyl-gamma-glutamyl 100.0 5.9E-39 2E-43 288.1 11.8 234 1-265 7-270 (352)
41 1ys4_A Aspartate-semialdehyde 100.0 2.6E-38 8.8E-43 285.2 14.7 239 2-265 7-272 (354)
42 1vkn_A N-acetyl-gamma-glutamyl 100.0 4.7E-39 1.6E-43 287.5 9.7 227 3-265 13-269 (351)
43 1b7g_O Protein (glyceraldehyde 100.0 2.7E-37 9.2E-42 276.7 15.9 222 3-265 1-241 (340)
44 2czc_A Glyceraldehyde-3-phosph 100.0 1.5E-36 5.2E-41 271.6 14.9 230 2-264 1-238 (334)
45 1nvm_B Acetaldehyde dehydrogen 99.2 4.3E-11 1.5E-15 105.5 10.9 209 1-262 2-225 (312)
46 4fb5_A Probable oxidoreductase 99.0 6.6E-10 2.3E-14 100.0 7.4 93 1-123 23-123 (393)
47 4had_A Probable oxidoreductase 99.0 5.1E-10 1.7E-14 99.8 6.4 92 2-123 22-115 (350)
48 3gdo_A Uncharacterized oxidore 99.0 1.2E-09 3.9E-14 98.1 7.8 91 1-123 3-94 (358)
49 3fhl_A Putative oxidoreductase 98.9 1.2E-09 4.2E-14 98.0 7.6 91 1-123 3-94 (362)
50 4h3v_A Oxidoreductase domain p 98.9 3.9E-10 1.3E-14 101.4 3.8 93 1-123 4-104 (390)
51 4ew6_A D-galactose-1-dehydroge 98.9 1.1E-09 3.6E-14 97.3 6.2 86 1-123 23-110 (330)
52 3e18_A Oxidoreductase; dehydro 98.9 1.4E-09 4.7E-14 97.6 6.0 92 1-123 3-94 (359)
53 3m2t_A Probable dehydrogenase; 98.9 3E-09 1E-13 95.4 7.8 93 1-123 3-97 (359)
54 3evn_A Oxidoreductase, GFO/IDH 98.9 2.4E-09 8.2E-14 94.8 7.0 93 1-123 3-96 (329)
55 3ec7_A Putative dehydrogenase; 98.9 3.3E-09 1.1E-13 95.1 7.9 94 1-123 21-116 (357)
56 3kux_A Putative oxidoreductase 98.9 3E-09 1E-13 95.1 7.4 90 2-123 6-96 (352)
57 3i23_A Oxidoreductase, GFO/IDH 98.9 2.8E-09 9.6E-14 95.2 7.0 92 3-123 2-94 (349)
58 3rc1_A Sugar 3-ketoreductase; 98.9 2.4E-09 8.2E-14 95.7 6.4 92 1-123 25-118 (350)
59 3f4l_A Putative oxidoreductase 98.9 3.9E-09 1.3E-13 94.1 7.7 91 3-123 2-94 (345)
60 3e82_A Putative oxidoreductase 98.9 3.7E-09 1.3E-13 95.0 7.5 89 3-123 7-96 (364)
61 1f06_A MESO-diaminopimelate D- 98.8 8.8E-09 3E-13 91.0 9.2 89 1-125 1-89 (320)
62 4f3y_A DHPR, dihydrodipicolina 98.8 1.1E-09 3.8E-14 94.6 3.2 97 1-123 5-102 (272)
63 3e9m_A Oxidoreductase, GFO/IDH 98.8 3.4E-09 1.2E-13 93.9 5.9 93 1-123 3-96 (330)
64 3db2_A Putative NADPH-dependen 98.8 3.8E-09 1.3E-13 94.4 5.9 91 2-123 4-95 (354)
65 3bio_A Oxidoreductase, GFO/IDH 98.8 5.7E-09 1.9E-13 91.6 6.6 88 1-123 7-94 (304)
66 3euw_A MYO-inositol dehydrogen 98.8 6.4E-09 2.2E-13 92.5 6.9 92 1-123 1-94 (344)
67 4gqa_A NAD binding oxidoreduct 98.8 2.9E-09 9.9E-14 97.1 4.6 91 3-123 26-125 (412)
68 2ixa_A Alpha-N-acetylgalactosa 98.8 8.4E-09 2.9E-13 95.1 7.5 100 1-123 18-120 (444)
69 3mz0_A Inositol 2-dehydrogenas 98.8 8.7E-09 3E-13 91.7 7.2 92 3-123 2-95 (344)
70 3ezy_A Dehydrogenase; structur 98.8 7.8E-09 2.7E-13 92.0 6.5 91 3-123 2-93 (344)
71 4hkt_A Inositol 2-dehydrogenas 98.8 7.7E-09 2.6E-13 91.5 6.3 89 3-123 3-92 (331)
72 3q2i_A Dehydrogenase; rossmann 98.8 6.5E-09 2.2E-13 92.9 5.7 91 2-123 12-104 (354)
73 3uuw_A Putative oxidoreductase 98.7 4.1E-09 1.4E-13 92.3 3.9 90 1-123 4-95 (308)
74 1lc0_A Biliverdin reductase A; 98.7 1.2E-08 4.2E-13 88.9 6.8 86 2-123 6-94 (294)
75 3ohs_X Trans-1,2-dihydrobenzen 98.7 1.3E-08 4.3E-13 90.3 6.9 91 3-123 2-95 (334)
76 1ydw_A AX110P-like protein; st 98.7 1.3E-08 4.3E-13 91.3 6.6 96 1-123 4-100 (362)
77 1h6d_A Precursor form of gluco 98.7 2.1E-08 7E-13 92.2 7.6 97 1-123 81-179 (433)
78 3qy9_A DHPR, dihydrodipicolina 98.7 2.7E-08 9.3E-13 84.4 6.9 81 1-123 1-81 (243)
79 2p2s_A Putative oxidoreductase 98.7 2.3E-08 7.7E-13 88.7 6.5 92 1-123 2-95 (336)
80 3o9z_A Lipopolysaccaride biosy 98.7 3.8E-08 1.3E-12 86.6 7.7 90 3-123 3-101 (312)
81 2ho3_A Oxidoreductase, GFO/IDH 98.7 4.6E-08 1.6E-12 86.2 8.1 90 3-123 1-91 (325)
82 1tlt_A Putative oxidoreductase 98.7 2.5E-08 8.6E-13 87.7 6.4 90 1-123 3-94 (319)
83 3u3x_A Oxidoreductase; structu 98.7 1.9E-08 6.4E-13 90.3 5.5 92 1-123 24-117 (361)
84 3cea_A MYO-inositol 2-dehydrog 98.7 3.6E-08 1.2E-12 87.6 7.1 92 2-123 7-100 (346)
85 3c1a_A Putative oxidoreductase 98.6 2.7E-08 9.2E-13 87.4 5.9 90 2-123 9-98 (315)
86 1zh8_A Oxidoreductase; TM0312, 98.6 3.5E-08 1.2E-12 87.7 6.5 91 3-123 18-111 (340)
87 3upl_A Oxidoreductase; rossman 98.6 5.1E-08 1.7E-12 89.4 7.5 109 2-123 22-137 (446)
88 3oa2_A WBPB; oxidoreductase, s 98.6 5.9E-08 2E-12 85.6 7.7 91 3-123 3-102 (318)
89 3moi_A Probable dehydrogenase; 98.6 1.6E-08 5.6E-13 91.5 4.1 90 3-123 2-93 (387)
90 3ijp_A DHPR, dihydrodipicolina 98.6 2.5E-08 8.5E-13 86.6 4.8 94 2-123 20-117 (288)
91 2ejw_A HDH, homoserine dehydro 98.6 1.7E-07 5.9E-12 83.0 10.1 87 1-123 1-96 (332)
92 3mtj_A Homoserine dehydrogenas 98.6 5.8E-08 2E-12 89.2 7.1 91 1-123 8-108 (444)
93 3dty_A Oxidoreductase, GFO/IDH 98.6 2.5E-08 8.6E-13 90.6 3.5 95 1-123 10-114 (398)
94 3ip3_A Oxidoreductase, putativ 98.6 1.9E-08 6.6E-13 89.2 2.5 93 3-123 2-96 (337)
95 3v5n_A Oxidoreductase; structu 98.5 8.2E-08 2.8E-12 87.8 6.4 95 1-123 35-139 (417)
96 3ing_A Homoserine dehydrogenas 98.5 2.1E-07 7.3E-12 82.2 8.8 104 1-123 2-115 (325)
97 3c8m_A Homoserine dehydrogenas 98.5 5.7E-08 1.9E-12 86.2 5.1 103 1-123 4-119 (331)
98 2nvw_A Galactose/lactose metab 98.5 6E-08 2.1E-12 90.3 5.3 96 1-123 37-143 (479)
99 3btv_A Galactose/lactose metab 98.5 3.6E-08 1.2E-12 90.7 3.7 95 2-123 19-124 (438)
100 1dih_A Dihydrodipicolinate red 98.5 1.1E-07 3.8E-12 82.1 6.3 95 1-123 3-101 (273)
101 4gmf_A Yersiniabactin biosynth 98.5 2.9E-07 1E-11 82.9 7.7 87 3-123 7-99 (372)
102 3do5_A HOM, homoserine dehydro 98.4 1.9E-07 6.5E-12 82.6 5.5 97 3-123 2-113 (327)
103 1xea_A Oxidoreductase, GFO/IDH 98.4 4.3E-07 1.5E-11 80.0 7.0 89 3-123 2-92 (323)
104 3oqb_A Oxidoreductase; structu 98.4 1.9E-07 6.5E-12 84.2 4.1 93 1-123 4-112 (383)
105 2dc1_A L-aspartate dehydrogena 98.3 5.3E-07 1.8E-11 75.9 5.9 79 4-123 1-79 (236)
106 1p9l_A Dihydrodipicolinate red 98.3 1.8E-06 6.1E-11 73.3 9.1 73 4-123 1-74 (245)
107 2glx_A 1,5-anhydro-D-fructose 98.3 6.6E-07 2.3E-11 78.9 6.0 89 4-123 1-91 (332)
108 2dt5_A AT-rich DNA-binding pro 98.2 1.9E-06 6.5E-11 71.5 6.5 90 3-123 80-170 (211)
109 1ebf_A Homoserine dehydrogenas 98.2 9.7E-07 3.3E-11 79.0 3.8 35 2-36 3-40 (358)
110 3ic5_A Putative saccharopine d 98.1 5.4E-06 1.8E-10 61.1 5.9 98 3-126 5-102 (118)
111 2vt3_A REX, redox-sensing tran 98.0 6.7E-06 2.3E-10 68.4 6.5 91 3-124 85-176 (215)
112 1j5p_A Aspartate dehydrogenase 98.0 1.1E-05 3.8E-10 68.4 7.0 80 3-124 12-91 (253)
113 2nu8_A Succinyl-COA ligase [AD 97.9 2.8E-05 9.6E-10 67.5 8.0 87 3-123 7-94 (288)
114 3keo_A Redox-sensing transcrip 97.8 1.2E-05 4.2E-10 66.5 4.5 96 3-125 84-180 (212)
115 4ina_A Saccharopine dehydrogen 97.8 2.8E-05 9.7E-10 70.6 6.8 145 3-169 1-157 (405)
116 1r0k_A 1-deoxy-D-xylulose 5-ph 97.6 7E-05 2.4E-09 67.4 6.5 113 1-123 1-122 (388)
117 1y81_A Conserved hypothetical 97.6 0.00022 7.7E-09 54.9 8.6 83 2-123 13-99 (138)
118 4huj_A Uncharacterized protein 97.6 2.5E-05 8.5E-10 64.9 2.5 36 1-37 21-56 (220)
119 3abi_A Putative uncharacterize 97.6 3.8E-05 1.3E-09 68.7 3.6 87 3-118 16-102 (365)
120 1oi7_A Succinyl-COA synthetase 97.5 0.00016 5.6E-09 62.6 7.0 87 3-123 7-94 (288)
121 3b1f_A Putative prephenate deh 97.5 0.00026 8.9E-09 60.9 7.5 84 1-115 4-88 (290)
122 3a06_A 1-deoxy-D-xylulose 5-ph 97.4 0.0002 6.8E-09 63.6 6.5 112 1-123 1-114 (376)
123 3nkl_A UDP-D-quinovosamine 4-d 97.4 0.00038 1.3E-08 53.1 7.4 92 2-122 3-97 (141)
124 2duw_A Putative COA-binding pr 97.4 0.00037 1.3E-08 54.0 7.2 84 3-123 13-100 (145)
125 3d1l_A Putative NADP oxidoredu 97.4 0.00021 7.3E-09 60.6 6.0 86 3-123 10-99 (266)
126 2d59_A Hypothetical protein PH 97.4 0.00058 2E-08 52.8 7.6 82 3-123 22-107 (144)
127 2yv1_A Succinyl-COA ligase [AD 97.3 0.00045 1.5E-08 60.0 7.0 87 3-123 13-100 (294)
128 2i76_A Hypothetical protein; N 97.2 5.5E-05 1.9E-09 64.9 0.3 84 3-123 2-86 (276)
129 2yv2_A Succinyl-COA synthetase 97.2 0.00091 3.1E-08 58.1 7.9 87 3-123 13-101 (297)
130 3tri_A Pyrroline-5-carboxylate 97.1 0.00055 1.9E-08 58.9 5.9 37 1-37 1-38 (280)
131 3ius_A Uncharacterized conserv 97.1 0.0042 1.4E-07 52.7 11.1 34 2-36 4-37 (286)
132 3ggo_A Prephenate dehydrogenas 97.0 0.0015 5.1E-08 57.1 7.6 89 2-123 32-125 (314)
133 1iuk_A Hypothetical protein TT 97.0 0.0016 5.4E-08 50.1 6.6 84 3-123 13-100 (140)
134 3ff4_A Uncharacterized protein 97.0 0.0021 7.2E-08 48.3 7.1 82 3-124 4-89 (122)
135 3qvo_A NMRA family protein; st 97.0 0.0015 5.1E-08 54.2 6.9 35 1-35 21-56 (236)
136 3g79_A NDP-N-acetyl-D-galactos 96.9 0.0028 9.6E-08 58.6 8.8 33 2-34 17-50 (478)
137 1bg6_A N-(1-D-carboxylethyl)-L 96.9 0.00061 2.1E-08 60.1 4.1 34 1-36 2-35 (359)
138 1vm6_A DHPR, dihydrodipicolina 96.9 0.0016 5.5E-08 54.1 6.0 69 4-123 13-82 (228)
139 3gpi_A NAD-dependent epimerase 96.9 0.0016 5.5E-08 55.4 6.3 35 1-36 1-35 (286)
140 3ego_A Probable 2-dehydropanto 96.8 0.0039 1.3E-07 54.2 8.7 30 3-34 2-31 (307)
141 2ew2_A 2-dehydropantoate 2-red 96.8 0.0023 8E-08 55.1 7.1 32 1-33 1-32 (316)
142 3g0o_A 3-hydroxyisobutyrate de 96.8 0.002 7E-08 55.7 6.3 32 3-36 7-38 (303)
143 3e48_A Putative nucleoside-dip 96.7 0.0026 8.8E-08 54.1 6.7 94 4-123 1-103 (289)
144 3dhn_A NAD-dependent epimerase 96.7 0.0023 7.8E-08 52.4 6.0 35 1-36 1-37 (227)
145 2ahr_A Putative pyrroline carb 96.7 0.00026 8.8E-09 59.9 0.2 33 3-37 3-35 (259)
146 4e21_A 6-phosphogluconate dehy 96.7 0.00099 3.4E-08 59.4 3.8 34 2-37 21-54 (358)
147 2izz_A Pyrroline-5-carboxylate 96.7 0.0012 4.1E-08 57.8 4.2 36 1-37 20-58 (322)
148 3doj_A AT3G25530, dehydrogenas 96.7 0.0013 4.4E-08 57.3 4.3 34 2-37 20-53 (310)
149 1vpd_A Tartronate semialdehyde 96.6 0.001 3.5E-08 57.2 3.5 32 3-36 5-36 (299)
150 3qsg_A NAD-binding phosphogluc 96.6 0.0015 5.1E-08 57.0 4.3 82 3-115 24-105 (312)
151 3c24_A Putative oxidoreductase 96.6 0.0033 1.1E-07 53.8 6.1 84 3-123 11-98 (286)
152 2h78_A Hibadh, 3-hydroxyisobut 96.6 0.0014 4.7E-08 56.7 3.6 33 2-36 2-34 (302)
153 3ghy_A Ketopantoate reductase 96.6 0.00076 2.6E-08 59.4 2.0 33 1-34 1-33 (335)
154 4dll_A 2-hydroxy-3-oxopropiona 96.5 0.002 6.9E-08 56.3 4.5 32 3-36 31-62 (320)
155 2rcy_A Pyrroline carboxylate r 96.5 0.0013 4.6E-08 55.4 3.3 26 1-26 2-27 (262)
156 2z2v_A Hypothetical protein PH 96.5 0.0021 7.3E-08 57.4 4.7 87 3-119 16-103 (365)
157 3pef_A 6-phosphogluconate dehy 96.5 0.0024 8.1E-08 54.8 4.8 32 4-37 2-33 (287)
158 2x0j_A Malate dehydrogenase; o 96.5 0.0071 2.4E-07 52.4 7.7 34 4-37 1-34 (294)
159 1hdo_A Biliverdin IX beta redu 96.4 0.0038 1.3E-07 49.9 5.5 34 1-35 1-35 (206)
160 3gt0_A Pyrroline-5-carboxylate 96.4 0.0012 4E-08 55.5 2.2 35 3-37 2-38 (247)
161 3pid_A UDP-glucose 6-dehydroge 96.4 0.0047 1.6E-07 56.4 6.3 31 2-34 35-65 (432)
162 3dqp_A Oxidoreductase YLBE; al 96.4 0.011 3.9E-07 48.0 8.2 32 4-36 1-33 (219)
163 4ezb_A Uncharacterized conserv 96.4 0.0083 2.8E-07 52.4 7.6 83 3-114 24-108 (317)
164 3cky_A 2-hydroxymethyl glutara 96.4 0.0022 7.6E-08 55.2 3.8 32 3-36 4-35 (301)
165 4gbj_A 6-phosphogluconate dehy 96.3 0.0089 3.1E-07 51.7 7.4 31 4-36 6-36 (297)
166 3qha_A Putative oxidoreductase 96.3 0.0039 1.3E-07 53.8 5.1 32 3-36 15-46 (296)
167 1yb4_A Tartronic semialdehyde 96.3 0.0015 5.1E-08 56.1 2.4 31 3-35 3-33 (295)
168 3i6i_A Putative leucoanthocyan 96.3 0.0017 5.8E-08 57.0 2.7 102 1-125 8-119 (346)
169 1evy_A Glycerol-3-phosphate de 96.3 0.0017 5.7E-08 57.8 2.4 32 3-36 15-46 (366)
170 3e8x_A Putative NAD-dependent 96.2 0.039 1.3E-06 45.3 10.7 34 2-36 20-54 (236)
171 2fp4_A Succinyl-COA ligase [GD 96.2 0.0086 2.9E-07 52.1 6.8 87 3-123 13-101 (305)
172 1qyc_A Phenylcoumaran benzylic 96.2 0.0041 1.4E-07 53.2 4.7 103 1-126 1-114 (308)
173 1qyd_A Pinoresinol-lariciresin 96.2 0.0046 1.6E-07 53.0 5.0 35 1-36 1-37 (313)
174 1yqg_A Pyrroline-5-carboxylate 96.2 0.0039 1.3E-07 52.5 4.3 33 4-37 1-33 (263)
175 2f1k_A Prephenate dehydrogenas 96.2 0.0051 1.8E-07 52.3 5.0 78 4-114 1-78 (279)
176 3r6d_A NAD-dependent epimerase 96.1 0.0074 2.5E-07 49.2 5.7 35 2-36 4-39 (221)
177 1x0v_A GPD-C, GPDH-C, glycerol 96.1 0.0083 2.8E-07 52.8 6.3 25 1-25 6-30 (354)
178 3i83_A 2-dehydropantoate 2-red 96.1 0.0092 3.2E-07 52.0 6.5 89 3-114 2-92 (320)
179 2axq_A Saccharopine dehydrogen 96.1 0.0058 2E-07 56.4 5.4 91 2-118 22-113 (467)
180 2g5c_A Prephenate dehydrogenas 96.1 0.0052 1.8E-07 52.3 4.8 32 4-36 2-34 (281)
181 2uyy_A N-PAC protein; long-cha 96.0 0.0032 1.1E-07 54.7 3.1 32 3-36 30-61 (316)
182 1i36_A Conserved hypothetical 96.0 0.0098 3.3E-07 50.1 6.1 85 4-123 1-85 (264)
183 3hwr_A 2-dehydropantoate 2-red 96.0 0.013 4.5E-07 51.0 6.8 89 3-114 19-107 (318)
184 2vns_A Metalloreductase steap3 96.0 0.0079 2.7E-07 49.4 5.1 32 3-36 28-59 (215)
185 3k96_A Glycerol-3-phosphate de 96.0 0.0077 2.6E-07 53.6 5.3 32 3-36 29-60 (356)
186 3pdu_A 3-hydroxyisobutyrate de 95.9 0.0024 8.1E-08 54.8 1.7 31 4-36 2-32 (287)
187 1ur5_A Malate dehydrogenase; o 95.9 0.0071 2.4E-07 52.7 4.8 34 3-37 2-35 (309)
188 2hmt_A YUAA protein; RCK, KTN, 95.9 0.023 7.9E-07 42.5 7.2 31 3-34 6-36 (144)
189 2zyd_A 6-phosphogluconate dehy 95.9 0.0064 2.2E-07 56.3 4.6 34 1-36 13-46 (480)
190 3dtt_A NADP oxidoreductase; st 95.9 0.0078 2.7E-07 50.4 4.7 33 2-36 18-50 (245)
191 2hjr_A Malate dehydrogenase; m 95.9 0.014 4.9E-07 51.2 6.5 35 3-38 14-48 (328)
192 3ew7_A LMO0794 protein; Q8Y8U8 95.8 0.025 8.5E-07 45.6 7.5 32 4-36 1-33 (221)
193 2iz1_A 6-phosphogluconate dehy 95.8 0.0069 2.3E-07 56.0 4.5 34 1-36 3-36 (474)
194 3gg2_A Sugar dehydrogenase, UD 95.8 0.013 4.5E-07 53.7 6.3 31 2-33 1-31 (450)
195 2cvz_A Dehydrogenase, 3-hydrox 95.8 0.0077 2.6E-07 51.3 4.3 30 4-36 2-31 (289)
196 1ff9_A Saccharopine reductase; 95.7 0.013 4.5E-07 53.7 6.0 92 1-118 1-93 (450)
197 2gf2_A Hibadh, 3-hydroxyisobut 95.7 0.0047 1.6E-07 52.9 2.7 31 4-36 1-31 (296)
198 2r6j_A Eugenol synthase 1; phe 95.7 0.0072 2.5E-07 52.1 3.9 97 4-126 12-116 (318)
199 3p7m_A Malate dehydrogenase; p 95.7 0.011 3.6E-07 51.9 4.9 36 1-37 3-38 (321)
200 1t2d_A LDH-P, L-lactate dehydr 95.7 0.0095 3.3E-07 52.2 4.7 37 1-38 1-38 (322)
201 1zcj_A Peroxisomal bifunctiona 95.7 0.025 8.4E-07 52.1 7.6 33 2-36 36-68 (463)
202 1y6j_A L-lactate dehydrogenase 95.7 0.03 1E-06 48.9 7.8 35 3-37 7-41 (318)
203 2wm3_A NMRA-like family domain 95.7 0.0076 2.6E-07 51.5 4.0 34 3-36 5-39 (299)
204 3evt_A Phosphoglycerate dehydr 95.7 0.015 5.1E-07 51.1 5.8 30 4-34 138-167 (324)
205 1np3_A Ketol-acid reductoisome 95.7 0.0035 1.2E-07 55.3 1.8 32 3-36 16-47 (338)
206 3obb_A Probable 3-hydroxyisobu 95.7 0.0065 2.2E-07 52.7 3.4 33 3-37 3-35 (300)
207 3ldh_A Lactate dehydrogenase; 95.6 0.023 7.8E-07 50.0 6.9 35 3-37 21-55 (330)
208 3oj0_A Glutr, glutamyl-tRNA re 95.6 0.0039 1.4E-07 47.6 1.7 32 4-37 22-53 (144)
209 2g1u_A Hypothetical protein TM 95.6 0.027 9.3E-07 43.4 6.5 31 3-34 19-49 (155)
210 1hyh_A L-hicdh, L-2-hydroxyiso 95.6 0.035 1.2E-06 48.1 7.8 34 4-37 2-35 (309)
211 3l6d_A Putative oxidoreductase 95.6 0.0042 1.4E-07 53.9 1.9 33 3-37 9-41 (306)
212 1ks9_A KPA reductase;, 2-dehyd 95.6 0.031 1E-06 47.4 7.3 30 4-34 1-30 (291)
213 1zej_A HBD-9, 3-hydroxyacyl-CO 95.5 0.034 1.2E-06 48.0 7.5 30 4-36 13-42 (293)
214 3hn2_A 2-dehydropantoate 2-red 95.5 0.011 3.7E-07 51.4 4.4 31 3-34 2-32 (312)
215 1z82_A Glycerol-3-phosphate de 95.5 0.01 3.5E-07 52.0 4.3 32 3-36 14-45 (335)
216 2qyt_A 2-dehydropantoate 2-red 95.5 0.0073 2.5E-07 52.1 3.2 32 3-34 8-44 (317)
217 1lld_A L-lactate dehydrogenase 95.5 0.04 1.4E-06 47.7 7.9 33 3-36 7-40 (319)
218 3m2p_A UDP-N-acetylglucosamine 95.5 0.034 1.2E-06 47.6 7.3 33 3-36 2-35 (311)
219 2pv7_A T-protein [includes: ch 95.5 0.04 1.4E-06 47.5 7.7 28 3-31 21-49 (298)
220 2csu_A 457AA long hypothetical 95.4 0.053 1.8E-06 49.8 8.9 84 2-123 7-94 (457)
221 1yj8_A Glycerol-3-phosphate de 95.4 0.017 5.8E-07 51.4 5.3 23 3-25 21-43 (375)
222 3gvi_A Malate dehydrogenase; N 95.4 0.013 4.4E-07 51.4 4.3 36 1-37 5-40 (324)
223 3c1o_A Eugenol synthase; pheny 95.3 0.01 3.4E-07 51.2 3.5 101 3-126 4-114 (321)
224 2raf_A Putative dinucleotide-b 95.3 0.039 1.3E-06 45.0 6.6 24 3-26 19-42 (209)
225 3mog_A Probable 3-hydroxybutyr 95.2 0.028 9.7E-07 52.0 6.4 33 3-37 5-37 (483)
226 2gas_A Isoflavone reductase; N 95.2 0.0074 2.5E-07 51.6 2.3 32 3-35 2-34 (307)
227 2b69_A UDP-glucuronate decarbo 95.2 0.14 4.9E-06 44.3 10.5 33 2-35 26-59 (343)
228 1ldn_A L-lactate dehydrogenase 95.2 0.017 5.9E-07 50.4 4.5 35 3-37 6-40 (316)
229 4aj2_A L-lactate dehydrogenase 95.2 0.032 1.1E-06 49.1 6.2 36 2-37 18-53 (331)
230 3nep_X Malate dehydrogenase; h 95.2 0.015 5.1E-07 50.8 4.0 34 4-37 1-34 (314)
231 2v6b_A L-LDH, L-lactate dehydr 95.1 0.053 1.8E-06 46.9 7.5 34 4-37 1-34 (304)
232 2bka_A CC3, TAT-interacting pr 95.1 0.1 3.5E-06 42.7 8.8 33 3-35 18-52 (242)
233 3vku_A L-LDH, L-lactate dehydr 95.0 0.067 2.3E-06 46.9 7.9 36 2-37 8-43 (326)
234 3pqe_A L-LDH, L-lactate dehydr 95.0 0.019 6.6E-07 50.3 4.3 34 3-36 5-38 (326)
235 3d4o_A Dipicolinate synthase s 95.0 0.029 1E-06 48.2 5.4 32 3-36 155-186 (293)
236 3l4b_C TRKA K+ channel protien 95.0 0.022 7.7E-07 46.5 4.5 31 4-35 1-31 (218)
237 2x4g_A Nucleoside-diphosphate- 95.0 0.06 2E-06 46.5 7.4 33 3-36 13-46 (342)
238 3hg7_A D-isomer specific 2-hyd 94.9 0.02 6.9E-07 50.2 4.2 31 3-34 140-170 (324)
239 3g17_A Similar to 2-dehydropan 94.9 0.028 9.5E-07 48.3 5.0 31 3-34 2-32 (294)
240 2pgd_A 6-phosphogluconate dehy 94.9 0.029 9.9E-07 51.9 5.4 32 3-36 2-33 (482)
241 2ph5_A Homospermidine synthase 94.8 0.044 1.5E-06 50.4 6.4 93 3-123 13-111 (480)
242 2rir_A Dipicolinate synthase, 94.8 0.023 7.8E-07 49.0 4.3 31 3-34 157-187 (300)
243 1mv8_A GMD, GDP-mannose 6-dehy 94.7 0.047 1.6E-06 49.7 6.3 31 4-36 1-31 (436)
244 1txg_A Glycerol-3-phosphate de 94.7 0.03 1E-06 48.6 4.8 30 4-34 1-30 (335)
245 3tl2_A Malate dehydrogenase; c 94.6 0.013 4.5E-07 51.2 2.3 34 3-37 8-41 (315)
246 4dgs_A Dehydrogenase; structur 94.6 0.029 1E-06 49.5 4.5 30 3-33 171-200 (340)
247 3sc6_A DTDP-4-dehydrorhamnose 94.6 0.025 8.5E-07 47.8 3.9 31 4-35 6-37 (287)
248 3pp8_A Glyoxylate/hydroxypyruv 94.5 0.019 6.6E-07 50.1 3.0 31 3-34 139-169 (315)
249 3slg_A PBGP3 protein; structur 94.4 0.032 1.1E-06 49.1 4.3 36 1-36 22-58 (372)
250 2p4q_A 6-phosphogluconate dehy 94.4 0.041 1.4E-06 51.1 5.1 33 3-37 10-42 (497)
251 1ez4_A Lactate dehydrogenase; 94.3 0.043 1.5E-06 47.9 4.9 34 4-37 6-39 (318)
252 2zcu_A Uncharacterized oxidore 94.3 0.046 1.6E-06 45.9 5.0 32 5-36 1-34 (286)
253 2jl1_A Triphenylmethane reduct 94.3 0.052 1.8E-06 45.7 5.2 33 4-36 1-35 (287)
254 1xgk_A Nitrogen metabolite rep 94.3 0.086 2.9E-06 46.3 6.8 33 3-36 5-38 (352)
255 3jtm_A Formate dehydrogenase, 94.1 0.037 1.3E-06 49.0 4.0 29 4-33 165-193 (351)
256 4a7p_A UDP-glucose dehydrogena 94.0 0.073 2.5E-06 48.7 6.0 32 3-35 8-39 (446)
257 3oh8_A Nucleoside-diphosphate 94.0 0.38 1.3E-05 44.4 11.0 33 3-36 147-180 (516)
258 1oju_A MDH, malate dehydrogena 93.9 0.034 1.2E-06 48.0 3.4 34 4-37 1-34 (294)
259 4h7p_A Malate dehydrogenase; s 93.9 0.067 2.3E-06 47.3 5.2 27 1-27 22-49 (345)
260 3hhp_A Malate dehydrogenase; M 93.9 0.063 2.2E-06 46.7 5.0 34 4-37 1-36 (312)
261 1a5z_A L-lactate dehydrogenase 93.8 0.14 4.7E-06 44.6 7.1 34 4-37 1-34 (319)
262 3llv_A Exopolyphosphatase-rela 93.8 0.05 1.7E-06 40.9 3.8 32 3-35 6-37 (141)
263 2gn4_A FLAA1 protein, UDP-GLCN 93.7 0.08 2.8E-06 46.3 5.5 34 2-35 20-55 (344)
264 2o3j_A UDP-glucose 6-dehydroge 93.6 0.049 1.7E-06 50.3 4.1 33 2-34 8-41 (481)
265 3ktd_A Prephenate dehydrogenas 93.6 0.026 8.8E-07 49.9 2.0 32 3-36 8-39 (341)
266 1id1_A Putative potassium chan 93.5 0.071 2.4E-06 40.8 4.2 34 1-35 1-34 (153)
267 1guz_A Malate dehydrogenase; o 93.5 0.081 2.8E-06 45.9 5.0 32 4-36 1-33 (310)
268 2q3e_A UDP-glucose 6-dehydroge 93.4 0.058 2E-06 49.6 4.1 33 1-33 2-36 (467)
269 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.4 0.055 1.9E-06 49.9 3.9 31 4-36 2-32 (478)
270 1lss_A TRK system potassium up 93.3 0.092 3.1E-06 38.9 4.5 31 3-34 4-34 (140)
271 2hk9_A Shikimate dehydrogenase 93.2 0.11 3.8E-06 44.1 5.3 33 3-37 129-161 (275)
272 3dfz_A SIRC, precorrin-2 dehyd 93.2 0.36 1.2E-05 39.8 8.2 86 3-118 31-116 (223)
273 4e12_A Diketoreductase; oxidor 93.1 0.098 3.3E-06 44.6 4.9 34 2-37 3-36 (283)
274 1x7d_A Ornithine cyclodeaminas 93.1 0.042 1.4E-06 48.7 2.5 35 3-37 129-163 (350)
275 4fgw_A Glycerol-3-phosphate de 93.0 0.073 2.5E-06 47.8 4.1 97 3-114 34-138 (391)
276 3d0o_A L-LDH 1, L-lactate dehy 93.0 0.081 2.8E-06 46.1 4.3 37 1-37 4-40 (317)
277 3mwd_B ATP-citrate synthase; A 93.0 0.24 8.2E-06 43.5 7.2 93 3-123 10-110 (334)
278 2j6i_A Formate dehydrogenase; 92.6 0.091 3.1E-06 46.7 4.1 32 3-36 164-196 (364)
279 3hdj_A Probable ornithine cycl 92.4 0.029 9.9E-07 48.9 0.6 38 4-42 122-159 (313)
280 1xq6_A Unknown protein; struct 92.3 0.19 6.6E-06 41.0 5.4 35 1-35 2-38 (253)
281 1q0q_A 1-deoxy-D-xylulose 5-ph 92.2 0.18 6E-06 45.0 5.3 108 3-118 9-126 (406)
282 2y1e_A 1-deoxy-D-xylulose 5-ph 92.2 0.16 5.5E-06 45.1 5.0 107 3-118 21-130 (398)
283 1wdk_A Fatty oxidation complex 92.1 0.18 6.1E-06 48.9 5.7 32 3-36 314-345 (715)
284 3phh_A Shikimate dehydrogenase 91.9 0.84 2.9E-05 38.7 9.2 32 4-37 119-150 (269)
285 3eag_A UDP-N-acetylmuramate:L- 91.9 0.5 1.7E-05 41.0 8.0 87 3-118 4-91 (326)
286 4gwg_A 6-phosphogluconate dehy 91.9 0.11 3.9E-06 47.9 3.9 35 1-37 2-36 (484)
287 3c7a_A Octopine dehydrogenase; 91.7 0.17 5.7E-06 45.3 4.8 32 3-34 2-33 (404)
288 3au8_A 1-deoxy-D-xylulose 5-ph 91.6 0.17 5.8E-06 46.0 4.6 42 1-43 75-121 (488)
289 3fr7_A Putative ketol-acid red 91.5 0.075 2.6E-06 49.1 2.2 29 4-32 55-88 (525)
290 2hun_A 336AA long hypothetical 91.4 0.17 5.7E-06 43.5 4.3 35 1-35 1-37 (336)
291 2d4a_B Malate dehydrogenase; a 91.2 0.19 6.4E-06 43.6 4.4 32 5-37 1-32 (308)
292 1f0y_A HCDH, L-3-hydroxyacyl-C 91.2 0.23 7.7E-06 42.6 4.9 32 3-36 15-46 (302)
293 3fwz_A Inner membrane protein 91.0 0.21 7.3E-06 37.5 4.1 32 3-35 7-38 (140)
294 2ewd_A Lactate dehydrogenase,; 91.0 0.24 8.1E-06 42.9 4.9 36 1-37 1-37 (317)
295 1oc2_A DTDP-glucose 4,6-dehydr 90.9 0.19 6.7E-06 43.3 4.3 35 1-35 1-38 (348)
296 4b8w_A GDP-L-fucose synthase; 90.9 0.19 6.5E-06 42.4 4.1 27 1-27 4-31 (319)
297 3dfu_A Uncharacterized protein 90.5 0.091 3.1E-06 43.7 1.7 33 2-35 5-37 (232)
298 1pzg_A LDH, lactate dehydrogen 90.4 0.27 9.3E-06 43.0 4.7 35 3-38 9-43 (331)
299 2dpo_A L-gulonate 3-dehydrogen 90.4 0.23 7.9E-06 43.3 4.2 34 2-37 5-38 (319)
300 3kkj_A Amine oxidase, flavin-c 90.3 0.23 7.8E-06 39.8 4.0 30 3-33 2-31 (336)
301 3ruf_A WBGU; rossmann fold, UD 90.3 0.25 8.4E-06 42.8 4.4 34 2-36 24-58 (351)
302 1e6u_A GDP-fucose synthetase; 90.0 0.25 8.4E-06 42.1 4.0 32 1-33 1-33 (321)
303 3ce6_A Adenosylhomocysteinase; 89.9 0.26 8.8E-06 45.6 4.3 31 4-36 275-305 (494)
304 4egb_A DTDP-glucose 4,6-dehydr 89.9 0.27 9.4E-06 42.4 4.3 35 2-36 23-59 (346)
305 3lk7_A UDP-N-acetylmuramoylala 89.9 1.1 3.6E-05 40.8 8.4 86 4-118 10-97 (451)
306 2pi1_A D-lactate dehydrogenase 89.4 0.34 1.2E-05 42.5 4.5 30 4-34 142-171 (334)
307 3h2s_A Putative NADH-flavin re 89.4 0.44 1.5E-05 38.2 4.9 32 4-36 1-33 (224)
308 4g2n_A D-isomer specific 2-hyd 89.3 0.37 1.3E-05 42.4 4.7 29 4-33 174-202 (345)
309 4b4o_A Epimerase family protei 89.3 0.38 1.3E-05 40.6 4.7 31 4-35 1-32 (298)
310 2a35_A Hypothetical protein PA 89.1 0.33 1.1E-05 38.6 3.9 32 3-34 5-38 (215)
311 3vps_A TUNA, NAD-dependent epi 89.1 0.38 1.3E-05 40.8 4.5 32 3-35 7-39 (321)
312 1qp8_A Formate dehydrogenase; 89.1 0.42 1.4E-05 41.2 4.8 30 3-33 124-153 (303)
313 2bma_A Glutamate dehydrogenase 89.0 1.9 6.7E-05 39.4 9.3 104 3-123 252-365 (470)
314 2dbq_A Glyoxylate reductase; D 89.0 0.44 1.5E-05 41.7 4.9 32 3-36 150-181 (334)
315 2gcg_A Glyoxylate reductase/hy 88.9 0.4 1.4E-05 41.8 4.6 31 3-34 155-185 (330)
316 3fi9_A Malate dehydrogenase; s 88.9 0.37 1.3E-05 42.5 4.3 36 1-36 6-42 (343)
317 3gg9_A D-3-phosphoglycerate de 88.7 0.41 1.4E-05 42.3 4.5 31 3-34 160-190 (352)
318 3c85_A Putative glutathione-re 88.6 0.3 1E-05 38.3 3.4 31 3-34 39-70 (183)
319 1jay_A Coenzyme F420H2:NADP+ o 88.6 0.58 2E-05 37.5 5.1 30 4-34 1-31 (212)
320 1xdw_A NAD+-dependent (R)-2-hy 88.6 0.43 1.5E-05 41.7 4.5 29 4-33 147-175 (331)
321 1gdh_A D-glycerate dehydrogena 88.5 0.46 1.6E-05 41.3 4.7 31 3-34 146-176 (320)
322 3gvx_A Glycerate dehydrogenase 88.5 0.35 1.2E-05 41.6 3.8 29 4-33 123-151 (290)
323 2cuk_A Glycerate dehydrogenase 88.5 0.5 1.7E-05 40.9 4.9 29 3-32 144-172 (311)
324 1dlj_A UDP-glucose dehydrogena 88.5 0.39 1.3E-05 43.1 4.3 28 4-33 1-28 (402)
325 3two_A Mannitol dehydrogenase; 88.4 0.57 2E-05 40.8 5.3 81 4-117 178-258 (348)
326 1dxy_A D-2-hydroxyisocaproate 88.4 0.44 1.5E-05 41.7 4.5 29 4-33 146-174 (333)
327 3sxp_A ADP-L-glycero-D-mannohe 88.3 0.43 1.5E-05 41.5 4.5 33 3-35 10-44 (362)
328 2yq5_A D-isomer specific 2-hyd 88.3 0.46 1.6E-05 41.8 4.5 30 4-34 149-178 (343)
329 1wwk_A Phosphoglycerate dehydr 88.2 0.54 1.8E-05 40.6 4.9 30 3-33 142-171 (307)
330 2d0i_A Dehydrogenase; structur 88.2 0.5 1.7E-05 41.3 4.7 32 3-36 146-177 (333)
331 2w2k_A D-mandelate dehydrogena 88.2 0.5 1.7E-05 41.6 4.8 31 4-36 164-195 (348)
332 4e5n_A Thermostable phosphite 88.2 0.39 1.3E-05 42.0 4.0 32 3-36 145-176 (330)
333 2g76_A 3-PGDH, D-3-phosphoglyc 88.1 0.51 1.7E-05 41.4 4.7 31 3-34 165-195 (335)
334 1gpj_A Glutamyl-tRNA reductase 88.1 0.41 1.4E-05 43.0 4.2 32 3-36 167-199 (404)
335 2ekl_A D-3-phosphoglycerate de 88.0 0.56 1.9E-05 40.6 4.9 30 3-33 142-171 (313)
336 1sb8_A WBPP; epimerase, 4-epim 87.8 0.48 1.6E-05 41.0 4.4 33 2-35 26-59 (352)
337 1mx3_A CTBP1, C-terminal bindi 87.8 0.61 2.1E-05 41.0 5.1 32 3-36 168-199 (347)
338 3ba1_A HPPR, hydroxyphenylpyru 87.8 0.49 1.7E-05 41.4 4.4 29 3-32 164-192 (333)
339 1j4a_A D-LDH, D-lactate dehydr 87.7 0.52 1.8E-05 41.2 4.5 29 4-33 147-175 (333)
340 1y7t_A Malate dehydrogenase; N 87.6 0.51 1.7E-05 40.9 4.4 27 1-27 1-29 (327)
341 4hy3_A Phosphoglycerate oxidor 87.5 0.49 1.7E-05 42.0 4.3 29 4-33 177-205 (365)
342 3oet_A Erythronate-4-phosphate 87.5 0.53 1.8E-05 42.0 4.5 29 4-33 120-148 (381)
343 4g65_A TRK system potassium up 87.5 0.54 1.8E-05 43.0 4.7 31 3-34 3-33 (461)
344 2i99_A MU-crystallin homolog; 87.3 0.5 1.7E-05 40.8 4.2 35 3-37 135-169 (312)
345 2zqz_A L-LDH, L-lactate dehydr 87.3 0.52 1.8E-05 41.1 4.3 34 3-36 9-42 (326)
346 2o4c_A Erythronate-4-phosphate 87.1 0.58 2E-05 41.8 4.5 30 3-33 116-145 (380)
347 4ea9_A Perosamine N-acetyltran 87.1 0.67 2.3E-05 37.6 4.6 35 2-37 11-45 (220)
348 3iwa_A FAD-dependent pyridine 87.0 0.42 1.4E-05 43.5 3.7 35 1-35 1-36 (472)
349 3kd9_A Coenzyme A disulfide re 86.9 0.5 1.7E-05 42.6 4.1 34 1-34 1-35 (449)
350 2y0c_A BCEC, UDP-glucose dehyd 86.9 0.59 2E-05 43.0 4.6 30 3-33 8-37 (478)
351 1b8p_A Protein (malate dehydro 86.9 0.56 1.9E-05 40.8 4.3 26 2-27 4-30 (329)
352 2bll_A Protein YFBG; decarboxy 86.7 0.71 2.4E-05 39.5 4.8 33 4-36 1-34 (345)
353 1smk_A Malate dehydrogenase, g 86.7 0.73 2.5E-05 40.1 4.9 34 3-36 8-42 (326)
354 7mdh_A Protein (malate dehydro 86.7 0.55 1.9E-05 41.9 4.1 26 3-28 32-58 (375)
355 3kb6_A D-lactate dehydrogenase 86.6 0.6 2E-05 40.9 4.3 29 4-33 142-170 (334)
356 1gtm_A Glutamate dehydrogenase 86.4 0.76 2.6E-05 41.6 5.0 34 3-37 212-246 (419)
357 1sc6_A PGDH, D-3-phosphoglycer 86.3 0.61 2.1E-05 41.9 4.3 28 4-32 146-173 (404)
358 2z1m_A GDP-D-mannose dehydrata 86.3 0.74 2.5E-05 39.3 4.7 34 1-35 1-35 (345)
359 2q1w_A Putative nucleotide sug 86.3 0.83 2.8E-05 39.2 5.0 33 2-35 20-53 (333)
360 3u62_A Shikimate dehydrogenase 86.2 0.27 9.4E-06 41.3 1.8 31 5-36 110-140 (253)
361 3vtf_A UDP-glucose 6-dehydroge 86.2 0.58 2E-05 42.7 4.1 30 3-33 21-50 (444)
362 1pjq_A CYSG, siroheme synthase 86.2 3.1 0.0001 37.9 9.0 86 3-119 12-99 (457)
363 3k6j_A Protein F01G10.3, confi 86.1 0.78 2.7E-05 42.0 4.9 33 2-36 53-85 (460)
364 2q1s_A Putative nucleotide sug 86.1 0.76 2.6E-05 40.3 4.8 33 3-35 32-65 (377)
365 4hb9_A Similarities with proba 86.1 0.73 2.5E-05 40.3 4.6 29 4-33 2-30 (412)
366 4a9w_A Monooxygenase; baeyer-v 85.6 0.61 2.1E-05 39.9 3.8 32 1-33 1-32 (357)
367 2nac_A NAD-dependent formate d 85.5 0.84 2.9E-05 40.9 4.8 30 3-33 191-220 (393)
368 2c20_A UDP-glucose 4-epimerase 85.5 0.86 3E-05 38.8 4.7 32 3-35 1-33 (330)
369 1bgv_A Glutamate dehydrogenase 85.5 2.4 8.3E-05 38.6 7.8 103 3-123 230-343 (449)
370 3k5p_A D-3-phosphoglycerate de 85.4 0.74 2.5E-05 41.6 4.3 29 4-33 157-185 (416)
371 3ngx_A Bifunctional protein fo 85.2 1.6 5.6E-05 37.0 6.1 29 4-33 151-180 (276)
372 3hyw_A Sulfide-quinone reducta 85.1 0.71 2.4E-05 41.5 4.1 34 1-35 1-35 (430)
373 1mld_A Malate dehydrogenase; o 85.1 0.84 2.9E-05 39.5 4.4 34 4-37 1-35 (314)
374 3ehe_A UDP-glucose 4-epimerase 85.1 0.76 2.6E-05 39.0 4.1 31 4-36 2-33 (313)
375 3h5n_A MCCB protein; ubiquitin 85.0 3 0.0001 36.6 8.1 33 3-36 118-150 (353)
376 2hrz_A AGR_C_4963P, nucleoside 84.8 0.78 2.7E-05 39.4 4.1 34 1-34 12-52 (342)
377 2yy7_A L-threonine dehydrogena 84.7 0.68 2.3E-05 39.1 3.6 33 3-35 2-36 (312)
378 1omo_A Alanine dehydrogenase; 84.6 0.84 2.9E-05 39.6 4.2 35 3-37 125-159 (322)
379 2ywl_A Thioredoxin reductase r 84.6 0.95 3.3E-05 35.0 4.2 31 3-34 1-31 (180)
380 2c5a_A GDP-mannose-3', 5'-epim 84.5 1.2 4.1E-05 39.0 5.3 32 3-35 29-61 (379)
381 4fcc_A Glutamate dehydrogenase 84.4 3.3 0.00011 37.7 8.1 101 3-120 235-345 (450)
382 3st7_A Capsular polysaccharide 84.4 0.63 2.2E-05 40.6 3.4 30 4-33 1-31 (369)
383 1rkx_A CDP-glucose-4,6-dehydra 84.3 0.9 3.1E-05 39.3 4.4 34 2-36 8-42 (357)
384 2yjz_A Metalloreductase steap4 84.6 0.2 6.8E-06 40.5 0.0 29 2-31 18-46 (201)
385 2ydy_A Methionine adenosyltran 84.1 1.1 3.8E-05 37.9 4.7 31 3-34 2-33 (315)
386 4a26_A Putative C-1-tetrahydro 83.8 3.5 0.00012 35.4 7.7 27 4-31 166-193 (300)
387 2xxj_A L-LDH, L-lactate dehydr 83.8 1.1 3.8E-05 38.6 4.6 34 4-37 1-34 (310)
388 3rft_A Uronate dehydrogenase; 83.7 0.85 2.9E-05 37.9 3.8 33 1-34 1-34 (267)
389 3don_A Shikimate dehydrogenase 83.7 0.55 1.9E-05 40.0 2.6 32 4-36 118-149 (277)
390 2bi7_A UDP-galactopyranose mut 83.5 1.2 4.2E-05 39.4 5.0 33 1-34 1-33 (384)
391 2x6t_A ADP-L-glycero-D-manno-h 83.5 1 3.5E-05 39.0 4.3 33 3-35 46-79 (357)
392 1orr_A CDP-tyvelose-2-epimeras 83.4 1.1 3.8E-05 38.3 4.5 30 4-34 2-32 (347)
393 1y1p_A ARII, aldehyde reductas 83.3 1.5 5.1E-05 37.3 5.3 33 2-35 10-43 (342)
394 3bfp_A Acetyltransferase; LEFT 83.2 0.9 3.1E-05 36.2 3.6 35 1-36 1-35 (194)
395 3d1c_A Flavin-containing putat 83.1 1 3.6E-05 38.9 4.2 32 1-33 2-34 (369)
396 1ygy_A PGDH, D-3-phosphoglycer 83.1 1.3 4.5E-05 41.2 5.1 33 3-37 142-174 (529)
397 4hv4_A UDP-N-acetylmuramate--L 83.1 2.4 8.2E-05 39.0 6.8 83 4-118 23-106 (494)
398 1z7e_A Protein aRNA; rossmann 83.0 1.2 4.2E-05 42.3 5.0 35 2-36 314-349 (660)
399 2cul_A Glucose-inhibited divis 83.0 1 3.5E-05 36.7 3.9 33 1-34 1-33 (232)
400 1kew_A RMLB;, DTDP-D-glucose 4 82.9 1 3.6E-05 38.8 4.2 32 4-35 1-33 (361)
401 3r3j_A Glutamate dehydrogenase 82.6 2.3 8E-05 38.7 6.4 104 3-123 239-352 (456)
402 1o6z_A MDH, malate dehydrogena 82.3 1.4 4.7E-05 37.9 4.6 33 4-36 1-34 (303)
403 1yqd_A Sinapyl alcohol dehydro 82.2 1.2 4E-05 39.2 4.2 31 4-35 189-219 (366)
404 3qj4_A Renalase; FAD/NAD(P)-bi 82.2 1.6 5.5E-05 37.5 5.1 31 3-33 1-33 (342)
405 3o8q_A Shikimate 5-dehydrogena 82.2 3.3 0.00011 35.2 6.9 34 3-37 126-159 (281)
406 2vou_A 2,6-dihydroxypyridine h 82.2 1.5 5E-05 38.7 4.9 31 2-33 4-34 (397)
407 2xdo_A TETX2 protein; tetracyc 82.1 1.6 5.4E-05 38.5 5.1 30 3-33 26-55 (398)
408 3lov_A Protoporphyrinogen oxid 82.1 1.1 3.7E-05 40.5 4.1 33 1-33 2-35 (475)
409 3ics_A Coenzyme A-disulfide re 82.1 1.1 3.8E-05 41.9 4.2 35 1-35 34-69 (588)
410 4dvj_A Putative zinc-dependent 82.0 1.7 5.8E-05 38.1 5.2 33 4-36 173-206 (363)
411 3ado_A Lambda-crystallin; L-gu 81.9 1.2 4.2E-05 38.7 4.1 32 4-37 7-38 (319)
412 2tmg_A Protein (glutamate dehy 81.8 1.9 6.7E-05 38.8 5.5 35 3-37 209-243 (415)
413 3alj_A 2-methyl-3-hydroxypyrid 81.8 1.4 4.9E-05 38.5 4.6 32 1-33 9-40 (379)
414 3fbs_A Oxidoreductase; structu 81.8 1.4 4.6E-05 36.6 4.3 31 3-34 2-32 (297)
415 3jv7_A ADH-A; dehydrogenase, n 81.7 1 3.6E-05 39.0 3.7 32 4-35 173-204 (345)
416 2pzm_A Putative nucleotide sug 81.7 1.7 5.7E-05 37.2 4.9 33 2-35 19-52 (330)
417 2i6t_A Ubiquitin-conjugating e 81.4 1.2 4.3E-05 38.2 4.0 35 3-37 14-48 (303)
418 1rp0_A ARA6, thiazole biosynth 81.1 1.2 4.1E-05 37.5 3.8 32 3-34 39-70 (284)
419 2b5w_A Glucose dehydrogenase; 80.9 3.2 0.00011 36.1 6.6 32 4-36 174-208 (357)
420 1ek6_A UDP-galactose 4-epimera 80.8 1.6 5.6E-05 37.3 4.6 32 2-34 1-33 (348)
421 1yvv_A Amine oxidase, flavin-c 80.6 1.3 4.6E-05 37.6 4.0 30 3-33 2-31 (336)
422 3enk_A UDP-glucose 4-epimerase 80.6 2.2 7.6E-05 36.4 5.4 32 3-35 5-37 (341)
423 4id9_A Short-chain dehydrogena 80.6 1.6 5.5E-05 37.4 4.5 32 3-35 19-51 (347)
424 1t2a_A GDP-mannose 4,6 dehydra 80.5 1.9 6.6E-05 37.5 5.0 32 4-36 25-57 (375)
425 3ip1_A Alcohol dehydrogenase, 80.4 4.8 0.00016 35.7 7.7 30 4-34 215-245 (404)
426 1yo6_A Putative carbonyl reduc 80.3 2.2 7.6E-05 34.4 5.1 35 1-35 1-37 (250)
427 2wtb_A MFP2, fatty acid multif 80.3 1.4 4.9E-05 42.6 4.4 30 3-33 312-341 (725)
428 1rpn_A GDP-mannose 4,6-dehydra 80.1 2 6.8E-05 36.6 4.9 33 3-36 14-47 (335)
429 2gv8_A Monooxygenase; FMO, FAD 80.0 2 7E-05 38.5 5.1 30 3-33 6-37 (447)
430 1hye_A L-lactate/malate dehydr 80.0 1.9 6.7E-05 37.1 4.8 33 4-36 1-34 (313)
431 3ko8_A NAD-dependent epimerase 79.8 1.8 6.2E-05 36.4 4.5 31 4-35 1-32 (312)
432 4g65_A TRK system potassium up 79.7 2 7E-05 39.1 5.0 93 4-123 236-331 (461)
433 3aog_A Glutamate dehydrogenase 79.5 2.4 8.3E-05 38.5 5.4 34 3-37 235-268 (440)
434 3ay3_A NAD-dependent epimerase 79.5 0.76 2.6E-05 38.1 1.9 31 3-34 2-33 (267)
435 4ej6_A Putative zinc-binding d 79.5 3 0.0001 36.6 5.9 30 4-34 184-214 (370)
436 1n7h_A GDP-D-mannose-4,6-dehyd 79.4 2.2 7.5E-05 37.2 5.0 32 4-36 29-61 (381)
437 3d64_A Adenosylhomocysteinase; 79.3 1.9 6.6E-05 39.7 4.7 30 3-33 277-306 (494)
438 3k5i_A Phosphoribosyl-aminoimi 79.1 1.7 5.8E-05 38.8 4.2 33 1-34 22-54 (403)
439 3d7l_A LIN1944 protein; APC893 79.1 2.7 9.2E-05 32.9 5.0 31 3-35 3-34 (202)
440 3orq_A N5-carboxyaminoimidazol 79.0 2.2 7.5E-05 37.6 4.9 31 3-34 12-42 (377)
441 3ouz_A Biotin carboxylase; str 78.8 1.6 5.4E-05 39.4 4.0 35 1-36 4-38 (446)
442 1obb_A Maltase, alpha-glucosid 78.7 1.7 5.9E-05 39.9 4.2 37 1-37 1-41 (480)
443 4f6c_A AUSA reductase domain p 78.7 2 7E-05 38.2 4.6 33 3-36 69-102 (427)
444 2d5c_A AROE, shikimate 5-dehyd 78.3 1.8 6.3E-05 36.0 4.0 31 5-37 118-148 (263)
445 3l9w_A Glutathione-regulated p 78.2 1.6 5.6E-05 39.2 3.8 32 3-35 4-35 (413)
446 2rh8_A Anthocyanidin reductase 78.0 2.6 9E-05 35.9 5.0 32 3-35 9-41 (338)
447 2pk3_A GDP-6-deoxy-D-LYXO-4-he 78.0 2.6 8.8E-05 35.6 4.9 32 3-35 12-44 (321)
448 3fpc_A NADP-dependent alcohol 77.9 6.6 0.00022 33.9 7.6 31 4-35 168-199 (352)
449 1leh_A Leucine dehydrogenase; 77.8 2.4 8.1E-05 37.5 4.7 32 3-36 173-204 (364)
450 3pwz_A Shikimate dehydrogenase 77.8 4.1 0.00014 34.4 6.0 33 4-37 121-153 (272)
451 2zbw_A Thioredoxin reductase; 77.8 2.1 7.1E-05 36.4 4.2 31 3-34 5-35 (335)
452 3rp8_A Flavoprotein monooxygen 77.7 2.3 7.8E-05 37.5 4.6 30 3-33 23-52 (407)
453 3c96_A Flavin-containing monoo 77.6 2 6.7E-05 38.0 4.2 31 2-33 3-34 (410)
454 3cgv_A Geranylgeranyl reductas 77.5 1.5 5.1E-05 38.2 3.4 32 1-33 2-33 (397)
455 1lqt_A FPRA; NADP+ derivative, 77.5 1.6 5.4E-05 39.7 3.5 35 1-35 1-41 (456)
456 3nzo_A UDP-N-acetylglucosamine 77.3 1.8 6.3E-05 38.4 3.9 32 3-34 35-67 (399)
457 2v6g_A Progesterone 5-beta-red 77.2 2.7 9.2E-05 36.1 4.9 33 4-36 2-39 (364)
458 3fef_A Putative glucosidase LP 77.1 1.5 5.1E-05 40.0 3.2 37 1-37 3-42 (450)
459 3sx6_A Sulfide-quinone reducta 76.9 1.9 6.4E-05 38.7 3.8 35 1-35 1-38 (437)
460 3oz2_A Digeranylgeranylglycero 76.9 1.6 5.5E-05 37.7 3.4 32 1-33 2-33 (397)
461 3h9u_A Adenosylhomocysteinase; 76.8 2.8 9.6E-05 38.0 4.9 32 3-36 211-242 (436)
462 1uuf_A YAHK, zinc-type alcohol 76.7 1.2 4.3E-05 39.1 2.6 31 4-35 196-226 (369)
463 1n2s_A DTDP-4-, DTDP-glucose o 76.5 2.2 7.5E-05 35.6 4.0 30 4-35 1-31 (299)
464 2c2x_A Methylenetetrahydrofola 76.4 5.2 0.00018 34.0 6.2 29 3-31 158-188 (281)
465 3nks_A Protoporphyrinogen oxid 76.4 2.5 8.4E-05 38.0 4.5 31 3-33 2-33 (477)
466 3q2o_A Phosphoribosylaminoimid 76.3 3.1 0.00011 36.6 5.1 32 3-35 14-45 (389)
467 1vl0_A DTDP-4-dehydrorhamnose 76.3 2.6 8.9E-05 35.1 4.4 32 3-35 12-44 (292)
468 3n58_A Adenosylhomocysteinase; 76.3 2.6 8.9E-05 38.4 4.5 29 4-33 248-276 (464)
469 2dkn_A 3-alpha-hydroxysteroid 76.3 3.7 0.00013 33.2 5.3 31 4-35 2-33 (255)
470 2dq4_A L-threonine 3-dehydroge 76.3 2.6 9E-05 36.4 4.5 31 4-35 166-197 (343)
471 1db3_A GDP-mannose 4,6-dehydra 76.3 2.7 9.2E-05 36.3 4.6 32 3-35 1-33 (372)
472 3ihm_A Styrene monooxygenase A 76.3 2 6.8E-05 38.5 3.9 31 3-34 22-52 (430)
473 3goh_A Alcohol dehydrogenase, 76.3 1.3 4.3E-05 37.9 2.4 30 4-34 144-173 (315)
474 3oc4_A Oxidoreductase, pyridin 76.2 2 6.8E-05 38.7 3.9 33 1-34 1-34 (452)
475 3jyo_A Quinate/shikimate dehyd 76.2 1.8 6.2E-05 36.8 3.4 33 4-37 128-160 (283)
476 1c1d_A L-phenylalanine dehydro 76.1 2.9 9.8E-05 36.9 4.7 32 4-37 176-207 (355)
477 1v8b_A Adenosylhomocysteinase; 76.0 2.3 7.9E-05 39.1 4.2 30 3-33 257-286 (479)
478 3h28_A Sulfide-quinone reducta 76.0 2.2 7.6E-05 38.1 4.1 33 3-35 2-35 (430)
479 1trb_A Thioredoxin reductase; 75.8 1.6 5.5E-05 36.8 3.0 31 2-33 4-34 (320)
480 3f8d_A Thioredoxin reductase ( 75.6 2.6 8.8E-05 35.3 4.2 30 3-33 15-44 (323)
481 1u8x_X Maltose-6'-phosphate gl 75.6 3.2 0.00011 38.1 5.0 35 3-37 28-66 (472)
482 1i24_A Sulfolipid biosynthesis 75.6 2.7 9.4E-05 36.7 4.5 31 3-34 11-42 (404)
483 1r6d_A TDP-glucose-4,6-dehydra 75.5 3.2 0.00011 35.4 4.8 32 4-35 1-38 (337)
484 1eq2_A ADP-L-glycero-D-mannohe 75.0 3.1 0.00011 34.7 4.6 31 5-35 1-32 (310)
485 3c4a_A Probable tryptophan hyd 74.9 2.4 8.1E-05 37.1 3.9 30 4-33 1-31 (381)
486 3i3l_A Alkylhalidase CMLS; fla 74.8 3.1 0.00011 39.2 4.9 32 1-33 21-52 (591)
487 3h8l_A NADH oxidase; membrane 74.8 1.9 6.5E-05 38.1 3.3 32 3-34 1-34 (409)
488 3ef6_A Toluene 1,2-dioxygenase 74.8 3.4 0.00012 36.6 5.0 35 2-36 1-36 (410)
489 3g3e_A D-amino-acid oxidase; F 74.6 2.5 8.5E-05 36.4 3.9 31 4-34 1-36 (351)
490 2cf5_A Atccad5, CAD, cinnamyl 74.5 1.5 5E-05 38.4 2.4 32 4-36 182-213 (357)
491 3ntd_A FAD-dependent pyridine 74.4 2.4 8.1E-05 39.2 4.0 33 3-35 1-34 (565)
492 2p5y_A UDP-glucose 4-epimerase 74.4 3.4 0.00012 34.7 4.7 30 4-34 1-31 (311)
493 3lzw_A Ferredoxin--NADP reduct 74.4 2.1 7.2E-05 36.1 3.4 31 3-34 7-37 (332)
494 4a2c_A Galactitol-1-phosphate 74.4 7.6 0.00026 33.3 7.0 32 4-36 162-193 (346)
495 4dqv_A Probable peptide synthe 73.9 2.9 9.9E-05 38.0 4.4 34 3-36 73-109 (478)
496 2bc0_A NADH oxidase; flavoprot 73.9 2.3 7.8E-05 38.8 3.7 32 3-34 35-68 (490)
497 3i6d_A Protoporphyrinogen oxid 73.7 2.7 9.4E-05 37.4 4.1 31 3-33 5-40 (470)
498 2aqj_A Tryptophan halogenase, 73.7 2.8 9.5E-05 38.7 4.2 32 3-34 5-38 (538)
499 3gqv_A Enoyl reductase; medium 73.5 5 0.00017 35.1 5.7 31 4-35 166-197 (371)
500 1gy8_A UDP-galactose 4-epimera 73.4 3.9 0.00013 35.6 5.0 31 4-35 3-35 (397)
No 1
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=1.5e-62 Score=432.61 Aligned_cols=264 Identities=88% Similarity=1.349 Sum_probs=250.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCccccc-ceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHH-ELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+++||||+|||+||+.++|++.+++++|+++|+|+..+.++++|||+|||+||+|. + ++..++++.|.++|+.+.++
T Consensus 1 m~~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEE
T ss_pred CCceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEE
Confidence 778999999999999999999999999999999998778999999999999999999 7 77776654699999999999
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCCCceEEeeeccccccCCCCeEEcCCCchhhh
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELNIVSNASCTTNCL 159 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~~~~~v~~vn~~~~~~~~~~Va~p~C~~ta~ 159 (265)
++.||++++|.+.++|+||+|||.+++++.++.++++|+|+++||+++.|+|++|||+|++.+++..++||||+|+|+++
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~L 159 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhH
Confidence 88899999998889999999999999999999999999999999999888999999999999987678999999999999
Q ss_pred HhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeee
Q 024565 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT 239 (265)
Q Consensus 160 ~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~ 239 (265)
+++|+||+++|||+++.+|++|++|++|+.+|+++.++|+++|++++|++|+.+|.++++.+++|+++++++.+++|||+
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 239 (337)
T 3v1y_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPT 239 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSC
T ss_pred HHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCC
Confidence 99999999999999999999999999999999987689999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 240 VDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 240 ~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
++||+.+++++|+++++.||++++++
T Consensus 240 ~~~s~~dlt~~lek~~t~eei~~~lk 265 (337)
T 3v1y_O 240 VDVSVVDLTVRIEKAASYDAIKSAIK 265 (337)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CCcEEEEEEEEECCCCcHHHHHHHHH
Confidence 99999999999999999999999873
No 2
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=4.4e-62 Score=428.81 Aligned_cols=261 Identities=66% Similarity=1.073 Sum_probs=248.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
|+||||+|||+||+.++|++.+++++|+++|+|+..+.++++|||+|||+||+|+ +++..+++ .|.++|+.+.++++.
T Consensus 1 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 1 MVRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVSHDDK-HIIVDGKKIATYQER 78 (332)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred CeEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEEeec
Confidence 4899999999999999999999999999999998778999999999999999999 88777665 799999999999888
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCCCceEEeeeccccccCCCCeEEcCCCchhhhHhH
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELNIVSNASCTTNCLAPL 162 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~~~~~v~~vn~~~~~~~~~~Va~p~C~~ta~~~~ 162 (265)
||++++|.+.++|+||+|||.+++++.++.++++|+|+++||+++.|+|++|||+|++.+++..++||||+|+|+|++++
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~ 158 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPL 158 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHH
Confidence 99999998889999999999999999999999999999999999888899999999999987678999999999999999
Q ss_pred HHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeCce
Q 024565 163 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242 (265)
Q Consensus 163 L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~~G 242 (265)
++||+++|||+++.+|++|++|++|+.+|++++++|+++|.+++|++|+.+|.++++.+++|+++++++.+++|||+++|
T Consensus 159 lkvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~ 238 (332)
T 3pym_A 159 AKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDV 238 (332)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSC
T ss_pred HHHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCc
Confidence 99999999999999999999999999999987789999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEecCCCCHHHHHHHhC
Q 024565 243 SVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 243 ~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|+.+++++|+++++.||++++++
T Consensus 239 s~~dlt~~lek~~t~eei~~~lk 261 (332)
T 3pym_A 239 SVVDLTVKLNKETTYDEIKKVVK 261 (332)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHH
T ss_pred EeeEEEEEECCcCCHHHHHHHHH
Confidence 99999999999999999999873
No 3
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=5.5e-61 Score=422.24 Aligned_cols=260 Identities=49% Similarity=0.770 Sum_probs=245.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
++||||+|||+||+.++|++.+++++|+++|+| ..+.++++|||+|||+||+|. +++..+++ .|.++|+.+.++++.
T Consensus 4 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind-~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~ 80 (338)
T 3lvf_P 4 AVKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDG-GFRVNGKEVKSFSEP 80 (338)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSCHHHHHHHHHCCTTTCCCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHHCCCceEEEEec-CCCHHHHHHHhccCCCCCCcC-CeEEEcCC-EEEECCEEEEEEEec
Confidence 589999999999999999999999999999999 458899999999999999999 88877766 799999999999888
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCC-CCceEEeeeccccccCCCCeEEcCCCchhhhHh
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEHEYKPELNIVSNASCTTNCLAP 161 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~-~~~~~v~~vn~~~~~~~~~~Va~p~C~~ta~~~ 161 (265)
||++++|.+.++|+||+|||.+++++.++.++++|+|+++||+++. ++|++|||+|++.+++..++||||+|+|+|+++
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap 160 (338)
T 3lvf_P 81 DASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAP 160 (338)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHHH
T ss_pred ccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhHH
Confidence 9999999888999999999999999999999999999999999865 689999999999998667899999999999999
Q ss_pred HHHHHHHhcCceEEEEEEEeeccccccccCCCCCC-cccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeC
Q 024565 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSK-DWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 162 ~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~-~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~ 240 (265)
+|+||+++|||+++.+||+|++|++|+.+|+++.+ +|+++|++++|++|+.+|.++++.+++||++++++.+++|||++
T Consensus 161 ~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 240 (338)
T 3lvf_P 161 VAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVA 240 (338)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEESCS
T ss_pred HHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcCCC
Confidence 99999999999999999999999999999987654 89999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEecC-CCCHHHHHHHhC
Q 024565 241 DVSVVDLTVRLEK-DASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~v~~~~-~~~~e~v~~~~~ 265 (265)
+||+.+++++|++ +++.||++++++
T Consensus 241 ~~s~~dlt~~lek~~~t~eei~~~lk 266 (338)
T 3lvf_P 241 TGSLTELTVVLEKQDVTVEQVNEAMK 266 (338)
T ss_dssp SCEEEEEEEEESSSSCCHHHHHHHHH
T ss_pred ceEEEEEEEEEccCCCCHHHHHHHHH
Confidence 9999999999999 999999999874
No 4
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=1.1e-60 Score=420.94 Aligned_cols=259 Identities=48% Similarity=0.824 Sum_probs=233.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
|+||||+|||+||+.++|++.+++++|+++|+|+ .+.++++|||+|||+||+|. +++..+++ .|.++|+.+.++++.
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFD-GTVEAFED-HLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEeecC
Confidence 6899999999999999999999999999999998 48899999999999999999 88777665 799999999999888
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCC-CCceEEeeeccccccC-CCCeEEcCCCchhhhH
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEHEYKP-ELNIVSNASCTTNCLA 160 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~-~~~~~v~~vn~~~~~~-~~~~Va~p~C~~ta~~ 160 (265)
||++++|.+.++|+||+|||.+++++.++.++++|+|+++||+++. ++|++|||+|++.+++ ..++||||+|+|+|++
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~La 160 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLA 160 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhH
Confidence 9999999888999999999999999999999999999999999865 5899999999999985 5789999999999999
Q ss_pred hHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeC
Q 024565 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 ~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~ 240 (265)
++++||+++|||+++.+|++|++|++|+.+|+++ .+|+++|++++|++|+.+|.++++.+++|+++++++.+++|||++
T Consensus 161 p~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 239 (345)
T 4dib_A 161 PVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTP 239 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCS
T ss_pred HHHHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCc
Confidence 9999999999999999999999999999999875 789999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 241 DVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
+||+.+++++|+++++.||++++++
T Consensus 240 ~~s~~dlt~~lek~~t~eei~~~lk 264 (345)
T 4dib_A 240 NVSLVDLVVDVKRDVTVEAINDAFK 264 (345)
T ss_dssp SEEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ccEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999873
No 5
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=1.7e-60 Score=419.19 Aligned_cols=259 Identities=49% Similarity=0.807 Sum_probs=244.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~--p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
++||||+|||+||+.++|++.++ +++|+++|+|+ .+.++++|||+|||+||+|. +++..+++ .|.++|+.+.+++
T Consensus 2 ~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~ 78 (335)
T 3doc_A 2 AVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFP-KEVEVAGD-TIDVGYGPIKVHA 78 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCCEECSS-EEESSSSEEEEEC
T ss_pred CEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCC-CeEEEecC-EEEECCEEEEEEe
Confidence 58999999999999999999987 78999999998 58999999999999999999 88776655 7999999999998
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCC-CceEEeeeccccccCCCCeEEcCCCchhhh
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKPELNIVSNASCTTNCL 159 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~-~~~~v~~vn~~~~~~~~~~Va~p~C~~ta~ 159 (265)
+.||++++|.+.++|+||+|||.+++++.++.++++|+|+++||+++.| +|++|||+|++.+++..++||||+|+|+++
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~L 158 (335)
T 3doc_A 79 VRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCL 158 (335)
T ss_dssp CSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred ecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhh
Confidence 8899999998889999999999999999999999999999999998655 699999999999987678999999999999
Q ss_pred HhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeee
Q 024565 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT 239 (265)
Q Consensus 160 ~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~ 239 (265)
+++++||+++|||+++.+|++|++|++|+.+|++ +++|+++|++++|++|+.+|.++++.+++|+++++++.+++|||+
T Consensus 159 ap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p-~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 237 (335)
T 3doc_A 159 APVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTM-HKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPT 237 (335)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCC-CSSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESC
T ss_pred HHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCc-cccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEecc
Confidence 9999999999999999999999999999999987 478999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 240 VDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 240 ~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
++||+.+++++|+++++.||++++++
T Consensus 238 ~~~s~~dlt~~lek~~t~eei~~~lk 263 (335)
T 3doc_A 238 PNVSVVDLTFIAKRETTVEEVNNAIR 263 (335)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ccccceEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999873
No 6
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=2.5e-60 Score=419.80 Aligned_cols=260 Identities=64% Similarity=1.066 Sum_probs=247.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
|+||||+|+|+||+.++|++.+++ +|+++|+|+..+.++++|||+|||+||+|. +++..+++ .|.++|+.+.++++.
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNG-QLVVDNHEISVYQCK 83 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCC-CcEEEcCC-EEEECCEEEEEEecC
Confidence 689999999999999999999887 999999998778999999999999999999 88877665 799999999999888
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCCCceEEeeeccccccC-CCCeEEcCCCchhhhHh
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKP-ELNIVSNASCTTNCLAP 161 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~~~~~v~~vn~~~~~~-~~~~Va~p~C~~ta~~~ 161 (265)
||++++|.+.++|+||+|||.+++++.++.++++|+|++|||+++.|+|++|||+|++.+++ ..++||||+|+|+|+++
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap 163 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAP 163 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHH
Confidence 99999998889999999999999999999999999999999999888999999999999986 57899999999999999
Q ss_pred HHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeCc
Q 024565 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 241 (265)
Q Consensus 162 ~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~~ 241 (265)
+++||+++|||+++.+||+|++|++|+.+|++++++|+++|++++|++|+.+|.++++.+++|+++++++.+++|||+++
T Consensus 164 ~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~ 243 (346)
T 3h9e_O 164 LAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPD 243 (346)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEccccc
Confidence 99999999999999999999999999999998778999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEEecCCCCHHHHHHHhC
Q 024565 242 VSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 242 G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
||+.+++++|+++++.||++++++
T Consensus 244 ~s~~dlt~~lek~~t~eei~~~lk 267 (346)
T 3h9e_O 244 VSVVDLTCRLAQPAPYSAIKEAVK 267 (346)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ceeEEEEEEECCcCCHHHHHHHHH
Confidence 999999999999999999999873
No 7
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=1.5e-60 Score=421.94 Aligned_cols=262 Identities=57% Similarity=0.946 Sum_probs=246.1
Q ss_pred ccEEEEEccChhHHHHHHH----HHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeee-------CCceEEE
Q 024565 3 KVKIGINGFGRIGRLVARV----ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVK-------DDKTLLF 71 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~----L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~ 71 (265)
++||||+|||+||+.++|+ +.+++++|+++|+|+..+.++++|||+|||+||+|. +++... .++.|.+
T Consensus 2 ~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 2 PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCCEEEE
T ss_pred ceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCCEEEE
Confidence 5899999999999999999 677889999999997778999999999999999999 888762 4458999
Q ss_pred CCEEEEEEe-cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCC-CCceEEeeeccccccC-CCCe
Q 024565 72 GEKPVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEHEYKP-ELNI 148 (265)
Q Consensus 72 ~g~~~~~~~-~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~-~~~~~v~~vn~~~~~~-~~~~ 148 (265)
+|+.+.+++ +.+|++++|.+.++|+||+|||.+++++.++.++++|+|+|+||+++. |+|++|||+|++.+++ ..++
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~I 160 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHV 160 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCSE
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCCE
Confidence 999999987 789999999888999999999999999999999999999999999865 7899999999999986 5789
Q ss_pred EEcCCCchhhhHhHHHHH-HHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCC
Q 024565 149 VSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALN 227 (265)
Q Consensus 149 Va~p~C~~ta~~~~L~pL-~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~ 227 (265)
||||+|+|+|++++++|| +++|||+++.+||+|++|++|+.+|+++.++|+++|++++|++|+.+|.++++.+++||++
T Consensus 161 ISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~ 240 (359)
T 3ids_C 161 VSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQ 240 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGGT
T ss_pred EECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhhc
Confidence 999999999999999999 9999999999999999999999999986679999999999999999999999999999999
Q ss_pred CceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 228 GKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 228 ~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
++++.+++|||+++||+.+++++|+++++.||++++++
T Consensus 241 gkltg~avRVPv~~vs~~dlt~~lek~~t~eei~~~lk 278 (359)
T 3ids_C 241 GKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALK 278 (359)
T ss_dssp TSEEEEEEEESCSSCEEEEEEEECSSCCCHHHHHHHHH
T ss_pred CceEEEEEEcCCCCcEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999873
No 8
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=2e-59 Score=415.29 Aligned_cols=263 Identities=63% Similarity=1.020 Sum_probs=244.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|.++||||+|+|+||+.++|++.++|++|+++|+++..+.++++|+++|||+||+|. +.+..+++ .|.++|+.+.+++
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~-~~v~~~~~-~l~v~Gk~i~v~~ 86 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFP-CEVTHADG-FLLIGEKKVSVFA 86 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEESSCEEEEEC
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCC-CCEEEcCC-EEEECCEEEEEEE
Confidence 678999999999999999999999999999999996668999999999999999998 77777655 7999999999987
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCC-CceEEeeeccccccCCCCeEEcCCCchhhh
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKPELNIVSNASCTTNCL 159 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~-~~~~v~~vn~~~~~~~~~~Va~p~C~~ta~ 159 (265)
..||++++|.+.++|+||+|||.+.+++.++.++++|+|++|||+++.+ +|++|||+|++.+++..++||||+|+|+++
T Consensus 87 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~L 166 (345)
T 2b4r_O 87 EKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCL 166 (345)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred cCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHH
Confidence 6789999997779999999999999999999999999999999988654 799999999999986568999999999999
Q ss_pred HhHHHHHHHhcCceEEEEEEEeeccccccccCCCC--CCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEe
Q 024565 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS--SKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237 (265)
Q Consensus 160 ~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~--~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~v 237 (265)
+++|+||+++|||+++.+||+|++||+|+.+|++. +.+|+++|++++|++|+.+|.++++.+++|+++++++.+++||
T Consensus 167 ap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRV 246 (345)
T 2b4r_O 167 APLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRV 246 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEEC
T ss_pred HHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEe
Confidence 99999999999999999999999999999999875 2689999999999999999999999999999999999999999
Q ss_pred eeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 238 PTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 238 P~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|+++||+.+++++|+++++.|||+++|+
T Consensus 247 Pv~~gs~~dltv~lek~~t~eei~~~lk 274 (345)
T 2b4r_O 247 PIGTVSVVDLVCRLQKPAKYEEVALEIK 274 (345)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999874
No 9
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=3.1e-59 Score=417.78 Aligned_cols=263 Identities=69% Similarity=1.116 Sum_probs=241.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|||+||||+|+|++|++++|+|.+||++|+++|+++..+.+.++|+++||++||+|. +.+...++ .+.++|+.+.++.
T Consensus 1 mM~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~-~~~~~~~~-~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFH-GTVKAENG-KLVINGNPITIFQ 78 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEEC
T ss_pred CCceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCC-CceEEcCC-eEEECCeEEEEEe
Confidence 777999999999999999999999999999999996347788899999999999998 66555444 6889999999887
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCCCceEEeeeccccccCCCCeEEcCCCchhhhH
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELNIVSNASCTTNCLA 160 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~~~~~v~~vn~~~~~~~~~~Va~p~C~~ta~~ 160 (265)
..|+++++|...++|+||+|||++.+.+.+++++++|+|++++|+++++.|++|||+|++++++.+++||||||+|||++
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~ 158 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLA 158 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHH
Confidence 67899999977789999999999999999999999999989999997778999999999999854789999999999999
Q ss_pred hHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeC
Q 024565 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 ~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~ 240 (265)
|+|+||+++|||+++.++++|++||+++.+|++...+++++|.+++|++|+..|+++|+.+++||++++++++++|||++
T Consensus 159 ~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 238 (335)
T 1u8f_O 159 PLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTA 238 (335)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCS
T ss_pred HHHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccC
Confidence 99999999999999999999999999999898643589999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 241 DVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|||+.+++++|+++++.|||+++|+
T Consensus 239 ~g~~~~l~~~l~~~~t~eei~~~~~ 263 (335)
T 1u8f_O 239 NVSVVDLTCRLEKPAKYDDIKKVVK 263 (335)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CEEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999874
No 10
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=5.1e-59 Score=414.55 Aligned_cols=259 Identities=64% Similarity=1.031 Sum_probs=240.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
|+||||+|+||+|++++|+|.+||++|+++|++.. +...++||++||++||+|. +.+..+++ .+.++|+.+.+++..
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~-~~~~~a~l~~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~ 77 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLL-DADYMAYMLKYDSTHGRFD-GTVEVKDG-HLIVNGKKIRVTAER 77 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSS-CHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCC-ChhHHhHhhcccccCCCCC-CeEEEcCC-EEEECCEEEEEEEcC
Confidence 48999999999999999999999999999999964 6788999999999999998 76655544 689999999998777
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCC-CCceEEeeeccccccCCCCeEEcCCCchhhhHh
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEHEYKPELNIVSNASCTTNCLAP 161 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~-~~~~~v~~vn~~~~~~~~~~Va~p~C~~ta~~~ 161 (265)
||++++|...++|+||+|||++.+++.++.++++|+|++++|++.+ +.|++|||+|+++++ .+++||||||++||++|
T Consensus 78 dp~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap 156 (330)
T 1gad_O 78 DPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAP 156 (330)
T ss_dssp SGGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHH
T ss_pred ChhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHH
Confidence 8999999777899999999999999999999999999898999864 478999999999998 58999999999999999
Q ss_pred HHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeCc
Q 024565 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 241 (265)
Q Consensus 162 ~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~~ 241 (265)
+|+||+++|||+++.++++|++||++..+|++...+++++|.+++|++|+..++++|+.+++|+++++++++|+|||++|
T Consensus 157 ~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~ 236 (330)
T 1gad_O 157 LAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPN 236 (330)
T ss_dssp HHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSS
T ss_pred HHHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEecccc
Confidence 99999999999999999999999999999987546899999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEEecCCCCHHHHHHHhC
Q 024565 242 VSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 242 G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
||+.+++++++++++.|||+++|+
T Consensus 237 g~~~~l~~~l~k~~t~eei~~~~k 260 (330)
T 1gad_O 237 VSVVDLTVRLEKAATYEQIKAAVK 260 (330)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999874
No 11
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=1.3e-58 Score=412.37 Aligned_cols=259 Identities=55% Similarity=0.875 Sum_probs=239.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
|+||||+|+||+|++++|+|.+||++|+++|++. .+.+.++|+++||++||+|. +++...++ .+.++|+.+.++++.
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~ 77 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLD-AEVSVNGN-NLVVNGKEIIVKAER 77 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcC-ceEEEccC-cEEECCEEEEEEecC
Confidence 4899999999999999999999999999999996 37788999999999999998 77665554 788999999888667
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCC-CceEEeeeccccccC-CCCeEEcCCCchhhhH
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKP-ELNIVSNASCTTNCLA 160 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~-~~~~v~~vn~~~~~~-~~~~Va~p~C~~ta~~ 160 (265)
|+++++|.+.++|+||+|||++.+++.++.++++|+|++|||++.+| .|++|||+|++++++ ..++||||||+|||++
T Consensus 78 dp~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~la 157 (334)
T 3cmc_O 78 DPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLA 157 (334)
T ss_dssp SGGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHH
Confidence 89999997778999999999999999999999999999999777555 689999999999984 3689999999999999
Q ss_pred hHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeC
Q 024565 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 ~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~ 240 (265)
|+|+||+++|||+++.++++|++||+++.+|++ +.+++++|.+++|++|+.+|+++|+.+++|+++++++++|+|||++
T Consensus 158 p~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~-~~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~ 236 (334)
T 3cmc_O 158 PFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLP-HKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTP 236 (334)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCceeeeEEEEEeccchhhhcccc-ccccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCC
Confidence 999999999999999999999999999999986 5789999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 241 DVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|||+.+++++++++++.|||+++|+
T Consensus 237 ~gs~~~l~~~l~k~~t~eei~~~lk 261 (334)
T 3cmc_O 237 NVSVVDLVAELEKEVTVEEVNAALK 261 (334)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CEEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999874
No 12
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=2.3e-58 Score=407.96 Aligned_cols=259 Identities=44% Similarity=0.743 Sum_probs=242.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcC---CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~---p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+||||+|||+||+.++|+|.++ |++|+++|++. .+.++++||++||++||+|. +.+..+++ .|.++|+.+.++
T Consensus 1 ~ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~-~~v~~~~~-~l~v~g~~i~v~ 77 (335)
T 1obf_O 1 TIRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFP-GTVSVNGS-YMVVNGDKIRVD 77 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCC-CCEEEeCC-EEEECCEEEEEE
Confidence 37999999999999999999998 89999999996 47889999999999999999 77777654 799999999998
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCC-CCc-eEEeeeccccccCCCCeEEcCCCchh
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAP-MFVVGVNEHEYKPELNIVSNASCTTN 157 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~-~~~-~~v~~vn~~~~~~~~~~Va~p~C~~t 157 (265)
+..||++++|.+.++|+||+|||.+.+++.++.++++|+|++++|+++. |+| ++|||+|++.+++..++||||+|+|+
T Consensus 78 ~~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn 157 (335)
T 1obf_O 78 ANRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTN 157 (335)
T ss_dssp CCSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred EcCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHH
Confidence 7778999999878999999999999999999999999999999998865 688 99999999999865689999999999
Q ss_pred hhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEe
Q 024565 158 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237 (265)
Q Consensus 158 a~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~v 237 (265)
+++++|+||+++|||+++.+||+|++||+|..+|++ +.+|+++|++++|++|+.+|.++++.+++|+++++++.+++||
T Consensus 158 ~Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~-~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRV 236 (335)
T 1obf_O 158 CLAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVY-HEDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRV 236 (335)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCC-CSSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEE
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhccc-ccccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEe
Confidence 999999999999999999999999999999999987 4689999999999999999999999999999999999999999
Q ss_pred eeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 238 PTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 238 P~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|+++||+.+++++|+++++.||++++|+
T Consensus 237 Pv~~~s~~dl~v~lek~~t~eei~~~lk 264 (335)
T 1obf_O 237 PTINVSIVDLSFVAKRNTTVEEVNGILK 264 (335)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred eccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999874
No 13
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=1.6e-58 Score=409.49 Aligned_cols=259 Identities=50% Similarity=0.874 Sum_probs=242.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
++||||+|||+||+.++|+|.++|++++++|++. .+.++++|+++||++||+|. +.+..+++ .|.++|+.+.++++.
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~-~~v~~~~~-~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFK-GSVEAKDD-SIVVDGKEIKVFAQK 78 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCC-CcEEEcCC-EEEECCEEEEEEEcC
Confidence 4899999999999999999999999999999994 47899999999999999998 77776644 799999999998777
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCCCc-eEEeeeccccccC-CCCeEEcCCCchhhhH
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNEHEYKP-ELNIVSNASCTTNCLA 160 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~~~-~~v~~vn~~~~~~-~~~~Va~p~C~~ta~~ 160 (265)
+|++++|.+.++|+||+|||.+.+++.++.++++|+|++++|++++|.| ++|||+|++.+++ ..++||||+|+|++++
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~La 158 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLA 158 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHH
Confidence 8999999777999999999999999999999999999999999988899 9999999999985 4689999999999999
Q ss_pred hHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeC
Q 024565 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 ~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~ 240 (265)
++|+||+++|||+++.+||+|++|++|..+|++ +.+|+.+|++++|++|+.+|.++++.+++|+++++++.+++|||++
T Consensus 159 p~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p-~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~ 237 (342)
T 2ep7_A 159 PCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLP-HKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVP 237 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHHcCeeEEEEEEEeecccchhhhcCC-cchhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEeccc
Confidence 999999999999999999999999999999987 5789999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEecC-CCCHHHHHHHhC
Q 024565 241 DVSVVDLTVRLEK-DASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~v~~~~-~~~~e~v~~~~~ 265 (265)
+||+.+++++|++ +++.|||+++|+
T Consensus 238 ~~s~~dltv~lek~~~t~eei~~~lk 263 (342)
T 2ep7_A 238 DGSLIDLTVVVNKAPSSVEEVNEKFR 263 (342)
T ss_dssp SCEEEEEEEEESSCCSCHHHHHHHHH
T ss_pred ceEEEEEEEEEcCCCCCHHHHHHHHH
Confidence 9999999999999 999999999874
No 14
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.6e-58 Score=409.11 Aligned_cols=258 Identities=51% Similarity=0.859 Sum_probs=238.5
Q ss_pred cEEEEEccChhHHHHHHHHHcC--CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~--p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
+||||+|+||+|++++|+|.+| |++|+++|++.. +.+.++|+++||++||+|. +.+..+++ .|.++|+.+.++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~-~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLT-DTKTLAHLLKYDSVHKKFP-GKVEYTEN-SLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSS-CHHHHHHHHHCCTTTCCCS-SCEEECSS-EEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCC-ChHHhhhhccCcCcCCCcC-CcEEEcCC-EEEECCeEEEEEec
Confidence 5899999999999999999999 999999999953 7889999999999999998 67665544 78899998988766
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCCCc-eEEeeeccccccCCCCeEEcCCCchhhhH
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNEHEYKPELNIVSNASCTTNCLA 160 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~~~-~~v~~vn~~~~~~~~~~Va~p~C~~ta~~ 160 (265)
.|+++++|.+.++|+||+|||++.+++.++.++++|+|++|||++.++.| ++|||+|++++++++++||||||+|||++
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~la 157 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIA 157 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHH
Confidence 78999999766899999999999999999999999999999988766788 99999999999844789999999999999
Q ss_pred hHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeC
Q 024565 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 ~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~ 240 (265)
|+|+||+++|||+++.++++|++||+++.+|++ +.+++++|.+++|++|+.+|+++|+.+++|+++++++++|+|||++
T Consensus 158 p~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~-~~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~ 236 (332)
T 1hdg_O 158 PIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLP-HKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTP 236 (332)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCeeEeEEEEEEeccchhhhhcCc-ccccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEcccc
Confidence 999999999999999999999999999999986 4689999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 241 DVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|||+.+++++++++++.|||+++|+
T Consensus 237 ~g~l~~l~~~l~k~~t~eei~~~lk 261 (332)
T 1hdg_O 237 DGSITDLTVLVEKETTVEEVNAVMK 261 (332)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CcEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999874
No 15
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=5.9e-58 Score=409.08 Aligned_cols=265 Identities=88% Similarity=1.344 Sum_probs=238.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|||+||||+|+|++|++++|+|.+||++|+++|+++..+.+.++|+++||++||+|..+.+....++.+.++|+.+.++.
T Consensus 1 mm~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred CCceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 66789999999999999999999999999999999644777888999999999998512222213336889999888877
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCCCceEEeeeccccccCCCCeEEcCCCchhhhH
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELNIVSNASCTTNCLA 160 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~~~~~v~~vn~~~~~~~~~~Va~p~C~~ta~~ 160 (265)
..|+++++|...++|+||+|||++.+.+.++.++++|+|++|||++.+|.|++|||+|++++++.+++||||||++||++
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la 160 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLA 160 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHH
Confidence 66899999977789999999999999999999999999999998887778999999999999854789999999999999
Q ss_pred hHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeC
Q 024565 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240 (265)
Q Consensus 161 ~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~ 240 (265)
|+|+||+++|||+++.++++|++||++..+|++...+++.+|.+++|++|+..++++|+.+++||++++++++++|||++
T Consensus 161 ~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 240 (337)
T 3e5r_O 161 PLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEeccC
Confidence 99999999999999999999999999999998743578889999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 241 DVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 241 ~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|||+.+++++|+++++.|||+++|+
T Consensus 241 ~g~~~~l~~~l~k~~t~eei~~~~~ 265 (337)
T 3e5r_O 241 DVSVVDLTVRIEKAASYDAIKSAIK 265 (337)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CeEEEEEEEEECCCccHHHHHHHHH
Confidence 9999999999999999999999874
No 16
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=3.8e-58 Score=410.87 Aligned_cols=263 Identities=66% Similarity=1.055 Sum_probs=237.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+|+||||+|+|++|++++|+|.+||++|+++|+++..+...++|+++||++||+|. +.+..+++ .+.++|+.+.+++
T Consensus 15 ~~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~-~~v~~~~~-~l~v~g~~i~v~~ 92 (354)
T 3cps_A 15 YFQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFN-GTVEVSGK-DLCINGKVVKVFQ 92 (354)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCS-SCEEECC--CEEETTEEEEEEC
T ss_pred CcceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCC-CcEEEeCC-EEEECCeEEEEEe
Confidence 357899999999999999999999999999999995557888899999999999998 76655544 6889999998887
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCC-CceEEeeeccccccCC-CCeEEcCCCchhh
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKPE-LNIVSNASCTTNC 158 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~-~~~~v~~vn~~~~~~~-~~~Va~p~C~~ta 158 (265)
..||++++|.+.++|+||+|||++.+++.++.++++|+|++|||++.++ .|++|||+|++++++. .++||||||++||
T Consensus 93 ~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~ 172 (354)
T 3cps_A 93 AKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNC 172 (354)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHH
Confidence 6789999997678999999999999999999999999999999777544 7899999999999853 6899999999999
Q ss_pred hHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCC--CcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEE
Q 024565 159 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSS--KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFR 236 (265)
Q Consensus 159 ~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~--~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~ 236 (265)
++|+|+||+++|||+++.+|++|++||++..+|++.. .+++.+|.+++|++|+..|+++|+.+++|+++++++++++|
T Consensus 173 lap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~r 252 (354)
T 3cps_A 173 LAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIR 252 (354)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEE
T ss_pred HHHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEE
Confidence 9999999999999999999999999999999998631 56777889999999999999999999999999999999999
Q ss_pred eeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 237 VPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 237 vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
||++|||+.+++++|+++++.|||+++|+
T Consensus 253 VP~~~gs~~dl~~~l~k~~t~eeI~~~~k 281 (354)
T 3cps_A 253 VPTPDVSVVDLTCKLAKPASIEEIYQAVK 281 (354)
T ss_dssp ESCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred eccCCEEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999874
No 17
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=2e-58 Score=408.02 Aligned_cols=258 Identities=48% Similarity=0.833 Sum_probs=242.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
++||||+|||+||+.++|+|.++ ++++++|++. .+.++++|+|+|||+||+|. ++++.+++ .|.++|+.+.+++..
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl-~d~~~~a~llkydS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~~~ 96 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFER-GIDIVAINDL-TDPKTLAHLLKYDSTFGVYN-KKVESRDG-AIVVDGREIKIIAER 96 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCHHHhhhhhccccCCCCCC-CCEEEcCC-EEEECCEEEEEEEcC
Confidence 58999999999999999999998 7999999998 48899999999999999998 77665554 899999999999878
Q ss_pred CCCCCCcccccccEEEEecCCccc----HHhHHHHHh-CCCCeEEEcCCCCC-CceEEeeeccccccCCCCeEEcCCCch
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLK-GGAKKVIISAPSKD-APMFVVGVNEHEYKPELNIVSNASCTT 156 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~----~~~~~~~~~-~G~~~vvis~~~~~-~~~~v~~vn~~~~~~~~~~Va~p~C~~ 156 (265)
||++++|.+.++|+||+|||.+.+ ++.++.+++ +|+|+||||+++.| +|++|||+|++.+++..++||||+|++
T Consensus 97 dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCTT 176 (356)
T 3hja_A 97 DPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTT 176 (356)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHHH
T ss_pred ChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccch
Confidence 999999988899999999999999 999999999 99999999988654 699999999999987678999999999
Q ss_pred hhhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEE
Q 024565 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFR 236 (265)
Q Consensus 157 ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~ 236 (265)
++++++|+||+++|||+++.+|++|++|++|+.+|+|+ ++|+++|.+++|++|+.+|.++++.+++|+++++++.+++|
T Consensus 177 n~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avR 255 (356)
T 3hja_A 177 NCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMR 255 (356)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEEE
T ss_pred hhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEEE
Confidence 99999999999999999999999999999999999875 79999999999999999999999999999999999999999
Q ss_pred eeeCceEEEEEEEEe-cCCCCHHHHHHHhC
Q 024565 237 VPTVDVSVVDLTVRL-EKDASYDEIKAAIK 265 (265)
Q Consensus 237 vP~~~G~~~~~~v~~-~~~~~~e~v~~~~~ 265 (265)
||+++||+.+++++| +++++.|||+++|+
T Consensus 256 VPv~~~s~~dlt~~l~ek~~t~eeI~~~lk 285 (356)
T 3hja_A 256 VPVPTGSIVDLTVQLKKKDVTKEEINSVLR 285 (356)
T ss_dssp ESCSSCEEEEEEEEESCTTCCHHHHHHHHH
T ss_pred cCCCccEeEEEEEEEccCCCCHHHHHHHHH
Confidence 999999999999999 99999999999874
No 18
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=5.8e-57 Score=401.16 Aligned_cols=260 Identities=49% Similarity=0.804 Sum_probs=238.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~--p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+||||+|+|++|++++|+|.+| |++|+++|+|. .+.++++|+++||+.||+|. +.+....++.+.++|+.+.++.
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~-~~v~~~~~~~l~v~g~~i~v~~ 78 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFD-ADVKTAGDSAISVDGKVIKVVS 78 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCS-SCEEECTTSEEEETTEEEEEEC
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCcc-ceeEEecCCeEEECCeEEEEEe
Confidence 48999999999999999999999 99999999995 48899999999999999998 6655222336889999999988
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCC-CceEEeeeccccccCCCCeEEcCCCchhhh
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKPELNIVSNASCTTNCL 159 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~-~~~~v~~vn~~~~~~~~~~Va~p~C~~ta~ 159 (265)
..|+++++|.+.++|+||+|||++.+++.++.++++|+|++++|++..+ .|++|||+|++.+++..++||||||+|+|+
T Consensus 79 ~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~l 158 (337)
T 1rm4_O 79 DRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCL 158 (337)
T ss_dssp CSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHH
T ss_pred cCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHH
Confidence 7889999996568999999999999999999999999999999998544 789999999999985478999999999999
Q ss_pred HhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeee
Q 024565 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT 239 (265)
Q Consensus 160 ~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~ 239 (265)
+|+|+||+++|||+++.+|++|++||++++.|++ +.+|+.+|.+++|++|+..+..+.+.+++||++++++++++|||+
T Consensus 159 ap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~-~~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~ 237 (337)
T 1rm4_O 159 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDAS-HRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 237 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCC-CSSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHhcCeeEEEEEEEEecCCccchhhcc-hhhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecC
Confidence 9999999999999999999999999998888875 578999999999999999998889999999999999999999999
Q ss_pred CceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 240 VDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 240 ~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
++||+.+++++++++++.|||+++|+
T Consensus 238 ~~gs~~dl~~~l~k~~t~eei~~~lk 263 (337)
T 1rm4_O 238 PNVSVVDLVVQVSKKTFAEEVNAAFR 263 (337)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CCEEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999874
No 19
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=1.3e-56 Score=403.35 Aligned_cols=259 Identities=45% Similarity=0.800 Sum_probs=239.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~--p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+||||+|+|++|++++|+|.+| |++|+++|++. .+.++++|+++||++||+|. +.+..+++ .|.++|+.+.++.
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~ 78 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIVC 78 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEEC
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCC-CcEEEeCC-eEEECCeEEEEEe
Confidence 58999999999999999999999 99999999996 37889999999999999998 77666555 6889999999887
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCC-Cc-eEEeeeccccccC-CCCeEEcCCCchh
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNEHEYKP-ELNIVSNASCTTN 157 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~-~~-~~v~~vn~~~~~~-~~~~Va~p~C~~t 157 (265)
..||++++|.+.++|+||+|||++.+++.++.++++|+|+||||+...+ .| ++|||+|++.+++ ..++||||||+|+
T Consensus 79 ~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn 158 (380)
T 2d2i_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (380)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHH
Confidence 7789999997668999999999999999999999999999999887555 67 9999999999986 3589999999999
Q ss_pred hhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEe
Q 024565 158 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237 (265)
Q Consensus 158 a~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~v 237 (265)
|++|+|+||+++|||+++.+|++|++||+++++|++ +.+|+.+|.+++|++|+.+++++.+++++||++++++++++||
T Consensus 159 ~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~-~~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRV 237 (380)
T 2d2i_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDAS-HRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRV 237 (380)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCC-CSSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccc-hhhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEe
Confidence 999999999999999999999999999999999987 4789999999999999999999999999999999999999999
Q ss_pred eeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 238 PTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 238 P~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|+++||+.+++++|+++++.|||+++|+
T Consensus 238 Pt~~gs~~dlt~~l~k~~t~eeI~~~lk 265 (380)
T 2d2i_A 238 PTPNVSVVDLVVQVEKPTITEQVNEVLQ 265 (380)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ccCCEEEEEEEEEECCcCCHHHHHHHHH
Confidence 9999999999999999999999999874
No 20
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=1.1e-56 Score=398.69 Aligned_cols=257 Identities=51% Similarity=0.813 Sum_probs=238.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecCC
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 83 (265)
+||||+|+|++|++++|+|.+| ++++++|++. .+.++++|+++||++||+|. +++...++ .+.++|+.+.+++..|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFP-GEVAYDDQ-YLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCC-ceEEEcCC-EEEECCEEEEEEecCC
Confidence 5899999999999999999999 8999999995 48899999999999999998 77665544 7889999999886668
Q ss_pred CCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCC-CceEEeeeccccccC-CCCeEEcCCCchhhhHh
Q 024565 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKP-ELNIVSNASCTTNCLAP 161 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~-~~~~v~~vn~~~~~~-~~~~Va~p~C~~ta~~~ 161 (265)
|++++|.+.++|+||+|||.+.+++.++.++++|+|++|||+++.+ .|++|||+|++.+++ ..++|+||||+|+|++|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 9999997778999999999999999999999999999999888655 789999999999985 36899999999999999
Q ss_pred HHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEeeeCc
Q 024565 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVD 241 (265)
Q Consensus 162 ~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~vP~~~ 241 (265)
+|+||+++|||+++.+|++|++||+|+.+|++ +.+|+++|.+++|++|+..|..+++.+++|+++++++++++|||+++
T Consensus 157 ~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~-~~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~ 235 (331)
T 2g82_O 157 VMKVLEEAFGVEKALMTTVHSYTNDQRLLDLP-HKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTAT 235 (331)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHHhcCccEEEEEEEeecccccchhccc-cccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCC
Confidence 99999999999999999999999999999976 57899999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEEecCCCCHHHHHHHhC
Q 024565 242 VSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 242 G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
||+.+++++|+++++.|||+++|+
T Consensus 236 gs~~dl~v~l~k~~t~eei~~~lk 259 (331)
T 2g82_O 236 GSISDITALLKREVTAEEVNAALK 259 (331)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999874
No 21
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=7e-56 Score=395.41 Aligned_cols=259 Identities=45% Similarity=0.800 Sum_probs=239.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~--p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+||||+|+|++|++++|+|.+| |++|+++|++.. +.++++|+++||++||+|. +.+..+++ .+.++|+.+.++.
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~-~~~~~~~l~~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~ 78 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTS-DARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIVC 78 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSS-CHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEEC
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCC-CHHHHHHHhccccccCCCC-CcEEEcCC-eeeecCceEEEEe
Confidence 58999999999999999999999 999999999873 7889999999999999998 77665554 6889999898887
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCC-Cc-eEEeeeccccccC-CCCeEEcCCCchh
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNEHEYKP-ELNIVSNASCTTN 157 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~-~~-~~v~~vn~~~~~~-~~~~Va~p~C~~t 157 (265)
..||++++|.+.++|+||+|||++.+++.++.++++|+|+||||+++.+ .| ++|||+|++.+++ ..++||||||+|+
T Consensus 79 ~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn 158 (339)
T 3b1j_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (339)
T ss_dssp CSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhh
Confidence 7789999997678999999999999999999999999999999877555 67 9999999999985 3689999999999
Q ss_pred hhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEe
Q 024565 158 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237 (265)
Q Consensus 158 a~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~v 237 (265)
|++|+|+||+++|||+++.++++|++||+++.+|++ +.+|+.+|.+++|++|+.+++.+.+.+++|+++++++++++||
T Consensus 159 ~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~-~~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rV 237 (339)
T 3b1j_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDAS-HRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRV 237 (339)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCC-CSSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccc-hhhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEe
Confidence 999999999999999999999999999999999987 4689999999999999999999999999999999999999999
Q ss_pred eeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 238 PTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 238 P~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|+++||+.+++++|+++++.|||+++|+
T Consensus 238 P~~~g~~~dl~v~l~k~~t~eeI~~~lk 265 (339)
T 3b1j_A 238 PTPNVSVVDLVVQVEKPTITEQVNEVLQ 265 (339)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ccCCEEEEEEEEEEcCcCCHHHHHHHHH
Confidence 9999999999999999999999999874
No 22
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=3.2e-56 Score=397.91 Aligned_cols=259 Identities=38% Similarity=0.702 Sum_probs=228.6
Q ss_pred ccEEEEEccChhHHHHHHHHHc---CCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~---~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
++||||+|+|++|++++|+|.+ ||++|+++|++. .+.+.++|+++||++||+|. +++..+++ .+.++|+.+.++
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~ 78 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFA-WEVRQERD-QLFVGDDAIRVL 78 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEE
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCC-ceEEEcCC-eeEECCEEEEEE
Confidence 5899999999999999999999 999999999986 37788999999999999998 66665544 788999988887
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCC-CCCc-eEEeeeccccccCCCCeEEcCCCchh
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAP-MFVVGVNEHEYKPELNIVSNASCTTN 157 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~-~~~~-~~v~~vn~~~~~~~~~~Va~p~C~~t 157 (265)
+..||++++|.+.++|+||+|||++.+++.++.++++|+|++|||++. .|.| ++|||+|++++++..++||||||+||
T Consensus 79 ~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn 158 (339)
T 2x5j_O 79 HERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTN 158 (339)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHH
Confidence 667888899965589999999999999999999999999999997764 5677 99999999999854689999999999
Q ss_pred hhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCCCCceeEEEEEe
Q 024565 158 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237 (265)
Q Consensus 158 a~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~~~~v~~~~~~v 237 (265)
|++|+|+||+++|||+++.++++|++||+++.+|++ +.+|+++|.+++|++|+.+|+++++.+++|+++++++++++||
T Consensus 159 ~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~-~~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rV 237 (339)
T 2x5j_O 159 CIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAY-HPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRV 237 (339)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEEC
T ss_pred HHHHHHHHHHHccCcceeeEEEEEeccccccccccc-cccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEe
Confidence 999999999999999999999999999999888875 4678999999999999999999999999999999999999999
Q ss_pred eeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 238 PTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 238 P~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|+++||+.+++++++++++.|||+++|+
T Consensus 238 P~~~g~~~~l~v~l~k~~t~eei~~~lk 265 (339)
T 2x5j_O 238 PTINVTAIDLSVTVKKPVKANEVNLLLQ 265 (339)
T ss_dssp SSCSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cccCcEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999874
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=5.6e-45 Score=326.17 Aligned_cols=235 Identities=22% Similarity=0.253 Sum_probs=199.9
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeec--ccCCcc--cccce-eeeCCceEEECCEEE
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQW--KHHEL-KVKDDKTLLFGEKPV 76 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~-~~~~~~~l~~~g~~~ 76 (265)
||+||||+|+|++|+.++|+|.+||++++++|++. +.++.+|+++|| ++|++| . +.+ ...++ .+.+++
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~~-~l~v~~--- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDN-ERVKLFEDA-GIPVEG--- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCH-HHHHHHHHT-TCCCCC---
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCC-ceeecccCC-eEEECC---
Confidence 15899999999999999999999999999999996 367778899999 989988 3 222 11111 232222
Q ss_pred EEEecCCCCCCCcccccccEEEEecCCcccHHhHH-HHHhCCCCeEEEcCCCC-C-Cc-eEEeeeccccccCCCCeEEcC
Q 024565 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAA-AHLKGGAKKVIISAPSK-D-AP-MFVVGVNEHEYKPELNIVSNA 152 (265)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~-~~~~~G~~~vvis~~~~-~-~~-~~v~~vn~~~~~~~~~~Va~p 152 (265)
+++++.| ++|+||+|||.+.+.+.++ .++++|+ +|++|++.. + .| ++|||+|++++++ .++|+||
T Consensus 74 ------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG~-~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn~ 142 (343)
T 2yyy_A 74 ------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHKV-KAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRVV 142 (343)
T ss_dssp ------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTTC-EEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEEC
T ss_pred ------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCCC-EEEECCCccccCCCceEEcccCHHHhcc-CCEEecc
Confidence 3444433 7999999999999999996 9999996 466777754 4 78 9999999999985 7899999
Q ss_pred CCchhhhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeec----CCChhhHHHhhccCCCC
Q 024565 153 SCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNG 228 (265)
Q Consensus 153 ~C~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~----~~~~~~~~~~~l~e~~~ 228 (265)
+|++++++++|+||+++|||+++.++++|++||.+ +.+|.+++|++|+ .+|+++++.+++|++++
T Consensus 143 sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~~-----------~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~g 211 (343)
T 2yyy_A 143 SCNTTGLCRILYAINSIADIKKARIVLVRRAADPN-----------DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEG 211 (343)
T ss_dssp CHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCTT-----------CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTT
T ss_pred chhhHHHHHHHHHHHHHcCceEEEEEeeeeccCcC-----------cchhhHHhcccCCCCCCCCcchHHHHHhhhcccc
Confidence 99999999999999999999999999999999721 3456899999999 88999999999999999
Q ss_pred ceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 229 KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 229 ~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
+++.+++|||+++||+.+++++|+++++.||++++|+
T Consensus 212 kl~~~avRVPv~~gh~~~l~v~l~~~~t~eei~~~l~ 248 (343)
T 2yyy_A 212 KILTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIK 248 (343)
T ss_dssp SEEEEEEEESCSSCEEEEEEEEEESCCCHHHHHHHHH
T ss_pred ceeeEEEEecccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999874
No 24
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=3.7e-43 Score=314.32 Aligned_cols=234 Identities=21% Similarity=0.238 Sum_probs=179.3
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcC--CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEE
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~--p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 77 (265)
|+|+||||+|+ |++|++++|+|.+| |++|+++++++...+. .+.++++.+.
T Consensus 1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~--------------------------~~~~~~~~i~ 54 (336)
T 2r00_A 1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGK--------------------------TYRFNGKTVR 54 (336)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTC--------------------------EEEETTEEEE
T ss_pred CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCC--------------------------ceeecCceeE
Confidence 45799999997 99999999999999 8999999997532221 2334455555
Q ss_pred EEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC---CCCCceEEeeeccccccC--CCCeEEcC
Q 024565 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNEHEYKP--ELNIVSNA 152 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~---~~~~~~~v~~vn~~~~~~--~~~~Va~p 152 (265)
+.. .+++ +| .++|+||+|+|++.+.+.++.++++|++.+.+|++ +++.|.++||+|+++++. .+++|+||
T Consensus 55 ~~~-~~~~--~~--~~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp 129 (336)
T 2r00_A 55 VQN-VEEF--DW--SQVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANP 129 (336)
T ss_dssp EEE-GGGC--CG--GGCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECC
T ss_pred Eec-CChH--Hh--cCCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECC
Confidence 532 3443 46 57999999999999999999999999954445776 345789999999999984 26799999
Q ss_pred CCchhhhHhHHHHHHHhcCceEEEEEEEeecccccc-ccCCCCC-----------CcccCCccCCCceeecCC-----Ch
Q 024565 153 SCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPSS-----------KDWRGGRAASFNIIPSST-----GA 215 (265)
Q Consensus 153 ~C~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~-~~d~~~~-----------~~~~~~~~~a~n~~p~~~-----~~ 215 (265)
|||+|+++++|+||+++|+|+++.++++|++||+++ ..+.+.. .++++++.+++|++|+.+ +|
T Consensus 130 ~C~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh 209 (336)
T 2r00_A 130 NCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGY 209 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSC
T ss_pred ChHHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCc
Confidence 999999999999999999999999999999999964 5555321 256778889999999874 66
Q ss_pred hhH-------HHhhccCCCCceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 216 AKA-------VGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 216 ~~~-------~~~~l~e~~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
.+| ..+++|+.+++++|+|+|||++|||+.++|++++++++.||++++|+
T Consensus 210 ~~Ee~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~~t~~ei~~~~~ 266 (336)
T 2r00_A 210 TKEEMKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAPIDAEQVMDMLE 266 (336)
T ss_dssp BHHHHHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCCCCHHHHHHHHH
Confidence 544 46677888889999999999999999999999999999999999874
No 25
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=7.1e-42 Score=305.33 Aligned_cols=228 Identities=23% Similarity=0.335 Sum_probs=188.4
Q ss_pred cEEEEEcc-ChhHHHHHHHHH--cCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 4 VKIGINGF-GRIGRLVARVIL--QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~--~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
+||||+|+ |++|++++|+|. +||.+++..+.+.. ..|+.+.++|+.+.+..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~--------------------------~~g~~l~~~g~~i~v~~ 54 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPR--------------------------SAGVRLAFRGEEIPVEP 54 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGG--------------------------GSSCEEEETTEEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccc--------------------------cCCCEEEEcCceEEEEe
Confidence 48999997 999999999999 78877765544321 11234667777777764
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC---CCCCceEEeeeccccccCCCCeEEcCCCchh
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNEHEYKPELNIVSNASCTTN 157 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~---~~~~~~~v~~vn~~~~~~~~~~Va~p~C~~t 157 (265)
. +++ +| ++|+||+|+|++.++++++.++++|++.+.+|++ .++.|.++||+|+++++...++|+|||||+|
T Consensus 55 ~-~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt 128 (331)
T 2yv3_A 55 L-PEG--PL---PVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTA 128 (331)
T ss_dssp C-CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHH
T ss_pred C-Chh--hc---CCCEEEECCCccchHHHHHHHHHCCCEEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHH
Confidence 3 444 47 6999999999999999999999999965555776 3467899999999999853579999999999
Q ss_pred hhHhHHHHHHHhcCceEEEEEEEeecccc------------ccccCCCCCCcccCCccCCCceeecC-----CChhhH--
Q 024565 158 CLAPLAKVIHDKFGIVEGLMTTVHSITAT------------QKTVDGPSSKDWRGGRAASFNIIPSS-----TGAAKA-- 218 (265)
Q Consensus 158 a~~~~L~pL~~~~~i~~~~v~~v~~~sg~------------~~~~d~~~~~~~~~~~~~a~n~~p~~-----~~~~~~-- 218 (265)
+++++|+||+++|+|+++.++++|++||+ +...|++...++++++.+++|++|+. |+|.+|
T Consensus 129 ~~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~ 208 (331)
T 2yv3_A 129 ILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEM 208 (331)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHH
T ss_pred HHHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHH
Confidence 99999999999999999999999999998 44456554467888999999999987 455555
Q ss_pred -H----Hhhc--cCCCCceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 219 -V----GKVL--PALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 219 -~----~~~l--~e~~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
+ .+++ |++ +++|+|+|||++|||+.+++++++++++.||++++|+
T Consensus 209 ~i~~e~~kil~~~~l--~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~ 260 (331)
T 2yv3_A 209 KVVWETHKIFGDDTI--RISATAVRVPTLRAHAEAVSVEFARPVTPEAAREVLK 260 (331)
T ss_dssp HHHHHHHHHTTCTTC--EEEEECCBCSCSSEEEEEEEEEESSCCCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCc--eEEEEEEEeccCceEEEEEEEEECCCCCHHHHHHHHH
Confidence 4 6676 666 4999999999999999999999999999999999985
No 26
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.1e-41 Score=305.27 Aligned_cols=231 Identities=13% Similarity=0.155 Sum_probs=187.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHH--cCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 3 KVKIGINGF-GRIGRLVARVIL--QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~--~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
++||+|+|+ |++|++++|+|. +||.+++++++++...+. .+.++|..+.+.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~--------------------------~~~~~g~~i~~~ 59 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ--------------------------RMGFAESSLRVG 59 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC--------------------------EEEETTEEEECE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC--------------------------ccccCCcceEEe
Confidence 589999998 999999999999 889999999987632221 123344444443
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCC--CCCceEEeeeccccccCCC---CeEEcCCC
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS--KDAPMFVVGVNEHEYKPEL---NIVSNASC 154 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~--~~~~~~v~~vn~~~~~~~~---~~Va~p~C 154 (265)
. .+++. | .++|+||+|+|++.+.+.++.++++|++.+++|++. ++.|..++++|+++++. + ++|+||||
T Consensus 60 ~-~~~~~--~--~~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~-~~~~~iIanp~C 133 (340)
T 2hjs_A 60 D-VDSFD--F--SSVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLAS-QAAPFLLSSPCA 133 (340)
T ss_dssp E-GGGCC--G--GGCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGG-SCSSCEEECCCH
T ss_pred c-CCHHH--h--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhc-CcCCCEEEcCCH
Confidence 2 34433 5 579999999999999999999999999755567773 34678888999999985 4 79999999
Q ss_pred chhhhHhHHHHHHHhcCceEEEEEEEeeccccccc-cCCC-----------CCCcccCCccCCCceeecCC-----Chhh
Q 024565 155 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT-VDGP-----------SSKDWRGGRAASFNIIPSST-----GAAK 217 (265)
Q Consensus 155 ~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~-~d~~-----------~~~~~~~~~~~a~n~~p~~~-----~~~~ 217 (265)
|+|+++++|+||+++|+|+++.++++|++||+++. .+.+ ......+++.+++|++||.. +|.+
T Consensus 134 ~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~ 213 (340)
T 2hjs_A 134 VAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSA 213 (340)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBH
T ss_pred HHHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccH
Confidence 99999999999999999999999999999998653 4431 01234567788999999975 7666
Q ss_pred H-------HHhhccCCCCceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 218 A-------VGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 218 ~-------~~~~l~e~~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
| ..+++|+++++++|+|+|||++|||+.++|++|+++++.||++++|+
T Consensus 214 Ee~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~ 268 (340)
T 2hjs_A 214 IERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLD 268 (340)
T ss_dssp HHHHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCCCCHHHHHHHHh
Confidence 6 45677877889999999999999999999999999999999999874
No 27
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.3e-42 Score=310.71 Aligned_cols=231 Identities=23% Similarity=0.287 Sum_probs=183.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeec--ccCCcccccce-eeeCCceEEECCEEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~l~~~g~~~~~~ 79 (265)
|+||||+|+|++|++++|+|.+||++++++|++.. ....++++.++ ++|+.|. +.+ ...+. .+.+++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~--~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~l~v~~------ 70 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTR--PDFEARMALKKGYDLYVAIP-ERVKLFEKA-GIEVAG------ 70 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESS--CSHHHHHHHHTTCCEEESSG-GGHHHHHHT-TCCCCE------
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCC--hhHHHHhcCCcchhhccccc-cceeeecCC-ceEEcC------
Confidence 48999999999999999999999999999999874 22233334333 5666665 221 00100 121111
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCC-CC--ceEEeeeccccccCCCCeEEcCCCch
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DA--PMFVVGVNEHEYKPELNIVSNASCTT 156 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~-~~--~~~v~~vn~~~~~~~~~~Va~p~C~~ 156 (265)
+++++ + .++|+||+|||++.+.+.++.++++|++ ++.++... |. |++|||+|++++++ +++|+||||++
T Consensus 71 ---~~~~~-~--~~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~t 142 (337)
T 1cf2_P 71 ---TVDDM-L--DEADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNT 142 (337)
T ss_dssp ---EHHHH-H--HTCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHH
T ss_pred ---CHHHH-h--cCCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHH
Confidence 12222 1 3699999999999999999999999975 55543323 33 89999999999985 79999999999
Q ss_pred hhhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeec----CCChhhHHHhhccCCCCceeE
Q 024565 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKLTG 232 (265)
Q Consensus 157 ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~----~~~~~~~~~~~l~e~~~~v~~ 232 (265)
|+++++|+||+++|||+++.++++|+.|+ + +.+++..++|++|+ .++|.+|+.|++ +++ +++
T Consensus 143 t~l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p----~~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l~--v~~ 208 (337)
T 1cf2_P 143 TGLCRTLKPLHDSFGIKKVRAVIVRRGAD-------P----AQVSKGPINAIIPNPPKLPSHHGPDVKTVL-DIN--IDT 208 (337)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEESSC-------T----TCTTCCCSSCCEESSSSSSCTHHHHHHTTS-CCC--EEE
T ss_pred HHHHHHHHHHHHhcCcceeEEEEEEEeec-------C----CccccchhcCEEeccCCCCCcchHHHHhhh-eeE--EEE
Confidence 99999999999999999999999998876 1 23456789999999 577889999999 774 999
Q ss_pred EEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 233 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 233 ~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
+|+|||++|||+.++|++|+++++.||++++|+
T Consensus 209 t~~rVPv~~g~~~~~~v~l~~~~t~eei~~~~~ 241 (337)
T 1cf2_P 209 MAVIVPTTLMHQHNVMVEVEETPTVDDIIDVFE 241 (337)
T ss_dssp EEEEESCCSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred EEEEcCccCeEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999999999999999999999999999874
No 28
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=3.9e-41 Score=302.92 Aligned_cols=232 Identities=16% Similarity=0.223 Sum_probs=184.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcC--CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 3 KVKIGINGF-GRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~--p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
++||||+|+ ||+|++++|+|.+| |.+++..+.+.+..++ .+.+.|+++.+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~--------------------------~~~~~~~~~~~- 54 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGK--------------------------SLKFKDQDITI- 54 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTC--------------------------EEEETTEEEEE-
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCC--------------------------cceecCCCceE-
Confidence 689999999 99999999999998 8899999887643332 23344444544
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC---CCCCceEEeeeccccccCCCCeEEcCCCch
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNEHEYKPELNIVSNASCTT 156 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~---~~~~~~~v~~vn~~~~~~~~~~Va~p~C~~ 156 (265)
.+.+++++ .++|+||+|+|++.++++++.++++|++.+.+|++ +++.|.++||+|++.++..+++|+||||++
T Consensus 55 ~~~~~~~~----~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC~t 130 (366)
T 3pwk_A 55 EETTETAF----EGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCST 130 (366)
T ss_dssp EECCTTTT----TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCHHH
T ss_pred eeCCHHHh----cCCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCcHH
Confidence 22344444 57999999999999999999999999965556777 345789999999999985478999999999
Q ss_pred hhhHhHHHHHHHhcCceEEEEEEEeecccccccc-CC---------------CCCCcccCC-------ccCCCceeecCC
Q 024565 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTV-DG---------------PSSKDWRGG-------RAASFNIIPSST 213 (265)
Q Consensus 157 ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~-d~---------------~~~~~~~~~-------~~~a~n~~p~~~ 213 (265)
|+++++|+||+++++|+++.+++++++||+++.. +. .......++ .+++||++|+..
T Consensus 131 t~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I~ 210 (366)
T 3pwk_A 131 IQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQID 210 (366)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCSS
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccceec
Confidence 9999999999999999999999999999984422 10 000011233 679999999973
Q ss_pred -----ChhhHHHh-------hccCCCCceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 214 -----GAAKAVGK-------VLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 214 -----~~~~~~~~-------~l~e~~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
++.+|+.| +++....+++|+|++||++|||+.++|++++++++.+|++++|+
T Consensus 211 ~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~~s~eei~~~l~ 274 (366)
T 3pwk_A 211 VFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIA 274 (366)
T ss_dssp CBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHH
T ss_pred ccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCCCCHHHHHHHHH
Confidence 66666654 44444457999999999999999999999999999999999873
No 29
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=6.9e-41 Score=299.22 Aligned_cols=231 Identities=20% Similarity=0.311 Sum_probs=183.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcC--CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 4 VKIGINGF-GRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~--p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
+||||+|+ ||+|++++|+|.+| |.+++..+.+.+..++ .+.+.|+++.+ +
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~--------------------------~~~~~~~~~~~-~ 54 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGR--------------------------KLAFRGQEIEV-E 54 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSC--------------------------EEEETTEEEEE-E
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCC--------------------------ceeecCCceEE-E
Confidence 79999999 99999999999998 8899999887643332 33344555544 2
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC---CCCCceEEeeecc-ccccCC-CCeEEcCCCc
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNE-HEYKPE-LNIVSNASCT 155 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~---~~~~~~~v~~vn~-~~~~~~-~~~Va~p~C~ 155 (265)
+.+++.+ .++|+||+|+|++.++++++.++++|++.+.+|++ +++.|.++||+|+ +.++.. .++|+||||+
T Consensus 55 ~~~~~~~----~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~ 130 (344)
T 3tz6_A 55 DAETADP----SGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCT 130 (344)
T ss_dssp ETTTSCC----TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHH
T ss_pred eCCHHHh----ccCCEEEECCChHHHHHHHHHHHhCCCEEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcH
Confidence 2344443 57999999999999999999999999965555776 3567999999999 999752 4899999999
Q ss_pred hhhhHhHHHHHHHhcCceEEEEEEEeecccccccc--------------------CCCCC---CcccCCccCCCceeecC
Q 024565 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTV--------------------DGPSS---KDWRGGRAASFNIIPSS 212 (265)
Q Consensus 156 ~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~--------------------d~~~~---~~~~~~~~~a~n~~p~~ 212 (265)
+|+++++|+||+++++|+++.++++|++||+++.. ++... ..+.+++.++||++|+.
T Consensus 131 tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i 210 (344)
T 3tz6_A 131 TMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLA 210 (344)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCC
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999984421 11100 12356778999999984
Q ss_pred -------CChhhHHHh-------hccCCCCceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 213 -------TGAAKAVGK-------VLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 213 -------~~~~~~~~~-------~l~e~~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|.|.+|+.+ ++..-..+++|+|+|||++|||+.++|++|+++++.+|++++|+
T Consensus 211 ~~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~~s~eei~~~l~ 277 (344)
T 3tz6_A 211 GSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLD 277 (344)
T ss_dssp SCBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred cccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCCCCHHHHHHHHh
Confidence 345776443 33222246999999999999999999999999999999999873
No 30
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=3e-41 Score=303.77 Aligned_cols=236 Identities=17% Similarity=0.219 Sum_probs=184.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
++||||+|+ ||+|++++|+|.+||++|++.+.+++..++.+.....+ ..++.++ .. . +++.+ .+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~-~~~~~~~-~~-----~-------~~~~v-~~ 71 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRW-QTVGQVP-KE-----I-------ADMEI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCC-CSSSCCC-HH-----H-------HTCBC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhccc-ccccccc-cc-----c-------ccceE-Ee
Confidence 589999999 99999999999999999999998876555544311000 0011111 00 0 01112 11
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC---CCCCceEEeeeccccccC--C--------CCe
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNEHEYKP--E--------LNI 148 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~---~~~~~~~v~~vn~~~~~~--~--------~~~ 148 (265)
.+++++ .++|+||+|+|++.++++++.++++|++.+++|++ +++.|..+||+|+++++. . +++
T Consensus 72 ~~~~~~----~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpk_A 72 TDPKLM----DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGGC----TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHHh----cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 233333 57999999999999999999999999976667887 346788999999998742 1 369
Q ss_pred EEcCCCchhhhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCC----hhhHHHhhcc
Q 024565 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKVLP 224 (265)
Q Consensus 149 Va~p~C~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~----~~~~~~~~l~ 224 (265)
|+|||||+|+++++|+||+++|||+++.+++++++||+++.. .+ ...+++|++||..+ +.+|+.++++
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~~---~~-----~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpk_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYPG---IP-----SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSSC---SB-----GGGTTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCcC---cc-----ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999987651 11 14688999999853 3467888888
Q ss_pred CCCC----------ceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 225 ALNG----------KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 225 e~~~----------~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
++.+ +++|+|+|||++|||+.++|++++++++.||++++|+
T Consensus 220 ~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~ 270 (359)
T 4dpk_A 220 EVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLE 270 (359)
T ss_dssp TSCCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred hcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHH
Confidence 7754 6999999999999999999999999999999999873
No 31
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=3e-41 Score=303.77 Aligned_cols=236 Identities=17% Similarity=0.219 Sum_probs=184.5
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
++||||+|+ ||+|++++|+|.+||++|++.+.+++..++.+.....+ ..++.++ .. . +++.+ .+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~-~~~~~~~-~~-----~-------~~~~v-~~ 71 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRW-QTVGQVP-KE-----I-------ADMEI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCC-CSSSCCC-HH-----H-------HTCBC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhccc-ccccccc-cc-----c-------ccceE-Ee
Confidence 589999999 99999999999999999999998876555544311000 0011111 00 0 01112 11
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC---CCCCceEEeeeccccccC--C--------CCe
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNEHEYKP--E--------LNI 148 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~---~~~~~~~v~~vn~~~~~~--~--------~~~ 148 (265)
.+++++ .++|+||+|+|++.++++++.++++|++.+++|++ +++.|..+||+|+++++. . +++
T Consensus 72 ~~~~~~----~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpl_A 72 TDPKLM----DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGGC----TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHHh----cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 233333 57999999999999999999999999976667887 346788999999998742 1 369
Q ss_pred EEcCCCchhhhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCC----hhhHHHhhcc
Q 024565 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKVLP 224 (265)
Q Consensus 149 Va~p~C~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~----~~~~~~~~l~ 224 (265)
|+|||||+|+++++|+||+++|||+++.+++++++||+++.. .+ ...+++|++||..+ +.+|+.++++
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~~---~~-----~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpl_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYPG---IP-----SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSSC---SB-----HHHHTTCCEECCHHHHHHHHHHHHHHHT
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCcC---cc-----ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999987651 11 13578999999853 3467888888
Q ss_pred CCCC----------ceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 225 ALNG----------KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 225 e~~~----------~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
++.+ +++|+|+|||++|||+.++|++++++++.||++++|+
T Consensus 220 ~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~ 270 (359)
T 4dpl_A 220 EVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLE 270 (359)
T ss_dssp TSCCSSCCSCGGGCEEEEECEECSCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred hcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHH
Confidence 7754 6999999999999999999999999999999999873
No 32
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=2.1e-41 Score=306.17 Aligned_cols=240 Identities=22% Similarity=0.279 Sum_probs=178.7
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe-ccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVN-DPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+|+||||+|+ ||+|++++|+|.+||++|+..+. +.+..++.+. +.++.+. .. .++.+.+++.+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~------~~~~~~~-~~-------~~p~~~~~~~v 82 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYK------DAASWKQ-TE-------TLPETEQDIVV 82 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHH------HHCCCCC-SS-------CCCHHHHTCBC
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHH------Hhccccc-cc-------ccccccccceE
Confidence 77899999999 99999999999999999999986 4443454432 2222211 00 00000011112
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC---CCCCceEEeeecccccc------------
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNEHEYK------------ 143 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~---~~~~~~~v~~vn~~~~~------------ 143 (265)
++.++++ +| .++|+||+|+|++.++++++.++++|++.+.+|++ +++.|++++++|.+.+.
T Consensus 83 -~~~~~~~-~~--~~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~~ 158 (381)
T 3hsk_A 83 -QECKPEG-NF--LECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVSK 158 (381)
T ss_dssp -EESSSCT-TG--GGCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHHT
T ss_pred -EeCchhh-hc--ccCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhccc
Confidence 2223331 23 57999999999999999999999999976666777 34678999999877653
Q ss_pred ---CCCCeEEcCCCchhhhHhHHHHHHHhcC-ceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCC----h
Q 024565 144 ---PELNIVSNASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----A 215 (265)
Q Consensus 144 ---~~~~~Va~p~C~~ta~~~~L~pL~~~~~-i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~----~ 215 (265)
+++++|+|||||+|+++++|+||+++|| |+++.+++++++||+++.... . ...+++|++||..+ +
T Consensus 159 ~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~~----~---~~~~~~N~~Py~~~~e~k~ 231 (381)
T 3hsk_A 159 GGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPGV----S---GMDILDNIVPYISGEEDKL 231 (381)
T ss_dssp TCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC------C----C---HHHHTTCCBCCCTTHHHHH
T ss_pred ccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCCc----c---hhhhhcChhhcccchHHHH
Confidence 2467999999999999999999999878 899999999999998752111 1 13688999999965 3
Q ss_pred hhHHHhhccCCCC-------------ceeEEEEEeeeCceEEEEEEEEecC--CCCHHHHHHHhC
Q 024565 216 AKAVGKVLPALNG-------------KLTGMAFRVPTVDVSVVDLTVRLEK--DASYDEIKAAIK 265 (265)
Q Consensus 216 ~~~~~~~l~e~~~-------------~v~~~~~~vP~~~G~~~~~~v~~~~--~~~~e~v~~~~~ 265 (265)
.+|+.|+++.+.+ +++|+|+|||++|||+.++|++|++ +++.||++++|+
T Consensus 232 ~~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~~t~eei~~~l~ 296 (381)
T 3hsk_A 232 EWETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPAPSVEDVKQCLR 296 (381)
T ss_dssp HHHHHHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSCCCHHHHHHHHH
T ss_pred HHHHHHHhhhcccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCCCCHHHHHHHHH
Confidence 4677888876543 7899999999999999999999999 899999999873
No 33
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=6.5e-41 Score=301.56 Aligned_cols=237 Identities=20% Similarity=0.225 Sum_probs=183.6
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe-ccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVN-DPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
+|+||||+|+ |++|++++|+|.+||++|+++++ +++..+.. +++.|+.+.+.. +..++..+.+
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~------~~~~~~~~~~~~--------~~~~~~~~~~- 67 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKK------YKDAVKWIEQGD--------IPEEVQDLPI- 67 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSB------HHHHCCCCSSSS--------CCHHHHTCBE-
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCC------HHHhcCcccccc--------cccCCceeEE-
Confidence 4799999997 99999999999999999999998 33323322 345565541000 1111112223
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC---CCCCceEEeeeccccccC----------CC
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNEHEYKP----------EL 146 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~---~~~~~~~v~~vn~~~~~~----------~~ 146 (265)
.+.++++ | .++|+||+|+|++.+.+.++.++++|++.+..|++ .++.|.++|++|++.+.. ++
T Consensus 68 ~~~d~~~--~--~~vDvVf~atp~~~s~~~a~~~~~aG~~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 143 (350)
T 2ep5_A 68 VSTNYED--H--KDVDVVLSALPNELAESIELELVKNGKIVVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKG 143 (350)
T ss_dssp ECSSGGG--G--TTCSEEEECCCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSS
T ss_pred eeCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCc
Confidence 2223333 4 47999999999999999999999999853334655 245788999999876551 35
Q ss_pred CeEEcCCCchhhhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCC----hhhHHHhh
Q 024565 147 NIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKV 222 (265)
Q Consensus 147 ~~Va~p~C~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~----~~~~~~~~ 222 (265)
++|+|||||+|+++++|+||+++++++++.+++++++||+++.. . + .+.+++|++||..+ |.+|+.++
T Consensus 144 ~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~~--~-~-----~~~~~~ni~py~~~~e~k~~~E~~~~ 215 (350)
T 2ep5_A 144 ILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYNG--I-S-----FMAIEGNIIPYIKGEEDKIAKELTKL 215 (350)
T ss_dssp EEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSSS--S-B-----HHHHTTCCBCCCTTHHHHHHHHHHHH
T ss_pred eEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCCC--C-C-----ChHHhCCEEeccCCcchHHHHHHHHH
Confidence 79999999999999999999998999999999999999987652 1 1 24578899999966 45677888
Q ss_pred ccCCCC--------ceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 223 LPALNG--------KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 223 l~e~~~--------~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
++++.+ +++|+|+|||++|||+.++|++++++++.||++++|+
T Consensus 216 l~~~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~ 266 (350)
T 2ep5_A 216 NGKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLK 266 (350)
T ss_dssp TCEECSSSEECCCCEEEEEEEECSCSSCEEEEEEEECCSCCCHHHHHHHHH
T ss_pred HhhccccccccccccEEEEeEEecccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 888755 6999999999999999999999999999999999874
No 34
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=9.5e-41 Score=301.26 Aligned_cols=233 Identities=16% Similarity=0.203 Sum_probs=177.7
Q ss_pred ccEEEEEcc-ChhHHHHHH-HHHcCC--CeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 3 KVKIGINGF-GRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~-~L~~~p--~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
++||||+|+ ||+|++++| +|.+|| .+++..+.++ ..+..+. .|. |..+.+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~----------~~~---------------~~~~~v 57 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAP----------SFA---------------KNETTL 57 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCC----------TTC---------------CSCCBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHH----------HcC---------------CCceEE
Confidence 589999999 999999999 999998 6888888775 3443211 111 111112
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE--cCC---CCCCceEEeeeccccccCC--C--CeE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAP---SKDAPMFVVGVNEHEYKPE--L--NIV 149 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi--s~~---~~~~~~~v~~vn~~~~~~~--~--~~V 149 (265)
....+++++ .++|+||+|+|++.++++++.++++|+|.+|| |++ +++.|.++||+|+++++.. . ++|
T Consensus 58 ~~~~~~~~~----~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~I 133 (377)
T 3uw3_A 58 KDATSIDDL----KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNF 133 (377)
T ss_dssp EETTCHHHH----HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCChhHh----cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEE
Confidence 111122222 57999999999999999999999999865666 544 2456889999999988641 2 459
Q ss_pred EcCCCchhhhHhHHHHHHHhcCceEEEEEEEeeccccccccC-------------------CC-----------------
Q 024565 150 SNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVD-------------------GP----------------- 193 (265)
Q Consensus 150 a~p~C~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d-------------------~~----------------- 193 (265)
+|||||+|+++++|+||+++++|+++.++++|++||+++... .+
T Consensus 134 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~ 213 (377)
T 3uw3_A 134 IGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNG 213 (377)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHS
T ss_pred EcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999844210 01
Q ss_pred -CCCcccCCccCCCceeecC-----CChhhH-------HHhhccCC------CCceeEEEEEeeeCceEEEEEEEEecCC
Q 024565 194 -SSKDWRGGRAASFNIIPSS-----TGAAKA-------VGKVLPAL------NGKLTGMAFRVPTVDVSVVDLTVRLEKD 254 (265)
Q Consensus 194 -~~~~~~~~~~~a~n~~p~~-----~~~~~~-------~~~~l~e~------~~~v~~~~~~vP~~~G~~~~~~v~~~~~ 254 (265)
+.....|++++++|++||. |+|.+| .++++... ..+++|+|+|||++|||++++|++|+++
T Consensus 214 ~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~ 293 (377)
T 3uw3_A 214 DAMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKD 293 (377)
T ss_dssp TTSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSC
T ss_pred cccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEEEEeCCC
Confidence 1123467788999999997 455555 44555543 3469999999999999999999999999
Q ss_pred CCHHHHHHHhC
Q 024565 255 ASYDEIKAAIK 265 (265)
Q Consensus 255 ~~~e~v~~~~~ 265 (265)
++.+|++++|+
T Consensus 294 ~~~eei~~~l~ 304 (377)
T 3uw3_A 294 VPLDEINGILA 304 (377)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999999873
No 35
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=4.3e-40 Score=296.33 Aligned_cols=232 Identities=17% Similarity=0.176 Sum_probs=176.5
Q ss_pred cEEEEEcc-ChhHHHHHH-HHHcCC--CeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 4 VKIGINGF-GRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~-~L~~~p--~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|||||+|+ ||+|++++| +|.+|| .+++..+++++ .++.+. .|. |..+.+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~----------~~~---------------~~~~~~~ 54 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAP----------NFG---------------KDAGMLH 54 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCC----------CSS---------------SCCCBCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHH----------HhC---------------CCceEEE
Confidence 58999999 999999999 999998 68888887764 443211 111 1111121
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE--cCC---CCCCceEEeeeccccccCC----CCeEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAP---SKDAPMFVVGVNEHEYKPE----LNIVS 150 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi--s~~---~~~~~~~v~~vn~~~~~~~----~~~Va 150 (265)
...+++++ .++|+||+|+|++.++++++.++++|+|.+|| |++ +++.|.++||+|+++++.. .++|+
T Consensus 55 ~~~~~~~~----~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 130 (370)
T 3pzr_A 55 DAFDIESL----KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFV 130 (370)
T ss_dssp ETTCHHHH----TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred ecCChhHh----ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEE
Confidence 11122222 57999999999999999999999999865666 444 2456889999999988631 24699
Q ss_pred cCCCchhhhHhHHHHHHHhcCceEEEEEEEeeccccccccC-------------------------------------CC
Q 024565 151 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVD-------------------------------------GP 193 (265)
Q Consensus 151 ~p~C~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d-------------------------------------~~ 193 (265)
|||||+|+++++|+||+++++|+++.++++|++||+++... +.
T Consensus 131 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~ 210 (370)
T 3pzr_A 131 GGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRSG 210 (370)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHST
T ss_pred cCChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999854210 00
Q ss_pred CCCcccCCccCCCceeecC-----CChhhHH-------HhhccC--CCCceeEEEEEeeeCceEEEEEEEEecCCCCHHH
Q 024565 194 SSKDWRGGRAASFNIIPSS-----TGAAKAV-------GKVLPA--LNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDE 259 (265)
Q Consensus 194 ~~~~~~~~~~~a~n~~p~~-----~~~~~~~-------~~~l~e--~~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~ 259 (265)
......+++++++|++||. ||+.+|+ +++++. -..+++|+|+|||++|||+.++|++|+++++.+|
T Consensus 211 ~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~~~~~e 290 (370)
T 3pzr_A 211 SFPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDE 290 (370)
T ss_dssp TSCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEEEEEEEEEESSCCCHHH
T ss_pred ccccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHH
Confidence 1123467788999999997 3454443 445543 1346999999999999999999999999999999
Q ss_pred HHHHhC
Q 024565 260 IKAAIK 265 (265)
Q Consensus 260 v~~~~~ 265 (265)
++++|+
T Consensus 291 i~~~l~ 296 (370)
T 3pzr_A 291 IEEMIA 296 (370)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999873
No 36
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=5e-40 Score=293.11 Aligned_cols=226 Identities=14% Similarity=0.138 Sum_probs=173.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccc---cChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPF---ITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+||+|+|+ |++|++++++|.+||+++++.+.+++ ..++.+ .+.|++|. +. .++.+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~------~~~~p~~~-~~-------------~~~~v 63 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI------SDLHPQLK-GI-------------VELPL 63 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH------HHHCGGGT-TT-------------CCCBE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch------HHhCcccc-Cc-------------cceeE
Confidence 589999999 99999999999999999999998775 344432 24456554 10 01112
Q ss_pred EecC-CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCC-C-C--Cc---------------eEEeee-
Q 024565 79 FGVR-NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-K-D--AP---------------MFVVGV- 137 (265)
Q Consensus 79 ~~~~-~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~-~-~--~~---------------~~v~~v- 137 (265)
.+. +++++ ..++|+||+|+|++.++++++.++++|++.+.+|++. - | ++ .+|||+
T Consensus 64 -~~~~~~~~~---~~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglP 139 (337)
T 3dr3_A 64 -QPMSDISEF---SPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLA 139 (337)
T ss_dssp -EEESSGGGT---CTTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCT
T ss_pred -eccCCHHHH---hcCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEcc
Confidence 111 33333 1579999999999999999999999999766678872 1 2 21 356765
Q ss_pred --ccccccCCCCeEEcCCCchhhhHhHHHHHHH--hcCceEE-EEEEEeecccccccc-CCCCCCcccCCccCCCceeec
Q 024565 138 --NEHEYKPELNIVSNASCTTNCLAPLAKVIHD--KFGIVEG-LMTTVHSITATQKTV-DGPSSKDWRGGRAASFNIIPS 211 (265)
Q Consensus 138 --n~~~~~~~~~~Va~p~C~~ta~~~~L~pL~~--~~~i~~~-~v~~v~~~sg~~~~~-d~~~~~~~~~~~~~a~n~~p~ 211 (265)
|+++++. +++|+|||||+|+++++|+||++ .++++++ .+++++++||+++.. +. .+.+ ++ |++||
T Consensus 140 Evn~~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~-~~~~-----~~--n~~py 210 (337)
T 3dr3_A 140 EWCGNKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAIS-NSFC-----EV--SLQPY 210 (337)
T ss_dssp TTCCHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCST-TSGG-----GC--SEEEC
T ss_pred ccCHHHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccc-cccc-----cc--ceEcc
Confidence 9999985 89999999999999999999999 4777788 899999999986433 32 2222 22 88998
Q ss_pred CCChhhHHHhhccCCCC----ceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 212 STGAAKAVGKVLPALNG----KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 212 ~~~~~~~~~~~l~e~~~----~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
..+. |+|+||+.+ +++|+|+|||++|||+.++|++++++++.||++++|+
T Consensus 211 ~~~~----h~h~Pei~~~l~~~v~ft~~rvPv~rG~~~ti~~~l~~~~t~eev~~~l~ 264 (337)
T 3dr3_A 211 GVFT----HRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQ 264 (337)
T ss_dssp STTT----CTHHHHHHHHHTSCCEEEEEEESSSSCEEEEEEEEBCTTCCHHHHHHHHH
T ss_pred Cccc----ceechhHHhhhcCCEEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHH
Confidence 8542 455555543 7999999999999999999999999999999998873
No 37
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=1.4e-39 Score=293.80 Aligned_cols=233 Identities=15% Similarity=0.163 Sum_probs=177.1
Q ss_pred ccEEEEEcc-ChhHHHHHH-HHHcCC--CeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 3 KVKIGINGF-GRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~-~L~~~p--~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+||||+|+ |++|++++| +|.+|+ .+++..+.+++ .+..+ +.+ +|+.+.+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v----------~~~---------------~g~~i~~ 54 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAA----------PSF---------------GGTTGTL 54 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBC----------CGG---------------GTCCCBC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCc----------ccc---------------CCCceEE
Confidence 379999998 999999999 777774 46776665542 22210 011 1122333
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE--cCC---CCCCceEEeeeccccccCC---C-CeE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII--SAP---SKDAPMFVVGVNEHEYKPE---L-NIV 149 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi--s~~---~~~~~~~v~~vn~~~~~~~---~-~~V 149 (265)
....++++ | .++|+||+|+|++.++++++.++++|+|.+|| |++ +++.|.++|++|+++++.. . ++|
T Consensus 55 ~~~~~~~~--~--~~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~I 130 (367)
T 1t4b_A 55 QDAFDLEA--L--KALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTF 130 (367)
T ss_dssp EETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EecCChHH--h--cCCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEE
Confidence 22122332 5 47999999999999999999999999976777 333 2357889999999998741 1 699
Q ss_pred EcCCCchhhhHhHHHHHHHhcCceEEEEEEEeeccccccc-------------------cCCCC----------------
Q 024565 150 SNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT-------------------VDGPS---------------- 194 (265)
Q Consensus 150 a~p~C~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~-------------------~d~~~---------------- 194 (265)
+||||++|+++++|+||+++++|+++.++++|++||+++. +|.+.
T Consensus 131 anp~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~ 210 (367)
T 1t4b_A 131 VGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRS 210 (367)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhcccccccc
Confidence 9999999999999999999999999999999999998432 12221
Q ss_pred --CCcccCCccCCCceeecCCC-----hh-------hHHHhhccC-CCCceeEEEEEeeeCceEEEEEEEEecCCCCHHH
Q 024565 195 --SKDWRGGRAASFNIIPSSTG-----AA-------KAVGKVLPA-LNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDE 259 (265)
Q Consensus 195 --~~~~~~~~~~a~n~~p~~~~-----~~-------~~~~~~l~e-~~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~ 259 (265)
.....|++.+++|++||..+ |. +|+.+++++ ...+++++|+|||++|||+.++|++++++++.||
T Consensus 211 ~~~~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~~t~ee 290 (367)
T 1t4b_A 211 GELPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPT 290 (367)
T ss_dssp TCSCCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEEESSCCCHHH
T ss_pred ccCcccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEEECCCCCHHH
Confidence 12345678899999999964 33 445667754 4457999999999999999999999999999999
Q ss_pred HHHHhC
Q 024565 260 IKAAIK 265 (265)
Q Consensus 260 v~~~~~ 265 (265)
++++|+
T Consensus 291 i~~~l~ 296 (367)
T 1t4b_A 291 VEELLA 296 (367)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 38
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=6.3e-39 Score=287.88 Aligned_cols=229 Identities=16% Similarity=0.071 Sum_probs=178.0
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~-~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+ |+||||+|+ |++|++++|+|.+||++|++++++...... ++++.|+.|. +. ..+.+
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~------~~~~~~~~~~-g~-------------~~~~~ 60 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGE------PVHFVHPNLR-GR-------------TNLKF 60 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTS------BGGGTCGGGT-TT-------------CCCBC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCc------hhHHhCchhc-Cc-------------ccccc
Confidence 54 689999997 999999999999999999999998643332 2467777775 10 01112
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC-CCCC-----------------ceEEeee---
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-SKDA-----------------PMFVVGV--- 137 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~-~~~~-----------------~~~v~~v--- 137 (265)
.+.+ +| .++|+||+|+|++.+.+.++.++++|++.+.+|++ +-+. +.++|++
T Consensus 61 ---~~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~ 133 (345)
T 2ozp_A 61 ---VPPE--KL--EPADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPEL 133 (345)
T ss_dssp ---BCGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHH
T ss_pred ---cchh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEecccc
Confidence 1222 35 57999999999999999999999999864445775 2111 3567665
Q ss_pred ccccccCCCCeEEcCCCchhhhHhHHHHHHHhcCce--EEEEEEEeeccccccc-cCCCCCCcccCCccCCCceeecCCC
Q 024565 138 NEHEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGGRAASFNIIPSSTG 214 (265)
Q Consensus 138 n~~~~~~~~~~Va~p~C~~ta~~~~L~pL~~~~~i~--~~~v~~v~~~sg~~~~-~d~~~~~~~~~~~~~a~n~~p~~~~ 214 (265)
|+++++. +++|+|||||+|+++++|+||+++++|+ ++.+++++++||+++. .+.. +.+ ....|++||..+
T Consensus 134 n~~~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~-~~~-----~~~~n~~py~~~ 206 (345)
T 2ozp_A 134 YREALKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPAS-HHP-----ERAGSIRVYKPT 206 (345)
T ss_dssp HHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGG-CHH-----HHTTCCEEEECS
T ss_pred CHHHhhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCccccccc-cch-----hhccccccCCCC
Confidence 9999995 8999999999999999999999999999 9999999999998754 3321 112 356788888744
Q ss_pred ---hhhHHHhhccCCCC-ceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 215 ---AAKAVGKVLPALNG-KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 215 ---~~~~~~~~l~e~~~-~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|.+|+.+.+. .+ +++|+|+|||++|||+.++|++++++++.|||+++|+
T Consensus 207 ~h~~~pei~~~l~--~~~~v~~~~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~ 259 (345)
T 2ozp_A 207 GHRHTAEVVENLP--GRPEVHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYR 259 (345)
T ss_dssp CCTHHHHHHHTSS--SCCCEEEEEEECSCSSCEEEEEEEEBCTTCCHHHHHHHHH
T ss_pred CccChHhHHHHhC--CCCCeEEEEEEeccccEEEEEEEEEeCCCCCHHHHHHHHH
Confidence 4556555554 14 7999999999999999999999999999999999873
No 39
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=1.2e-39 Score=294.01 Aligned_cols=232 Identities=11% Similarity=0.118 Sum_probs=178.4
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+++||||+|+ |++|++++|+|.+||++|++++++..... .++++.|+.|. +.+ .. ++.+
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g------~~~~~~~~~~~-~~v--~~---------dl~~- 74 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG------QSMESVFPHLR-AQK--LP---------TLVS- 74 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT------SCHHHHCGGGT-TSC--CC---------CCBC-
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC------CCHHHhCchhc-Ccc--cc---------ccee-
Confidence 45689999997 99999999999999999999999864333 23467787775 210 00 1111
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCC-CCC------------------ceEEeee---
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDA------------------PMFVVGV--- 137 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~-~~~------------------~~~v~~v--- 137 (265)
.+ ++ .| .++|+||+|+|++.+.+.++.+ ++|++.+.+|++. -+. +.++||+
T Consensus 75 --~~-~~-~~--~~vDvVf~atp~~~s~~~a~~~-~aG~~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~ 147 (359)
T 1xyg_A 75 --VK-DA-DF--STVDAVFCCLPHGTTQEIIKEL-PTALKIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEI 147 (359)
T ss_dssp --GG-GC-CG--GGCSEEEECCCTTTHHHHHHTS-CTTCEEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHH
T ss_pred --cc-hh-Hh--cCCCEEEEcCCchhHHHHHHHH-hCCCEEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCcc
Confidence 12 33 36 4799999999999999999999 9999544457762 121 3577776
Q ss_pred ccccccCCCCeEEcCCCchhhhHhHHHHHHHhcCce--EEEEEEEeeccccccc-cCCCCCCcccCCccCCCceeecC--
Q 024565 138 NEHEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGGRAASFNIIPSS-- 212 (265)
Q Consensus 138 n~~~~~~~~~~Va~p~C~~ta~~~~L~pL~~~~~i~--~~~v~~v~~~sg~~~~-~d~~~~~~~~~~~~~a~n~~p~~-- 212 (265)
|+++++. +++|+|||||+|+++++|+||+++++|+ ++.+++++++||+++. .+. ++.+ ....|++||.
T Consensus 148 n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~-~~~~-----~~~~ni~py~~~ 220 (359)
T 1xyg_A 148 LREDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEA-NLYS-----EIAEGISSYGVT 220 (359)
T ss_dssp HHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGG-GBHH-----HHTTCCEECSCS
T ss_pred CHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchh-hhhH-----HHhcCeeccccc
Confidence 9999995 8999999999999999999999999999 8899999999998764 332 1222 2456778877
Q ss_pred -CChhhHHHhhccCC---CCceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 213 -TGAAKAVGKVLPAL---NGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 213 -~~~~~~~~~~l~e~---~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|.|.+|+.+.+..+ ..+++|+|+|||++|||+.++|++++++++.|||+++|+
T Consensus 221 ~h~h~pEi~~~l~~~~~~~~~v~~t~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~ 277 (359)
T 1xyg_A 221 RHRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLK 277 (359)
T ss_dssp CCTHHHHHHHHHHHHHTSCCCCEEECEEESSSSCEEEEEEEEBCTTCCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhcCCCCCEEEEEEEecccceEEEEEEEEeCCCCCHHHHHHHHH
Confidence 45666665444322 236999999999999999999999999999999999874
No 40
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=100.00 E-value=5.9e-39 Score=288.11 Aligned_cols=234 Identities=12% Similarity=0.055 Sum_probs=178.5
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCC-----CeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCE
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p-----~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 74 (265)
|+|+||+|+|+ |++|++++|+|.+|| ++|++.++++...++. +++.|++|. +. ..
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~------~~~~~~~l~-~~----~~-------- 67 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGST------LGEHHPHLT-PL----AH-------- 67 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSB------GGGTCTTCG-GG----TT--------
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCc------hhhhccccc-cc----ce--------
Confidence 66789999998 999999999999999 9999999876533332 245677765 10 00
Q ss_pred EEEEEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCC-CCC----------------ceEEeee
Q 024565 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDA----------------PMFVVGV 137 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~-~~~----------------~~~v~~v 137 (265)
+.+.. .++++ | .++|+||+|+|++.+.++++.+ ++|++.+++|++. -+. +..+|++
T Consensus 68 -~~~~~-~~~~~--~--~~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv 140 (352)
T 2nqt_A 68 -RVVEP-TEAAV--L--GGHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPEL 140 (352)
T ss_dssp -CBCEE-CCHHH--H--TTCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTS
T ss_pred -eeecc-CCHHH--h--cCCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEeccc
Confidence 11111 22222 4 4799999999999999999999 9998655567772 121 4444556
Q ss_pred --ccccccCCCCeEEcCCCchhhhHhHHHHHHHhcCce-EEEEEEEeeccccccc-cCCCCCCcccCCccCCCceeecCC
Q 024565 138 --NEHEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITATQKT-VDGPSSKDWRGGRAASFNIIPSST 213 (265)
Q Consensus 138 --n~~~~~~~~~~Va~p~C~~ta~~~~L~pL~~~~~i~-~~~v~~v~~~sg~~~~-~d~~~~~~~~~~~~~a~n~~p~~~ 213 (265)
|+++++. +++|+|||||+|+++++|+||+++++|+ ++.+++++++||+++. .+. ++.++..++..+||+.|. |
T Consensus 141 ~~n~~~i~~-~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~-~~~~~~~~~~~ay~~~~~-h 217 (352)
T 2nqt_A 141 PGARDQLRG-TRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTD-LLGAEVIGSARAYNIAGV-H 217 (352)
T ss_dssp TTHHHHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGG-GSHHHHTTCCEECSTTTT-S
T ss_pred ccCHHHHhc-CCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCcccccc-ccHHHHhhhcccccCCCc-c
Confidence 9999984 8999999999999999999999999998 8899999999998443 332 244566666778888762 3
Q ss_pred ChhhHHHhhccCC---CCceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 214 GAAKAVGKVLPAL---NGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 214 ~~~~~~~~~l~e~---~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
.|.+|+.+.+..+ ..+++|+|+|||++|||+.++|++++++ .||++++|+
T Consensus 218 ~h~pEi~~e~~ki~~~~~~v~ft~~rvP~~rG~~~ti~~~l~~~--~~ei~~~~~ 270 (352)
T 2nqt_A 218 RHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSP--LSQLRAAYE 270 (352)
T ss_dssp TTHHHHHHHHHTTCSSCCEEEEEEEECSCSSCEEEEEEEECCSC--HHHHHHHHH
T ss_pred eecHHHHHHHHHHhCCCCCEEEEEEEEccccEEEEEEEEEECCC--HHHHHHHHH
Confidence 4677765544433 4579999999999999999999999887 899988873
No 41
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2.6e-38 Score=285.20 Aligned_cols=239 Identities=21% Similarity=0.266 Sum_probs=179.6
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec-cccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVND-PFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
||+||||+|+ |++|++++|+|.+||+++++++++ +...++. +++.|+.+.... +..++.++.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~------~~~~~~~~~~~~--------~~~~~~~~~~- 71 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKK------YKDACYWFQDRD--------IPENIKDMVV- 71 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSB------HHHHSCCCCSSC--------CCHHHHTCBC-
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccccccccc------HHHhcccccccc--------cccCceeeEE-
Confidence 3589999997 999999999999999999999984 4323332 234455441000 0000111222
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC---CCCCceEEeeeccccccC----------CC
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP---SKDAPMFVVGVNEHEYKP----------EL 146 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~---~~~~~~~v~~vn~~~~~~----------~~ 146 (265)
.+.++++ |...++|+||+|+|++.+.+.++.++++|++.+..|++ .++.|.++|++|++.+.. ++
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 149 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWDG 149 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCCSS
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCEEEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcccCC
Confidence 1134444 43237999999999999999999999999842223554 235788889999876651 24
Q ss_pred CeEEcCCCchhhhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeecCCC----hhhHHHhh
Q 024565 147 NIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTG----AAKAVGKV 222 (265)
Q Consensus 147 ~~Va~p~C~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~----~~~~~~~~ 222 (265)
++|+|||||+|+++++|+||++++||+++.+++++++||+++.. . + .+..++|++||..+ |.+|+.++
T Consensus 150 ~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~~--~-~-----~~~~~~ni~py~~~~~~k~~~Ei~~~ 221 (354)
T 1ys4_A 150 AIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYNG--V-P-----SMAILDNLIPFIKNEEEKMQTESLKL 221 (354)
T ss_dssp EEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTTT--S-C-----HHHHTTCCBSCCTTHHHHHHHHHHHH
T ss_pred eEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCccc--c-c-----chHHhCCEEeccCchhhHHHHHHHHH
Confidence 69999999999999999999998889999999999999987652 1 1 23578899999965 34667777
Q ss_pred ccCCCC--------ceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 223 LPALNG--------KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 223 l~e~~~--------~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
++++.+ +++|+|+|||++|||+.++|++++++++.||++++|+
T Consensus 222 l~~~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~ 272 (354)
T 1ys4_A 222 LGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMD 272 (354)
T ss_dssp TSEEETTEEECCCCEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHH
T ss_pred HhccccccccCCCceEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHH
Confidence 776533 6999999999999999999999999999999999874
No 42
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=4.7e-39 Score=287.46 Aligned_cols=227 Identities=12% Similarity=0.117 Sum_probs=170.2
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||||+|+ ||+|++++|+|.+||++|+..+++.+..++.+ ++.|++|. . ++.+ .+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~------~~~~p~~~-~---------------~l~~-~~ 69 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKL------EEIFPSTL-E---------------NSIL-SE 69 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBH------HHHCGGGC-C---------------CCBC-BC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCCh------HHhChhhc-c---------------CceE-Ee
Confidence 699999999 99999999999999999999999876555432 45566663 1 1112 11
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC-CC---C-----------C------ceEEeeeccc
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP-SK---D-----------A------PMFVVGVNEH 140 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~-~~---~-----------~------~~~v~~vn~~ 140 (265)
.+++++ | .++|+||+|+|++.++++++.+ +|++.+..|++ +- + . +..+|++|++
T Consensus 70 ~~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~e 144 (351)
T 1vkn_A 70 FDPEKV-S--KNCDVLFTALPAGASYDLVREL--KGVKIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHRE 144 (351)
T ss_dssp CCHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSCEEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHHH
T ss_pred CCHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCCEEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCHH
Confidence 222232 2 5699999999999999999988 88854444776 21 1 1 3333456999
Q ss_pred cccCCCCeEEcCCCchhhhHhHHHHHHHhcCce--EEEEEEEeeccccccccCCCCCCcccCCccCCCceeecC---CCh
Q 024565 141 EYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSS---TGA 215 (265)
Q Consensus 141 ~~~~~~~~Va~p~C~~ta~~~~L~pL~~~~~i~--~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~---~~~ 215 (265)
+++. +++|+|||||+|+++++|+||+++++|+ ++.+++++++||+++.....++.. +...|+.||. |.|
T Consensus 145 ~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~~~-----e~~~n~~~y~~~~h~h 218 (351)
T 1vkn_A 145 EIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYLFS-----EVNESLRPYNVAKHRH 218 (351)
T ss_dssp HHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGBHH-----HHTTCCEECSCSCCTH
T ss_pred Hhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccccchh-----HHhcccccCCcccccc
Confidence 9995 7999999999999999999999999998 889999999999866432111112 2334555555 556
Q ss_pred hhHHHhhccCC---CCceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 216 AKAVGKVLPAL---NGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 216 ~~~~~~~l~e~---~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
.+|+.+.+..+ ..+++|+|+|||++|||++++|++++ ++.+|++++|+
T Consensus 219 ~pEi~~el~~i~~~~~~v~ftp~rvPv~rG~~~tv~v~l~--~~~eei~~~l~ 269 (351)
T 1vkn_A 219 VPEMEQELGKISGKKVNVVFTPHLVPMTRGILSTIYVKTD--KSLEEIHEAYL 269 (351)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEEEEESSSSCEEEEEEEECS--SCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCEEEEEEEeccccEEEEEEEEEEc--CCHHHHHHHHH
Confidence 77766554432 24699999999999999999999998 89999998873
No 43
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.7e-37 Score=276.69 Aligned_cols=222 Identities=18% Similarity=0.267 Sum_probs=174.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
|+||||+|+|++|++++|+|.+||++|+++|++.. ....++++.++ + ++++...
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~--~~~~~~~a~~~---------------g---------~~~~~~~ 54 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTS--PNYEAFIAHRR---------------G---------IRIYVPQ 54 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSS--CSHHHHHHHHT---------------T---------CCEECCG
T ss_pred CeEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCC--hHHHHHHHHhc---------------C---------cceecCc
Confidence 48999999999999999999999999999999974 22222222111 0 0111101
Q ss_pred CCCCCCcc-------------cccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCCC--CceEEeeeccccccCCCC
Q 024565 83 NPEEIPWA-------------ETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD--APMFVVGVNEHEYKPELN 147 (265)
Q Consensus 83 ~~~~~~~~-------------~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~~--~~~~v~~vn~~~~~~~~~ 147 (265)
+++++ |. ..++|+||+|||++.+.+.++.++++|++.+++|++..+ .+++++++|.++..+ .+
T Consensus 55 ~~~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~ 132 (340)
T 1b7g_O 55 QSIKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KK 132 (340)
T ss_dssp GGHHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CS
T ss_pred CHHHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CC
Confidence 12111 21 136899999999999999999999999976667877433 368999999766653 57
Q ss_pred eEEcCCCchhhhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeec----CCChhhHHHhhc
Q 024565 148 IVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS----STGAAKAVGKVL 223 (265)
Q Consensus 148 ~Va~p~C~~ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~----~~~~~~~~~~~l 223 (265)
+|+||||++||++++|+||+++|||+++.+|++|+.. + + +.+ .+....|++|. ..++.+++.+++
T Consensus 133 iIsnpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~------~-~-~~~---~~~~~~niip~~~~i~t~~a~ev~~vl 201 (340)
T 1b7g_O 133 YIRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAA------D-Q-KEV---KKGPINSLVPDPATVPSHHAKDVNSVI 201 (340)
T ss_dssp EEEECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESS------C-T-TCC---SCCCSSCCEESSSSSSCTHHHHHHTTS
T ss_pred CcccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccC------C-c-ccc---hHHHHcCCCCCCcCCCCCchhHHHHhC
Confidence 9999999999999999999999999999999999753 2 2 112 34567788865 456889999999
Q ss_pred cCCCCceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHHHhC
Q 024565 224 PALNGKLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIK 265 (265)
Q Consensus 224 ~e~~~~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~~ 265 (265)
|+++ ++++++|||+++||+.+++++|+++++.|||+++|+
T Consensus 202 p~l~--l~~~a~rVPv~~gh~~~l~v~l~~~~t~eei~~~l~ 241 (340)
T 1b7g_O 202 RNLD--IATMAVIAPTTLMHMHFINITLKDKVEKKDILSVLE 241 (340)
T ss_dssp TTCE--EEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CCCc--EEEEEEEeccCCeEEEEEEEEECCCCCHHHHHHHHH
Confidence 9885 999999999999999999999999999999999874
No 44
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.5e-36 Score=271.59 Aligned_cols=230 Identities=25% Similarity=0.302 Sum_probs=184.8
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeec--ccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
||+||||+|+|++|++++|+|.+||++++++|++.. .+...++++++ ++|++|+ +.+....+ ..+.++
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~--~~~~~~~~~~~g~~~~~~~~-~~v~~~~~-------~~~~v~ 70 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTK--PDFEAYRAKELGIPVYAASE-EFIPRFEK-------EGFEVA 70 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESS--CSHHHHHHHHTTCCEEESSG-GGHHHHHH-------HTCCCS
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCC--HHHHHHHHHhcCcccccccc-ccceeccC-------CceEEc
Confidence 168999999999999999999999999999999974 33444455444 5566665 22100000 001111
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCCC-C-C-ceEEeeeccccccCCCCeEEcCCCch
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-D-A-PMFVVGVNEHEYKPELNIVSNASCTT 156 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~~-~-~-~~~v~~vn~~~~~~~~~~Va~p~C~~ 156 (265)
.+++++. .++|+||+|||++.+.+.++.++++|+ +|+++++.. | . +++||++|.++++. .++|+||+|++
T Consensus 71 --~d~~~l~---~~vDvV~~aTp~~~h~~~a~~~l~aGk-~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~t 143 (334)
T 2czc_A 71 --GTLNDLL---EKVDIIVDATPGGIGAKNKPLYEKAGV-KAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCNT 143 (334)
T ss_dssp --CBHHHHH---TTCSEEEECCSTTHHHHHHHHHHHHTC-EEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHHH
T ss_pred --CcHHHhc---cCCCEEEECCCccccHHHHHHHHHcCC-ceEeecccccccccceEEeccCHHHHhh-CCcEEecCcHH
Confidence 2334442 379999999999999999999999995 577777743 4 3 58999999998984 78999999999
Q ss_pred hhhHhHHHHHHHhcCceEEEEEEEeeccccccccCCCCCCcccCCccCCCceeec---CCChhhHHHhhccCCCCceeEE
Q 024565 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPS---STGAAKAVGKVLPALNGKLTGM 233 (265)
Q Consensus 157 ta~~~~L~pL~~~~~i~~~~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~---~~~~~~~~~~~l~e~~~~v~~~ 233 (265)
++++|++++|++. |+++.++++|++||. |++++..++|++|+ .+++.+++.+++| +. ++.+
T Consensus 144 ~~l~P~~~~l~~~--I~~g~i~ti~a~s~~-----------~~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~~~ 207 (334)
T 2czc_A 144 TGLVRTLSAIREY--ADYVYAVMIRRAADP-----------NDTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IETM 207 (334)
T ss_dssp HHHHHHHHHHGGG--EEEEEEEEEEESSCT-----------TCCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EEEE
T ss_pred HHHHHHHHHHHHH--hccccEEEEEEecCc-----------cccccChhhcEEeccCCCCchhhhhheEEE-EE--EEEE
Confidence 9999999999876 999999999999873 34567889999999 7789999999999 76 9999
Q ss_pred EEEeeeCceEEEEEEEEecCCCCHHHHHHHh
Q 024565 234 AFRVPTVDVSVVDLTVRLEKDASYDEIKAAI 264 (265)
Q Consensus 234 ~~~vP~~~G~~~~~~v~~~~~~~~e~v~~~~ 264 (265)
++|||+++||+.+++++++++++.||++++|
T Consensus 208 ~~rVPv~~~~~~~~~~~~~~~~~~e~i~~~~ 238 (334)
T 2czc_A 208 AFVVPTTLMHVHSVMVELKKPLTKDDVIDIF 238 (334)
T ss_dssp EEEESCSSCEEEEEEEEESSCCCHHHHHHHH
T ss_pred EEEcCCCceEEEEEEEEECCCCCHHHHHHHH
Confidence 9999999999999999999999999999986
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=99.23 E-value=4.3e-11 Score=105.54 Aligned_cols=209 Identities=17% Similarity=0.147 Sum_probs=117.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHc-CCCeEEEEEeccccC--hhhhhhheeecccCCcccccceeeeCCceEEECCEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFIT--TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~-~p~~el~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 77 (265)
|+++||||+|+|++|+.+++.|.+ +|++++++++++..+ ...++.. + | . .
T Consensus 2 ~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~------~------------g--~-------~ 54 (312)
T 1nvm_B 2 NQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR------M------------G--V-------T 54 (312)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH------T------------T--C-------C
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHH------c------------C--C-------C
Confidence 146999999999999999999977 899999999997522 2222100 0 1 0 0
Q ss_pred EEecCCCCCCCccc---ccccEEEEecCCcccHHhHHHHHhC--CCCeEEE-cCCCCCCceEEeeeccccccC--CCCeE
Q 024565 78 VFGVRNPEEIPWAE---TGAEYVVESTGVFTDKDKAAAHLKG--GAKKVII-SAPSKDAPMFVVGVNEHEYKP--ELNIV 149 (265)
Q Consensus 78 ~~~~~~~~~~~~~~---~~~DvV~~at~~~~~~~~~~~~~~~--G~~~vvi-s~~~~~~~~~v~~vn~~~~~~--~~~~V 149 (265)
.+. .+.+++ ... .++|+||+|||+..+.+++..++++ |+ ++++ +... -.|..++++|.+++.. ..+++
T Consensus 55 ~~~-~~~e~l-l~~~~~~~iDvV~~atp~~~h~~~a~~al~a~~Gk-~Vi~ekp~~-~g~~~~p~v~~~~~~~~~~~~lv 130 (312)
T 1nvm_B 55 TTY-AGVEGL-IKLPEFADIDFVFDATSASAHVQNEALLRQAKPGI-RLIDLTPAA-IGPYCVPVVNLEEHLGKLNVNMV 130 (312)
T ss_dssp EES-SHHHHH-HHSGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTC-EEEECSTTC-SSCBCCHHHHTTTTTTCSEEECC
T ss_pred ccc-CCHHHH-HhccCCCCCcEEEECCChHHHHHHHHHHHHhCCCC-EEEEcCccc-ccccccCccCHHHHHhccCCcEE
Confidence 000 112222 111 5699999999999999999999999 96 3444 3221 1344455677777642 12577
Q ss_pred EcCCCchhhhHhHHHHHHHhcCceEE-EEEEEeeccccccccCCCCCCcccCCccCCCceeecCCChhhHHHhhccCC-C
Q 024565 150 SNASCTTNCLAPLAKVIHDKFGIVEG-LMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPAL-N 227 (265)
Q Consensus 150 a~p~C~~ta~~~~L~pL~~~~~i~~~-~v~~v~~~sg~~~~~d~~~~~~~~~~~~~a~n~~p~~~~~~~~~~~~l~e~-~ 227 (265)
++++|...-+. ..+.+.+..... .+..+++.|. ++.. ....+-++.. ....+ +.+... .
T Consensus 131 a~~g~~~ipl~---~a~~~~~~~~~~~iv~~i~sgs~-G~~~------------~~~l~e~~~~--~~~ai-~~~gg~~~ 191 (312)
T 1nvm_B 131 TCGGQATIPMV---AAVSRVAKVHYAEIVASISSKSA-GPGT------------RANIDEFTET--TSKAI-EVIGGAAK 191 (312)
T ss_dssp CHHHHHHHHHH---HHHHTTSCEEEEEEEEEEEGGGS-CHHH------------HTCHHHHHHH--HHHHH-HHTTCCSS
T ss_pred EeCCcccchHH---HHhhhhccchhHhHhhhhhcccc-CCCc------------ccchhhHHHH--HHHHH-HHhhhccC
Confidence 78888554444 444343333322 1223322220 0000 0000001100 00111 122211 1
Q ss_pred C--ceeEEEEEeeeCceEEEEEEEEecCCCCHHHHHH
Q 024565 228 G--KLTGMAFRVPTVDVSVVDLTVRLEKDASYDEIKA 262 (265)
Q Consensus 228 ~--~v~~~~~~vP~~~G~~~~~~v~~~~~~~~e~v~~ 262 (265)
+ -+.|+|+..|++ +..++|+.++ ..+.+++.+
T Consensus 192 ~k~il~~~p~~~p~~--~~~tv~~~~~-~~~~~~~~~ 225 (312)
T 1nvm_B 192 GKAIIIMNPAEPPLI--MRDTVYVLSA-AADQAAVAA 225 (312)
T ss_dssp EEEEEEEECCSSCCC--EEEEEEEEES-SCCHHHHHH
T ss_pred CCcEEEEecCCCCcc--cceeEEEEeC-CCCHHHHHH
Confidence 1 267899999998 8889999997 777666544
No 46
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.98 E-value=6.6e-10 Score=100.03 Aligned_cols=93 Identities=18% Similarity=0.177 Sum_probs=66.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHc-------CCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEEC
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQ-------RDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~-------~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 72 (265)
|+++||||||+|.+|+.+++.+.. .|+++|++|+|+..+ .+.++. .| | +
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~---------~~---------g--~--- 79 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAG---------EF---------G--F--- 79 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHH---------HH---------T--C---
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHH---------Hh---------C--C---
Confidence 778999999999999998887654 467899999998543 222220 01 1 0
Q ss_pred CEEEEEEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 73 g~~~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.+ .|.+++ +++.++|+|+.|||+..+.+.+.+++++|+ +|++
T Consensus 80 ---~~~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~ 123 (393)
T 4fb5_A 80 ---EKAT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWC 123 (393)
T ss_dssp ---SEEE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred ---Ceec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEE
Confidence 0133 355555 445689999999999999999999999995 6666
No 47
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.98 E-value=5.1e-10 Score=99.81 Aligned_cols=92 Identities=18% Similarity=0.221 Sum_probs=68.5
Q ss_pred CccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
+|+||||||+|.+|+. ++.++.+.|+++|++|+|+..+ .+.++. .| | + .+.+
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~---------~~---------g--~------~~~y 75 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMAD---------RF---------S--V------PHAF 75 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHH---------HH---------T--C------SEEE
T ss_pred CccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH---------Hc---------C--C------Ceee
Confidence 4799999999999986 5788999999999999998533 222220 01 1 0 0233
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|.+++ ++++++|+|+.|||+..+.+.+.+++++|+ +|++
T Consensus 76 --~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~ 115 (350)
T 4had_A 76 --GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVC 115 (350)
T ss_dssp --SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred --CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEE
Confidence 355555 445679999999999999999999999995 6666
No 48
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.95 E-value=1.2e-09 Score=98.06 Aligned_cols=91 Identities=21% Similarity=0.333 Sum_probs=68.7
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+++||||+|+|.+|+. +++++.++|++++++|+++. ....+.. +. + .+.+
T Consensus 3 m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~~~---------~~--------~---------~~~~ 54 (358)
T 3gdo_A 3 LDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSR--TEEVKRD---------FP--------D---------AEVV 54 (358)
T ss_dssp TTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSC--HHHHHHH---------CT--------T---------SEEE
T ss_pred CCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCC--HHHHHhh---------CC--------C---------CceE
Confidence 45689999999999997 89999999999999999974 2222100 00 1 1233
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|++++ +++.++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 55 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 94 (358)
T 3gdo_A 55 --HELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAGK-HVVM 94 (358)
T ss_dssp --SSTHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTTC-EEEE
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcCC-eEEE
Confidence 355555 334579999999999999999999999995 6666
No 49
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.94 E-value=1.2e-09 Score=98.02 Aligned_cols=91 Identities=20% Similarity=0.315 Sum_probs=68.6
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+|+||||+|+|.+|+. +++++.++|+++|++|+++..+ ..+ . .|. + .+.+
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~--~~~------~---~~~--------~---------~~~~ 54 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKE--LSK------E---RYP--------Q---------ASIV 54 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCC--GGG------T---TCT--------T---------SEEE
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHH--HHH------H---hCC--------C---------CceE
Confidence 45689999999999997 8999999999999999997522 111 0 010 1 1233
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|.+++ ++..++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 55 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 94 (362)
T 3fhl_A 55 --RSFKEL-TEDPEIDLIVVNTPDNTHYEYAGMALEAGK-NVVV 94 (362)
T ss_dssp --SCSHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred --CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEE
Confidence 355555 334579999999999999999999999995 6666
No 50
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.93 E-value=3.9e-10 Score=101.41 Aligned_cols=93 Identities=15% Similarity=0.114 Sum_probs=68.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCC-------eEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEEC
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDD-------VELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~-------~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 72 (265)
|+++||||||+|.+|+.+++.+.+.|+ .+|++|+|+..+ .+.++. .| | +
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~---------~~---------g--~--- 60 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAG---------KL---------G--W--- 60 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHH---------HH---------T--C---
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHH---------Hc---------C--C---
Confidence 788999999999999999999988765 499999998533 121110 01 1 0
Q ss_pred CEEEEEEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 73 g~~~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
..++ .|.+++ +++.++|+|+.|||+..|.+++.+++++|+ +|++
T Consensus 61 ---~~~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~ 104 (390)
T 4h3v_A 61 ---STTE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAGK-HVLC 104 (390)
T ss_dssp ---SEEE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred ---Cccc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcCC-Ccee
Confidence 0223 345554 345689999999999999999999999994 6766
No 51
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.92 E-value=1.1e-09 Score=97.32 Aligned_cols=86 Identities=21% Similarity=0.247 Sum_probs=67.6
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~-~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+++||||+|+|.+|+ .+++.|.++|++++++|+++..+. .| ++.+
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------------------------~g---------~~~~ 69 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------------------------EG---------VNSY 69 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------------------------TT---------SEEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------------------------cC---------CCcc
Confidence 6679999999999999 799999999999999999874211 01 1222
Q ss_pred ecCCCCCCCccc-ccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAE-TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~-~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|.+++ ++. .++|+|+.|||+..+.+++.+++++|+ +|++
T Consensus 70 --~~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 110 (330)
T 4ew6_A 70 --TTIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAGK-HVFL 110 (330)
T ss_dssp --SSHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTTC-EEEE
T ss_pred --CCHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcCC-cEEE
Confidence 344444 333 579999999999999999999999994 6666
No 52
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.89 E-value=1.4e-09 Score=97.60 Aligned_cols=92 Identities=20% Similarity=0.317 Sum_probs=68.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+++||||+|+|.+|+.+++.|.++|++++++|+++..+....+ . ..| ++.+
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a------~------------~~g---------~~~~- 54 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAA------A------------QKG---------LKIY- 54 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHH------H------------TTT---------CCBC-
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH------H------------hcC---------Ccee-
Confidence 45689999999999999999999999999999999753221111 0 001 1122
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|++++ +.+.++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~ 94 (359)
T 3e18_A 55 -ESYEAV-LADEKVDAVLIATPNDSHKELAISALEAGK-HVVC 94 (359)
T ss_dssp -SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-CEEe
Confidence 344444 333579999999999999999999999995 5666
No 53
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.88 E-value=3e-09 Score=95.38 Aligned_cols=93 Identities=18% Similarity=0.254 Sum_probs=67.9
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+++||||||+|.+|+. +++.|.++|++++++|+|+..+. +.++ . .|. + .+.
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a------~---~~~--------~---------~~~ 56 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVH------R---FIS--------D---------IPV 56 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGG------G---TSC--------S---------CCE
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH------H---hcC--------C---------Ccc
Confidence 45689999999999996 89999999999999999984321 1111 0 010 0 112
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .|++++ .+..++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 57 ~--~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 97 (359)
T 3m2t_A 57 L--DNVPAM-LNQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFV 97 (359)
T ss_dssp E--SSHHHH-HHHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEE
T ss_pred c--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEE
Confidence 2 345554 333578999999999999999999999995 5666
No 54
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.88 E-value=2.4e-09 Score=94.81 Aligned_cols=93 Identities=18% Similarity=0.237 Sum_probs=66.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+|+||||+|+|.+|+.+++.|.+.|++++++|+++..+. +.++ ...+ + ...+
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a------------------~~~~--~------~~~~ 56 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFA------------------NKYH--L------PKAY 56 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---------------------CCC--C------SCEE
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH------------------HHcC--C------Cccc
Confidence 4568999999999999999999999999999999875331 1111 0001 0 0122
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++++ ..+.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 57 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~ 96 (329)
T 3evn_A 57 --DKLEDM-LADESIDVIYVATINQDHYKVAKAALLAGK-HVLV 96 (329)
T ss_dssp --SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred --CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEE
Confidence 344444 233579999999999999999999999995 5666
No 55
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.88 E-value=3.3e-09 Score=95.08 Aligned_cols=94 Identities=22% Similarity=0.209 Sum_probs=68.3
Q ss_pred CCccEEEEEccChhHHHHHHHHH-cCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~-~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+++||||||+|.+|+.+++.|. ++|++++++|+++..+. +.++.. + | + ....
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~------~------------g--~-----~~~~ 75 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDK------Y------------A--I-----EAKD 75 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHH------H------------T--C-----CCEE
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHH------h------------C--C-----CCee
Confidence 67899999999999999999999 78999999999985332 211100 0 0 0 0122
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .+++++ ....++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 76 ~--~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~ 116 (357)
T 3ec7_A 76 Y--NDYHDL-INDKDVEVVIITASNEAHADVAVAALNANK-YVFC 116 (357)
T ss_dssp E--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred e--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-CEEe
Confidence 2 344444 233579999999999999999999999995 5666
No 56
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.87 E-value=3e-09 Score=95.08 Aligned_cols=90 Identities=22% Similarity=0.426 Sum_probs=67.3
Q ss_pred CccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
+++||||+|+|.+|+. +++.+.++|++++++|+++. ..... . .+. + .+.+
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~--~~~~~------~---~~~--------~---------~~~~- 56 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSD--ASKVH------A---DWP--------A---------IPVV- 56 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSC--HHHHH------T---TCS--------S---------CCEE-
T ss_pred CCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCC--HHHHH------h---hCC--------C---------CceE-
Confidence 3589999999999997 89999999999999999974 22111 0 010 1 1122
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|++++ +...++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 57 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hV~~ 96 (352)
T 3kux_A 57 -SDPQML-FNDPSIDLIVIPTPNDTHFPLAQSALAAGK-HVVV 96 (352)
T ss_dssp -SCHHHH-HHCSSCCEEEECSCTTTHHHHHHHHHHTTC-EEEE
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEE
Confidence 345554 334579999999999999999999999994 6666
No 57
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.86 E-value=2.8e-09 Score=95.15 Aligned_cols=92 Identities=22% Similarity=0.322 Sum_probs=68.3
Q ss_pred ccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~-~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||||+|+|.+|+ .+++++.++|+++|++|+++. ..+.++.. ++. .+ ++.+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~------~~~---------~~---------~~~~-- 54 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAP------FKE---------KG---------VNFT-- 54 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHH------HHT---------TT---------CEEE--
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHh------hCC---------CC---------CeEE--
Confidence 69999999999998 789999999999999999975 33222210 000 01 1233
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++++ +...++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 55 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~ 94 (349)
T 3i23_A 55 ADLNEL-LTDPEIELITICTPAHTHYDLAKQAILAG-KSVIV 94 (349)
T ss_dssp SCTHHH-HSCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEE
Confidence 456555 33457999999999999999999999999 46666
No 58
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.86 E-value=2.4e-09 Score=95.71 Aligned_cols=92 Identities=11% Similarity=0.102 Sum_probs=67.3
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~-~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+++||||||+|.+|+ .+++.|.++|++++++|+++..+ .+.++. ..| ++.
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~------------------~~g---------~~~ 77 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTE------------------RFG---------GEP 77 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHH------------------HHC---------SEE
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHH------------------HcC---------CCC
Confidence 6679999999999998 79999999999999999997422 111110 001 112
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .+++++ +.+.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 78 ~--~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~ 118 (350)
T 3rc1_A 78 V--EGYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLA 118 (350)
T ss_dssp E--ESHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEE
T ss_pred c--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEE
Confidence 2 244444 233579999999999999999999999995 5666
No 59
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.86 E-value=3.9e-09 Score=94.06 Aligned_cols=91 Identities=14% Similarity=0.223 Sum_probs=66.8
Q ss_pred ccEEEEEccChhHHH-HHH-HHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRL-VAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~-l~~-~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+||||+|+|.+|+. +++ ++..+|++++++|+++..+....+ ..+ .+ ++.+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~---------~~~--------~~---------~~~~- 54 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQA---------PIY--------SH---------IHFT- 54 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGS---------GGG--------TT---------CEEE-
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHH---------Hhc--------CC---------CceE-
Confidence 699999999999995 788 667889999999999853321110 001 11 1233
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|++++ ++..++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~ 94 (345)
T 3f4l_A 55 -SDLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAGK-NVLV 94 (345)
T ss_dssp -SCTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred -CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcCC-cEEE
Confidence 455555 334579999999999999999999999994 6666
No 60
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.86 E-value=3.7e-09 Score=94.98 Aligned_cols=89 Identities=24% Similarity=0.315 Sum_probs=66.7
Q ss_pred ccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||||+|+|.+|+. +++++.++|+++|++|+++.. ..... .+. + .+.+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~---------~~~--------~---------~~~~-- 56 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDE--EKVKR---------DLP--------D---------VTVI-- 56 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCH--HHHHH---------HCT--------T---------SEEE--
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHHh---------hCC--------C---------CcEE--
Confidence 589999999999997 899999999999999999842 22110 010 1 1222
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|++++ +++.++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~H~~~~~~al~aGk-~Vl~ 96 (364)
T 3e82_A 57 ASPEAA-VQHPDVDLVVIASPNATHAPLARLALNAGK-HVVV 96 (364)
T ss_dssp SCHHHH-HTCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEE
Confidence 344444 333579999999999999999999999995 5666
No 61
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.84 E-value=8.8e-09 Score=91.01 Aligned_cols=89 Identities=20% Similarity=0.268 Sum_probs=68.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+++||||+|+|.+|+.+++.+.++|++++++++++.... .++ + | +..+
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~~-----------~---------g---------v~~~- 49 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DTK-----------T---------P---------VFDV- 49 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SSS-----------S---------C---------EEEG-
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hhc-----------C---------C---------Ccee-
Confidence 8889999999999999999999999999999999874221 100 0 1 2222
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcC
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~ 125 (265)
.|.+++- .++|+|++|+|+..+.+.+..++++|+ +++++.
T Consensus 50 -~d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ek 89 (320)
T 1f06_A 50 -ADVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTY 89 (320)
T ss_dssp -GGGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCC
T ss_pred -CCHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECC
Confidence 3445541 579999999999999999999999996 455543
No 62
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=98.84 E-value=1.1e-09 Score=94.57 Aligned_cols=97 Identities=26% Similarity=0.375 Sum_probs=66.2
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|.|+||+|+|+ |++|+.+++++.++|+++|+++.++..+.. .. .| .+.+. +. ..| +.++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~-~G----~d--~gel~-g~---~~g---------v~v~ 64 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQ-LG----QD--AGAFL-GK---QTG---------VALT 64 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTT-TT----SB--TTTTT-TC---CCS---------CBCB
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccc-cc----cc--HHHHh-CC---CCC---------ceec
Confidence 77899999997 999999999999999999999998752210 00 00 00000 00 001 2222
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|.+++ ..++|+||++|++..+.+.++.+++.|++ +|+
T Consensus 65 --~dl~~l---l~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVi 102 (272)
T 4f3y_A 65 --DDIERV---CAEADYLIDFTLPEGTLVHLDAALRHDVK-LVI 102 (272)
T ss_dssp --CCHHHH---HHHCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred --CCHHHH---hcCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 344443 14689999999999999999999999974 555
No 63
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.82 E-value=3.4e-09 Score=93.91 Aligned_cols=93 Identities=14% Similarity=0.156 Sum_probs=67.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+++||||+|+|.+|+.+++.|.++|++++++|+++..+. +.++. .+ | + ...+
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~------~~------------~--~------~~~~ 56 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAK------EL------------A--I------PVAY 56 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHH------HT------------T--C------CCCB
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHH------Hc------------C--C------Ccee
Confidence 4568999999999999999999999999999999985332 21110 00 1 0 0111
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|++++ ..+.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 57 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~ 96 (330)
T 3e9m_A 57 --GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQGK-PVLL 96 (330)
T ss_dssp --SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTTC-CEEE
T ss_pred --CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCCC-eEEE
Confidence 233443 223579999999999999999999999995 5666
No 64
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.81 E-value=3.8e-09 Score=94.43 Aligned_cols=91 Identities=13% Similarity=0.174 Sum_probs=67.1
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
+++||||+|+|.+|+.+++.|.++|++++++|+++..+ .+.++.. + | ++.+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~---------~---------g---------~~~~- 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKR---------Y---------N---------CAGD- 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHH---------H---------T---------CCCC-
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH---------c---------C---------CCCc-
Confidence 46899999999999999999999999999999998532 1111100 0 1 0111
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++++ ..+.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 56 -~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~ 95 (354)
T 3db2_A 56 -ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSGK-HIYV 95 (354)
T ss_dssp -SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTTC-EEEE
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcCC-EEEE
Confidence 234443 223579999999999999999999999995 5666
No 65
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.80 E-value=5.7e-09 Score=91.60 Aligned_cols=88 Identities=18% Similarity=0.210 Sum_probs=62.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+++||||+|+|.+|+.+++.|.++|++++++|+++..+. .. . + | + ....+
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~--~~------~----~---------g--~-----~~~~~- 57 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAE--VP------F----E---------L--Q-----PFRVV- 57 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-------------------C---------C--T-----TSCEE-
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHH--HH------H----c---------C--C-----CcCCH-
Confidence 4579999999999999999999999999999999874221 10 0 0 1 0 00011
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+..+. .++|+||+|||+..+.+.+..++++|+ ++++
T Consensus 58 -~~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ 94 (304)
T 3bio_A 58 -SDIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTAD 94 (304)
T ss_dssp -SSGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEE
T ss_pred -HHHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEE
Confidence 222222 579999999999999999999999996 4554
No 66
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.80 E-value=6.4e-09 Score=92.53 Aligned_cols=92 Identities=26% Similarity=0.428 Sum_probs=67.2
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~-~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+ |+||||+|+|.+|+.+++.|.++|++++++|+++..+. +.++ . .| | ...
T Consensus 1 M~~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a------~---~~---------g---------~~~ 53 (344)
T 3euw_A 1 MSLTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLA------E---AN---------G---------AEA 53 (344)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH------H---TT---------T---------CEE
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHH------H---Hc---------C---------Cce
Confidence 53 68999999999999999999999999999999975321 1111 0 00 1 122
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .+++++ +.+.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 54 ~--~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~ 94 (344)
T 3euw_A 54 V--ASPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERGI-PALC 94 (344)
T ss_dssp E--SSHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTTC-CEEE
T ss_pred e--CCHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcCC-cEEE
Confidence 2 344444 233579999999999999999999999995 5666
No 67
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.79 E-value=2.9e-09 Score=97.09 Aligned_cols=91 Identities=16% Similarity=0.177 Sum_probs=66.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCC--------CeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRD--------DVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p--------~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 73 (265)
++||||||+|.+|+.+++.+.+.+ +++|++|+|+..+ .+.++. .| | .
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~---------~~---------~------~ 81 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAA---------KL---------G------A 81 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHH---------HH---------T------C
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHH---------Hc---------C------C
Confidence 589999999999999999987653 6899999998533 222210 01 1 0
Q ss_pred EEEEEEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 74 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++ .|.+++ +++.++|+|+.|||+..+.+.+.+++++|+ +|++
T Consensus 82 --~~~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~ 125 (412)
T 4gqa_A 82 --EKAY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAGK-HVYC 125 (412)
T ss_dssp --SEEE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred --CeEE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcCC-CeEe
Confidence 1233 355555 445689999999999999999999999995 6666
No 68
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.78 E-value=8.4e-09 Score=95.08 Aligned_cols=100 Identities=24% Similarity=0.278 Sum_probs=68.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+++||||||+|.+|+.+++.|.++|++++++|+++..+ .+.++..+ ..+ | + . ..+++
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~------~~~---------g--~--~--~~~~~ 76 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEIL------KKN---------G--K--K--PAKVF 76 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHH------HHT---------T--C--C--CCEEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHH------Hhc---------C--C--C--CCcee
Confidence 567999999999999999999999999999999998532 12111000 000 0 0 0 01222
Q ss_pred e--cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 G--VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~--~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
. ..|++++ ++..++|+|+.|||+..+.+.+.+++++|+ +|++
T Consensus 77 ~~~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~ 120 (444)
T 2ixa_A 77 GNGNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGM 120 (444)
T ss_dssp CSSTTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEE
T ss_pred ccCCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEE
Confidence 1 0144444 333579999999999999999999999995 6666
No 69
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.78 E-value=8.7e-09 Score=91.69 Aligned_cols=92 Identities=22% Similarity=0.278 Sum_probs=67.2
Q ss_pred ccEEEEEccChhHHHHHHHHH-cCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~-~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+||||+|+|.+|+.+++.|. ++|++++++|+++..+ .+.++ ..+ | + ....+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~------~~~------------g--~-----~~~~~- 55 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVV------EQY------------Q--L-----NATVY- 55 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHH------HHT------------T--C-----CCEEE-
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHH------HHh------------C--C-----CCeee-
Confidence 589999999999999999999 7899999999998532 12111 001 1 0 01222
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++++ .+..++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 56 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~vl~ 95 (344)
T 3mz0_A 56 -PNDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQK-YVFC 95 (344)
T ss_dssp -SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred -CCHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCCC-cEEE
Confidence 344444 233569999999999999999999999995 6666
No 70
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.77 E-value=7.8e-09 Score=91.99 Aligned_cols=91 Identities=23% Similarity=0.348 Sum_probs=67.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||||||+|.+|+.+++.|.++|++++++|+++..+. +.++. .+ + + ...+
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~---------~~---------~--~------~~~~-- 53 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKE---------KL---------G--V------EKAY-- 53 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHH---------HH---------T--C------SEEE--
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH---------Hh---------C--C------Ccee--
Confidence 68999999999999999999999999999999985321 11110 00 1 0 0122
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|++++ +.+.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 54 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~ 93 (344)
T 3ezy_A 54 KDPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAKK-HVFC 93 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcCC-eEEE
Confidence 344444 233579999999999999999999999995 5666
No 71
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.76 E-value=7.7e-09 Score=91.52 Aligned_cols=89 Identities=27% Similarity=0.359 Sum_probs=67.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||||+|+|.+|+.+++.|.++|++++++|+++..+. +.++. ..| ++ +
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~------------------~~~---------~~-~-- 52 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAG------------------AYG---------CE-V-- 52 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH------------------HTT---------CE-E--
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHH------------------HhC---------CC-c--
Confidence 68999999999999999999999999999999985321 11110 011 12 2
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++++ +.+.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 53 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~ 92 (331)
T 4hkt_A 53 RTIDAI-EAAADIDAVVICTPTDTHADLIERFARAGK-AIFC 92 (331)
T ss_dssp CCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcCC-cEEE
Confidence 344444 233479999999999999999999999994 5666
No 72
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.76 E-value=6.5e-09 Score=92.88 Aligned_cols=91 Identities=19% Similarity=0.203 Sum_probs=67.9
Q ss_pred CccEEEEEccChhHHHHHHHHHcC-CCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 2 GKVKIGINGFGRIGRLVARVILQR-DDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
+|+||||+|+|.+|+.+++.|.++ |++++++|+++..+. +.++. ..| ++.+
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~------------------~~~---------~~~~ 64 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVE------------------RTG---------ARGH 64 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHH------------------HHC---------CEEE
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHH------------------HcC---------Ccee
Confidence 468999999999999999999998 899999999985321 11110 001 1233
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|++++ +++.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 65 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~ 104 (354)
T 3q2i_A 65 --ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAGF-HVMT 104 (354)
T ss_dssp --SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred --CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-CEEE
Confidence 345554 333579999999999999999999999994 5666
No 73
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.75 E-value=4.1e-09 Score=92.33 Aligned_cols=90 Identities=17% Similarity=0.286 Sum_probs=66.0
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+++||||+|+|.+|+. +++.|.++|++++++|+++..+ .+.++. .+ | ++.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~---------~~---------~---------~~~ 56 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICS---------DY---------R---------IMP 56 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHH---------HH---------T---------CCB
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH---------Hc---------C---------CCC
Confidence 66799999999999996 9999999999999999998533 121110 00 1 011
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .+++++ . .++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 57 ~--~~~~~l-l--~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~ 95 (308)
T 3uuw_A 57 F--DSIESL-A--KKCDCIFLHSSTETHYEIIKILLNLGV-HVYV 95 (308)
T ss_dssp C--SCHHHH-H--TTCSEEEECCCGGGHHHHHHHHHHTTC-EEEE
T ss_pred c--CCHHHH-H--hcCCEEEEeCCcHhHHHHHHHHHHCCC-cEEE
Confidence 1 344444 1 379999999999999999999999995 5666
No 74
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=98.74 E-value=1.2e-08 Score=88.95 Aligned_cols=86 Identities=17% Similarity=0.217 Sum_probs=65.3
Q ss_pred CccEEEEEccChhHHHHHHHHHc---CCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 2 GKVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~---~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
+|+||||+|+|.+|+.+++.+.+ ++++++++|+++....+ ..| ++
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a~----------------------~~g---------~~- 53 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGS----------------------LDE---------VR- 53 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCE----------------------ETT---------EE-
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHHH----------------------HcC---------CC-
Confidence 47899999999999999999987 68899999998631110 011 11
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .+++++ .++.++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 54 ~--~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 94 (294)
T 1lc0_A 54 Q--ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLV 94 (294)
T ss_dssp B--CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred C--CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEE
Confidence 1 244444 233579999999999999999999999995 6666
No 75
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.74 E-value=1.3e-08 Score=90.29 Aligned_cols=91 Identities=20% Similarity=0.222 Sum_probs=66.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCC--CeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRD--DVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p--~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+||||+|+|.+|+.+++.|.+.| ++++++|+++..+ .+.++. .| | + ...+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~---------~~---------~--~------~~~~ 55 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQ---------KH---------D--I------PKAY 55 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHH---------HH---------T--C------SCEE
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHH---------Hc---------C--C------Cccc
Confidence 699999999999999999999877 4899999998532 122110 00 1 0 0122
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|.+++ ..+.++|+|+.|||+..+.+.+..++++| |+|++
T Consensus 56 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~ 95 (334)
T 3ohs_X 56 --GSYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLC 95 (334)
T ss_dssp --SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEE
T ss_pred --CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEE
Confidence 344444 33357999999999999999999999999 46666
No 76
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.73 E-value=1.3e-08 Score=91.27 Aligned_cols=96 Identities=13% Similarity=0.200 Sum_probs=67.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+++||||+|+|.+|+.+++.|.++|++++++|+++..+. +.++ ..++.. .+ ...+
T Consensus 4 ~~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a------~~~~~~--------~~---------~~~~ 60 (362)
T 1ydw_A 4 ETQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFA------TANNYP--------ES---------TKIH 60 (362)
T ss_dssp --CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH------HHTTCC--------TT---------CEEE
T ss_pred CCceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHH------HHhCCC--------CC---------Ceee
Confidence 3568999999999999999999999999999999975321 1111 001000 00 1222
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++++ +.+.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 61 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~ 100 (362)
T 1ydw_A 61 --GSYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILL 100 (362)
T ss_dssp --SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEE
T ss_pred --CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEE
Confidence 244444 223469999999999999999999999995 5666
No 77
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.71 E-value=2.1e-08 Score=92.23 Aligned_cols=97 Identities=12% Similarity=0.075 Sum_probs=68.6
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~-~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+++||||||+|.+|+ .+++.|.+++++++++|+++..+ .+.++ ..++.- ...+..
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a------~~~g~~----------------~~~~~~ 138 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVA------AEYGVD----------------PRKIYD 138 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHH------HHTTCC----------------GGGEEC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHH------HHhCCC----------------cccccc
Confidence 5679999999999997 89999999999999999997532 11111 001000 000112
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .|.+++ .++.++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 139 ~--~~~~~l-l~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~ 179 (433)
T 1h6d_A 139 Y--SNFDKI-AKDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMC 179 (433)
T ss_dssp S--SSGGGG-GGCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred c--CCHHHH-hcCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEE
Confidence 2 345555 333579999999999999999999999995 5666
No 78
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.68 E-value=2.7e-08 Score=84.43 Aligned_cols=81 Identities=16% Similarity=0.230 Sum_probs=58.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+|+||+|+|+|++|+.+++++.++++ +|+++.++..+.. .| ++++
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~~~-----------------------~g---------v~v~- 46 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPKAT-----------------------TP---------YQQY- 46 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC-------------------------CC---------SCBC-
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCcccc-----------------------CC---------Ccee-
Confidence 778999999999999999999999999 9999998742210 01 1222
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|++++ . ++|+|+++|.+....+.++ ++.|+. +|+
T Consensus 47 -~dl~~l---~-~~DVvIDft~p~a~~~~~~--l~~g~~-vVi 81 (243)
T 3qy9_A 47 -QHIADV---K-GADVAIDFSNPNLLFPLLD--EDFHLP-LVV 81 (243)
T ss_dssp -SCTTTC---T-TCSEEEECSCHHHHHHHHT--SCCCCC-EEE
T ss_pred -CCHHHH---h-CCCEEEEeCChHHHHHHHH--HhcCCc-eEe
Confidence 456665 2 6899999888777777775 788874 444
No 79
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.67 E-value=2.3e-08 Score=88.66 Aligned_cols=92 Identities=13% Similarity=0.158 Sum_probs=63.3
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~-~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+++||||||+|.+|. .+++.|. ++++++++|+|+..+ .+.++. .++ + .+.
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~~~~~~~~~a~------~~~-----------~---------~~~ 54 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFESDSDNRAKFTS------LFP-----------S---------VPF 54 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECSCTTSCHHHHH------HST-----------T---------CCB
T ss_pred CCccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCCCHHHHHHHHH------hcC-----------C---------Ccc
Confidence 7789999999999996 6777775 578999999998533 222210 010 0 011
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .|++++ +++.++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 55 ~--~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~ 95 (336)
T 2p2s_A 55 A--ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFT 95 (336)
T ss_dssp C--SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred c--CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEE
Confidence 1 234443 233579999999999999999999999995 6666
No 80
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=98.67 E-value=3.8e-08 Score=86.57 Aligned_cols=90 Identities=20% Similarity=0.283 Sum_probs=65.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||||||+ |++|+.+++.+.+. ++++++|+|+..+....+ . .+. + .+.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~~~------~---~~~--------~---------~~~~-- 53 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVGLVD------S---FFP--------E---------AEFF-- 53 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGGGG------G---TCT--------T---------CEEE--
T ss_pred ceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHHHHH------h---hCC--------C---------Ccee--
Confidence 699999999 89999999999987 589999999853322111 1 011 1 1233
Q ss_pred CCCCCCCc--------ccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPW--------AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~--------~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.+++ + ++.++|+|+.|||+..+.+++.+++++|+ +|++
T Consensus 54 ~~~~~l-l~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~ 101 (312)
T 3o9z_A 54 TEPEAF-EAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGA-NALS 101 (312)
T ss_dssp SCHHHH-HHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCHHHH-HHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCCC-eEEE
Confidence 234443 2 24679999999999999999999999995 6666
No 81
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.66 E-value=4.6e-08 Score=86.23 Aligned_cols=90 Identities=21% Similarity=0.310 Sum_probs=66.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||||+|+|.+|+.+++.|.++|++++++|+++..+. ..++ . .+ | . ...+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~------~---~~---------~--~------~~~~-- 52 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFA------S---RY---------Q--N------IQLF-- 52 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHG------G---GS---------S--S------CEEE--
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHH------H---Hc---------C--C------CeEe--
Confidence 48999999999999999999999999999999874321 1111 0 00 1 0 1122
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++++ . +.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 53 ~~~~~~-l-~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~ 91 (325)
T 2ho3_A 53 DQLEVF-F-KSSFDLVYIASPNSLHFAQAKAALSAGK-HVIL 91 (325)
T ss_dssp SCHHHH-H-TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCHHHH-h-CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEE
Confidence 344444 2 3579999999999999999999999995 5666
No 82
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.66 E-value=2.5e-08 Score=87.73 Aligned_cols=90 Identities=18% Similarity=0.273 Sum_probs=64.6
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+++||||+|+|.+|+. +++.|.++|++++++|+++..+. +.++.. + | ++.
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~---------~---------g---------~~~ 55 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICES---------W---------R---------IPY 55 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHH---------H---------T---------CCB
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH---------c---------C---------CCc
Confidence 44689999999999996 99999989999999999975332 211100 0 1 011
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .+.+++ ..++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 56 ~--~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~ 94 (319)
T 1tlt_A 56 A--DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCV 94 (319)
T ss_dssp C--SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEE
T ss_pred c--CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEE
Confidence 1 233333 2579999999999999999999999995 5555
No 83
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.66 E-value=1.9e-08 Score=90.28 Aligned_cols=92 Identities=15% Similarity=0.220 Sum_probs=63.2
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+++||||+|+|.+|.. ++..+. +|+++|++|+|+..+. +.++ ..++ . .+.
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~~~~~a~~~a------~~~~-----------~---------~~~ 76 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEKDDALAAEFS------AVYA-----------D---------ARR 76 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECSCHHHHHHHH------HHSS-----------S---------CCE
T ss_pred ccCcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcCCHHHHHHHH------HHcC-----------C---------Ccc
Confidence 45689999999999964 566655 6899999999985321 2221 0010 0 112
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .|.+++ +++.++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 77 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~ 117 (361)
T 3u3x_A 77 I--ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHGK-DVLV 117 (361)
T ss_dssp E--SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred c--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEE
Confidence 2 344444 334579999999999999999999999995 6666
No 84
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.65 E-value=3.6e-08 Score=87.57 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=65.9
Q ss_pred CccEEEEEccChhHHHHHHHHH-cCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~-~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
+++||||+|+|.+|+.+++.|. +++++++++|+++..+. +.++ . .+ | . ..++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a------~---~~---------g--~------~~~~ 60 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAK------N---EL---------G--V------ETTY 60 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHH------H---TT---------C--C------SEEE
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHH------H---Hh---------C--C------Cccc
Confidence 4689999999999999999998 78999999999875321 1111 0 00 1 0 0122
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++++ .+..++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 61 --~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~ 100 (346)
T 3cea_A 61 --TNYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAGL-NVFC 100 (346)
T ss_dssp --SCHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred --CCHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCCC-EEEE
Confidence 233333 222479999999999999999999999995 5655
No 85
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.64 E-value=2.7e-08 Score=87.41 Aligned_cols=90 Identities=18% Similarity=0.204 Sum_probs=66.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
+++||||+|+|.+|+.+++.|.++|++++++++++..+ .... +. . + ++.+
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~--~~~~----------~~--------~-------~-~~~~-- 58 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPD--NLAL----------VP--------P-------G-CVIE-- 58 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHH--HHTT----------CC--------T-------T-CEEE--
T ss_pred CcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHH--HHHH----------HH--------h-------h-Cccc--
Confidence 36899999999999999999999999999999997422 1110 00 0 0 1222
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++++ .++.++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 59 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~ 98 (315)
T 3c1a_A 59 SDWRSV-VSAPEVEAVIIATPPATHAEITLAAIASGK-AVLV 98 (315)
T ss_dssp SSTHHH-HTCTTCCEEEEESCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCHHHH-hhCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEE
Confidence 344444 223479999999999999999999999995 5665
No 86
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.63 E-value=3.5e-08 Score=87.73 Aligned_cols=91 Identities=21% Similarity=0.181 Sum_probs=67.4
Q ss_pred ccEEEEEccC-hhHHHHHHHHHcC-CCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 3 KVKIGINGFG-RIGRLVARVILQR-DDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 3 ~i~vgI~G~G-~~G~~l~~~L~~~-p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
++||||+|+| .+|+.+++.|.+. |++++++|+|+..+ .+.++. .| + + .+++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~---------~~---------~--~------~~~~ 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAK---------MV---------G--N------PAVF 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHH---------HH---------S--S------CEEE
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHH---------Hh---------C--C------Cccc
Confidence 6899999999 8999999999998 89999999998532 111110 00 1 0 1223
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|.+++ +++.++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 72 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 111 (340)
T 1zh8_A 72 --DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKGV-HVIC 111 (340)
T ss_dssp --SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTTC-EEEE
T ss_pred --CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCCC-cEEE
Confidence 345444 334579999999999999999999999995 6666
No 87
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=98.63 E-value=5.1e-08 Score=89.40 Aligned_cols=109 Identities=13% Similarity=0.267 Sum_probs=68.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCC-cccccceeeeCC-ceEE---ECCEE
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHG-QWKHHELKVKDD-KTLL---FGEKP 75 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~l~---~~g~~ 75 (265)
+++||||+|+|.+|+.+++.+.+.|++++++|+|+..+. +..+ ...|+ .+. +...+. ..+. -.+ .
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a-----~~~yG~~~~---~~~~~~~~~i~~a~~~g-~ 92 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAI-----RTAYGDEEN---AREATTESAMTRAIEAG-K 92 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHH-----HHHHSSSTT---EEECSSHHHHHHHHHTT-C
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHH-----HHhcCCccc---cccccchhhhhhhhccC-C
Confidence 469999999999999999999999999999999985332 1111 00001 010 000000 0000 000 1
Q ss_pred EEEEecCCCCCCCcccccccEEEEecCC-cccHHhHHHHHhCCCCeEEE
Q 024565 76 VTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~DvV~~at~~-~~~~~~~~~~~~~G~~~vvi 123 (265)
..++ .|.+++ +++.++|+|++|||+ ..+.+++..++++|+ +|++
T Consensus 93 ~~v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK-HVv~ 137 (446)
T 3upl_A 93 IAVT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK-HLVM 137 (446)
T ss_dssp EEEE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred ceEE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC-cEEe
Confidence 2333 455555 344679999999987 467899999999995 5654
No 88
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=98.62 E-value=5.9e-08 Score=85.55 Aligned_cols=91 Identities=22% Similarity=0.184 Sum_probs=65.8
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||||||+ |++|..+++.+.+. +.++++++|+..+...++ .. ++ + .+.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~~~------~~---~~--------~---------~~~~-- 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVGIID------SI---SP--------Q---------SEFF-- 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGGGG------GT---CT--------T---------CEEE--
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHHHHH------hh---CC--------C---------CcEE--
Confidence 699999999 89999999999987 699999999853322111 10 11 1 1222
Q ss_pred CCCCCCC-----c---ccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIP-----W---AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~-----~---~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.+++. | .+.++|+|+.|||+..+.+++.+++++|+ +|++
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~ 102 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGC-DVIC 102 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCC-eEEE
Confidence 2333330 0 13679999999999999999999999995 6666
No 89
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.62 E-value=1.6e-08 Score=91.45 Aligned_cols=90 Identities=20% Similarity=0.286 Sum_probs=67.5
Q ss_pred ccEEEEEccC-hhHHHHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFG-RIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G-~~G~~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
++||||+|+| .+|..+++.|.++|++++++|+++..+ .+.++. .-| ++.+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~------------------~~g---------~~~~- 53 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGK------------------EYG---------IPVF- 53 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHH------------------HHT---------CCEE-
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHH------------------HcC---------CCeE-
Confidence 6999999999 999999999999999999999997422 111110 001 1222
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|.+++ ++..++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 54 -~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-~Vl~ 93 (387)
T 3moi_A 54 -ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQGL-HIIV 93 (387)
T ss_dssp -SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred -CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-ceee
Confidence 345554 334579999999999999999999999995 6666
No 90
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=98.61 E-value=2.5e-08 Score=86.55 Aligned_cols=94 Identities=22% Similarity=0.185 Sum_probs=65.7
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccC---hhhhhhheeecccCCcccccceeeeCCceEEECCEEEE
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFIT---TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 77 (265)
+|+||+|+|+ |+||+.+++++.++|+++|+++.++... +.... .+ .| + ....++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~g----------el--------~G--~--~~~gv~ 77 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDAS----------IL--------IG--S--DFLGVR 77 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGG----------GG--------TT--C--SCCSCB
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchH----------Hh--------hc--c--CcCCce
Confidence 3689999996 9999999999999999999999987522 11111 00 00 0 000123
Q ss_pred EEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
++ .|++++ ..++|+|+++|++..+.+.+..+++.|+. +|+
T Consensus 78 v~--~dl~~l---l~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 78 IT--DDPESA---FSNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp CB--SCHHHH---TTSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred ee--CCHHHH---hcCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 32 345544 14799999999999999999999999974 444
No 91
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=98.61 E-value=1.7e-07 Score=83.04 Aligned_cols=87 Identities=21% Similarity=0.251 Sum_probs=64.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC--------CeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEEC
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRD--------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p--------~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 72 (265)
|+++||||+|+|.+|+.+++.|.+++ ++++++|+++...-. . .+. ..
T Consensus 1 Mk~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~---------~---~~~-------~~------ 55 (332)
T 2ejw_A 1 MEALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP---------R---AIP-------QE------ 55 (332)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC---------C---SSC-------GG------
T ss_pred CCeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh---------h---ccC-------cc------
Confidence 77899999999999999999999987 799999998742110 0 000 00
Q ss_pred CEEEEEEecCCCCCCCcccccccEEEEecCCcc-cHHhHHHHHhCCCCeEEE
Q 024565 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFT-DKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 73 g~~~~~~~~~~~~~~~~~~~~~DvV~~at~~~~-~~~~~~~~~~~G~~~vvi 123 (265)
..+ .|++++ . ++|+|++|||+.. +.+++.+++++|+ +||+
T Consensus 56 ----~~~--~d~~~l-l---~iDvVve~t~~~~~a~~~~~~AL~aGK-hVVt 96 (332)
T 2ejw_A 56 ----LLR--AEPFDL-L---EADLVVEAMGGVEAPLRLVLPALEAGI-PLIT 96 (332)
T ss_dssp ----GEE--SSCCCC-T---TCSEEEECCCCSHHHHHHHHHHHHTTC-CEEE
T ss_pred ----ccc--CCHHHH-h---CCCEEEECCCCcHHHHHHHHHHHHcCC-eEEE
Confidence 022 467777 1 7999999999874 5678889999996 5555
No 92
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=98.60 E-value=5.8e-08 Score=89.20 Aligned_cols=91 Identities=16% Similarity=0.304 Sum_probs=65.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC---------CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQR---------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF 71 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~---------p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 71 (265)
|+++||||+|+|.+|+.+++.|.+| +++++++|+++.... ..... .+
T Consensus 8 Mk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~--~~~~~-----------------~~----- 63 (444)
T 3mtj_A 8 MKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDK--AEALA-----------------GG----- 63 (444)
T ss_dssp CSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHH--HHHHH-----------------TT-----
T ss_pred hCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHH--hhhhc-----------------cc-----
Confidence 4568999999999999999988753 789999999974221 11000 00
Q ss_pred CCEEEEEEecCCCCCCCcccccccEEEEecCC-cccHHhHHHHHhCCCCeEEE
Q 024565 72 GEKPVTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 72 ~g~~~~~~~~~~~~~~~~~~~~~DvV~~at~~-~~~~~~~~~~~~~G~~~vvi 123 (265)
...+ .|++++ +.+.++|+|++|||+ ..+.+++..++++|+ +|++
T Consensus 64 ----~~~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvt 108 (444)
T 3mtj_A 64 ----LPLT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVT 108 (444)
T ss_dssp ----CCEE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEE
T ss_pred ----Cccc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEE
Confidence 0122 345444 334679999999996 889999999999995 5555
No 93
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.56 E-value=2.5e-08 Score=90.55 Aligned_cols=95 Identities=19% Similarity=0.136 Sum_probs=65.8
Q ss_pred CCccEEEEEccCh---hHHHHHHHHHcCCCeEEEE-EeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEE
Q 024565 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (265)
Q Consensus 1 m~~i~vgI~G~G~---~G~~l~~~L~~~p~~el~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 75 (265)
|+++||||||+|. +|+.+++.+...+++++++ |+|+..+ .+.++.. ++.- .
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~------~g~~------------------~ 65 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQ------LGVD------------------S 65 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHH------TTCC------------------G
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHH------hCCC------------------c
Confidence 5678999999999 9999999999999999998 7887432 1221100 1000 0
Q ss_pred EEEEecCCCCCCCccc-----ccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 76 VTVFGVRNPEEIPWAE-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 76 ~~~~~~~~~~~~~~~~-----~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.+ .|.+++ ++. .++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 66 ~~~~--~~~~~l-l~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 114 (398)
T 3dty_A 66 ERCY--ADYLSM-FEQEARRADGIQAVSIATPNGTHYSITKAALEAGL-HVVC 114 (398)
T ss_dssp GGBC--SSHHHH-HHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEE
T ss_pred ceee--CCHHHH-HhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEE
Confidence 0011 233333 111 359999999999999999999999995 6666
No 94
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=98.55 E-value=1.9e-08 Score=89.24 Aligned_cols=93 Identities=10% Similarity=0.085 Sum_probs=65.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecccc--ChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+||||+|+|.+|..+++.+ +|++++++|+|+.. ..+.++... ..| | + ..+.+
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~------~~~---------~--~-----~~~~~- 56 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAI------SEM---------N--I-----KPKKY- 56 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHH------HTT---------T--C-----CCEEC-
T ss_pred ceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHH------HHc---------C--C-----CCccc-
Confidence 69999999988888888887 88999999999753 122222110 001 1 0 01233
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.|.+++ +++.++|+|+.|||+..+.+.+.+++++|+ +|++
T Consensus 57 -~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~ 96 (337)
T 3ip3_A 57 -NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFV 96 (337)
T ss_dssp -SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEE
T ss_pred -CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEE
Confidence 355555 344679999999999999999999999995 5666
No 95
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.54 E-value=8.2e-08 Score=87.77 Aligned_cols=95 Identities=25% Similarity=0.263 Sum_probs=65.3
Q ss_pred CCccEEEEEccCh---hHHHHHHHHHcCCCeEEEE-EeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEE
Q 024565 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (265)
Q Consensus 1 m~~i~vgI~G~G~---~G~~l~~~L~~~p~~el~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 75 (265)
|+++||||||+|. +|+.+++.+...+++++++ |+++..+ .+.++.. + | + . .
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~------~------------g--~--~--~ 90 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRE------L------------G--L--D--P 90 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHH------H------------T--C--C--G
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH------c------------C--C--C--c
Confidence 4568999999998 9999999999999999997 8887432 1221100 0 0 0 0 0
Q ss_pred EEEEecCCCCCCCccc-----ccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 76 VTVFGVRNPEEIPWAE-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 76 ~~~~~~~~~~~~~~~~-----~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++ .|++++ ++. .++|+|+.|||+..+.+.+.+++++|+ +|++
T Consensus 91 ~~~~--~~~~~l-l~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~ 139 (417)
T 3v5n_A 91 SRVY--SDFKEM-AIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVIC 139 (417)
T ss_dssp GGBC--SCHHHH-HHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEE
T ss_pred cccc--CCHHHH-HhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEE
Confidence 0111 233443 222 459999999999999999999999995 5666
No 96
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.54 E-value=2.1e-07 Score=82.22 Aligned_cols=104 Identities=20% Similarity=0.215 Sum_probs=62.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC------CCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQR------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~------p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 74 (265)
|+++||||+|+|.+|+.+++.|.++ ++++|++|+++....... . + |. ..+. .. ....+ .+ ..
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~-~-i--dl--~~~~-~~-~~~~g-~~--~~- 69 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGR-N-L--DI--SSII-SN-KEKTG-RI--SD- 69 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECS-S-C--CH--HHHH-HH-HHHHS-CS--CS-
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhccc-c-c--CH--HHHH-HH-hhhcC-CC--Cc-
Confidence 7889999999999999999999876 789999999874321000 0 0 00 0000 00 00000 00 00
Q ss_pred EEEEEecCCCCCCCcccccccEEEEecCCccc----HHhHHHHHhCCCCeEEE
Q 024565 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVII 123 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~----~~~~~~~~~~G~~~vvi 123 (265)
. . .+.+++ ..+.++|+|++|||+..+ .+++..++++|+ +||.
T Consensus 70 -~-~---~d~~e~-l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGk-hVVt 115 (325)
T 3ing_A 70 -R-A---FSGPED-LMGEAADLLVDCTPASRDGVREYSLYRMAFESGM-NVVT 115 (325)
T ss_dssp -S-B---CCSGGG-GTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTC-EEEE
T ss_pred -c-c---CCHHHH-hcCCCCCEEEECCCCccccchHHHHHHHHHHCCC-eEEE
Confidence 0 0 123333 234679999999998644 478999999996 4544
No 97
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=98.54 E-value=5.7e-08 Score=86.22 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=63.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC-------CeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECC
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRD-------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p-------~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 73 (265)
|+++||||+|+|.+|+.+++.|.+++ ++++++|+++......-. + + ...|. .. ...+ +
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~--~--~--~~~~~-~~--~~~~------~ 68 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNER--I--D--IGKVI-SY--KEKG------S 68 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTT--C--C--HHHHH-HH--HHTT------C
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcc--c--C--hHHHh-hh--hccC------C
Confidence 44689999999999999999998876 699999998753211000 0 0 00000 00 0000 0
Q ss_pred EEEE-EEe-cCCCCCCCcccccccEEEEecCCc----ccHHhHHHHHhCCCCeEEE
Q 024565 74 KPVT-VFG-VRNPEEIPWAETGAEYVVESTGVF----TDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 74 ~~~~-~~~-~~~~~~~~~~~~~~DvV~~at~~~----~~~~~~~~~~~~G~~~vvi 123 (265)
++ ++. ..|++++ . +.++|+|++|||+. .+.+++.+++++|+ +||+
T Consensus 69 --~~~~~~~~~d~~~l-l-~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGk-hVvt 119 (331)
T 3c8m_A 69 --LDSLEYESISASEA-L-ARDFDIVVDATPASADGKKELAFYKETFENGK-DVVT 119 (331)
T ss_dssp --GGGCCSEECCHHHH-H-HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTC-EEEE
T ss_pred --cccccCCCCCHHHH-h-CCCCCEEEECCCCCCccchHHHHHHHHHHCCC-eEEe
Confidence 00 000 0134444 2 35799999999996 77889999999996 5554
No 98
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.53 E-value=6e-08 Score=90.25 Aligned_cols=96 Identities=16% Similarity=0.178 Sum_probs=69.1
Q ss_pred CCccEEEEEcc----ChhHHHHHHHHHcC-CCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCE
Q 024565 1 MGKVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (265)
Q Consensus 1 m~~i~vgI~G~----G~~G~~l~~~L~~~-p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 74 (265)
|+++||||||+ |.+|+.+++.|.+. |+++|++|+++..+ .+.++. .+ | + .
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~------~~------------g--~--~-- 92 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIE------QL------------Q--L--K-- 92 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHH------HT------------T--C--T--
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHH------Hc------------C--C--C--
Confidence 44689999999 99999999999998 89999999997532 111110 00 1 0 0
Q ss_pred EEEEEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCC-----CeEEE
Q 024565 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVII 123 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~-----~~vvi 123 (265)
....+ .|++++ .++.++|+|+.|||+..+.+.+..++++|. |+|++
T Consensus 93 ~~~~~--~d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~ 143 (479)
T 2nvw_A 93 HATGF--DSLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYV 143 (479)
T ss_dssp TCEEE--SCHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEE
T ss_pred cceee--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEE
Confidence 01122 344444 333579999999999999999999999993 56777
No 99
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.53 E-value=3.6e-08 Score=90.71 Aligned_cols=95 Identities=18% Similarity=0.216 Sum_probs=68.4
Q ss_pred CccEEEEEcc----ChhHHHHHHHHHcC-CCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEE
Q 024565 2 GKVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (265)
Q Consensus 2 ~~i~vgI~G~----G~~G~~l~~~L~~~-p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 75 (265)
+++||||||+ |.+|+.+++.|.++ |++++++|+++..+ .+.++ ..+ | + . .
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a------~~~------------g--~--~--~ 74 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATI------QRL------------K--L--S--N 74 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHH------HHT------------T--C--T--T
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHH------HHc------------C--C--C--c
Confidence 3589999999 99999999999999 99999999997532 11111 000 1 0 0 0
Q ss_pred EEEEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCC-----CeEEE
Q 024565 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVII 123 (265)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~-----~~vvi 123 (265)
...+ .|++++ +...++|+|+.|||+..+.+.+..++++|. |+|++
T Consensus 75 ~~~~--~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~ 124 (438)
T 3btv_A 75 ATAF--PTLESF-ASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFV 124 (438)
T ss_dssp CEEE--SSHHHH-HHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEE
T ss_pred ceee--CCHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEe
Confidence 1222 344454 333579999999999999999999999993 46666
No 100
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=98.52 E-value=1.1e-07 Score=82.12 Aligned_cols=95 Identities=19% Similarity=0.224 Sum_probs=66.4
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccCh---hhhhhheeecccCCcccccceeeeCCceEEECCEEE
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITT---DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 76 (265)
|++|||+|+|+ |++|+.+++.+.++|+++|++++++..+. .... .+. | + ....+
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~----------~~~--------g--~--~~~~v 60 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAG----------ELA--------G--A--GKTGV 60 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTT----------CSS--------S--S--SCCSC
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHH----------HHc--------C--C--CcCCc
Confidence 34689999999 99999999999999999999999864321 1100 000 0 0 00012
Q ss_pred EEEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.++ .|++++ + .++|+|+++|.+..+.+.+..++++|+. +|+
T Consensus 61 ~~~--~dl~~~-l--~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVi 101 (273)
T 1dih_A 61 TVQ--SSLDAV-K--DDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVI 101 (273)
T ss_dssp CEE--SCSTTT-T--TSCSEEEECSCHHHHHHHHHHHHHTTCE-EEE
T ss_pred eec--CCHHHH-h--cCCCEEEEcCChHHHHHHHHHHHhCCCC-EEE
Confidence 232 455554 2 4799999999988899999999999973 555
No 101
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.46 E-value=2.9e-07 Score=82.86 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=63.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCC-CeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p-~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
++||||+|+| .|+..++++.+.| ++||++|+++..+ .+.++. .-| ++.+
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~------------------~~g---------v~~~- 57 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAH------------------AFG---------IPLY- 57 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHH------------------HTT---------CCEE-
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHH------------------HhC---------CCEE-
Confidence 6899999999 5999999998886 5999999998533 222220 111 2334
Q ss_pred cCCCCCCCcccccccEEEEecCCccc----HHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~----~~~~~~~~~~G~~~vvi 123 (265)
.|.+++. .++|+|+.|+|+..+ .+.+.+++++|+ +|++
T Consensus 58 -~~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~ 99 (372)
T 4gmf_A 58 -TSPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQ 99 (372)
T ss_dssp -SSGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEE
T ss_pred -CCHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEE
Confidence 4666662 579999999999887 788999999995 6666
No 102
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=98.43 E-value=1.9e-07 Score=82.63 Aligned_cols=97 Identities=20% Similarity=0.302 Sum_probs=62.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--------CCeEEEEEeccccCh-hh--hhhheeecccCCcccccceeeeCCceEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPFITT-DY--MTYMFKYDSVHGQWKHHELKVKDDKTLLF 71 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~--------p~~el~~v~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 71 (265)
|+||||+|+|.+|+.+++.|.++ +++++++|+++.... +. ....+ .. .+ ..+
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~--~~---~~-------~~~----- 64 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEAL--RM---KR-------ETG----- 64 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHH--HH---HH-------HHS-----
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHH--hh---hc-------cCc-----
Confidence 59999999999999999999988 899999999874221 10 00000 00 00 000
Q ss_pred CCEEEEEEecCCCCCCCcccccccEEEEecCCccc----HHhHHHHHhCCCCeEEE
Q 024565 72 GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVII 123 (265)
Q Consensus 72 ~g~~~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~----~~~~~~~~~~G~~~vvi 123 (265)
.++...|++++ .+..++|+|++|||+..+ .+++..++++|+ +|++
T Consensus 65 -----~~~~~~d~~~l-l~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGk-hVv~ 113 (327)
T 3do5_A 65 -----MLRDDAKAIEV-VRSADYDVLIEASVTRVDGGEGVNYIREALKRGK-HVVT 113 (327)
T ss_dssp -----SCSBCCCHHHH-HHHSCCSEEEECCCCC----CHHHHHHHHHTTTC-EEEE
T ss_pred -----cccCCCCHHHH-hcCCCCCEEEECCCCcccchhHHHHHHHHHHCCC-eEEe
Confidence 01000133333 233578999999998876 788999999996 4555
No 103
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.39 E-value=4.3e-07 Score=79.98 Aligned_cols=89 Identities=19% Similarity=0.264 Sum_probs=62.5
Q ss_pred ccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+||||+|+|.+|+. +++.|.++|+++++ |+++..+. +.++. .+ | + . ..+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~~~~~~~~~a~---------~~---------g--~-----~-~~~- 53 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTRNPKVLGTLAT---------RY---------R--V-----S-ATC- 53 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECSCHHHHHHHHH---------HT---------T--C-----C-CCC-
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHH---------Hc---------C--C-----C-ccc-
Confidence 589999999999984 99999988999999 99875321 11110 00 1 0 0 001
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+..+. + ..++|+|+.|+|+..+.+.+..++++|+ ++++
T Consensus 54 -~~~~~~-l-~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~ 92 (323)
T 1xea_A 54 -TDYRDV-L-QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFV 92 (323)
T ss_dssp -SSTTGG-G-GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEE
T ss_pred -cCHHHH-h-hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEE
Confidence 122222 2 3579999999999999999999999995 4555
No 104
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=98.37 E-value=1.9e-07 Score=84.16 Aligned_cols=93 Identities=12% Similarity=0.150 Sum_probs=64.6
Q ss_pred CCccEEEEEc-cChhHHH-HH----HHHHcCCCeEEE---------EEeccccC-hhhhhhheeecccCCcccccceeee
Q 024565 1 MGKVKIGING-FGRIGRL-VA----RVILQRDDVELV---------AVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVK 64 (265)
Q Consensus 1 m~~i~vgI~G-~G~~G~~-l~----~~L~~~p~~el~---------~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (265)
|+++||||+| +|.+|.. ++ +.+.+.++++++ +|+++..+ .+.++. .
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~------------------~ 65 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAK------------------R 65 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHH------------------H
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHH------------------H
Confidence 4578999999 6999998 88 888888766654 68887432 122110 0
Q ss_pred CCceEEECCEEEEEEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 65 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 65 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
-| + ..++ .|++++ .++.++|+|+.|||+..+.+.+..++++|+ +|++
T Consensus 66 ~~--~------~~~~--~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~Gk-~V~~ 112 (383)
T 3oqb_A 66 FN--I------ARWT--TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAGK-HVYC 112 (383)
T ss_dssp TT--C------CCEE--SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTTC-EEEE
T ss_pred hC--C------Cccc--CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCCC-eEEE
Confidence 01 0 0122 345554 334679999999999999999999999995 5666
No 105
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.34 E-value=5.3e-07 Score=75.92 Aligned_cols=79 Identities=28% Similarity=0.435 Sum_probs=59.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecCC
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 83 (265)
|||||+|+|.||+.+++.|. .+++++++++++..... + .+ .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~~~~--------------------------------~---~~--~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRGEHE--------------------------------K---MV--RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCCCT--------------------------------T---EE--SS
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCcchh--------------------------------h---hc--CC
Confidence 48999999999999999998 57899999988642110 0 11 23
Q ss_pred CCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
++++ .. .++|+||+|+|...+.+.+..++++|+ ++++
T Consensus 43 ~~~l-~~-~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~ 79 (236)
T 2dc1_A 43 IDEF-LQ-REMDVAVEAASQQAVKDYAEKILKAGI-DLIV 79 (236)
T ss_dssp HHHH-TT-SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEE
T ss_pred HHHH-hc-CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEE
Confidence 3333 11 468999999999999999999999996 4444
No 106
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=98.34 E-value=1.8e-06 Score=73.26 Aligned_cols=73 Identities=19% Similarity=0.279 Sum_probs=58.3
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
|||+|+|+ |.||+.+++.+.++|+++++++.++..+..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~----------------------------------------- 39 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS----------------------------------------- 39 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH-----------------------------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH-----------------------------------------
Confidence 58999998 999999999999999999999987631111
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
++ . ..++|+|+|+|++....+.++.+++.|+. +|+
T Consensus 40 ---~~-~-~~~~DvvIDfT~p~a~~~~~~~a~~~g~~-~Vi 74 (245)
T 1p9l_A 40 ---LL-T-DGNTEVVIDFTHPDVVMGNLEFLIDNGIH-AVV 74 (245)
T ss_dssp ---HH-H-HTTCCEEEECSCTTTHHHHHHHHHHTTCE-EEE
T ss_pred ---HH-h-ccCCcEEEEccChHHHHHHHHHHHHcCCC-EEE
Confidence 00 0 12579999999999999999999999974 444
No 107
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.30 E-value=6.6e-07 Score=78.85 Aligned_cols=89 Identities=17% Similarity=0.178 Sum_probs=62.1
Q ss_pred cEEEEEccChhHHHH-HHHHHcCCCeEEEEEeccccCh-hhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 4 VKIGINGFGRIGRLV-ARVILQRDDVELVAVNDPFITT-DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 4 i~vgI~G~G~~G~~l-~~~L~~~p~~el~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
+||||+|+|.+|+.+ ++.|.+ +++++++|+++..+. +.++ ..+ | . ...+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~------~~~------------g--~------~~~~-- 51 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYA------TEN------------G--I------GKSV-- 51 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHH------HHT------------T--C------SCCB--
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHH------HHc------------C--C------Cccc--
Confidence 589999999999998 888888 889999999975321 1111 000 1 0 0011
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.+++ ....++|+|+.|||+..+.+.+..++++|+ ++++
T Consensus 52 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~ 91 (332)
T 2glx_A 52 TSVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAGK-HVLC 91 (332)
T ss_dssp SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEE
T ss_pred CCHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCC-eEEE
Confidence 233333 222469999999999999999999999995 5656
No 108
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=98.21 E-value=1.9e-06 Score=71.49 Aligned_cols=90 Identities=17% Similarity=0.091 Sum_probs=63.1
Q ss_pred ccEEEEEccChhHHHHHHHH-HcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L-~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
.+||+|+|+|.+|+.+++.+ .+. +++++++.|.. .... + -.+.| +++...
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~d--p~k~---------------g---------~~i~g--v~V~~~ 130 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVD--PEKV---------------G---------RPVRG--GVIEHV 130 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESC--TTTT---------------T---------CEETT--EEEEEG
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCC--HHHH---------------h---------hhhcC--CeeecH
Confidence 47999999999999999963 334 89999999863 2111 0 01122 233322
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.+++ .+. ++|.|+.|+|+..+.+.+..+.++|++.++.
T Consensus 131 ~dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Iln 170 (211)
T 2dt5_A 131 DLLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILN 170 (211)
T ss_dssp GGHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HhHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEE
Confidence 344444 234 7999999999999989999999999875554
No 109
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=98.16 E-value=9.7e-07 Score=79.04 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=32.0
Q ss_pred CccEEEEEccChhHHHHHHHHHcCC---CeEEEEEecc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRD---DVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p---~~el~~v~~~ 36 (265)
+++||||+|+|.+|+.+++.|.+++ ++++++|++.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4689999999999999999999886 6999999985
No 110
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.08 E-value=5.4e-06 Score=61.13 Aligned_cols=98 Identities=14% Similarity=0.208 Sum_probs=59.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
++||.|+|+|.+|+.+++.|.+++..+++.+. +. ......+. ..+ + ........
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~-r~--~~~~~~~~----------------~~~--~-----~~~~~d~~ 58 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVAD-HD--LAALAVLN----------------RMG--V-----ATKQVDAK 58 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEE-SC--HHHHHHHH----------------TTT--C-----EEEECCTT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEe-CC--HHHHHHHH----------------hCC--C-----cEEEecCC
Confidence 57999999999999999999988657765544 42 21111100 000 0 00010001
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCC
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~ 126 (265)
+++++.-...++|+||.|+|...+......+.+.|++.++++.+
T Consensus 59 ~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (118)
T 3ic5_A 59 DEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTED 102 (118)
T ss_dssp CHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCSC
T ss_pred CHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEecCc
Confidence 11111000147899999999988888899999999865555543
No 111
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=98.04 E-value=6.7e-06 Score=68.36 Aligned_cols=91 Identities=11% Similarity=0.146 Sum_probs=57.9
Q ss_pred ccEEEEEccChhHHHHHHH-HHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARV-ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~-L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
.+||+|+|+|.+|+.+++. ...+++++++++.|.. ..... -.++| +++...
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~d--p~k~g------------------------~~i~g--v~V~~~ 136 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDIN--ESKIG------------------------TEVGG--VPVYNL 136 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESC--TTTTT------------------------CEETT--EEEEEG
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCC--HHHHH------------------------hHhcC--Ceeech
Confidence 4789999999999999994 4456679999999873 21110 01122 233322
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEc
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis 124 (265)
.+.+++ .+ .. |+|+.|+|+..+.+.+..+.++|++.++.-
T Consensus 137 ~dl~el-i~-~~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf 176 (215)
T 2vt3_A 137 DDLEQH-VK-DE-SVAILTVPAVAAQSITDRLVALGIKGILNF 176 (215)
T ss_dssp GGHHHH-CS-SC-CEEEECSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhHHHH-HH-hC-CEEEEecCchhHHHHHHHHHHcCCCEEEEc
Confidence 344433 11 23 999999999999999999999998755543
No 112
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.00 E-value=1.1e-05 Score=68.42 Aligned_cols=80 Identities=23% Similarity=0.296 Sum_probs=59.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
-|||+|+|+|.||+.+++. + ++|++++.+ . ... . + | +... .
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-~-k~g------------------e--------l---g--v~a~--~ 52 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-R-ISK------------------D--------I---P--GVVR--L 52 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S-CCSEEEEEC-S-SCC------------------C--------C---S--SSEE--C
T ss_pred cceEEEECcCHHHHHHHhc---C-CcEEEEEEe-c-ccc------------------c--------c---C--ceee--C
Confidence 4799999999999999998 5 899999987 2 111 0 1 1 1122 4
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEc
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis 124 (265)
|.+++. .++|+|++|.+.....++.+++|++|+..++.|
T Consensus 53 d~d~ll---a~pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 53 DEFQVP---SDVSTVVECASPEAVKEYSLQILKNPVNYIIIS 91 (253)
T ss_dssp SSCCCC---TTCCEEEECSCHHHHHHHHHHHTTSSSEEEECC
T ss_pred CHHHHh---hCCCEEEECCCHHHHHHHHHHHHHCCCCEEEcC
Confidence 677773 379999999999988888999999998533334
No 113
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.90 E-value=2.8e-05 Score=67.47 Aligned_cols=87 Identities=23% Similarity=0.216 Sum_probs=63.1
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
.+||+|+|+ |.+|+.+++.+.++ ++++++..++...... ..| ++++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~~g~~---------------------~~G---------~~vy-- 53 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT---------------------HLG---------LPVF-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCE---------------------ETT---------EEEE--
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCcccce---------------------eCC---------eecc--
Confidence 589999999 99999999999887 4887777666311110 011 3444
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.++++ ...++|+|+.|+|+..+.+.+..++++|++.+|+
T Consensus 54 ~sl~el~-~~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 54 NTVREAV-AATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp SSHHHHH-HHHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 3444441 1126999999999999999999999999986554
No 114
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.84 E-value=1.2e-05 Score=66.48 Aligned_cols=96 Identities=16% Similarity=0.259 Sum_probs=64.0
Q ss_pred ccEEEEEccChhHHHHHHHHH-cCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~-~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
+.||+|+|+|.+|+.+++.+. ++.+++++++.|..... .. |.- . ++| ++++..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~-ki----------G~~------~-------i~G--vpV~~~ 137 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSND-LV----------GKT------T-------EDG--IPVYGI 137 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTST-TT----------TCB------C-------TTC--CBEEEG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchh-cc----------Cce------e-------ECC--eEEeCH
Confidence 579999999999999998753 34679999999863220 11 000 0 011 233322
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcC
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~ 125 (265)
.+.+++ .+..++|.++.|+|.....+.+..+.++|++.++--+
T Consensus 138 ~dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFa 180 (212)
T 3keo_A 138 STINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFS 180 (212)
T ss_dssp GGHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECS
T ss_pred HHHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcC
Confidence 333332 1235799999999999888899999999998666433
No 115
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.81 E-value=2.8e-05 Score=70.63 Aligned_cols=145 Identities=13% Similarity=0.137 Sum_probs=84.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe-EEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~-el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|+||+|+|+|.+|+.+++.|.+++++ ..+.++++..+ .+.++..+ +.. .+ ..+....
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l------~~~--------~~-------~~~~~~~ 59 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSI------KAK--------GY-------GEIDITT 59 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHH------HHT--------TC-------CCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHh------hhh--------cC-------CceEEEE
Confidence 37999999999999999999999876 45566665322 22222100 000 00 0001111
Q ss_pred cCCC---CCCC--cccccccEEEEecCCcccHHhHHHHHhCCCCeEEEcCCC-CCCceEEeeec---ccccc-CCCCeEE
Q 024565 81 VRNP---EEIP--WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAPMFVVGVN---EHEYK-PELNIVS 150 (265)
Q Consensus 81 ~~~~---~~~~--~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis~~~-~~~~~~v~~vn---~~~~~-~~~~~Va 150 (265)
.|. +++. .+..++|+||.|+|...+...++.++++|+..++++... ++...+.|... .+..+ ....++.
T Consensus 60 -~D~~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~ 138 (405)
T 4ina_A 60 -VDADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALL 138 (405)
T ss_dssp -CCTTCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEE
T ss_pred -ecCCCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEE
Confidence 121 1110 111138999999999888888999999998533343331 11111122210 11111 1456899
Q ss_pred cCCCchhhhHhHHHHHHHh
Q 024565 151 NASCTTNCLAPLAKVIHDK 169 (265)
Q Consensus 151 ~p~C~~ta~~~~L~pL~~~ 169 (265)
++||.+....+...++.++
T Consensus 139 g~G~~PG~~~l~a~~~~~~ 157 (405)
T 4ina_A 139 GSGFDPGVTNVFCAYAQKH 157 (405)
T ss_dssp CCBTTTBHHHHHHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHHh
Confidence 9999999988888888876
No 116
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=97.64 E-value=7e-05 Score=67.35 Aligned_cols=113 Identities=16% Similarity=0.179 Sum_probs=61.4
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCC-eEEEEEeccccChhhhhhheeecccCCcccccceeeeCC---ceEE--EC
Q 024565 1 MG-KVKIGINGF-GRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDD---KTLL--FG 72 (265)
Q Consensus 1 m~-~i~vgI~G~-G~~G~~l~~~L~~~p~-~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~--~~ 72 (265)
|+ |+||+|+|+ |.+|+.+++.+.++|+ ++++++.... +.+.+....+ ...+.+ +...+. ..+. +.
T Consensus 1 m~~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~-ni~~l~~~~~--~f~~~~----v~v~d~~~~~~l~~~l~ 73 (388)
T 1r0k_A 1 MSQPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAK--RTNAKR----AVIADPSLYNDLKEALA 73 (388)
T ss_dssp -CCCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHH--HTTCSE----EEESCGGGHHHHHHHTT
T ss_pred CCCceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC-CHHHHHHHHH--HcCCcE----EEEcChHHHHHHHHHhc
Confidence 54 489999999 9999999999999997 9999994322 2322111110 000000 000000 0000 00
Q ss_pred CEEEEEE-ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 73 EKPVTVF-GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 73 g~~~~~~-~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+....++ ..++..++ .... +|+|++|++.....+...+++++|+ ++++
T Consensus 74 ~~~~~v~~g~~~~~el-~~~~-iDvVV~ai~G~aGl~ptlaAi~aGK-~Vvl 122 (388)
T 1r0k_A 74 GSSVEAAAGADALVEA-AMMG-ADWTMAAIIGCAGLKATLAAIRKGK-TVAL 122 (388)
T ss_dssp TCSSEEEESHHHHHHH-HTSC-CSEEEECCCSGGGHHHHHHHHHTTS-EEEE
T ss_pred cCCcEEEeCccHHHHH-HcCC-CCEEEEeCCCHHHHHHHHHHHHCCC-EEEE
Confidence 0001121 11111122 1124 8999999977778888889999995 5555
No 117
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.64 E-value=0.00022 Score=54.85 Aligned_cols=83 Identities=22% Similarity=0.348 Sum_probs=59.4
Q ss_pred CccEEEEEcc----ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEE
Q 024565 2 GKVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (265)
Q Consensus 2 ~~i~vgI~G~----G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 77 (265)
+..+|+|+|+ |.+|..+++.|.+.. +++..++ +. .+. + .| .+
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vn-p~--~~~--------------------------i--~G--~~ 58 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVN-PN--YDE--------------------------I--EG--LK 58 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEEC-TT--CSE--------------------------E--TT--EE
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeC-CC--CCe--------------------------E--CC--ee
Confidence 3579999999 999999999998874 6744433 32 110 0 12 23
Q ss_pred EEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
++ .++++++ ..+|+|+.|+|.....+.++.+.++|++.+++
T Consensus 59 ~~--~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~ 99 (138)
T 1y81_A 59 CY--RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWF 99 (138)
T ss_dssp CB--SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ec--CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 33 3556663 56999999999988888888899999987766
No 118
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.58 E-value=2.5e-05 Score=64.89 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=30.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|+|+||+|+|+|.+|..+++.|.+.. .++..+.++.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g-~~V~~v~~r~ 56 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQ-IPAIIANSRG 56 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTT-CCEEEECTTC
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCC
Confidence 55789999999999999999999874 6777767764
No 119
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.56 E-value=3.8e-05 Score=68.69 Aligned_cols=87 Identities=23% Similarity=0.267 Sum_probs=54.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
+|||.|+|+|++|+.+++.|.++.++.++.+... ..+... . + . ..+.+ ...
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~--~~~~~~------~----~---------~-------~~~~~-d~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNE--NLEKVK------E----F---------A-------TPLKV-DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHH--HHHHHT------T----T---------S-------EEEEC-CTT
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHH--HHHHHh------c----c---------C-------CcEEE-ecC
Confidence 5899999999999999999988765543322211 111110 0 0 0 01111 112
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCC
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~ 118 (265)
|.+++.=...++|+|+.|+|...+...++.++++|+
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~ 102 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV 102 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc
Confidence 222211001578999999999999999999999998
No 120
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.52 E-value=0.00016 Score=62.58 Aligned_cols=87 Identities=17% Similarity=0.203 Sum_probs=62.3
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
.+||+|+|+ |.+|+.+++.+.++ ++++++...+..... . +.| ++++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~g~---------------------~-------i~G--~~vy-- 53 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKGGM---------------------E-------VLG--VPVY-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC---------------------E-------ETT--EEEE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCCCc---------------------e-------ECC--EEee--
Confidence 579999999 99999999999887 588776555532110 0 112 3454
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.++++ ...++|++++++|.....+.++.+.++|++.+|+
T Consensus 54 ~sl~el~-~~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 54 DTVKEAV-AHHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp SSHHHHH-HHSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2344441 0116899999999999999999999999986665
No 121
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.46 E-value=0.00026 Score=60.87 Aligned_cols=84 Identities=14% Similarity=0.066 Sum_probs=51.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC-CeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p-~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|+++||+|+|+|.+|..+++.|.++. +.++. +.++..+ ....+. ..| + .....
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~-~~d~~~~--~~~~~~----------------~~g--~-----~~~~~ 57 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIV-GYNRSDR--SRDIAL----------------ERG--I-----VDEAT 57 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEE-EECSSHH--HHHHHH----------------HTT--S-----CSEEE
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEE-EEcCCHH--HHHHHH----------------HcC--C-----ccccc
Confidence 66789999999999999999998763 46654 4454311 111000 011 0 00111
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHh
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK 115 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~ 115 (265)
.++++. ..++|+||.|+|.....+.+..+..
T Consensus 58 --~~~~~~---~~~aDvVilavp~~~~~~v~~~l~~ 88 (290)
T 3b1f_A 58 --ADFKVF---AALADVIILAVPIKKTIDFIKILAD 88 (290)
T ss_dssp --SCTTTT---GGGCSEEEECSCHHHHHHHHHHHHT
T ss_pred --CCHHHh---hcCCCEEEEcCCHHHHHHHHHHHHh
Confidence 344443 2579999999999887777766544
No 122
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=97.44 E-value=0.0002 Score=63.61 Aligned_cols=112 Identities=15% Similarity=0.168 Sum_probs=63.0
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEEC-CEEEEE
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG-EKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ 78 (265)
|.+.||+|+|+ |.||...++.+.+|+.+++++++..+ +.+.+....+ ...+++- ...+.... . .-.-..
T Consensus 1 M~~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~-n~~~l~~q~~--~f~p~~v----~v~~~~~~--~~~l~~~~ 71 (376)
T 3a06_A 1 MEERTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHS-NLELAFKIVK--EFNVKNV----AITGDVEF--EDSSINVW 71 (376)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESS-CHHHHHHHHH--HHTCCEE----EECSSCCC--CCSSSEEE
T ss_pred CCcceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccC-CHHHHHHHHH--HcCCCEE----EEccHHHH--HHHHHHHc
Confidence 65689999998 99999999999999789999996532 3433322110 0001110 00000000 0 000000
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.......++ ....++|+|+.|++.....+-.-.++++|+ ++.+
T Consensus 72 ~G~~~l~el-~~~~~~D~Vv~AivG~aGL~ptlaAi~aGK-~vaL 114 (376)
T 3a06_A 72 KGSHSIEEM-LEALKPDITMVAVSGFSGLRAVLASLEHSK-RVCL 114 (376)
T ss_dssp ESTTHHHHH-HHHHCCSEEEECCCSTTHHHHHHHHHHHCS-EEEE
T ss_pred cCHHHHHHH-hcCCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEE
Confidence 000000111 011468999999999999999999999995 4545
No 123
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=97.43 E-value=0.00038 Score=53.13 Aligned_cols=92 Identities=16% Similarity=0.126 Sum_probs=59.9
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
++.|+.|+|+|..|+.+++.+.++++++++++.+...... +. .+.| ++++..
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~-----------------g~---------~i~g--~pV~g~ 54 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKH-----------------KT---------TMQG--ITIYRP 54 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGT-----------------TC---------EETT--EEEECG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccC-----------------CC---------EecC--eEEECH
Confidence 4578999999999999999999888999999998631110 00 0122 334321
Q ss_pred CCCCCCCcccccccEEEEecCCccc---HHhHHHHHhCCCCeEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTD---KDKAAAHLKGGAKKVI 122 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~---~~~~~~~~~~G~~~vv 122 (265)
.+..++ ....++|.|+.|.|.... .+.+..+.+.|++..+
T Consensus 55 ~~l~~~-~~~~~id~viia~~~~~~~~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 55 KYLERL-IKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp GGHHHH-HHHHTCCEEEECCTTSCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHH-HHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 122111 112468999999986544 4566778889985333
No 124
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.42 E-value=0.00037 Score=54.02 Aligned_cols=84 Identities=18% Similarity=0.201 Sum_probs=59.4
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~i~vgI~G~----G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
+.+|+|+|+ |.+|..+++.|.+.. +++..+ ++...+. .+ .| .++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~v-np~~~g~--------------------------~i--~G--~~~ 60 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPV-SPKVAGK--------------------------TL--LG--QQG 60 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEE-CSSSTTS--------------------------EE--TT--EEC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEe-CCccccc--------------------------cc--CC--eec
Confidence 468999999 789999999998775 664333 3321111 00 12 233
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .++++++ ..+|+|+.|+|.....+.+..+.++|++.+++
T Consensus 61 ~--~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i 100 (145)
T 2duw_A 61 Y--ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWL 100 (145)
T ss_dssp C--SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEEC
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 3 3566773 57999999999988888888888999887776
No 125
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=97.39 E-value=0.00021 Score=60.62 Aligned_cols=86 Identities=13% Similarity=0.140 Sum_probs=55.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
++||+|+|+|.+|..+++.|.+.. ++++.+.++..+ .+.+. . .-| +...
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g-~~~v~~~~~~~~~~~~~~------~------------~~g---------~~~~-- 59 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKG-FRIVQVYSRTEESARELA------Q------------KVE---------AEYT-- 59 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHT-CCEEEEECSSHHHHHHHH------H------------HTT---------CEEE--
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCC-CeEEEEEeCCHHHHHHHH------H------------HcC---------Ccee--
Confidence 479999999999999999998764 676777776422 11111 0 001 1122
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHh---CCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK---GGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~---~G~~~vvi 123 (265)
.++++. ..++|+||.|+|.....+..+.+.+ .|. +++
T Consensus 60 ~~~~~~---~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~--ivv 99 (266)
T 3d1l_A 60 TDLAEV---NPYAKLYIVSLKDSAFAELLQGIVEGKREEA--LMV 99 (266)
T ss_dssp SCGGGS---CSCCSEEEECCCHHHHHHHHHHHHTTCCTTC--EEE
T ss_pred CCHHHH---hcCCCEEEEecCHHHHHHHHHHHHhhcCCCc--EEE
Confidence 234333 1579999999999877666666554 454 555
No 126
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.35 E-value=0.00058 Score=52.85 Aligned_cols=82 Identities=22% Similarity=0.218 Sum_probs=59.5
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~i~vgI~G~----G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
+.+|+|+|+ |.+|..+++.|.++. +++..|+ +. .. + +.| +++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vn-p~--~~---------~-------------------i~G--~~~ 67 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHG-YDVYPVN-PK--YE---------E-------------------VLG--RKC 67 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEEC-TT--CS---------E-------------------ETT--EEC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEEC-CC--CC---------e-------------------ECC--eec
Confidence 478999999 699999999998875 6754443 21 11 0 012 233
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .++++++ ..+|+|+.|+|.....+.++.+.++|++.+++
T Consensus 68 y--~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~ 107 (144)
T 2d59_A 68 Y--PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWF 107 (144)
T ss_dssp B--SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 3 3456663 46999999999999999999999999987766
No 127
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.30 E-value=0.00045 Score=59.98 Aligned_cols=87 Identities=22% Similarity=0.256 Sum_probs=61.3
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
+.+++|+|+ |.+|+.+++.+.++ ++++++-.++....+ . +.| ++++
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~VnP~~~g~--------------------------~--i~G--~~vy-- 59 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVTPGKGGQ--------------------------N--VHG--VPVF-- 59 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHT-TCCEEEEECTTCTTC--------------------------E--ETT--EEEE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeCCCCCCc--------------------------e--ECC--Eeee--
Confidence 468999999 99999999999987 577665554431111 0 012 3454
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.++++ ...++|++++|+|+..+.+.++.+.++|++.+|+
T Consensus 60 ~sl~el~-~~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 60 DTVKEAV-KETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp SSHHHHH-HHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHh-hcCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 3444442 0016899999999999999999999999985555
No 128
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.21 E-value=5.5e-05 Score=64.94 Aligned_cols=84 Identities=15% Similarity=0.050 Sum_probs=45.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||||+|+|.+|..+++.|.++ ++++.+.+++.+ .+.+. . .-+ . ..
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~~~~~~~~~~------~------------~~g---------~-~~-- 49 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR--YEIGYILSRSIDRARNLA------E------------VYG---------G-KA-- 49 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC------CCCEECSSHHHHHHHH------H------------HTC---------C-CC--
T ss_pred CceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeCCHHHHHHHH------H------------HcC---------C-cc--
Confidence 57999999999999999998876 676567766422 11111 0 001 0 11
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+++++ ..++|+||.|+|.....+.+..+...|. +|+
T Consensus 50 ~~~~~~---~~~~DvVilav~~~~~~~v~~~l~~~~~--ivi 86 (276)
T 2i76_A 50 ATLEKH---PELNGVVFVIVPDRYIKTVANHLNLGDA--VLV 86 (276)
T ss_dssp CSSCCC---CC---CEEECSCTTTHHHHHTTTCCSSC--CEE
T ss_pred CCHHHH---HhcCCEEEEeCChHHHHHHHHHhccCCC--EEE
Confidence 244443 1468999999999887666654433343 444
No 129
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.20 E-value=0.00091 Score=58.13 Aligned_cols=87 Identities=20% Similarity=0.248 Sum_probs=61.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
+.|+.|+|+ |.+|+.+++.+.++ ++++++..++....+ . +.| ++++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~VnP~~~g~--------------------------~--i~G--~~vy-- 59 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKGGS--------------------------E--VHG--VPVY-- 59 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC--------------------------E--ETT--EEEE--
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeCCCCCCc--------------------------e--ECC--Eeee--
Confidence 578999999 99999999999887 577665554431111 0 012 3454
Q ss_pred CCCCCCCccccc-ccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~-~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.++++ .... +|++++++|...+.+.++.+.++|++.+|+
T Consensus 60 ~sl~el~-~~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 60 DSVKEAL-AEHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp SSHHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHh-hcCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 3444442 0013 899999999999999999999999985655
No 130
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.14 E-value=0.00055 Score=58.87 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=27.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCC-eEEEEEeccc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDD-VELVAVNDPF 37 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~-~el~~v~~~~ 37 (265)
|+++||+|+|+|.+|..+++.|.++.. .+-+.+++++
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCC
Confidence 778999999999999999999987741 2224456654
No 131
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.10 E-value=0.0042 Score=52.66 Aligned_cols=34 Identities=12% Similarity=0.190 Sum_probs=28.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
||+||.|.|+|++|+.+++.|.++. .++.++...
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r~ 37 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQG-WRIIGTSRN 37 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGT-CEEEEEESC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 3589999999999999999999884 788877654
No 132
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.02 E-value=0.0015 Score=57.12 Aligned_cols=89 Identities=13% Similarity=0.041 Sum_probs=53.4
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCe-EEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~-el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
+++||+|+|+|.||..+++.|.+.... +|. ++++..+ ...... +.| + .....
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~-~~dr~~~--~~~~a~----------------~~G--~-----~~~~~- 84 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIY-GYDINPE--SISKAV----------------DLG--I-----IDEGT- 84 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEE-EECSCHH--HHHHHH----------------HTT--S-----CSEEE-
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEE-EEECCHH--HHHHHH----------------HCC--C-----cchhc-
Confidence 347999999999999999999887522 544 4555322 111110 111 0 00111
Q ss_pred cCCCCC-CCcccccccEEEEecCCcccHHhHHHHH---hCCCCeEEE
Q 024565 81 VRNPEE-IPWAETGAEYVVESTGVFTDKDKAAAHL---KGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~-~~~~~~~~DvV~~at~~~~~~~~~~~~~---~~G~~~vvi 123 (265)
.++++ . ..++|+||.|+|.....+..+.+. +.|+ +|+
T Consensus 85 -~~~~~~~---~~~aDvVilavp~~~~~~vl~~l~~~l~~~~--iv~ 125 (314)
T 3ggo_A 85 -TSIAKVE---DFSPDFVMLSSPVRTFREIAKKLSYILSEDA--TVT 125 (314)
T ss_dssp -SCTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHHSCTTC--EEE
T ss_pred -CCHHHHh---hccCCEEEEeCCHHHHHHHHHHHhhccCCCc--EEE
Confidence 34554 2 267999999999987766655443 4555 555
No 133
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.99 E-value=0.0016 Score=50.13 Aligned_cols=84 Identities=13% Similarity=0.077 Sum_probs=59.5
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~i~vgI~G~----G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
+.+|+|+|+ |.+|..+++.|.++. +++..|+ +....+ . +.| +++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vn-p~~~~~--------------------------~--i~G--~~~ 60 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVN-PRFQGE--------------------------E--LFG--EEA 60 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEEC-GGGTTS--------------------------E--ETT--EEC
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeC-CCcccC--------------------------c--CCC--EEe
Confidence 468999999 799999999998875 6644333 210010 0 112 234
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+ .+.++++ ..+|+++.|+|.....+.++++.+.|++.+++
T Consensus 61 ~--~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~ 100 (140)
T 1iuk_A 61 V--ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWL 100 (140)
T ss_dssp B--SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEE
T ss_pred c--CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 3 3456663 56999999999988888999999999987776
No 134
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.98 E-value=0.0021 Score=48.31 Aligned_cols=82 Identities=18% Similarity=0.080 Sum_probs=60.9
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~i~vgI~G~----G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
+.+|+|+|+ +..|..+++.|.++. +++..|+-.. + + +.| .+.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~~-~-----------~-------------------i~G--~~~ 49 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRKK-G-----------E-------------------VLG--KTI 49 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSSC-S-----------E-------------------ETT--EEC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCCC-C-----------c-------------------CCC--eec
Confidence 468999999 568999999999875 5776665321 0 0 112 233
Q ss_pred EecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEEc
Q 024565 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvis 124 (265)
+ .+.++++ . +|+|+.++|.....+.++++.+.|+|.++++
T Consensus 50 y--~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~ 89 (122)
T 3ff4_A 50 I--NERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFN 89 (122)
T ss_dssp B--CSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEEC
T ss_pred c--CChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEEC
Confidence 3 4567774 5 9999999999999999999999999976663
No 135
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.98 E-value=0.0015 Score=54.20 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=29.0
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|+|++|-|.|+ |.+|+.+++.|.+....+++.+..
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc
Confidence 55789999999 999999999999886577776654
No 136
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.92 E-value=0.0028 Score=58.63 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=28.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCe-EEEEEe
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~-el~~v~ 34 (265)
+++||+|+|+|++|..++..|++.|+. +|+.+.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D 50 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQ 50 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEE
Confidence 468999999999999999999988657 777654
No 137
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.91 E-value=0.00061 Score=60.10 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=26.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+++||+|+|+|.+|..++..|.+.. .++. +.++
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g-~~V~-~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKG-QSVL-AWDI 35 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCC-CEEE-EEeC
Confidence 44579999999999999999998764 6654 4444
No 138
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=96.87 E-value=0.0016 Score=54.11 Aligned_cols=69 Identities=25% Similarity=0.336 Sum_probs=53.3
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
+|-+|+|+ |+||+.+.++. +.++++|++..++. . .
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~~--~----------------------------------~------- 48 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDVN--G----------------------------------V------- 48 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEETT--E----------------------------------E-------
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcCC--C----------------------------------c-------
Confidence 78999999 99999998865 66789998876641 0 0
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+++ .++|+|+|-|-+....+.++.+++.|++ +|+
T Consensus 49 --~~l----~~~DVvIDFT~P~a~~~~~~~~~~~g~~-~Vi 82 (228)
T 1vm6_A 49 --EEL----DSPDVVIDFSSPEALPKTVDLCKKYRAG-LVL 82 (228)
T ss_dssp --EEC----SCCSEEEECSCGGGHHHHHHHHHHHTCE-EEE
T ss_pred --ccc----cCCCEEEECCCHHHHHHHHHHHHHcCCC-EEE
Confidence 011 2479999888888999999999999985 444
No 139
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.86 E-value=0.0016 Score=55.41 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=29.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+|+||-|.|+|++|+.+++.|.+.. .+|+++...
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQG-HEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTT-CCEEEEECT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 77889999999999999999999874 677777643
No 140
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.85 E-value=0.0039 Score=54.21 Aligned_cols=30 Identities=33% Similarity=0.422 Sum_probs=24.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
+|||+|+|+|.+|..+...|. . +.++..+.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~~ 31 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L-YHDVTVVT 31 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHh-c-CCceEEEE
Confidence 489999999999999999998 4 46666554
No 141
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.83 E-value=0.0023 Score=55.06 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=24.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
|+|+||+|+|+|.+|..++..|.+.. .++..+
T Consensus 1 ~~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~ 32 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGSRLGIMLHQGG-NDVTLI 32 (316)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCC-CcEEEE
Confidence 45689999999999999999998774 565544
No 142
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.77 E-value=0.002 Score=55.74 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||+|+|+|++|..+++.|.+.. .++. +.++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~-~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG-LSTW-GADL 38 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CeEE-EEEC
Confidence 579999999999999999999874 5654 4455
No 143
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.75 E-value=0.0026 Score=54.14 Aligned_cols=94 Identities=15% Similarity=0.130 Sum_probs=55.4
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
|||-|.|+ |.+|+.+++.|.+.++.++.++.........+ . ..+ + .+....-.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------~------~~~--v-----~~~~~D~~ 54 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------W------RGK--V-----SVRQLDYF 54 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------G------BTT--B-----EEEECCTT
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------h------hCC--C-----EEEEcCCC
Confidence 47999999 99999999999887667887776542111110 0 001 1 01010101
Q ss_pred CCCCCCcccccccEEEEecCCc--------ccHHhHHHHHhCCCCeEEE
Q 024565 83 NPEEIPWAETGAEYVVESTGVF--------TDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~--------~~~~~~~~~~~~G~~~vvi 123 (265)
|++.+.-...++|+||.|++.. .+...++.+.++|++++|.
T Consensus 55 d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~ 103 (289)
T 3e48_A 55 NQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIF 103 (289)
T ss_dssp CHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEE
Confidence 2222111125789999998753 2345567777889877664
No 144
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.72 E-value=0.0023 Score=52.35 Aligned_cols=35 Identities=31% Similarity=0.339 Sum_probs=27.9
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~-~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+ |+||.|.|+ |.+|+.+++.|.++. .++.++...
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~ 37 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRG-FEVTAVVRH 37 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSC
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcC
Confidence 54 579999999 999999999999885 677766543
No 145
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=96.72 E-value=0.00026 Score=59.86 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=27.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|+||+|+|+|.+|+.+++.|.+.. .+ +.++++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g-~~-v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTP-HE-LIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSS-CE-EEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCC-Ce-EEEECCC
Confidence 579999999999999999998775 34 4666663
No 146
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.70 E-value=0.00099 Score=59.44 Aligned_cols=34 Identities=32% Similarity=0.465 Sum_probs=27.0
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.++||||||+|.+|..+++.|.++. .+|. ++++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G-~~V~-v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGG-HECV-VYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEE-EECSC
T ss_pred cCCEEEEECchHHHHHHHHHHHhCC-CEEE-EEeCC
Confidence 3589999999999999999999885 5654 44553
No 147
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.68 E-value=0.0012 Score=57.84 Aligned_cols=36 Identities=14% Similarity=0.275 Sum_probs=26.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCC---eEEEEEeccc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDD---VELVAVNDPF 37 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~---~el~~v~~~~ 37 (265)
|++|||+|||+|.+|..+++.|.+... .++. +.++.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~-v~~r~ 58 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIM-ASSPD 58 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEE-EECSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEE-EECCC
Confidence 446799999999999999999987641 3443 44553
No 148
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.67 E-value=0.0013 Score=57.31 Aligned_cols=34 Identities=18% Similarity=0.399 Sum_probs=27.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.|+||||+|+|.+|..+++.|.+.. .++. +.++.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G-~~V~-~~dr~ 53 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNG-FKVT-VWNRT 53 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTT-CEEE-EECSS
T ss_pred cCCEEEEECccHHHHHHHHHHHHCC-CeEE-EEeCC
Confidence 4689999999999999999999875 5655 44553
No 149
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.64 E-value=0.001 Score=57.21 Aligned_cols=32 Identities=28% Similarity=0.598 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||+|+|+|.+|..+++.|.++. .++ .+.++
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g-~~V-~~~~~ 36 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAG-YSL-VVSDR 36 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTT-CEE-EEECS
T ss_pred cceEEEECchHHHHHHHHHHHhCC-CEE-EEEeC
Confidence 379999999999999999998874 665 45555
No 150
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.61 E-value=0.0015 Score=56.96 Aligned_cols=82 Identities=15% Similarity=0.113 Sum_probs=48.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
|+||||+|+|.+|..+++.|.+.. .+-+.+.++..+......+. ..| +... .
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~~~dr~~~~~~~~~~~----------------~~g---------~~~~--~ 75 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG-AIDMAAYDAASAESWRPRAE----------------ELG---------VSCK--A 75 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS-CCEEEEECSSCHHHHHHHHH----------------HTT---------CEEC--S
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CCeEEEEcCCCCHHHHHHHH----------------HCC---------CEEe--C
Confidence 579999999999999999999874 42344555531011111000 111 1111 2
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHh
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK 115 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~ 115 (265)
++++. ..++|+||.|+|.....+.+....+
T Consensus 76 ~~~e~---~~~aDvVi~~vp~~~~~~~~~~l~~ 105 (312)
T 3qsg_A 76 SVAEV---AGECDVIFSLVTAQAALEVAQQAGP 105 (312)
T ss_dssp CHHHH---HHHCSEEEECSCTTTHHHHHHHHGG
T ss_pred CHHHH---HhcCCEEEEecCchhHHHHHHhhHh
Confidence 33332 1568999999999887776655543
No 151
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.56 E-value=0.0033 Score=53.84 Aligned_cols=84 Identities=14% Similarity=0.115 Sum_probs=51.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||+|+|+ |.+|..+++.|.+.. .++. +.++..+ ....+. +.| + ..
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g-~~V~-~~~r~~~--~~~~~~----------------~~g--~-------~~--- 58 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSA-HHLA-AIEIAPE--GRDRLQ----------------GMG--I-------PL--- 58 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSS-SEEE-EECCSHH--HHHHHH----------------HTT--C-------CC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEE-EEECCHH--HHHHHH----------------hcC--C-------Cc---
Confidence 479999999 999999999998875 5765 5555322 111110 001 0 01
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHh---CCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK---GGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~---~G~~~vvi 123 (265)
.++.+. ..++|+||.|+|.....+..+.+.. .|. +++
T Consensus 59 ~~~~~~---~~~aDvVi~av~~~~~~~v~~~l~~~l~~~~--ivv 98 (286)
T 3c24_A 59 TDGDGW---IDEADVVVLALPDNIIEKVAEDIVPRVRPGT--IVL 98 (286)
T ss_dssp CCSSGG---GGTCSEEEECSCHHHHHHHHHHHGGGSCTTC--EEE
T ss_pred CCHHHH---hcCCCEEEEcCCchHHHHHHHHHHHhCCCCC--EEE
Confidence 122222 2579999999998877666665543 354 555
No 152
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.56 E-value=0.0014 Score=56.67 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=26.4
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+|+||+|+|+|++|..+++.|.+.. .++.. .++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G-~~V~~-~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAG-YLLNV-FDL 34 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCC-CeEEE-EcC
Confidence 3689999999999999999999875 56544 455
No 153
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.55 E-value=0.00076 Score=59.40 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=26.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|+++||+|+|+|.+|..++..|.+.. .++..+.
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~~ 33 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAG-EAINVLA 33 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC-CEEEEEE
Confidence 77789999999999999999998764 4554443
No 154
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.52 E-value=0.002 Score=56.34 Aligned_cols=32 Identities=28% Similarity=0.302 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||||+|+|++|..+++.|.+.. .++. +.++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~-~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG-YALQ-VWNR 62 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCEEEEECccHHHHHHHHHHHhCC-CeEE-EEcC
Confidence 479999999999999999999874 6654 4455
No 155
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=96.51 E-value=0.0013 Score=55.36 Aligned_cols=26 Identities=31% Similarity=0.639 Sum_probs=23.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p 26 (265)
|+++||+|+|+|.+|..+++.|.+..
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC
Confidence 67789999999999999999998654
No 156
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.51 E-value=0.0021 Score=57.39 Aligned_cols=87 Identities=21% Similarity=0.213 Sum_probs=54.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
..||+|+|+|.+|+.+++.|.++ .+ +.|++++.+ .+.++ . .+ ..+.+ ..
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~--~~-V~V~~R~~~~a~~la------~---~~-----------------~~~~~-d~ 65 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE--FD-VYIGDVNNENLEKVK------E---FA-----------------TPLKV-DA 65 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SE-EEEEESCHHHHHHHT------T---TS-----------------EEEEC-CT
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC--Ce-EEEEECCHHHHHHHH------h---hC-----------------CeEEE-ec
Confidence 47999999999999999999987 55 456666422 11111 0 00 00100 00
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCC
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~ 119 (265)
.+.+++.=...++|+|+.|+|...+.+.+..++++|+.
T Consensus 66 ~~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~~ 103 (365)
T 2z2v_A 66 SNFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVD 103 (365)
T ss_dssp TCHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCCe
Confidence 11111100014789999999988888888899999973
No 157
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.51 E-value=0.0024 Score=54.81 Aligned_cols=32 Identities=19% Similarity=0.398 Sum_probs=26.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
+||+|+|+|.+|..+++.|.++. .++. +.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~-~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVT-IWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEE-EEcCC
Confidence 68999999999999999999875 6665 45553
No 158
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=96.48 E-value=0.0071 Score=52.37 Aligned_cols=34 Identities=35% Similarity=0.447 Sum_probs=29.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|||+|+|+|.+|..++.+|..++.+.-+.+.|..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 6899999999999999999888777666777764
No 159
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.45 E-value=0.0038 Score=49.90 Aligned_cols=34 Identities=26% Similarity=0.281 Sum_probs=29.0
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|+.+||.|.|+ |.+|+.+++.|.++. .++..+..
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r 35 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVR 35 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Confidence 66689999999 999999999999875 67777654
No 160
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=96.40 E-value=0.0012 Score=55.53 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=26.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe--EEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDV--ELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~--el~~v~~~~ 37 (265)
++||+|+|+|.+|..+++.|.+...+ +-+.+++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 47999999999999999999877421 223455653
No 161
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.40 E-value=0.0047 Score=56.37 Aligned_cols=31 Identities=35% Similarity=0.454 Sum_probs=25.8
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
.++||+|+|+|++|..++..|.+ +.+|+++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~--G~~V~~~D 65 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ--NHEVVALD 65 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT--TSEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHc--CCeEEEEe
Confidence 36899999999999999998886 57776553
No 162
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.40 E-value=0.011 Score=47.97 Aligned_cols=32 Identities=28% Similarity=0.402 Sum_probs=27.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|||.|.|+ |.+|+.+++.|.++. .++.++...
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARK 33 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS-CEEEEEESS
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 38999999 999999999999874 787777643
No 163
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.37 E-value=0.0083 Score=52.37 Aligned_cols=83 Identities=16% Similarity=0.029 Sum_probs=49.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
++||||+|+|++|..+++.|.+....++. +.++..+ .+...... +. + ...| . .
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~-~~dr~~~~~~~~~~~~--~~----~------~~~g-------~---~--- 77 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLA-AYDLRFNDPAASGALR--AR----A------AELG-------V---E--- 77 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEE-EECGGGGCTTTHHHHH--HH----H------HHTT-------C---E---
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEE-EEeCCCccccchHHHH--HH----H------HHCC-------C---C---
Confidence 57999999999999999999987425554 4454321 00000000 00 0 0112 1 1
Q ss_pred C-CCCCCCcccccccEEEEecCCcccHHhHHHHH
Q 024565 82 R-NPEEIPWAETGAEYVVESTGVFTDKDKAAAHL 114 (265)
Q Consensus 82 ~-~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~ 114 (265)
. ++++. ..++|+||.|+|.....+.+....
T Consensus 78 ~~s~~e~---~~~aDvVi~avp~~~~~~~~~~i~ 108 (317)
T 4ezb_A 78 PLDDVAG---IACADVVLSLVVGAATKAVAASAA 108 (317)
T ss_dssp EESSGGG---GGGCSEEEECCCGGGHHHHHHHHG
T ss_pred CCCHHHH---HhcCCEEEEecCCHHHHHHHHHHH
Confidence 2 34433 257899999999987777665544
No 164
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.36 E-value=0.0022 Score=55.16 Aligned_cols=32 Identities=31% Similarity=0.531 Sum_probs=26.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||+|+|+|.+|..+++.|.+.. .++. +.++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g-~~V~-~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG-VTVY-AFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 579999999999999999998764 6754 5555
No 165
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.32 E-value=0.0089 Score=51.72 Aligned_cols=31 Identities=35% Similarity=0.583 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
.|||+||.|+||..+++.|.++. ++|. +.++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G-~~V~-v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAG-YELV-VWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEE-EC--
T ss_pred CcEEEEecHHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 58999999999999999999884 6654 4554
No 166
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.32 E-value=0.0039 Score=53.81 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||+|+|+|++|..+++.|.++. .++.. .++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G-~~V~~-~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP-GGVTV-YDI 46 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST-TCEEE-ECS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC-CeEEE-EeC
Confidence 469999999999999999999874 56544 454
No 167
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=96.31 E-value=0.0015 Score=56.06 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|+||+|+|+|.+|..+++.|.+.. .++. +.+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g-~~V~-~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAG-HQLH-VTT 33 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTT-CEEE-ECC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC-CEEE-EEc
Confidence 479999999999999999998774 6764 444
No 168
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.30 E-value=0.0017 Score=56.98 Aligned_cols=102 Identities=18% Similarity=0.121 Sum_probs=56.9
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecccc-ChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFI-TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|+++||.|.|+ |.+|+.+++.|.+++ .++.++..... .......+. . +. ..+ +.+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~---~----l~------~~~---------v~~ 64 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPRSPSKAKIFK---A----LE------DKG---------AII 64 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHH---H----HH------HTT---------CEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCCChhHHHHHH---H----HH------hCC---------cEE
Confidence 44579999999 999999999999886 67777765421 111111000 0 00 011 111
Q ss_pred Eec--CCCCCCCcccc--cccEEEEecCCc---ccHHhHHHHHhCC-CCeEEEcC
Q 024565 79 FGV--RNPEEIPWAET--GAEYVVESTGVF---TDKDKAAAHLKGG-AKKVIISA 125 (265)
Q Consensus 79 ~~~--~~~~~~~~~~~--~~DvV~~at~~~---~~~~~~~~~~~~G-~~~vvis~ 125 (265)
+.. .|++++.-... ++|+||.|++.. .+...++.+.+.| +++++.|.
T Consensus 65 ~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~ 119 (346)
T 3i6i_A 65 VYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSE 119 (346)
T ss_dssp EECCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSC
T ss_pred EEeecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeecc
Confidence 110 12222111113 799999998852 3455677777888 88777653
No 169
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.26 E-value=0.0017 Score=57.77 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=24.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+||+|+|+|.+|..++..|.+.. .+|.. .++
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G-~~V~~-~~r 46 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKC-REVCV-WHM 46 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTE-EEEEE-ECS
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CEEEE-EEC
Confidence 349999999999999999998763 56544 444
No 170
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.23 E-value=0.039 Score=45.26 Aligned_cols=34 Identities=18% Similarity=0.293 Sum_probs=28.2
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+.+||-|.|+ |.+|+.+++.|.++. .+|+.+...
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG-HEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC-CeEEEEECC
Confidence 4579999999 999999999999875 687777644
No 171
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.23 E-value=0.0086 Score=52.13 Aligned_cols=87 Identities=21% Similarity=0.169 Sum_probs=60.7
Q ss_pred ccEEEEE-cc-ChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGIN-GF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~-G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
+.+++|+ |+ |..|..+++.|.++. +++++.+++...... +.| ++++
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~G-~~~v~~VnP~~~g~~----------------------------i~G--~~vy- 60 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEYG-TNLVGGTTPGKGGKT----------------------------HLG--LPVF- 60 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTCTTCE----------------------------ETT--EEEE-
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHCC-CcEEEEeCCCcCcce----------------------------ECC--eeee-
Confidence 4568888 99 999999999998874 776655555311100 112 3454
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
.+.++++ ....+|+++.|+|.....+.++++.++|++.+++
T Consensus 61 -~sl~el~-~~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 61 -NTVKEAK-EQTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp -SSHHHHH-HHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -chHHHhh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2344442 0116999999999999999999999999987554
No 172
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.22 E-value=0.0041 Score=53.23 Aligned_cols=103 Identities=19% Similarity=0.222 Sum_probs=57.3
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccccC---hhhhhhheeecccCCcccccceeeeCCceEEECCEE
Q 024565 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFIT---TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (265)
Q Consensus 1 m~-~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 75 (265)
|+ |++|.|.|+ |.+|+.+++.|.++. .++.++...... ......+. . +. ..+
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~~---~----l~------~~~--------- 57 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLE---S----FK------ASG--------- 57 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHH---H----HH------TTT---------
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccccCHHHHHHHH---H----HH------hCC---------
Confidence 65 689999999 999999999999875 666665543211 11100000 0 00 001
Q ss_pred EEEEec--CCCCCCCcccccccEEEEecCCc---ccHHhHHHHHhCC-CCeEEEcCC
Q 024565 76 VTVFGV--RNPEEIPWAETGAEYVVESTGVF---TDKDKAAAHLKGG-AKKVIISAP 126 (265)
Q Consensus 76 ~~~~~~--~~~~~~~~~~~~~DvV~~at~~~---~~~~~~~~~~~~G-~~~vvis~~ 126 (265)
+.++.. .|++.+.-...++|+||.|++.. .....++.+.++| ++++|.|..
T Consensus 58 v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~ 114 (308)
T 1qyc_A 58 ANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEF 114 (308)
T ss_dssp CEEECCCTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCC
T ss_pred CEEEEeccCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeeccc
Confidence 111110 12222211114789999998853 3456677777888 887776543
No 173
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.22 E-value=0.0046 Score=53.02 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=28.4
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~-~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+ |++|.|.|+ |.+|+.+++.|.++. .++.++...
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 37 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRP 37 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCS
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECC
Confidence 65 689999999 999999999999875 677766543
No 174
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=96.19 E-value=0.0039 Score=52.46 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|||+|+|+|.+|..+++.|.+....+ +.+.+++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~-v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYR-IYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCE-EEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCe-EEEECCC
Confidence 48999999999999999998764234 3555553
No 175
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=96.16 E-value=0.0051 Score=52.26 Aligned_cols=78 Identities=17% Similarity=0.129 Sum_probs=47.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecCC
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 83 (265)
|||+|+|+|.+|..+++.|.+.. .++.. .++. ......+. ..| + ..... .+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~-~~~~--~~~~~~~~----------------~~g--~-----~~~~~--~~ 51 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG-HYLIG-VSRQ--QSTCEKAV----------------ERQ--L-----VDEAG--QD 51 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECSC--HHHHHHHH----------------HTT--S-----CSEEE--SC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC-CEEEE-EECC--HHHHHHHH----------------hCC--C-----Ccccc--CC
Confidence 48999999999999999998774 56544 4543 21111110 001 0 00111 23
Q ss_pred CCCCCcccccccEEEEecCCcccHHhHHHHH
Q 024565 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHL 114 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~ 114 (265)
++++ .++|+||.|+|.....+.+..+.
T Consensus 52 ~~~~----~~~D~vi~av~~~~~~~~~~~l~ 78 (279)
T 2f1k_A 52 LSLL----QTAKIIFLCTPIQLILPTLEKLI 78 (279)
T ss_dssp GGGG----TTCSEEEECSCHHHHHHHHHHHG
T ss_pred HHHh----CCCCEEEEECCHHHHHHHHHHHH
Confidence 3333 46899999999877666666543
No 176
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.14 E-value=0.0074 Score=49.19 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=27.0
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
||.+|.|.|+ |.+|+.+++.|.+..+.+|+.+...
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 3445999999 9999999999993345787776543
No 177
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.13 E-value=0.0083 Score=52.78 Aligned_cols=25 Identities=28% Similarity=0.437 Sum_probs=21.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQR 25 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~ 25 (265)
|+++||+|+|+|.+|..++..|.+.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhc
Confidence 5568999999999999999999765
No 178
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.13 E-value=0.0092 Score=52.00 Aligned_cols=89 Identities=19% Similarity=0.265 Sum_probs=50.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhh-heeecc-cCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY-MFKYDS-VHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
++||+|+|+|.+|..++..|.+.. .++..+. +. ..+.+.. -+..++ .++. ..+. .+.+.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~-r~-~~~~i~~~Gl~~~~~~~g~-------------~~~~--~~~~~- 62 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTG-HCVSVVS-RS-DYETVKAKGIRIRSATLGD-------------YTFR--PAAVV- 62 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTT-CEEEEEC-ST-THHHHHHHCEEEEETTTCC-------------EEEC--CSCEE-
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC-CeEEEEe-CC-hHHHHHhCCcEEeecCCCc-------------EEEe--eeeeE-
Confidence 489999999999999999998764 5665554 32 1221110 000111 0111 1010 11122
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHH
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHL 114 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~ 114 (265)
.+++++ ..++|+||.|++.....+.++.+.
T Consensus 63 -~~~~~~---~~~~DlVilavK~~~~~~~l~~l~ 92 (320)
T 3i83_A 63 -RSAAEL---ETKPDCTLLCIKVVEGADRVGLLR 92 (320)
T ss_dssp -SCGGGC---SSCCSEEEECCCCCTTCCHHHHHT
T ss_pred -CCHHHc---CCCCCEEEEecCCCChHHHHHHHH
Confidence 344444 137899999999988777666553
No 179
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.0058 Score=56.39 Aligned_cols=91 Identities=10% Similarity=0.134 Sum_probs=54.1
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
++.||.|+|+|.+|+.+++.|.++++++++ |.++..+ .+.++ +. .+ + ..+ ...
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~-v~~R~~~ka~~la-----~~-------------~~--~----~~~-~~D 75 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVT-VACRTLANAQALA-----KP-------------SG--S----KAI-SLD 75 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEE-EEESSHHHHHHHH-----GG-------------GT--C----EEE-ECC
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEE-EEECCHHHHHHHH-----Hh-------------cC--C----cEE-EEe
Confidence 357899999999999999999998778754 4444321 22211 00 00 0 000 100
Q ss_pred cCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCC
Q 024565 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 81 ~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~ 118 (265)
..+.+++.-...++|+|+.|+|.+.+......+++.|.
T Consensus 76 ~~d~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~ 113 (467)
T 2axq_A 76 VTDDSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKT 113 (467)
T ss_dssp TTCHHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCC
Confidence 01111110001468999999998877667777888886
No 180
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.11 E-value=0.0052 Score=52.33 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCC-eEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDD-VELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~-~el~~v~~~ 36 (265)
+||+|+|+|.+|..+++.|.+... .++. +.++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~-~~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIY-GYDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEE-EECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEE-EEeC
Confidence 689999999999999999987642 2544 4555
No 181
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=96.05 E-value=0.0032 Score=54.70 Aligned_cols=32 Identities=25% Similarity=0.387 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||+|+|+|.+|..+++.|.+.. .++ .+.++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g-~~V-~~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG-HTV-TVWNR 61 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCE-EEECS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CEE-EEEeC
Confidence 479999999999999999998764 565 44554
No 182
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=96.03 E-value=0.0098 Score=50.06 Aligned_cols=85 Identities=16% Similarity=0.157 Sum_probs=50.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecCC
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 83 (265)
|||+|+|+|.+|..+++.|.+.. +++.. +++.........+. +.| + . .+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g-~~V~~-~~~~~~~~~~~~~~----------------~~g--~-------~----~~ 49 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG-VEVVT-SLEGRSPSTIERAR----------------TVG--V-------T----ET 49 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEE-CCTTCCHHHHHHHH----------------HHT--C-------E----EC
T ss_pred CeEEEEechHHHHHHHHHHHHCC-CeEEE-eCCccCHHHHHHHH----------------HCC--C-------c----CC
Confidence 48999999999999999998774 56655 45421111111000 011 1 1 12
Q ss_pred CCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
+++. ..++|+||.|+|.....+.+....+...+ +++
T Consensus 50 ~~~~---~~~aDvvi~~v~~~~~~~~~~~~~~~~~~-~vi 85 (264)
T 1i36_A 50 SEED---VYSCPVVISAVTPGVALGAARRAGRHVRG-IYV 85 (264)
T ss_dssp CHHH---HHTSSEEEECSCGGGHHHHHHHHHTTCCS-EEE
T ss_pred HHHH---HhcCCEEEEECCCHHHHHHHHHHHHhcCc-EEE
Confidence 3222 15689999999998766666655554333 444
No 183
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.99 E-value=0.013 Score=51.03 Aligned_cols=89 Identities=15% Similarity=0.151 Sum_probs=49.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
++||+|+|+|.+|..++..|.+.. .++..+ .+....+.+.. . +......+..+.. .+... .
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~-~~~~~~~~i~~-----~-------g~~~~~~~~~~~~---~~~~~--~ 79 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILI-ARPQHVQAIEA-----T-------GLRLETQSFDEQV---KVSAS--S 79 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEE-CCHHHHHHHHH-----H-------CEEEECSSCEEEE---CCEEE--S
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEE-EcHhHHHHHHh-----C-------CeEEEcCCCcEEE---eeeee--C
Confidence 589999999999999999998764 566655 33212222110 0 0000011101111 12222 3
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHH
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHL 114 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~ 114 (265)
+++++ .++|+||.|++.....+.++.+.
T Consensus 80 ~~~~~----~~~D~vilavk~~~~~~~l~~l~ 107 (318)
T 3hwr_A 80 DPSAV----QGADLVLFCVKSTDTQSAALAMK 107 (318)
T ss_dssp CGGGG----TTCSEEEECCCGGGHHHHHHHHT
T ss_pred CHHHc----CCCCEEEEEcccccHHHHHHHHH
Confidence 34333 57899999999987666665543
No 184
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.96 E-value=0.0079 Score=49.36 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||+|+|+|.+|+.+++.|.+.. .++.. .++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~~-~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVVV-GSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEEE-EES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 579999999999999999998774 56544 444
No 185
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.96 E-value=0.0077 Score=53.57 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||+|+|+|.+|..++..|.+.. .++. +.++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~-l~~r 60 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVR-LWSY 60 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEE-EECS
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 579999999999999999999774 4544 3344
No 186
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.92 E-value=0.0024 Score=54.80 Aligned_cols=31 Identities=19% Similarity=0.379 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+||+|+|+|.+|..+++.|.+.. .++. +.++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~-~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVT-VWNR 32 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEE-EECS
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEE-EEcC
Confidence 69999999999999999998764 5554 4455
No 187
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.91 E-value=0.0071 Score=52.65 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=29.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
++||+|+|+|++|..++..|...+.++ +.+.|..
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di~ 35 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGD-IVLLDIV 35 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeCC
Confidence 479999999999999999998887667 7777764
No 188
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.91 E-value=0.023 Score=42.53 Aligned_cols=31 Identities=23% Similarity=0.483 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
+.+|.|+|+|.+|+.+++.|.+.. .+++.+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d 36 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG-HEVLAVD 36 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 457999999999999999998874 5655443
No 189
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.89 E-value=0.0064 Score=56.27 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=26.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+++||||+|+|.+|..+++.|.++. ++|. +.++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G-~~V~-v~~r 46 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRG-YTVS-IFNR 46 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTT-CCEE-EECS
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCC-CeEE-EEeC
Confidence 77899999999999999999999874 5654 4444
No 190
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.87 E-value=0.0078 Score=50.40 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=26.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
..+||||+|+|.+|..+++.|.+.. .++.. .++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G-~~V~~-~~r 50 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLG-HEVTI-GTR 50 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEE-EES
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 4689999999999999999999874 56544 444
No 191
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.86 E-value=0.014 Score=51.18 Aligned_cols=35 Identities=34% Similarity=0.386 Sum_probs=28.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 38 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~ 38 (265)
++||+|+|+|.+|..++..|.....++ +.+.|...
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECCH
Confidence 469999999999999999998876447 67777643
No 192
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.83 E-value=0.025 Score=45.61 Aligned_cols=32 Identities=34% Similarity=0.460 Sum_probs=27.4
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|||.|.|+ |.+|+.+++.|.++. .+|+++...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEcC
Confidence 47999999 999999999999885 788777654
No 193
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=95.82 E-value=0.0069 Score=55.96 Aligned_cols=34 Identities=21% Similarity=0.416 Sum_probs=27.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+++||||+|+|.+|..+++.|.++. ++| .+.++
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G-~~V-~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRG-YTV-AIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTT-CCE-EEECS
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCC-CEE-EEEcC
Confidence 66689999999999999999999874 565 45555
No 194
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.80 E-value=0.013 Score=53.72 Aligned_cols=31 Identities=16% Similarity=0.335 Sum_probs=25.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
|+|||+|+|+|++|..++..|.+.. .+|+.+
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G-~~V~~~ 31 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELG-ANVRCI 31 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcC-CEEEEE
Confidence 1379999999999999999999874 676644
No 195
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.76 E-value=0.0077 Score=51.29 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+||+|+|+|.+|..+++.|.+ +.++. +.++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g~~V~-~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--RFPTL-VWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--TSCEE-EECS
T ss_pred CeEEEEcccHHHHHHHHHHhC--CCeEE-EEeC
Confidence 689999999999999999987 56754 5555
No 196
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.74 E-value=0.013 Score=53.72 Aligned_cols=92 Identities=10% Similarity=0.093 Sum_probs=50.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 79 (265)
|++.+|.|+|+|.+|+.+++.|.+.. .+ +.++++..+ .+.++ . .+. + + .....
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G-~~-V~v~~R~~~~a~~la------~---~~~--------~--~-----~~~~~ 54 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSG-IK-VTVACRTLESAKKLS------A---GVQ--------H--S-----TPISL 54 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTT-CE-EEEEESSHHHHHHTT------T---TCT--------T--E-----EEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCc-CE-EEEEECCHHHHHHHH------H---hcC--------C--c-----eEEEe
Confidence 77789999999999999999999754 67 445555321 11111 0 000 0 0 00000
Q ss_pred ecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCC
Q 024565 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~ 118 (265)
.-.+.+++.-...++|+|+.|+|...+......+++.|.
T Consensus 55 Dv~d~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~ 93 (450)
T 1ff9_A 55 DVNDDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKK 93 (450)
T ss_dssp CTTCHHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTC
T ss_pred ecCCHHHHHHHHcCCcEEEECCccccchHHHHHHHhCCC
Confidence 001111110001468999999998777666667777775
No 197
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.70 E-value=0.0047 Score=52.94 Aligned_cols=31 Identities=23% Similarity=0.580 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|||+|+|+|.+|..+++.|.+.. .++. +.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g-~~V~-~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG-YPLI-IYDV 31 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT-CCEE-EECS
T ss_pred CeEEEEeccHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 37999999999999999998774 5654 4555
No 198
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.70 E-value=0.0072 Score=52.10 Aligned_cols=97 Identities=16% Similarity=0.118 Sum_probs=55.8
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecccc-ChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe-
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFI-TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG- 80 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~- 80 (265)
.+|.|.|+ |.+|+.+++.|.++. .++.++..... ....+..+ . ..+ +.++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~l----------~------~~~---------v~~v~~ 65 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRPNSSKTTLLDEF----------Q------SLG---------AIIVKG 65 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECTTCSCHHHHHHH----------H------HTT---------CEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCC-CcEEEEECCCCchhhHHHHh----------h------cCC---------CEEEEe
Confidence 48999999 999999999999875 67776654321 11100000 0 001 01111
Q ss_pred -cCCCCCCCcccccccEEEEecCC---cccHHhHHHHHhCC-CCeEEEcCC
Q 024565 81 -VRNPEEIPWAETGAEYVVESTGV---FTDKDKAAAHLKGG-AKKVIISAP 126 (265)
Q Consensus 81 -~~~~~~~~~~~~~~DvV~~at~~---~~~~~~~~~~~~~G-~~~vvis~~ 126 (265)
-.|++.+.-...++|+||.|++. ......++.+.++| ++++|.|..
T Consensus 66 Dl~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~ 116 (318)
T 2r6j_A 66 ELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDF 116 (318)
T ss_dssp CTTCHHHHHHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCC
T ss_pred cCCCHHHHHHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeecc
Confidence 01222221111478999999874 23556667777788 887776543
No 199
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.69 E-value=0.011 Score=51.94 Aligned_cols=36 Identities=31% Similarity=0.380 Sum_probs=28.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|+++||+|+|+|.+|..++..|..++-.+ +.+.|..
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~-v~l~Di~ 38 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGD-VVLFDIA 38 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCce-EEEEeCC
Confidence 77789999999999999999998876334 4455553
No 200
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.69 E-value=0.0095 Score=52.20 Aligned_cols=37 Identities=35% Similarity=0.446 Sum_probs=29.7
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecccc
Q 024565 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 38 (265)
Q Consensus 1 m~-~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~ 38 (265)
|+ ++||+|+|+|.+|..++..|...+.++ +.+.|...
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di~~ 38 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDIVK 38 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCCH
Confidence 54 579999999999999999999886557 77777643
No 201
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.69 E-value=0.025 Score=52.07 Aligned_cols=33 Identities=24% Similarity=0.438 Sum_probs=26.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
.++||+|+|+|.||..++..|.+.. ++|+. .+.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G-~~V~l-~D~ 68 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVG-ISVVA-VES 68 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT-CEEEE-ECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC-CeEEE-EEC
Confidence 4578999999999999999998874 66654 444
No 202
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.68 E-value=0.03 Score=48.90 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=28.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
++||+|+|+|++|..++..|...+.+.-+.+.|..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 47999999999999999999988645445566653
No 203
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.68 E-value=0.0076 Score=51.46 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=28.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+++|-|.|+ |.+|+.+++.|.++++.++.++...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~ 39 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRN 39 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcC
Confidence 478999999 9999999999998755777777643
No 204
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.67 E-value=0.015 Score=51.06 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=25.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
.+|||+|+|.||+.+++.|... ++++.+..
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~-G~~V~~~d 167 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL-GMHVIGVN 167 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCEEEEEC
Confidence 6899999999999999999877 48877654
No 205
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.67 E-value=0.0035 Score=55.28 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
.+||+|+|+|.+|..+++.|.+.. ++++ +.++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G-~~V~-~~~~ 47 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSG-VDVT-VGLR 47 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTT-CCEE-EECC
T ss_pred CCEEEEECchHHHHHHHHHHHHCc-CEEE-EEEC
Confidence 468999999999999999998774 5654 4444
No 206
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=95.66 E-value=0.0065 Score=52.74 Aligned_cols=33 Identities=27% Similarity=0.337 Sum_probs=26.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|.|||+||.|.||..+++.|.+.. +++. +.+++
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G-~~v~-v~dr~ 35 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAG-YLLN-VFDLV 35 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT-CEEE-EECSS
T ss_pred cCEEEEeeehHHHHHHHHHHHhCC-CeEE-EEcCC
Confidence 579999999999999999999874 5544 55553
No 207
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.63 E-value=0.023 Score=49.96 Aligned_cols=35 Identities=29% Similarity=0.290 Sum_probs=28.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.+||+|+|+|.+|..++..|...+-+.-+.+.|..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 47999999999999999999887655445666653
No 208
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.60 E-value=0.0039 Score=47.63 Aligned_cols=32 Identities=22% Similarity=0.147 Sum_probs=27.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.||+|+|+|.+|+.+++.|.+. +++ +.+.++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~-g~~-v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP-QYK-VTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT-TCE-EEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCE-EEEEcCC
Confidence 6899999999999999998875 588 7777764
No 209
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.59 E-value=0.027 Score=43.38 Aligned_cols=31 Identities=32% Similarity=0.454 Sum_probs=26.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
..+|.|+|+|.+|+.+++.|.+.. .+++.+.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid 49 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG-HSVVVVD 49 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 468999999999999999998875 5766554
No 210
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.58 E-value=0.035 Score=48.09 Aligned_cols=34 Identities=29% Similarity=0.399 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
+||+|+|+|.+|..++..|.+..-..-+.+.++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 7999999999999999999876421223455553
No 211
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.56 E-value=0.0042 Score=53.93 Aligned_cols=33 Identities=18% Similarity=0.499 Sum_probs=26.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
++||||+|+|.+|..+++.|.+.. +++. +.+++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~-~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVA-IWNRS 41 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEE-EECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEE-EEeCC
Confidence 478999999999999999999874 5654 44553
No 212
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.56 E-value=0.031 Score=47.36 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=24.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|||+|+|+|.+|..++..|.+.. .++..+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 30 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG-HEVQGWL 30 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CCEEEEE
Confidence 48999999999999999998774 4655543
No 213
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.53 E-value=0.034 Score=48.04 Aligned_cols=30 Identities=33% Similarity=0.383 Sum_probs=24.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+||||+|+|.||..+++.|. . +++|+.. ++
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v~-d~ 42 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVLQ-DV 42 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEE-CS
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEEE-EC
Confidence 68999999999999999999 6 5776544 44
No 214
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.53 E-value=0.011 Score=51.35 Aligned_cols=31 Identities=16% Similarity=0.310 Sum_probs=23.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
++||+|+|+|.+|..++..|.+.. .++..+.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~ 32 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSG-EDVHFLL 32 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTS-CCEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CeEEEEE
Confidence 479999999999999999998764 4555444
No 215
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.52 E-value=0.01 Score=51.98 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
.+||+|+|+|.+|..+++.|.+.. .+|. +.++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G-~~V~-~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENG-EEVI-LWAR 45 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC-CeEE-EEeC
Confidence 589999999999999999998764 4554 3444
No 216
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.50 E-value=0.0073 Score=52.08 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCC----C-eEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRD----D-VELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p----~-~el~~v~ 34 (265)
+|||+|+|+|.+|..++..|.+.+ + .++..+.
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 479999999999999999998761 3 5665443
No 217
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.48 E-value=0.04 Score=47.69 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe-EEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~-el~~v~~~ 36 (265)
++||+|+|+|.+|..++..|.....+ +++ +.++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~-l~d~ 40 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIV-LEDI 40 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEE-EECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeC
Confidence 47999999999999999999877533 554 5554
No 218
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.46 E-value=0.034 Score=47.62 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=28.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+||-|.|+ |++|+.+++.|.++. .+|.++...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDG-NTPIILTRS 35 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 589999999 999999999999885 677776643
No 219
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=95.46 E-value=0.04 Score=47.47 Aligned_cols=28 Identities=32% Similarity=0.496 Sum_probs=22.9
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCeEEE
Q 024565 3 KVKIGING-FGRIGRLVARVILQRDDVELV 31 (265)
Q Consensus 3 ~i~vgI~G-~G~~G~~l~~~L~~~p~~el~ 31 (265)
+.||+|+| +|.+|..+++.|.+.. .++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G-~~V~ 49 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASG-YPIS 49 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTT-CCEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCC-CeEE
Confidence 35899999 8999999999998764 4543
No 220
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.43 E-value=0.053 Score=49.77 Aligned_cols=84 Identities=18% Similarity=0.212 Sum_probs=60.7
Q ss_pred CccEEEEEccC----hhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEE
Q 024565 2 GKVKIGINGFG----RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (265)
Q Consensus 2 ~~i~vgI~G~G----~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 77 (265)
...+|+|+|++ ..|..+++.|.++..-.+..|+ +. .. + +.| ++
T Consensus 7 ~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVn-P~--~~---------~-------------------i~G--~~ 53 (457)
T 2csu_A 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVN-IK--EE---------E-------------------VQG--VK 53 (457)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEEC-SS--CS---------E-------------------ETT--EE
T ss_pred CCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEEC-CC--CC---------e-------------------ECC--Ee
Confidence 35789999994 6799999999887534444443 32 10 0 012 34
Q ss_pred EEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
++ .+.++++ ..+|+++.|+|.....+.++++.+.|+|.+++
T Consensus 54 ~y--~sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 54 AY--KSVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp CB--SSTTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred cc--CCHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 44 4566663 46999999999999999999999999997775
No 221
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=95.41 E-value=0.017 Score=51.43 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=20.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcC
Q 024565 3 KVKIGINGFGRIGRLVARVILQR 25 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~ 25 (265)
|+||+|+|+|.+|..++..|.+.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHc
Confidence 57999999999999999998764
No 222
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.37 E-value=0.013 Score=51.43 Aligned_cols=36 Identities=28% Similarity=0.303 Sum_probs=27.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|+++||+|+|+|.+|..++..|..++..+ +.+.|..
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~-v~L~Di~ 40 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGD-VVLFDIA 40 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCC
Confidence 67789999999999999999998775335 4455553
No 223
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.32 E-value=0.01 Score=51.21 Aligned_cols=101 Identities=17% Similarity=0.157 Sum_probs=56.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccc-cC--hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEE
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPF-IT--TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 78 (265)
|++|.|.|+ |.+|+.+++.|.++. .++.++.... .. ......+. . +. ..+ + .+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~l~---~----~~------~~~--v-------~~ 60 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLTPDSTPSSVQLRE---E----FR------SMG--V-------TI 60 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCCTTCCHHHHHHHH---H----HH------HTT--C-------EE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcccccChHHHHHHH---H----hh------cCC--c-------EE
Confidence 578999999 999999999999875 6777665432 10 11100000 0 00 001 0 11
Q ss_pred Ee--cCCCCCCCcccccccEEEEecCC---cccHHhHHHHHhCC-CCeEEEcCC
Q 024565 79 FG--VRNPEEIPWAETGAEYVVESTGV---FTDKDKAAAHLKGG-AKKVIISAP 126 (265)
Q Consensus 79 ~~--~~~~~~~~~~~~~~DvV~~at~~---~~~~~~~~~~~~~G-~~~vvis~~ 126 (265)
+. -.|++.+.-...++|+||.|++. ......++.+.++| ++++|.|..
T Consensus 61 v~~D~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~ 114 (321)
T 3c1o_A 61 IEGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDF 114 (321)
T ss_dssp EECCTTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCC
T ss_pred EEecCCCHHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEecccc
Confidence 11 01222221112478999999885 33556677777888 887775543
No 224
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.25 E-value=0.039 Score=44.98 Aligned_cols=24 Identities=21% Similarity=0.320 Sum_probs=20.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRD 26 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p 26 (265)
++||+|+|+|.+|..+++.|.+..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g 42 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG 42 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC
Confidence 579999999999999999998763
No 225
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.22 E-value=0.028 Score=51.99 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
+.||||+|+|.||..++..|.+.. ++|+ +.+++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG-~~V~-l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHG-HQVL-LYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEE-EECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CeEE-EEECC
Confidence 469999999999999999998774 5654 44553
No 226
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.21 E-value=0.0074 Score=51.58 Aligned_cols=32 Identities=28% Similarity=0.265 Sum_probs=26.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|++|.|.|+ |.+|+.+++.|.++. .++.++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 34 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG-NPTYALVR 34 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEEC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC-CcEEEEEC
Confidence 478999999 999999999998875 66666654
No 227
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=95.19 E-value=0.14 Score=44.28 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=27.6
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
++++|-|.|+ |++|+.+++.|.+.. .+|.++..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDN 59 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4689999999 999999999999874 67777654
No 228
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=95.18 E-value=0.017 Score=50.37 Aligned_cols=35 Identities=11% Similarity=0.198 Sum_probs=27.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
++||+|+|+|.+|..++..|...+-+.-+.+.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 57999999999999999998876544445566654
No 229
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.16 E-value=0.032 Score=49.09 Aligned_cols=36 Identities=31% Similarity=0.384 Sum_probs=28.7
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
..+||+|+|+|.+|..++..|+..+.+.-+.+.|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 458999999999999999988887655455666654
No 230
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.15 E-value=0.015 Score=50.83 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=27.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|||+|+|+|.+|..++..|..++-++-+.+.|..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCc
Confidence 5899999999999999999887755445666654
No 231
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.14 E-value=0.053 Score=46.95 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=26.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
+||+|+|+|.+|..++..|.....+.-+.+.|..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4899999999999999999887644335556653
No 232
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.07 E-value=0.1 Score=42.68 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=27.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCe-EEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDV-ELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~-el~~v~~ 35 (265)
.++|-|.|+ |.+|+.+++.|.++..+ +|+.+..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r 52 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 52 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence 468999999 99999999999988643 7766653
No 233
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.03 E-value=0.067 Score=46.89 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=29.2
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
..+||+|+|+|.+|..++..|...+-+.-+.+.|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 357999999999999999999988766555666653
No 234
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.00 E-value=0.019 Score=50.35 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=27.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||+|+|+|.+|..++..|...+.+.-+.+.|.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 4799999999999999999988775544455565
No 235
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.99 E-value=0.029 Score=48.19 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
-.+|+|+|+|.+|+.+++.|.... +++.+. ++
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~-dr 186 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALG-AKVKVG-AR 186 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-ES
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC-CEEEEE-EC
Confidence 368999999999999999998775 676544 44
No 236
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.99 E-value=0.022 Score=46.47 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|||.|+|+|.+|+.+++.|.+.. .+++.+..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g-~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK-YGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 47999999999999999998773 67776653
No 237
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=94.95 E-value=0.06 Score=46.48 Aligned_cols=33 Identities=33% Similarity=0.514 Sum_probs=27.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+|||-|.|+ |.+|+.+++.|.++. .+|+++...
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRP 46 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecC
Confidence 469999999 999999999999874 677777643
No 238
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=94.94 E-value=0.02 Score=50.21 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
-.+|||+|+|.||+.+++.|... ++++.+..
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 170 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF-GMKVLGVS 170 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred cceEEEEEECHHHHHHHHHHHhC-CCEEEEEc
Confidence 36899999999999999999877 47776553
No 239
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.90 E-value=0.028 Score=48.30 Aligned_cols=31 Identities=19% Similarity=0.269 Sum_probs=23.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
++||+|+|+|.+|..++..|.+.. .++..+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g-~~V~~~~ 32 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSL-PHTTLIG 32 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHHCC-CeEEEEE
Confidence 479999999999999999988653 3444443
No 240
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=94.88 E-value=0.029 Score=51.85 Aligned_cols=32 Identities=9% Similarity=0.187 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||||+|+|.+|..+++.|.++. ++| .+.++
T Consensus 2 ~m~IgvIG~G~mG~~lA~~La~~G-~~V-~v~dr 33 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMNDHG-FVV-CAFNR 33 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT-CCE-EEECS
T ss_pred CCeEEEEChHHHHHHHHHHHHHCC-CeE-EEEeC
Confidence 468999999999999999999874 565 45555
No 241
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.85 E-value=0.044 Score=50.41 Aligned_cols=93 Identities=17% Similarity=0.204 Sum_probs=56.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeE--EEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVE--LVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~e--l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
++||.|+|+|-||+.++++|.++++++ =+.+.|+......+.. . .| +.+ ....+ .
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~-----~-------------~g--~~~--~~~~V-d 69 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQ-----Q-------------YG--VSF--KLQQI-T 69 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHH-----H-------------HT--CEE--EECCC-C
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHh-----h-------------cC--Cce--eEEec-c
Confidence 478999999999999999999998774 2233344212211110 0 01 000 00001 0
Q ss_pred cCC----CCCCCcccccccEEEEecCCcccHHhHHHHHhCCCCeEEE
Q 024565 81 VRN----PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 81 ~~~----~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~~~vvi 123 (265)
..+ .+.+ . .+.|+|+.+++...+...++.++++|+ -.+
T Consensus 70 adnv~~~l~aL-l--~~~DvVIN~s~~~~~l~Im~acleaGv--~Yl 111 (480)
T 2ph5_A 70 PQNYLEVIGST-L--EENDFLIDVSIGISSLALIILCNQKGA--LYI 111 (480)
T ss_dssp TTTHHHHTGGG-C--CTTCEEEECCSSSCHHHHHHHHHHHTC--EEE
T ss_pred chhHHHHHHHH-h--cCCCEEEECCccccCHHHHHHHHHcCC--CEE
Confidence 111 1222 1 224999999999999999999999998 666
No 242
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.84 E-value=0.023 Score=49.03 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
-.+|+|+|+|.+|+.+++.|.... +++.+..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 187 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALG-ANVKVGA 187 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC-CEEEEEE
Confidence 368999999999999999998775 6765443
No 243
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.72 E-value=0.047 Score=49.68 Aligned_cols=31 Identities=32% Similarity=0.580 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|||+|+|+|++|..++..|.+.. .+++.+ ++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G-~~V~~~-d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG-HEVIGV-DV 31 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE-EC
Confidence 48999999999999999999874 576554 44
No 244
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.70 E-value=0.03 Score=48.62 Aligned_cols=30 Identities=17% Similarity=0.282 Sum_probs=24.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|||+|+|+|.+|..++..|.+.. .++..+.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~ 30 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG-NEVRIWG 30 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 48999999999999999998764 4655443
No 245
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.63 E-value=0.013 Score=51.16 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=26.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
+.||+|+|+|.+|..++..|...+ +.-+.+.|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g-~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKE-LADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CCeEEEEecc
Confidence 369999999999999999998876 4334455553
No 246
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=94.61 E-value=0.029 Score=49.47 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=24.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
-++|||+|+|.||+.+++.|... ++++.+.
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~-G~~V~~~ 200 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAF-GMSVRYW 200 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEE
Confidence 36899999999999999999876 4776543
No 247
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=94.60 E-value=0.025 Score=47.77 Aligned_cols=31 Identities=13% Similarity=0.388 Sum_probs=26.8
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|||-|.|+ |++|+.+++.|.++. .+|.++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEE-YDIYPFDK 37 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTT-EEEEEECT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCC-CEEEEecc
Confidence 59999999 999999999999874 78777754
No 248
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=94.48 E-value=0.019 Score=50.12 Aligned_cols=31 Identities=26% Similarity=0.363 Sum_probs=26.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
-++|||+|+|.||+.+++.|... ++++.+..
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~-G~~V~~~d 169 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW-GFPLRCWS 169 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-TCCEEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEc
Confidence 36899999999999999999877 47776654
No 249
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.44 E-value=0.032 Score=49.05 Aligned_cols=36 Identities=31% Similarity=0.420 Sum_probs=30.5
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+|+||.|.|+ |++|+.+++.|.+.++.+|.++...
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCC
Confidence 56789999999 9999999999998866888887654
No 250
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.36 E-value=0.041 Score=51.09 Aligned_cols=33 Identities=9% Similarity=0.192 Sum_probs=26.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
..||||+|+|.||..+++.|.++. ++|. +.+++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G-~~V~-v~dr~ 42 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHG-FTVC-AYNRT 42 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEE-EECSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCC-CEEE-EEeCC
Confidence 478999999999999999999874 5654 45553
No 251
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=94.34 E-value=0.043 Score=47.90 Aligned_cols=34 Identities=24% Similarity=0.223 Sum_probs=28.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
+||+|+|+|.+|..++..|..++.+.-+.+.|..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 7999999999999999999887756556666763
No 252
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.32 E-value=0.046 Score=45.92 Aligned_cols=32 Identities=25% Similarity=0.489 Sum_probs=26.6
Q ss_pred EEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEecc
Q 024565 5 KIGINGF-GRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 5 ~vgI~G~-G~~G~~l~~~L~~~-p~~el~~v~~~ 36 (265)
||.|.|+ |.+|+.+++.|.++ ++.++.++...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 34 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRN 34 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcC
Confidence 5889999 99999999999986 46788777643
No 253
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=94.29 E-value=0.052 Score=45.70 Aligned_cols=33 Identities=24% Similarity=0.545 Sum_probs=27.4
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~-p~~el~~v~~~ 36 (265)
++|-|.|+ |.+|+.+++.|.++ ++.++.++...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 35 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRN 35 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcC
Confidence 36999999 99999999999987 56788777643
No 254
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.28 E-value=0.086 Score=46.35 Aligned_cols=33 Identities=27% Similarity=0.277 Sum_probs=27.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+++|.|.|+ |.+|+.+++.|.++. .++.++...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 38 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVHS 38 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECC
Confidence 478999999 999999999998864 677776643
No 255
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=94.09 E-value=0.037 Score=49.02 Aligned_cols=29 Identities=31% Similarity=0.450 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
++|||+|+|.||+.+++.|... ++++.+.
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~-G~~V~~~ 193 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF-GCNLLYH 193 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCEEEEE
T ss_pred CEEeEEEeCHHHHHHHHHHHHC-CCEEEEe
Confidence 6899999999999999999876 4776544
No 256
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.04 E-value=0.073 Score=48.71 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=26.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
.+|++|+|+|++|..++..|.+.. .+|+++.-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G-~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG-HEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 479999999999999999999874 67766543
No 257
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.03 E-value=0.38 Score=44.45 Aligned_cols=33 Identities=18% Similarity=0.369 Sum_probs=28.2
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+|||.|.|+ |++|+.+++.|.+.. .+|+++...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 689999999 999999999999885 677777643
No 258
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.94 E-value=0.034 Score=48.05 Aligned_cols=34 Identities=35% Similarity=0.447 Sum_probs=27.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|||+|+|+|.+|..++..|..++.+.-+.+.|..
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 4899999999999999999887655445566653
No 259
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=93.88 E-value=0.067 Score=47.28 Aligned_cols=27 Identities=30% Similarity=0.493 Sum_probs=23.7
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCC
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDD 27 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~ 27 (265)
|+.+||+|+|+ |.+|..++.+|...+-
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l 49 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGAL 49 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccc
Confidence 66789999998 9999999998887653
No 260
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=93.86 E-value=0.063 Score=46.74 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=26.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEeccc
Q 024565 4 VKIGINGF-GRIGRLVARVILQR-DDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~-p~~el~~v~~~~ 37 (265)
|||+|+|+ |.+|..++.+|..+ +-..-+.+.|..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~ 36 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA 36 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecC
Confidence 58999996 99999999999876 544445555553
No 261
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.84 E-value=0.14 Score=44.59 Aligned_cols=34 Identities=32% Similarity=0.439 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
+||+|+|+|.+|..++..|.......-+.+.|..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 4899999999999999998876433234455553
No 262
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.83 E-value=0.05 Score=40.93 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=26.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|.+|.|+|+|++|+.+++.|.++. .+++.+-.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g-~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG-KKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CeEEEEEC
Confidence 468999999999999999999874 67666543
No 263
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=93.75 E-value=0.08 Score=46.31 Aligned_cols=34 Identities=21% Similarity=0.395 Sum_probs=27.3
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCe-EEEEEec
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDV-ELVAVND 35 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~-el~~v~~ 35 (265)
+.++|-|.|+ |.+|+.+++.|.+.++. +|+.+..
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 3578999999 99999999999987334 7766654
No 264
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.65 E-value=0.049 Score=50.30 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=27.4
Q ss_pred CccEEEEEccChhHHHHHHHHHcC-CCeEEEEEe
Q 024565 2 GKVKIGINGFGRIGRLVARVILQR-DDVELVAVN 34 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~ 34 (265)
+|+||+|+|+|++|..++..|.++ ++.+|+.+.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 467999999999999999999876 367777653
No 265
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.60 E-value=0.026 Score=49.88 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+.||+|+|+|.||..+++.|.+.. .++. ++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G-~~V~-~~dr 39 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN-HSVF-GYNR 39 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 468999999999999999999874 5654 4444
No 266
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.49 E-value=0.071 Score=40.80 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=28.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|...+|.|+|+|++|+.+++.|.+.. .+++.|..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g-~~V~vid~ 34 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRG-QNVTVISN 34 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 77789999999999999999998764 67776654
No 267
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.48 E-value=0.081 Score=45.85 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCC-CeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p-~~el~~v~~~ 36 (265)
|||+|+|+|++|..++..|...+ ..+++ +.|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~-l~D~ 33 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELV-LLDV 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeC
Confidence 48999999999999999998763 34544 4444
No 268
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=93.38 E-value=0.058 Score=49.57 Aligned_cols=33 Identities=27% Similarity=0.293 Sum_probs=26.9
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcC-CCeEEEEE
Q 024565 1 MG-KVKIGINGFGRIGRLVARVILQR-DDVELVAV 33 (265)
Q Consensus 1 m~-~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v 33 (265)
|+ |+||+|+|+|++|..++..|.+. ++.+++.+
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~ 36 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVV 36 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEE
Confidence 54 57999999999999999999876 35776555
No 269
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.38 E-value=0.055 Score=49.94 Aligned_cols=31 Identities=23% Similarity=0.467 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|||||+|+|.+|..+++.|.++. .+|. +.++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~-v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVA-VFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 58999999999999999999875 5654 5555
No 270
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.34 E-value=0.092 Score=38.93 Aligned_cols=31 Identities=26% Similarity=0.530 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
.+||.|+|+|.+|+.+++.|.+.. .+++.+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d 34 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG-HDIVLID 34 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 478999999999999999998874 6766553
No 271
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.16 E-value=0.11 Score=44.10 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.+||+|+|+|.+|+.+++.|.+.. +++ .+++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g-~~V-~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEG-AKV-FLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHT-CEE-EEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcC-CEE-EEEECC
Confidence 368999999999999999998875 454 555553
No 272
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.16 E-value=0.36 Score=39.83 Aligned_cols=86 Identities=15% Similarity=0.130 Sum_probs=51.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
..+|-|+|+|.+|...++.|.+.. .+++.|. +.... .+..+. ..+ .+.. +....
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~G-A~VtVva-p~~~~-~l~~l~----------------~~~-~i~~------i~~~~ 84 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEG-AAITVVA-PTVSA-EINEWE----------------AKG-QLRV------KRKKV 84 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGC-CCEEEEC-SSCCH-HHHHHH----------------HTT-SCEE------ECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEC-CCCCH-HHHHHH----------------HcC-CcEE------EECCC
Confidence 468999999999999999999874 5655444 32221 111111 001 0110 10112
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCC
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~ 118 (265)
.++++ .++|+||-||+.......+....+.|+
T Consensus 85 ~~~dL----~~adLVIaAT~d~~~N~~I~~~ak~gi 116 (223)
T 3dfz_A 85 GEEDL----LNVFFIVVATNDQAVNKFVKQHIKNDQ 116 (223)
T ss_dssp CGGGS----SSCSEEEECCCCTHHHHHHHHHSCTTC
T ss_pred CHhHh----CCCCEEEECCCCHHHHHHHHHHHhCCC
Confidence 23344 579999999998766666665555665
No 273
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.15 E-value=0.098 Score=44.57 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=27.2
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.+.||+|+|+|.+|..+++.+.+.. ++|+. .+++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G-~~V~l-~d~~ 36 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHG-FAVTA-YDIN 36 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CeEEE-EeCC
Confidence 3569999999999999999999884 66544 5553
No 274
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=93.08 E-value=0.042 Score=48.66 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=28.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
..+++|+|+|.+|+.+++.|.....++-+.|.++.
T Consensus 129 ~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~ 163 (350)
T 1x7d_A 129 ARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD 163 (350)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 36899999999999999988654457777888874
No 275
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=93.04 E-value=0.073 Score=47.83 Aligned_cols=97 Identities=9% Similarity=0.045 Sum_probs=50.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcC----CC-e-EEEEEeccccC--hhhhhhheeecccCCcccccceeeeCCceEEECCE
Q 024565 3 KVKIGINGFGRIGRLVARVILQR----DD-V-ELVAVNDPFIT--TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~----p~-~-el~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 74 (265)
+.||+|+|+|..|..++..|.++ +. + .-|.+..+..+ .+.....+......++|- . | +.++ .
T Consensus 34 p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YL-p------g--v~Lp-~ 103 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYL-P------G--ITLP-D 103 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTB-T------T--CCCC-S
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccC-C------C--CcCC-C
Confidence 57999999999999999999853 21 1 11233333212 111111111011112221 1 1 1111 1
Q ss_pred EEEEEecCCCCCCCcccccccEEEEecCCcccHHhHHHHH
Q 024565 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHL 114 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~ 114 (265)
.+... .|.++. ..++|+||+++|+...++.+.++.
T Consensus 104 ~i~~t--~dl~~a---l~~ad~ii~avPs~~~r~~l~~l~ 138 (391)
T 4fgw_A 104 NLVAN--PDLIDS---VKDVDIIVFNIPHQFLPRICSQLK 138 (391)
T ss_dssp SEEEE--SCHHHH---HTTCSEEEECSCGGGHHHHHHHHT
T ss_pred CcEEe--CCHHHH---HhcCCEEEEECChhhhHHHHHHhc
Confidence 23332 344332 257899999999998888777654
No 276
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.00 E-value=0.081 Score=46.07 Aligned_cols=37 Identities=19% Similarity=0.192 Sum_probs=29.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|+++||+|+|+|.+|..++..|..++.+.-+.+.|..
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3457999999999999999999877645556666653
No 277
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=92.99 E-value=0.24 Score=43.48 Aligned_cols=93 Identities=16% Similarity=0.272 Sum_probs=62.0
Q ss_pred ccEEEEEcc-ChhHHHHHHH--HHcCCCeEEEEEeccccCh--hhhhhheeecccCCcccccceeeeCCceEEECCE--E
Q 024565 3 KVKIGINGF-GRIGRLVARV--ILQRDDVELVAVNDPFITT--DYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK--P 75 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~--L~~~p~~el~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~ 75 (265)
.+||-|.|+ |..++.++.. +.++++.++++.+++.... .. +.++.. .
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~--------------------------v~~G~~~~G 63 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQK--------------------------FYWGHKEIL 63 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEE--------------------------EEETTEEEE
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCCccce--------------------------EeccCccCC
Confidence 478999999 9988888877 5677889999999885332 11 100111 2
Q ss_pred EEEEecCCCCCCCcccccccEEEEecCCcccHHhHHHHHh-CCCCeEEE
Q 024565 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK-GGAKKVII 123 (265)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~-~G~~~vvi 123 (265)
+++| .+.+++.=...++|+++.++|.....+.+.+++. +|++.+|+
T Consensus 64 vpvy--~sv~ea~~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vVi 110 (334)
T 3mwd_B 64 IPVF--KNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAI 110 (334)
T ss_dssp EEEE--SSHHHHHHHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEE
T ss_pred ceee--CCHHHHhhcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEE
Confidence 5665 3444431000158999999998877666655666 99987776
No 278
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=92.63 E-value=0.091 Score=46.73 Aligned_cols=32 Identities=28% Similarity=0.291 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeE-EEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVE-LVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~e-l~~v~~~ 36 (265)
-.+|||+|+|.||+.+++.|... +++ +.+ +++
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~-G~~~V~~-~d~ 196 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPF-NPKELLY-YDY 196 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-CCSEEEE-ECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCcEEEE-ECC
Confidence 36899999999999999999876 375 654 444
No 279
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=92.44 E-value=0.029 Score=48.93 Aligned_cols=38 Identities=26% Similarity=0.386 Sum_probs=30.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhh
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDY 42 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~ 42 (265)
.+++|+|+|.+|+.+++.|.....++-+.|.+++ ....
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~ 159 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPE 159 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHH
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHH
Confidence 6899999999999999999874237777888876 4433
No 280
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=92.26 E-value=0.19 Score=41.00 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=30.0
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCC-CeEEEEEec
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRD-DVELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p-~~el~~v~~ 35 (265)
|++++|-|.|+ |.+|+.+++.|.+++ +.+++.+..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 45789999999 999999999999885 688877654
No 281
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=92.18 E-value=0.18 Score=45.04 Aligned_cols=108 Identities=16% Similarity=0.151 Sum_probs=61.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCC-eEEEEEeccccChhhhhhheeecccCCcccccceeeeCC---ceEE--E--CC
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDD---KTLL--F--GE 73 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~-~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~--~--~g 73 (265)
|.+|.|+|. |-||.+.++.+.+||+ |++++++..+ +.+.++...+ .-.+.+- ...+. +.|. + .+
T Consensus 9 ~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag~-nv~~L~~q~~--~f~p~~v----~v~d~~~~~~L~~~l~~~~ 81 (406)
T 1q0q_A 9 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCL--EFSPRYA----VMDDEASAKLLKTMLQQQG 81 (406)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHH--HHCCSEE----EESSHHHHHHHHHHHHHTT
T ss_pred ceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcCC-CHHHHHHHHH--HhCCCEE----EEcCHHHHHHHHHHhhcCC
Confidence 579999999 9999999999999987 9999998753 4444332211 1011111 00000 0000 0 01
Q ss_pred EEEEEEec-CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCC
Q 024565 74 KPVTVFGV-RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 74 ~~~~~~~~-~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~ 118 (265)
..+.++.. ....++. ...++|+|+-+.-...-..-.-.++++|.
T Consensus 82 ~~~~v~~G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK 126 (406)
T 1q0q_A 82 SRTEVLSGQQAACDMA-ALEDVDQVMAAIVGAAGLLPTLAAIRAGK 126 (406)
T ss_dssp CCCEEEESHHHHHHHH-TCTTCCEEEECCSSGGGHHHHHHHHHTTC
T ss_pred CCcEEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCCC
Confidence 11122211 1111110 11468999999887777766777889996
No 282
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=92.17 E-value=0.16 Score=45.14 Aligned_cols=107 Identities=19% Similarity=0.144 Sum_probs=60.3
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCC-eEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEe
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~-~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 80 (265)
|.||.|+|. |-||.+.++.+.+||+ |++++++....+.+.++...+ .-.+.+- ...+.... ....+.++.
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~--~f~p~~v----~v~d~~~~--~~~~~~v~~ 92 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRA--QTGVTNI----AVADEHAA--QRVGDIPYH 92 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHH--HHCCCCE----EESCHHHH--HHHCCCSEE
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHH--HcCCCEE----EEcCHHHh--hhcCCEEEe
Confidence 478999999 9999999999999987 999999982224444332211 1011111 00000000 000011111
Q ss_pred cC-CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCC
Q 024565 81 VR-NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 81 ~~-~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~ 118 (265)
.. ...++. ...++|+|+-+.-...-..-.-.++++|.
T Consensus 93 G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK 130 (398)
T 2y1e_A 93 GSDAATRLV-EQTEADVVLNALVGALGLRPTLAALKTGA 130 (398)
T ss_dssp STTHHHHHH-HHSCCSEEEECCCSGGGHHHHHHHHHHTC
T ss_pred cHHHHHHHh-cCCCCCEEEEeCcCHHHHHHHHHHHHCCC
Confidence 00 011110 01458999999887777766677888996
No 283
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=92.08 E-value=0.18 Score=48.93 Aligned_cols=32 Identities=16% Similarity=0.219 Sum_probs=25.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
.+||||+|+|.||..++..+.+.. ++|+ +.|.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG-~~V~-l~D~ 345 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKG-TPIL-MKDI 345 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CCEEEEECCChhhHHHHHHHHhCC-CEEE-EEEC
Confidence 468999999999999999998874 5654 4444
No 284
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.95 E-value=0.84 Score=38.70 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.|+.|+|+|-+|+.+++.|.+.. .++. |.++.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~-V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVS-VLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEE-EEeCC
Confidence 58999999999999999999886 6654 44443
No 285
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.91 E-value=0.5 Score=41.02 Aligned_cols=87 Identities=18% Similarity=0.080 Sum_probs=50.7
Q ss_pred ccEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEec
Q 024565 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 81 (265)
|+||.++|.|-+|.. ++++|.++. .+|. ++|.......... + .+.| +.++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G-~~V~-~~D~~~~~~~~~~-L---------------~~~g---------i~v~~g 56 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG-FEVS-GCDAKMYPPMSTQ-L---------------EALG---------IDVYEG 56 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT-CEEE-EEESSCCTTHHHH-H---------------HHTT---------CEEEES
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC-CEEE-EEcCCCCcHHHHH-H---------------HhCC---------CEEECC
Confidence 579999999999996 888888774 6544 4554321111000 0 0112 223222
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhHHHHHhCCC
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~ 118 (265)
.+++.+. ..++|+|+-+.+-......+.++.++|+
T Consensus 57 ~~~~~l~--~~~~d~vV~Spgi~~~~p~~~~a~~~gi 91 (326)
T 3eag_A 57 FDAAQLD--EFKADVYVIGNVAKRGMDVVEAILNLGL 91 (326)
T ss_dssp CCGGGGG--SCCCSEEEECTTCCTTCHHHHHHHHTTC
T ss_pred CCHHHcC--CCCCCEEEECCCcCCCCHHHHHHHHcCC
Confidence 3444441 0258999987665555556677888998
No 286
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.89 E-value=0.11 Score=47.93 Aligned_cols=35 Identities=9% Similarity=0.130 Sum_probs=27.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|+|+||||+|+|.||..+++.|.++. ++|. +.+++
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G-~~V~-v~dr~ 36 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHG-FVVC-AFNRT 36 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTT-CCEE-EECSS
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCC-CEEE-EEeCC
Confidence 56789999999999999999999885 5655 44553
No 287
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.71 E-value=0.17 Score=45.29 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
||||+|+|+|.+|..++..|.+..+.+|..+.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 47999999999999999999764456766553
No 288
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=91.62 E-value=0.17 Score=45.96 Aligned_cols=42 Identities=17% Similarity=0.254 Sum_probs=33.1
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHc---CCC-eEEEEEeccccChhhh
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQ---RDD-VELVAVNDPFITTDYM 43 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~---~p~-~el~~v~~~~~~~~~~ 43 (265)
|+|.||.|+|. |-||.+.++.+.+ ||+ +++++++..+ ..+.+
T Consensus 75 ~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~-Nv~lL 121 (488)
T 3au8_A 75 KKPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNK-SVNEL 121 (488)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESS-CHHHH
T ss_pred hcceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCC-CHHHH
Confidence 34678999999 9999999999998 555 9999998753 44433
No 289
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=91.52 E-value=0.075 Score=49.08 Aligned_cols=29 Identities=24% Similarity=0.428 Sum_probs=24.1
Q ss_pred cEEEEEccChhHHHHHHHHHcC-----CCeEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQR-----DDVELVA 32 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~-----p~~el~~ 32 (265)
+||||||+|.+|..+++.|.+. ++++++.
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViV 88 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKI 88 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEE
Confidence 6899999999999999999876 2466543
No 290
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=91.38 E-value=0.17 Score=43.53 Aligned_cols=35 Identities=31% Similarity=0.513 Sum_probs=28.0
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCC-CeEEEEEec
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRD-DVELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p-~~el~~v~~ 35 (265)
|+.|||-|.|+ |.+|+.+++.|.++. +.+++++..
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 77789999999 999999999998764 578777653
No 291
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=91.22 E-value=0.19 Score=43.58 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=24.3
Q ss_pred EEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 5 ~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
||+|+|+|.+|..++..|...+ +.-+.+.|..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~-l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRG-YDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-CSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCC-CCEEEEEcCC
Confidence 7999999999999998887664 3334555653
No 292
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.21 E-value=0.23 Score=42.57 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|.||+|+|+|.+|..++..|.+.. ++|+ +.++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G-~~V~-~~d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATG-HTVV-LVDQ 46 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CeEE-EEEC
Confidence 568999999999999999998874 6765 4454
No 293
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.00 E-value=0.21 Score=37.52 Aligned_cols=32 Identities=28% Similarity=0.560 Sum_probs=26.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
+.+|.|+|+|++|+.+++.|.+.. .+++.+-.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g-~~v~vid~ 38 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD-IPLVVIET 38 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 368999999999999999999764 67776654
No 294
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.99 E-value=0.24 Score=42.92 Aligned_cols=36 Identities=28% Similarity=0.341 Sum_probs=28.2
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 1 m~-~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|. ++||+|+|+|.+|..++..|.+....+ +.+.|..
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~-V~l~D~~ 37 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLAD-VVLFDIA 37 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCce-EEEEeCC
Confidence 53 379999999999999999998775336 5666654
No 295
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=90.94 E-value=0.19 Score=43.33 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=27.8
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEec
Q 024565 1 MG-KVKIGINGF-GRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 1 m~-~i~vgI~G~-G~~G~~l~~~L~~~-p~~el~~v~~ 35 (265)
|+ |++|-|.|+ |.+|+.+++.|.++ ++.+|+++..
T Consensus 1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 65 679999999 99999999999876 3578777754
No 296
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=90.86 E-value=0.19 Score=42.41 Aligned_cols=27 Identities=19% Similarity=0.443 Sum_probs=24.4
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCC
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDD 27 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~ 27 (265)
|+|+||-|.|+ |++|+.+++.|.++..
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 67899999999 9999999999998753
No 297
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.55 E-value=0.091 Score=43.74 Aligned_cols=33 Identities=12% Similarity=0.103 Sum_probs=27.0
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
+++||+|+|+|.+|..+.+.|.+.. .+++.+..
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G-~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVG-HYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTT-CEEEECSS
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCC-CEEEEecC
Confidence 3589999999999999999999874 66665543
No 298
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.41 E-value=0.27 Score=42.98 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=28.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 38 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~ 38 (265)
++||+|+|+|.+|..++..|.....++ +.+.|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELAD-VVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECCh
Confidence 369999999999999999998776457 66777643
No 299
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.38 E-value=0.23 Score=43.25 Aligned_cols=34 Identities=21% Similarity=0.164 Sum_probs=25.8
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.+.||||+|+|.+|..++..|.+.. ++|. +.+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G-~~V~-l~d~~ 38 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGG-FRVK-LYDIE 38 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT-CCEE-EECSC
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCC-CEEE-EEeCC
Confidence 3578999999999999999998874 5654 44553
No 300
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.34 E-value=0.23 Score=39.84 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
+..|+|||+|..|..++..|.++. ++++-+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G-~~V~v~ 31 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAG-HQVHLF 31 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEEE
Confidence 588999999999999999999884 664433
No 301
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.34 E-value=0.25 Score=42.78 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=28.9
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+++||-|.|+ |++|+.+++.|.++. .+|.++...
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNF 58 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 4689999999 999999999999875 777777653
No 302
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=89.95 E-value=0.25 Score=42.14 Aligned_cols=32 Identities=28% Similarity=0.416 Sum_probs=26.2
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEE
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v 33 (265)
|+++||-|.|+ |.+|+.+++.|.+.. .+++.+
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~ 33 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRG-DVELVL 33 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEE
Confidence 77789999999 999999999999874 565554
No 303
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.94 E-value=0.26 Score=45.64 Aligned_cols=31 Identities=19% Similarity=0.370 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
.+|+|+|+|.+|+.+++.+.... +++++ +++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv-~d~ 305 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSV-TEI 305 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 58999999999999999998774 66554 444
No 304
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=89.88 E-value=0.27 Score=42.39 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=28.6
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEecc
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~-p~~el~~v~~~ 36 (265)
+++||-|.|+ |++|+.+++.|.++ ..++++++...
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 3589999999 99999999999876 35888777643
No 305
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.86 E-value=1.1 Score=40.82 Aligned_cols=86 Identities=17% Similarity=0.236 Sum_probs=50.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC-hhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
.||.|+|.|..|..+++.|.++. .+|. ++|.... .......+ ...| +++....
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G-~~V~-~~D~~~~~~~~~~~~L---------------~~~g---------i~~~~g~ 63 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG-AIVT-VNDGKPFDENPTAQSL---------------LEEG---------IKVVCGS 63 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT-CEEE-EEESSCGGGCHHHHHH---------------HHTT---------CEEEESC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEE-EEeCCcccCChHHHHH---------------HhCC---------CEEEECC
Confidence 68999999999999999999885 6554 3444211 00100000 0112 2232223
Q ss_pred CCCCCCccccc-ccEEEEecCCcccHHhHHHHHhCCC
Q 024565 83 NPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 83 ~~~~~~~~~~~-~DvV~~at~~~~~~~~~~~~~~~G~ 118 (265)
+++++ + .+ +|+|+-+.+-..+......+.+.|+
T Consensus 64 ~~~~~-~--~~~~d~vv~spgi~~~~p~~~~a~~~gi 97 (451)
T 3lk7_A 64 HPLEL-L--DEDFCYMIKNPGIPYNNPMVKKALEKQI 97 (451)
T ss_dssp CCGGG-G--GSCEEEEEECTTSCTTSHHHHHHHHTTC
T ss_pred ChHHh-h--cCCCCEEEECCcCCCCChhHHHHHHCCC
Confidence 34333 1 34 8999998776555556777888998
No 306
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=89.44 E-value=0.34 Score=42.46 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
++|||+|+|.||+.+++.|... ++++.+..
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~-G~~V~~~d 171 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHHC-cCEEEEEC
Confidence 6899999999999999999877 47766543
No 307
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.36 E-value=0.44 Score=38.21 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=27.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|||.|.|+ |.+|+.+++.|.++. .+|.++...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG-HEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEec
Confidence 47999999 999999999999885 687777643
No 308
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=89.35 E-value=0.37 Score=42.43 Aligned_cols=29 Identities=31% Similarity=0.452 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
++|||+|+|.||+.+++.|... ++++.+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~~ 202 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF-GLAIHYH 202 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CEEEEEEeChhHHHHHHHHHHC-CCEEEEE
Confidence 6899999999999999999876 4787654
No 309
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.34 E-value=0.38 Score=40.64 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=26.7
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|||-|-|+ |++|+.+++.|.+.. .+|.++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 58999999 999999999999874 68877764
No 310
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=89.08 E-value=0.33 Score=38.62 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=26.5
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCe-EEEEEe
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDV-ELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~-el~~v~ 34 (265)
++||-|.|+ |.+|+.+++.|.++..+ ++..+.
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 468999999 99999999999998753 665554
No 311
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=89.06 E-value=0.38 Score=40.80 Aligned_cols=32 Identities=34% Similarity=0.481 Sum_probs=27.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
++||-|.|+ |++|+.+++.|.++. .+|.++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 39 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG-EEVTVLDD 39 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 689999999 999999999999885 67776654
No 312
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=89.06 E-value=0.42 Score=41.24 Aligned_cols=30 Identities=20% Similarity=0.433 Sum_probs=24.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.++|||+|+|.||+.+++.|.... +++.+.
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~ 153 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAALG-AQVRGF 153 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEEE
Confidence 368999999999999999998764 776543
No 313
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=89.00 E-value=1.9 Score=39.39 Aligned_cols=104 Identities=14% Similarity=0.193 Sum_probs=61.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC--------hhhhhhheeecccC-CcccccceeeeCCceEEECC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT--------TDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGE 73 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g 73 (265)
-.||+|-|+|.+|..+++.|.+. +..+++|.|.+.. ...+..++++-... +... .... . +.+
T Consensus 252 g~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~-----~~~~-~--~~~ 322 (470)
T 2bma_A 252 KQTAVVSGSGNVALYCVQKLLHL-NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIK-----EYLN-H--SST 322 (470)
T ss_dssp GCEEEEECSSHHHHHHHHHHHHT-TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGG-----GGGG-T--CSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHH-----HHHh-h--cCC
Confidence 36899999999999999999887 5899999985311 11222222111100 1111 0000 0 001
Q ss_pred EEEEEEecCCCCCCCcccccccEEEEecC-CcccHHhHHHHHhCCCCeEEE
Q 024565 74 KPVTVFGVRNPEEIPWAETGAEYVVESTG-VFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~DvV~~at~-~~~~~~~~~~~~~~G~~~vvi 123 (265)
... .+.+++ |. .++|+.+-|.- ...+.+.+..+.+.++| +|+
T Consensus 323 --a~~---v~~~~~-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 365 (470)
T 2bma_A 323 --AKY---FPNEKP-WG-VPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVG 365 (470)
T ss_dssp --CEE---CSSCCT-TS-SCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEE
T ss_pred --cEE---ecCcCe-ee-cCccEEEeccccCcCCHHHHHHHHhcCcE-EEE
Confidence 112 123455 74 58999998874 45678888888888886 444
No 314
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=88.96 E-value=0.44 Score=41.67 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
.++|||+|+|.+|+.+++.|.... +++.+ +++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G-~~V~~-~d~ 181 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFN-MRILY-YSR 181 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC-CEEEE-ECC
Confidence 368999999999999999998764 77654 444
No 315
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=88.90 E-value=0.4 Score=41.81 Aligned_cols=31 Identities=32% Similarity=0.529 Sum_probs=25.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
-++|||+|+|.+|+.+++.|.... +++.+..
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d 185 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFG-VQRFLYT 185 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGT-CCEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 368999999999999999998764 6765443
No 316
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.90 E-value=0.37 Score=42.46 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=27.0
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+++||+|+|+ |++|..++..+.......-+.+.|.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC
Confidence 56789999998 9999999988877653322345555
No 317
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=88.70 E-value=0.41 Score=42.28 Aligned_cols=31 Identities=29% Similarity=0.459 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
-++|||+|+|.||+.+++.|... ++++.+..
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 190 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF-GMNVLVWG 190 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEEeECHHHHHHHHHHHhC-CCEEEEEC
Confidence 36899999999999999999877 47876543
No 318
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.63 E-value=0.3 Score=38.27 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcC-CCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~ 34 (265)
..+|.|+|+|.+|..+++.|.+. . .+++.+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid 70 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-KISLGIE 70 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-SCEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-CeEEEEE
Confidence 35899999999999999999865 4 5666554
No 319
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.61 E-value=0.58 Score=37.47 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=24.5
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCeEEEEEe
Q 024565 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 i~vgI~G-~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|||+|+| +|.+|+.+++.|.++. .++..+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~ 31 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGS 31 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 4899999 6999999999999875 6765543
No 320
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=88.55 E-value=0.43 Score=41.71 Aligned_cols=29 Identities=28% Similarity=0.630 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.+|||+|+|.||+.+++.|... ++++.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~ 175 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM-GATVIGE 175 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEE
Confidence 6899999999999999999876 4776544
No 321
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=88.54 E-value=0.46 Score=41.28 Aligned_cols=31 Identities=29% Similarity=0.532 Sum_probs=25.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
-.+|||+|+|.||+.+++.|.... +++.+..
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 176 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGFD-MDIDYFD 176 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 368999999999999999998764 7766543
No 322
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=88.52 E-value=0.35 Score=41.58 Aligned_cols=29 Identities=34% Similarity=0.563 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.+|||+|+|.||+.+++.|... ++++.+.
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~ 151 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF-GMRVIAY 151 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEE
T ss_pred chheeeccCchhHHHHHHHHhh-CcEEEEE
Confidence 6899999999999999999876 4777655
No 323
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=88.51 E-value=0.5 Score=40.92 Aligned_cols=29 Identities=34% Similarity=0.605 Sum_probs=24.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~ 32 (265)
.++|||+|+|.||+.+++.|.... +++.+
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G-~~V~~ 172 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFG-MRVVY 172 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC-CEEEE
Confidence 368999999999999999998774 77654
No 324
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=88.50 E-value=0.39 Score=43.10 Aligned_cols=28 Identities=25% Similarity=0.406 Sum_probs=23.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
|||+|+|+|++|..++..|.+ +.+++.+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G~~V~~~ 28 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--QNEVTIV 28 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC--CCEEEEE
Confidence 489999999999999999987 4776655
No 325
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=88.44 E-value=0.57 Score=40.78 Aligned_cols=81 Identities=12% Similarity=0.274 Sum_probs=48.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecCC
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 83 (265)
-+|.|+|+|.+|...++++.... .+++++.......+. + . +-| .+ .++ .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~-~--~----------------~lG-------a~-~v~--~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQD-A--L----------------SMG-------VK-HFY--TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHH-H--H----------------HTT-------CS-EEE--SS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHH-H--H----------------hcC-------CC-eec--CC
Confidence 47999999999999999888764 687776543222221 1 1 011 00 112 23
Q ss_pred CCCCCcccccccEEEEecCCcccHHhHHHHHhCC
Q 024565 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGG 117 (265)
Q Consensus 84 ~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G 117 (265)
++.+ ..++|+||+|++.....+.+-.+++.|
T Consensus 228 ~~~~---~~~~D~vid~~g~~~~~~~~~~~l~~~ 258 (348)
T 3two_A 228 PKQC---KEELDFIISTIPTHYDLKDYLKLLTYN 258 (348)
T ss_dssp GGGC---CSCEEEEEECCCSCCCHHHHHTTEEEE
T ss_pred HHHH---hcCCCEEEECCCcHHHHHHHHHHHhcC
Confidence 3333 238999999999875555544444444
No 326
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=88.40 E-value=0.44 Score=41.66 Aligned_cols=29 Identities=21% Similarity=0.470 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.+|||+|+|.||+.+++.|... ++++.+.
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~ 174 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF-GAKVIAY 174 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEE
Confidence 6899999999999999999876 4776544
No 327
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=88.34 E-value=0.43 Score=41.54 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=28.1
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~-p~~el~~v~~ 35 (265)
+++|-|.|+ |++|+.+++.|.+. .+.+|+++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 579999999 99999999999984 3688887764
No 328
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=88.29 E-value=0.46 Score=41.83 Aligned_cols=30 Identities=27% Similarity=0.565 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
.+|||+|+|.||+.+++.|... ++++.+..
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~-G~~V~~~d 178 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM-GAKVIAYD 178 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CeEEEEecCHHHHHHHHHHhhC-CCEEEEEC
Confidence 6899999999999999999877 47766553
No 329
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=88.19 E-value=0.54 Score=40.60 Aligned_cols=30 Identities=37% Similarity=0.573 Sum_probs=25.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
-.+|||+|+|.||+.+++.|.... +++.+.
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~ 171 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANALG-MNILLY 171 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CceEEEEccCHHHHHHHHHHHHCC-CEEEEE
Confidence 368999999999999999998774 776544
No 330
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=88.18 E-value=0.5 Score=41.34 Aligned_cols=32 Identities=34% Similarity=0.513 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
-++|||+|+|.||+.+++.|.... +++.+ +++
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G-~~V~~-~d~ 177 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFG-VKLYY-WSR 177 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGT-CEEEE-ECS
T ss_pred cCEEEEEccCHHHHHHHHHHHHCC-CEEEE-ECC
Confidence 368999999999999999998764 77654 444
No 331
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=88.17 E-value=0.5 Score=41.57 Aligned_cols=31 Identities=29% Similarity=0.389 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHH-cCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVIL-QRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~-~~p~~el~~v~~~ 36 (265)
++|||+|+|.||+.+++.+. .. ++++.+ +++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~-G~~V~~-~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL-GMKLVY-YDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEE-ECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc-CCEEEE-ECC
Confidence 68999999999999999998 66 477654 444
No 332
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=88.15 E-value=0.39 Score=42.01 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
-++|||+|+|.||+.+++.|... ++++.+. ++
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~-d~ 176 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW-GATLQYH-EA 176 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS-CCEEEEE-CS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEE-CC
Confidence 36899999999999999998866 4776554 44
No 333
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=88.13 E-value=0.51 Score=41.37 Aligned_cols=31 Identities=32% Similarity=0.516 Sum_probs=25.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
-.+|||+|+|.||+.+++.|... ++++.+..
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~-G~~V~~~d 195 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSF-GMKTIGYD 195 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred cCEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 36899999999999999999876 47876543
No 334
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=88.10 E-value=0.41 Score=42.98 Aligned_cols=32 Identities=25% Similarity=0.516 Sum_probs=25.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe-EEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~-el~~v~~~ 36 (265)
-.+|+|+|+|.+|+.+++.|.... + +++ ++++
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G-~~~V~-v~~r 199 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRG-VRAVL-VANR 199 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHC-CSEEE-EECS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCC-CCEEE-EEeC
Confidence 358999999999999999998764 6 554 4444
No 335
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=88.05 E-value=0.56 Score=40.64 Aligned_cols=30 Identities=37% Similarity=0.552 Sum_probs=25.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
-.+|||+|+|.||+.+++.|.... +++.+.
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~ 171 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAMG-MKVLAY 171 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC-CEEEEE
Confidence 368999999999999999998774 776544
No 336
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=87.83 E-value=0.48 Score=41.04 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=28.1
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
++++|-|.|+ |.+|+.+++.|.+.. .+|+++..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDN 59 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4689999999 999999999999874 67777654
No 337
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=87.83 E-value=0.61 Score=41.05 Aligned_cols=32 Identities=31% Similarity=0.482 Sum_probs=26.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
-++|||+|+|.||+.+++.|... ++++.+ +++
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~-G~~V~~-~d~ 199 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAF-GFNVLF-YDP 199 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEE-ECT
T ss_pred CCEEEEEeECHHHHHHHHHHHHC-CCEEEE-ECC
Confidence 36899999999999999999876 477655 444
No 338
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.80 E-value=0.49 Score=41.45 Aligned_cols=29 Identities=34% Similarity=0.448 Sum_probs=24.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~ 32 (265)
.++|||+|+|.||+.+++.|.... +++.+
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G-~~V~~ 192 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFD-CPISY 192 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTT-CCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEE
Confidence 368999999999999999998764 66544
No 339
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=87.74 E-value=0.52 Score=41.22 Aligned_cols=29 Identities=17% Similarity=0.440 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.+|||+|+|.||+.+++.|... ++++.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~ 175 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF-GAKVITY 175 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEE
Confidence 6899999999999999999876 4776544
No 340
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=87.60 E-value=0.51 Score=40.91 Aligned_cols=27 Identities=26% Similarity=0.393 Sum_probs=23.2
Q ss_pred CC-ccEEEEEcc-ChhHHHHHHHHHcCCC
Q 024565 1 MG-KVKIGINGF-GRIGRLVARVILQRDD 27 (265)
Q Consensus 1 m~-~i~vgI~G~-G~~G~~l~~~L~~~p~ 27 (265)
|+ ++||.|.|+ |.+|..+++.|.+.+.
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~ 29 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEM 29 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCC
Confidence 54 479999999 9999999999988754
No 341
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=87.54 E-value=0.49 Score=42.03 Aligned_cols=29 Identities=31% Similarity=0.580 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.+|||+|+|.||+.+++.|... ++++.+.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f-G~~V~~~ 205 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF-RARIRVF 205 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS-CCEEEEE
T ss_pred CEEEEecCCcccHHHHHhhhhC-CCEEEEE
Confidence 5899999999999999998766 4776654
No 342
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=87.53 E-value=0.53 Score=42.01 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.+|||+|+|.||+.+++.|... ++++.+.
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~ 148 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL-GIRTLLC 148 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEE
Confidence 6899999999999999999877 4776654
No 343
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.48 E-value=0.54 Score=43.04 Aligned_cols=31 Identities=26% Similarity=0.446 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
.|||-|+|+|.+|..+++.|... +.+++.|-
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~-~~~v~vId 33 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE-NNDITIVD 33 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST-TEEEEEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCCEEEEE
Confidence 58999999999999999999866 46776553
No 344
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=87.33 E-value=0.5 Score=40.83 Aligned_cols=35 Identities=11% Similarity=0.003 Sum_probs=28.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.++|+|+|+|.+|+.+++.|.+..+++-+.+.++.
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~ 169 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRT 169 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSS
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 46899999999999999999876346566777764
No 345
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.30 E-value=0.52 Score=41.10 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=28.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||+|+|+|.+|..++..|..++.+.-+.+.|.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 5899999999999999999988775655666666
No 346
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=87.14 E-value=0.58 Score=41.78 Aligned_cols=30 Identities=17% Similarity=0.340 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
-++|||+|+|.||+.+++.|... ++++.+.
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~ 145 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGL-GWKVLVC 145 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHC-CCEEEEE
Confidence 36899999999999999999876 4776543
No 347
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=87.07 E-value=0.67 Score=37.60 Aligned_cols=35 Identities=17% Similarity=0.077 Sum_probs=30.0
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
++.|+.|+|+|-.|+++++.|.+ .++++++..|..
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~-~~~~~vgfiDd~ 45 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRA-CGETVAAIVDAD 45 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHH-TTCCEEEEECSC
T ss_pred CCCCEEEEcCCHHHHHHHHHHHh-CCCEEEEEEeCC
Confidence 45789999999999999999987 468999988863
No 348
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=87.03 E-value=0.42 Score=43.47 Aligned_cols=35 Identities=11% Similarity=0.142 Sum_probs=26.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEec
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~~ 35 (265)
|++++|.|||+|..|...+..|.+. |+.+++-+-.
T Consensus 1 M~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~ 36 (472)
T 3iwa_A 1 MSLKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQ 36 (472)
T ss_dssp ---CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEEC
Confidence 7778999999999999999999875 5678766643
No 349
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=86.94 E-value=0.5 Score=42.65 Aligned_cols=34 Identities=21% Similarity=0.182 Sum_probs=28.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVN 34 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~ 34 (265)
|++++|.|||+|..|...+..|.+. ++.+++-+-
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie 35 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFE 35 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEE
Confidence 7789999999999999999999875 567776664
No 350
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.94 E-value=0.59 Score=42.98 Aligned_cols=30 Identities=13% Similarity=0.334 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.|||+|+|+|++|..++..|.+.. .+|+.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G-~~V~~~ 37 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG-HDVFCL 37 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CceEEEECcCHHHHHHHHHHHhCC-CEEEEE
Confidence 489999999999999999999874 566555
No 351
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=86.87 E-value=0.56 Score=40.84 Aligned_cols=26 Identities=19% Similarity=0.257 Sum_probs=22.7
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCC
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDD 27 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~ 27 (265)
+++||+|+|+ |.+|..++..|..++.
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~ 30 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDM 30 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC
Confidence 3589999999 9999999999988764
No 352
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=86.75 E-value=0.71 Score=39.54 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=28.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|||-|.|+ |++|+.+++.|.++++.+|+++...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999 9999999999998866788777643
No 353
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=86.66 E-value=0.73 Score=40.09 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=25.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||+|+|+ |++|..++..|.+.+.+.-+.+.|.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di 42 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDV 42 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeC
Confidence 579999996 9999999999987754433344554
No 354
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=86.66 E-value=0.55 Score=41.86 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=22.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCe
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDV 28 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~ 28 (265)
++||+|+|+ |.+|..++..|...+-+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~ 58 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVF 58 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcC
Confidence 589999996 99999999999887643
No 355
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=86.63 E-value=0.6 Score=40.88 Aligned_cols=29 Identities=31% Similarity=0.466 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.++||+|+|.||+++++.+... ++++.+.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f-g~~v~~~ 170 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCY 170 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred cEEEEECcchHHHHHHHhhccc-Cceeeec
Confidence 5899999999999999999877 4777654
No 356
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=86.42 E-value=0.76 Score=41.56 Aligned_cols=34 Identities=29% Similarity=0.536 Sum_probs=29.8
Q ss_pred ccEEEEEccChhHHHHHHHHHc-CCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~-~p~~el~~v~~~~ 37 (265)
-.+|+|+|+|.+|+.+++.|.. . +++++++.++.
T Consensus 212 gktvgI~G~G~VG~~vA~~l~~~~-G~kVv~~sD~~ 246 (419)
T 1gtm_A 212 GKTIAIQGYGNAGYYLAKIMSEDF-GMKVVAVSDSK 246 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECSS
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhc-CCEEEEEeCCC
Confidence 3689999999999999999988 6 69999998763
No 357
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=86.32 E-value=0.61 Score=41.95 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=24.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVA 32 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~ 32 (265)
+++||+|+|.||+.+++.+... ++++.+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~-G~~V~~ 173 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL-GMYVYF 173 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEE
Confidence 6899999999999999999876 477654
No 358
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=86.28 E-value=0.74 Score=39.34 Aligned_cols=34 Identities=24% Similarity=0.467 Sum_probs=27.4
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|+.++|-|.|+ |.+|+.+++.|.++. .+|+++..
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKG-YEVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 66689999999 999999999999874 67776654
No 359
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=86.26 E-value=0.83 Score=39.23 Aligned_cols=33 Identities=30% Similarity=0.584 Sum_probs=27.5
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
+|++|-|.|+ |.+|+.+++.|.+.. .+|+++..
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 4689999999 999999999999875 67777754
No 360
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=86.18 E-value=0.27 Score=41.29 Aligned_cols=31 Identities=26% Similarity=0.266 Sum_probs=24.6
Q ss_pred EEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 5 ~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+.|+|+|.+|+.+++.|.+.. ++-+.|+++
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G-~~~I~v~nR 140 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMG-VKDIWVVNR 140 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCCEEEEES
T ss_pred eEEEECcHHHHHHHHHHHHHcC-CCEEEEEeC
Confidence 7999999999999999999874 533445555
No 361
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=86.18 E-value=0.58 Score=42.67 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
|.+|+|+|.||+|..++-.+++. +++++++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~ 50 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL-GHRVVGY 50 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCcEEEE
Confidence 57999999999999999888866 3677765
No 362
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.15 E-value=3.1 Score=37.90 Aligned_cols=86 Identities=15% Similarity=0.088 Sum_probs=52.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEE-ec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF-GV 81 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~ 81 (265)
-++|-|+|+|.+|...++.|.+.. .+++.+. +.... .+..+. ..+ .+ ... ..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~-~~~~~-~~~~l~----------------~~~-~i-------~~~~~~ 64 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAG-ARLTVNA-LTFIP-QFTVWA----------------NEG-ML-------TLVEGP 64 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-BEEEEEE-SSCCH-HHHHHH----------------TTT-SC-------EEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCc-CEEEEEc-CCCCH-HHHHHH----------------hcC-CE-------EEEECC
Confidence 468999999999999999999885 6665554 32222 111110 001 01 111 11
Q ss_pred CCCCCCCcccccccEEEEecCCc-ccHHhHHHHHhCCCC
Q 024565 82 RNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAK 119 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~-~~~~~~~~~~~~G~~ 119 (265)
.+++++ .++|+||-||+.. ........+.+.|+.
T Consensus 65 ~~~~~l----~~~~lVi~at~~~~~n~~i~~~a~~~~i~ 99 (457)
T 1pjq_A 65 FDETLL----DSCWLAIAATDDDTVNQRVSDAAESRRIF 99 (457)
T ss_dssp CCGGGG----TTCSEEEECCSCHHHHHHHHHHHHHTTCE
T ss_pred CCcccc----CCccEEEEcCCCHHHHHHHHHHHHHcCCE
Confidence 122333 4789999999876 466667778888873
No 363
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=86.13 E-value=0.78 Score=42.03 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=26.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
.+.||+|+|+|.||..++..+++. +++|+.. |.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~a-G~~V~l~-D~ 85 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLA-GIETFLV-VR 85 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC-CCeEEEE-EC
Confidence 357999999999999999999987 4666544 44
No 364
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=86.09 E-value=0.76 Score=40.28 Aligned_cols=33 Identities=15% Similarity=0.271 Sum_probs=27.3
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
+++|-|.|+ |.+|+.+++.|.++...+|.++..
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 578999999 999999999999874367776643
No 365
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=86.06 E-value=0.73 Score=40.31 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=24.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
|||.|||+|..|..++..|.++. ++++-+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G-~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG-IKVTIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CCEEEE
Confidence 79999999999999999999884 775544
No 366
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=85.59 E-value=0.61 Score=39.87 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=27.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
|++.+|.|||+|..|..++..|.++ +++++-+
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vi 32 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRS-GLSYVIL 32 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHS-SCCEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCCEEEE
Confidence 7778999999999999999999987 4665544
No 367
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=85.54 E-value=0.84 Score=40.90 Aligned_cols=30 Identities=33% Similarity=0.410 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
-++|||+|+|.||+.+++.|.... +++.+.
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~G-~~V~~~ 220 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPFD-VHLHYT 220 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGT-CEEEEE
T ss_pred CCEEEEEeECHHHHHHHHHHHhCC-CEEEEE
Confidence 368999999999999999998764 776544
No 368
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=85.50 E-value=0.86 Score=38.81 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=26.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|+||-|.|+ |.+|+.+++.|.++. .+|+++..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 378999999 999999999999874 67777653
No 369
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=85.48 E-value=2.4 Score=38.56 Aligned_cols=103 Identities=17% Similarity=0.281 Sum_probs=60.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccCh---h------hhhhheeecccC-CcccccceeeeCCceEEEC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT---D------YMTYMFKYDSVH-GQWKHHELKVKDDKTLLFG 72 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~---~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 72 (265)
-.+|+|-|+|.+|..+++.|.+. +..+++|.|..... + .+..++++-... +.+. ...+ .+ +
T Consensus 230 g~~v~VqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~-----~y~~-~~--~ 300 (449)
T 1bgv_A 230 GKTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQ-----DYAD-KF--G 300 (449)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHH-TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTH-----HHHH-HH--T
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChh-----hccc-cc--C
Confidence 46899999999999999999876 58999998853110 0 111121110000 1111 0000 00 0
Q ss_pred CEEEEEEecCCCCCCCcccccccEEEEec-CCcccHHhHHHHHhCCCCeEEE
Q 024565 73 EKPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 73 g~~~~~~~~~~~~~~~~~~~~~DvV~~at-~~~~~~~~~~~~~~~G~~~vvi 123 (265)
. ..+. .+++ |. .++|+.+-|. +...+.+.+..+...||| +|+
T Consensus 301 a---~~i~---~~e~-~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~ 343 (449)
T 1bgv_A 301 V---QFFP---GEKP-WG-QKVDIIMPCATQNDVDLEQAKKIVANNVK-YYI 343 (449)
T ss_dssp C---EEEE---TCCG-GG-SCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred C---EEeC---chhh-hc-CCcceeeccccccccchhhHHHHHhcCCe-EEE
Confidence 1 1211 3345 74 5899999876 455688889888888996 444
No 370
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.36 E-value=0.74 Score=41.60 Aligned_cols=29 Identities=24% Similarity=0.409 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.+|||+|+|.||+.+++.+... ++++.+.
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~y 185 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL-GMTVRYY 185 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEE
Confidence 5899999999999999999877 4776543
No 371
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=85.16 E-value=1.6 Score=37.03 Aligned_cols=29 Identities=17% Similarity=0.281 Sum_probs=22.9
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v 33 (265)
.++.|+|+ +.+|+.++++|.+. +..++..
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~-gAtVtv~ 180 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNR-NYTVSVC 180 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEEcCChHHHHHHHHHHHHC-CCeEEEE
Confidence 58999999 57999999999887 4665433
No 372
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=85.11 E-value=0.71 Score=41.50 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=27.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEec
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~~ 35 (265)
|+ .||.|+|+|+.|...++.|.+. ++++++-|..
T Consensus 1 M~-K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 1 MA-KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp -C-CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CC-CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 54 5899999999999999999864 6788877654
No 373
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=85.06 E-value=0.84 Score=39.48 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=26.7
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
|||+|+|+ |++|..++..|...+.+.-+.+.|..
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~ 35 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA 35 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCC
Confidence 48999999 99999999999977644445556653
No 374
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=85.05 E-value=0.76 Score=38.95 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=25.2
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++|-|.|+ |++|+.+++.|.++. +++.+...
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~~ 33 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDNL 33 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECCC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEcC
Confidence 68999999 999999999999886 55555543
No 375
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=85.04 E-value=3 Score=36.63 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=26.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
..||.|+|+|-+|.+++..|.... +.-+.|.|.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aG-vg~i~lvD~ 150 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSG-IGEIILIDN 150 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC-CCeEEEECC
Confidence 468999999999999999999764 544555554
No 376
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=84.81 E-value=0.78 Score=39.38 Aligned_cols=34 Identities=18% Similarity=0.419 Sum_probs=27.2
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCC------eEEEEEe
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDD------VELVAVN 34 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~------~el~~v~ 34 (265)
|++++|-|.|+ |.+|+.+++.|.++.. .+|+.+.
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~ 52 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID 52 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEE
Confidence 45679999999 9999999999988752 5666554
No 377
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=84.68 E-value=0.68 Score=39.08 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=27.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcC-CCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~-p~~el~~v~~ 35 (265)
++||-|.|+ |.+|+.+++.|.++ ++.+++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 478999999 99999999999876 4567776654
No 378
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=84.59 E-value=0.84 Score=39.61 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=29.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
..+++|+|+|.+|+.+++.|.+...++.+.|.++.
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 159 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR 159 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC
Confidence 36899999999999999999875458888888875
No 379
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=84.57 E-value=0.95 Score=34.97 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=25.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|.+|.|+|+|.+|.+++..|.+.. .+++-+-
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g-~~v~lie 31 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAG-LKVLVLD 31 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CcEEEEe
Confidence 379999999999999999999873 5655554
No 380
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=84.48 E-value=1.2 Score=39.03 Aligned_cols=32 Identities=28% Similarity=0.356 Sum_probs=27.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|++|-|.|+ |.+|+.+++.|.+.. .+|+++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 61 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG-HYVIASDW 61 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC-CeEEEEEC
Confidence 579999999 999999999999874 67777654
No 381
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=84.44 E-value=3.3 Score=37.69 Aligned_cols=101 Identities=12% Similarity=0.229 Sum_probs=59.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccCh--------hhhhhheee-cccCCcccccceeeeCCceEEECC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITT--------DYMTYMFKY-DSVHGQWKHHELKVKDDKTLLFGE 73 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g 73 (265)
-.||+|=|+|.+|..+++.|.+. +..++++.|..... ..+..+.+. .+..+... .. ....|
T Consensus 235 Gk~vaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~-~~-~~~~g------- 304 (450)
T 4fcc_A 235 GMRVSVSGSGNVAQYAIEKAMEF-GARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVA-DY-AKEFG------- 304 (450)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHH-HH-HHHHT-------
T ss_pred CCEEEEeCCChHHHHHHHHHHhc-CCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccc-cc-cccCC-------
Confidence 36899999999999999999887 58999988764211 111111110 00000000 00 00001
Q ss_pred EEEEEEecCCCCCCCcccccccEEEEec-CCcccHHhHHHHHhCCCCe
Q 024565 74 KPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKK 120 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~DvV~~at-~~~~~~~~~~~~~~~G~~~ 120 (265)
...+ +.+++ |. .++|+.+=|. +...+.+.++.+...|||.
T Consensus 305 --~~~~---~~~~i-~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~ 345 (450)
T 4fcc_A 305 --LVYL---EGQQP-WS-VPVDIALPCATQNELDVDAAHQLIANGVKA 345 (450)
T ss_dssp --CEEE---ETCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE
T ss_pred --cEEe---cCccc-cc-CCccEEeeccccccccHHHHHHHHhcCceE
Confidence 1121 24455 65 5899988875 4556888899988889863
No 382
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=84.43 E-value=0.63 Score=40.61 Aligned_cols=30 Identities=23% Similarity=0.373 Sum_probs=25.8
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v 33 (265)
|||-|.|+ |.+|+.+++.|.+++.++++.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~ 31 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEV 31 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence 48999999 9999999999998876576654
No 383
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=84.34 E-value=0.9 Score=39.26 Aligned_cols=34 Identities=9% Similarity=0.074 Sum_probs=28.2
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+.++|-|.|+ |.+|+.+++.|.++. .+|+++...
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 42 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLT 42 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCC-CeEEEEeCC
Confidence 3579999999 999999999999875 677776543
No 384
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=84.58 E-value=0.2 Score=40.49 Aligned_cols=29 Identities=24% Similarity=0.302 Sum_probs=23.6
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEE
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELV 31 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~ 31 (265)
+.+||+|+|+|.+|..+++.|.+.. .++.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G-~~V~ 46 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCG-YSVV 46 (201)
Confidence 3578999999999999999998763 4544
No 385
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=84.09 E-value=1.1 Score=37.89 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=26.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
.++|-|.|+ |.+|+.+++.|.++. .+|+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 478999999 999999999999875 6776664
No 386
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=83.84 E-value=3.5 Score=35.39 Aligned_cols=27 Identities=15% Similarity=0.294 Sum_probs=21.8
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEE
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELV 31 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~ 31 (265)
.++.|+|+ |.+|+.++++|.+. +.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~-gAtVt 193 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKE-NATVT 193 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT-TCEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCeEE
Confidence 58999999 56899999999887 46644
No 387
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=83.77 E-value=1.1 Score=38.65 Aligned_cols=34 Identities=26% Similarity=0.273 Sum_probs=27.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
+||+|+|+|.+|..++..|..++-+.-+.+.|..
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 34 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 5899999999999999999887655556666663
No 388
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=83.73 E-value=0.85 Score=37.93 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=27.1
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|+|++|-|-|+ |.+|+.+++.|.++. .+|+.+.
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~ 34 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMA-EILRLAD 34 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEe
Confidence 77788999999 999999999999874 5655443
No 389
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=83.70 E-value=0.55 Score=40.00 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=24.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
.++.|+|+|-+|+.+++.|.+.. ++-+.|+++
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G-~~~v~v~~R 149 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIV-RPTLTVANR 149 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTC-CSCCEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CCEEEEEeC
Confidence 57999999999999999999774 532344555
No 390
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=83.54 E-value=1.2 Score=39.35 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=26.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|+.++|.|||+|..|...+..|.++ +.+++-+-
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E 33 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEK-GHQVHIID 33 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEE
Confidence 7678999999999999999999887 36665554
No 391
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=83.49 E-value=1 Score=39.00 Aligned_cols=33 Identities=18% Similarity=0.322 Sum_probs=26.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
.++|-|.|+ |.+|+.+++.|.+....+++++..
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 79 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDN 79 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 368999999 999999999999875366666654
No 392
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=83.37 E-value=1.1 Score=38.27 Aligned_cols=30 Identities=27% Similarity=0.463 Sum_probs=26.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
++|-|.|+ |.+|+.+++.|.+.. .+|+++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-IDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-CEEEEEe
Confidence 68999999 999999999999874 6777765
No 393
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=83.25 E-value=1.5 Score=37.31 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=27.5
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
+.++|-|.|+ |.+|+.+++.|.++. .+|+++..
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 43 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHG-YKVRGTAR 43 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 3478999999 999999999999874 67776654
No 394
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=83.21 E-value=0.9 Score=36.18 Aligned_cols=35 Identities=20% Similarity=0.068 Sum_probs=24.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|+|.|+.|+|+|--|+++++.+.+.. .++++..|.
T Consensus 1 ~~m~~~~I~Gagg~gk~v~~~~~~~~-~~v~~f~Dd 35 (194)
T 3bfp_A 1 ARTEKIYIYGASGHGLVCEDVAKNMG-YKECIFLDD 35 (194)
T ss_dssp CCCSEEEEEC--CHHHHHHHHHHHHT-CSEEEEEC-
T ss_pred CCCccEEEEeCCHHHHHHHHHHHhCC-CeEEEEEeC
Confidence 45678999999778999999886543 666666553
No 395
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=83.15 E-value=1 Score=38.86 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=26.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCe-EEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDV-ELVAV 33 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~-el~~v 33 (265)
|++++|.|||+|..|..++..|.+.. . +++-+
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g-~~~v~li 34 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFG-ITDVIIL 34 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcC-CCcEEEE
Confidence 66689999999999999999998764 4 55444
No 396
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=83.09 E-value=1.3 Score=41.20 Aligned_cols=33 Identities=42% Similarity=0.707 Sum_probs=26.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.++|||+|+|.||+.+++.|... ++++.+. ++.
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~-G~~V~~~-d~~ 174 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF-GAYVVAY-DPY 174 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CTT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEEEE-CCC
Confidence 46899999999999999999877 4776544 443
No 397
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=83.08 E-value=2.4 Score=38.98 Aligned_cols=83 Identities=19% Similarity=0.208 Sum_probs=49.8
Q ss_pred cEEEEEccChhHHH-HHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECCEEEEEEecC
Q 024565 4 VKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (265)
Q Consensus 4 i~vgI~G~G~~G~~-l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 82 (265)
.||.|+|.|.+|.. ++++|.++. .+|. ++|..... .... + ...| +.++...
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G-~~V~-~~D~~~~~-~~~~-l---------------~~~g---------i~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG-YQIS-GSDLAPNS-VTQH-L---------------TALG---------AQIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT-CEEE-EECSSCCH-HHHH-H---------------HHTT---------CEEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC-CeEE-EEECCCCH-HHHH-H---------------HHCC---------CEEECCC
Confidence 68999999999996 899988885 6554 45543221 1110 0 0112 2233223
Q ss_pred CCCCCCcccccccEEEEecCCcccHHhHHHHHhCCC
Q 024565 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (265)
Q Consensus 83 ~~~~~~~~~~~~DvV~~at~~~~~~~~~~~~~~~G~ 118 (265)
+++.+ .++|+|+-+.+-..+...+..+.++|+
T Consensus 75 ~~~~~----~~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 75 RPENV----LDASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CGGGG----TTCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CHHHc----CCCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 44444 468999987665444455667788887
No 398
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=83.02 E-value=1.2 Score=42.29 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=29.4
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++++|-|.|+ |.+|+.+++.|.+.++.+|+++...
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~ 349 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 349 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcC
Confidence 4578999999 9999999999998766788777643
No 399
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=83.01 E-value=1 Score=36.67 Aligned_cols=33 Identities=24% Similarity=0.219 Sum_probs=26.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|+..+|.|+|+|..|.+++..|.++ +.+++-|-
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie 33 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQK-GVRVGLLT 33 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEe
Confidence 6678999999999999999999987 36665554
No 400
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=82.90 E-value=1 Score=38.81 Aligned_cols=32 Identities=34% Similarity=0.483 Sum_probs=27.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|||-|.|+ |.+|+.+++.|.++++.+|+.+..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 37999999 999999999999875678777653
No 401
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=82.64 E-value=2.3 Score=38.70 Aligned_cols=104 Identities=13% Similarity=0.270 Sum_probs=58.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccC--------hhhhhhheeecccC-CcccccceeeeCCceEEECC
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT--------TDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGE 73 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g 73 (265)
-.+|+|-|+|.+|..+++.|.+. +..+++|+|.... ...+..+.++.... +... ..+....+
T Consensus 239 g~~VaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~-~~~~~~~~------- 309 (456)
T 3r3j_A 239 NKKCLVSGSGNVAQYLVEKLIEK-GAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLK-EYLKYSKT------- 309 (456)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHH-TCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGG-GGGGTCSS-------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchh-hhhhcCCC-------
Confidence 36899999999999999999876 4788888885311 11111110000000 0000 00000001
Q ss_pred EEEEEEecCCCCCCCcccccccEEEEec-CCcccHHhHHHHHhCCCCeEEE
Q 024565 74 KPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVII 123 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~DvV~~at-~~~~~~~~~~~~~~~G~~~vvi 123 (265)
...+ +.+++ |. .++|+.+=|. +...+.+.++.+.+.+|| +|+
T Consensus 310 --a~~v---~~~~i-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 310 --AKYF---ENQKP-WN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp --CEEE---CSCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred --ceEe---CCccc-cc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 1121 24455 65 5799998875 556688888888777775 444
No 402
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=82.25 E-value=1.4 Score=37.86 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=24.9
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+||+|+|+ |.+|..++..|...+.+.-+.+.|.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di 34 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI 34 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcC
Confidence 48999995 9999999999987654433444554
No 403
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=82.22 E-value=1.2 Score=39.15 Aligned_cols=31 Identities=19% Similarity=0.433 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
-+|.|+|+|.+|..+++++.... .+++++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 219 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFG-SKVTVIST 219 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 47999999999999999888764 67766654
No 404
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=82.21 E-value=1.6 Score=37.46 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~--p~~el~~v 33 (265)
|.+|.|||+|.+|..++..|.+. .+++++-+
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~ 33 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVW 33 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEE
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEE
Confidence 37999999999999999999882 35776544
No 405
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=82.21 E-value=3.3 Score=35.19 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
..++.|+|+|-+|+.+++.|.+.. +.-+.|.++.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G-~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQ-PASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTC-CSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcC-CCeEEEEECC
Confidence 358999999999999999999874 5334455553
No 406
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=82.20 E-value=1.5 Score=38.68 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=25.7
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
++.+|.|||+|..|..++..|.++ +++++-+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~ 34 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVY 34 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEE
Confidence 357999999999999999999987 4776544
No 407
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=82.13 E-value=1.6 Score=38.49 Aligned_cols=30 Identities=20% Similarity=0.402 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
..+|.|||+|.+|..++..|.++ +++++-+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~ 55 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQN-GIDVSVY 55 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCEEEE
Confidence 46899999999999999999987 4776555
No 408
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=82.12 E-value=1.1 Score=40.47 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=27.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAV 33 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v 33 (265)
|++.+|.|||+|..|...+..|.++ |+.+++-+
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~ 35 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLL 35 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEE
Confidence 7778999999999999999999876 44676555
No 409
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=82.11 E-value=1.1 Score=41.92 Aligned_cols=35 Identities=26% Similarity=0.228 Sum_probs=28.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEec
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~~ 35 (265)
|++++|.|||+|..|...+..|.+. ++.+++-+-.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~ 69 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVER 69 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEEC
Confidence 5578999999999999999998875 5688776643
No 410
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=82.01 E-value=1.7 Score=38.11 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=25.6
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
-+|.|+|+ |.+|...++++......+++++...
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~ 206 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASR 206 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 36899996 9999999988776445787777653
No 411
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=81.88 E-value=1.2 Score=38.66 Aligned_cols=32 Identities=22% Similarity=0.173 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
-||+|+|+|.||..++..++++. ++|+ +.|..
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G-~~V~-l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGG-FRVK-LYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEE-EECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCC-CeEE-EEECC
Confidence 58999999999999999998884 6643 55553
No 412
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=81.85 E-value=1.9 Score=38.81 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=30.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
-.+|+|.|+|.+|+.++++|.+..+..+++|.|..
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~ 243 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELGSKVVAVSDSR 243 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 47899999999999999999873369999999874
No 413
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=81.83 E-value=1.4 Score=38.47 Aligned_cols=32 Identities=16% Similarity=0.057 Sum_probs=25.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
|+.++|.|||+|..|..++..|.++. ++++-+
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G-~~v~vi 40 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNG-WDVRLH 40 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC-CCEEEE
Confidence 34578999999999999999999874 665544
No 414
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=81.79 E-value=1.4 Score=36.65 Aligned_cols=31 Identities=19% Similarity=0.121 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
+.+|.|||+|..|...+..|.++. ++++-+-
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie 32 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRAR-KNILLVD 32 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC-CCEEEEe
Confidence 589999999999999999998874 6665553
No 415
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=81.67 E-value=1 Score=38.99 Aligned_cols=32 Identities=16% Similarity=0.292 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
-+|.|+|+|.+|...++++......+++++..
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~ 204 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIAVDL 204 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 37899999999999999887765577777754
No 416
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=81.66 E-value=1.7 Score=37.22 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=27.7
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
+.++|-|.|+ |.+|+.+++.|.++. .+|+++..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 3478999999 999999999999874 67777654
No 417
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=81.44 E-value=1.2 Score=38.24 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=26.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
++||+|+|+|.+|..++..|.....+.-+.+.|..
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLS 48 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 57999999999999998888766544445566654
No 418
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=81.11 E-value=1.2 Score=37.52 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=26.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
+.+|.|||+|.+|..++..|.++++++++-+-
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viE 70 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIE 70 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEE
Confidence 35899999999999999999987567766554
No 419
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=80.94 E-value=3.2 Score=36.10 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHH-HHHH-HcCCCeE-EEEEecc
Q 024565 4 VKIGINGFGRIGRLV-ARVI-LQRDDVE-LVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l-~~~L-~~~p~~e-l~~v~~~ 36 (265)
-+|.|+|+|.+|... ++++ ... +.+ ++++...
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~ 208 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRR 208 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCC
Confidence 689999999999999 8877 544 566 7777654
No 420
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=80.76 E-value=1.6 Score=37.32 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=26.6
Q ss_pred CccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024565 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 2 ~~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|+++|-|.|+ |.+|+.+++.|.++. .+|+++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG-YLPVVID 33 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 1478999999 999999999999874 6777664
No 421
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=80.65 E-value=1.3 Score=37.60 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=24.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
+.+|.|||+|.+|..++..|.++. ++++-+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G-~~V~vl 31 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAG-HQVHLF 31 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCC-CcEEEE
Confidence 478999999999999999999874 665444
No 422
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=80.60 E-value=2.2 Score=36.37 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=26.8
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
+++|-|.|+ |.+|+.+++.|.++. .+|+.+..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG-YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEec
Confidence 468999999 999999999999884 67766643
No 423
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=80.59 E-value=1.6 Score=37.42 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=25.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
+++|-|.|+ |.+|+.+++.|.++. .+|+++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 578999999 999999999999885 67776654
No 424
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=80.54 E-value=1.9 Score=37.46 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=27.2
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++|-|.|+ |.+|+.+++.|.++. .+|+++...
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG-YEVHGIVRR 57 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-CEEEEEECC
Confidence 68999999 999999999999874 677776643
No 425
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=80.40 E-value=4.8 Score=35.67 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=24.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEe
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~-el~~v~ 34 (265)
-+|.|+|+|.+|...++++.... . +++++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAG-ASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 37999999999999999888764 6 666654
No 426
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.35 E-value=2.2 Score=34.43 Aligned_cols=35 Identities=14% Similarity=0.260 Sum_probs=28.7
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCC-eEEEEEec
Q 024565 1 MGKVKIGINGF-GRIGRLVARVILQRDD-VELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~-G~~G~~l~~~L~~~p~-~el~~v~~ 35 (265)
|++.+|-|.|+ |.+|+.+++.|.++.. .+++.+..
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r 37 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR 37 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec
Confidence 66778999999 9999999999998853 66666553
No 427
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=80.34 E-value=1.4 Score=42.62 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=24.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
+.||+|+|+|.||..++..+.+.. ++|+..
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG-~~V~l~ 341 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSN-YPVILK 341 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCC-CEEEEE
Confidence 468999999999999999999874 665444
No 428
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=80.13 E-value=2 Score=36.55 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=27.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++||-|.|+ |.+|+.+++.|.++. .+|+++...
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 47 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVAR 47 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeCC
Confidence 589999999 999999999999874 687777643
No 429
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=80.05 E-value=2 Score=38.54 Aligned_cols=30 Identities=27% Similarity=0.383 Sum_probs=24.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCe--EEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDV--ELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~--el~~v 33 (265)
..+|+|||+|..|..+++.|.++. . +++.+
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G-~~~~V~v~ 37 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEK-AFDQVTLF 37 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT-CCSEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHhcC-CCCCeEEE
Confidence 469999999999999999999874 4 65544
No 430
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=79.99 E-value=1.9 Score=37.05 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=25.8
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+||.|+|+ |.+|..++..|...+.+.-+.+.|.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 48999999 9999999999987764443455554
No 431
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=79.84 E-value=1.8 Score=36.39 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=26.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|||-|.|+ |.+|+.+++.|.++. .+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 47999999 999999999999885 67776643
No 432
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=79.71 E-value=2 Score=39.14 Aligned_cols=93 Identities=19% Similarity=0.240 Sum_probs=52.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccccChhhhhhheeecccCCcccccceeeeCCceEEECC--EEEEEEec
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE--KPVTVFGV 81 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~ 81 (265)
.||-|+|+|.+|..+++.|.+. .++.-|-........++..+ + + .+.++| .+..++.
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~--~~v~iIE~d~~r~~~la~~l---------~--------~-~~Vi~GD~td~~~L~- 294 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQT--YSVKLIERNLQRAEKLSEEL---------E--------N-TIVFCGDAADQELLT- 294 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEEEEEESCHHHHHHHHHHC---------T--------T-SEEEESCTTCHHHHH-
T ss_pred cEEEEEcchHHHHHHHHHhhhc--CceEEEecCHHHHHHHHHHC---------C--------C-ceEEeccccchhhHh-
Confidence 5899999999999999998754 56555543221223332111 1 0 122222 1111111
Q ss_pred CCCCCCCcccccccEEEEecCCcccHHhH-HHHHhCCCCeEEE
Q 024565 82 RNPEEIPWAETGAEYVVESTGVFTDKDKA-AAHLKGGAKKVII 123 (265)
Q Consensus 82 ~~~~~~~~~~~~~DvV~~at~~~~~~~~~-~~~~~~G~~~vvi 123 (265)
-+.+ .++|+++-+|+.+..-=++ ..+.+.|+++++.
T Consensus 295 --ee~i----~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 295 --EENI----DQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp --HTTG----GGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --hcCc----hhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 1233 5789999999987544332 3445689887765
No 433
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=79.53 E-value=2.4 Score=38.47 Aligned_cols=34 Identities=32% Similarity=0.598 Sum_probs=30.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
-.||+|.|+|.+|+.+++.|.+. +..+++|.|..
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~-GakvVavsD~~ 268 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDH-GARVVAVQDHT 268 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSS
T ss_pred CCEEEEeccCHHHHHHHHHHHHC-CCEEEEEEcCC
Confidence 47899999999999999999987 59999999874
No 434
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=79.51 E-value=0.76 Score=38.07 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=26.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|++|-|.|+ |.+|+.+++.|.++. .+|+.+.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSD 33 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTE-EEEEECC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 578999999 999999999999874 6666554
No 435
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=79.47 E-value=3 Score=36.58 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=23.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEe
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~-el~~v~ 34 (265)
-+|.|+|+|.+|...++++.... . +++++.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 214 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG-ATTVILST 214 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 47999999999999999887664 6 555553
No 436
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=79.41 E-value=2.2 Score=37.18 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=27.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
++|-|.|+ |.+|+.+++.|.+.. .+|+++...
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG-YEVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC
Confidence 68999999 999999999999875 677776543
No 437
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=79.31 E-value=1.9 Score=39.73 Aligned_cols=30 Identities=13% Similarity=0.219 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
-.+|+|+|+|.+|+.+++.|... +++|.+.
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~-G~~V~v~ 306 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGL-GATVWVT 306 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHC-CCEEEEE
Confidence 36899999999999999999877 4776544
No 438
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=79.11 E-value=1.7 Score=38.77 Aligned_cols=33 Identities=18% Similarity=0.450 Sum_probs=28.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|++.||+|+|.|..|+.+++.+.+. +++++.+.
T Consensus 22 m~~~~I~ilGgG~lg~~l~~aa~~l-G~~v~~~d 54 (403)
T 3k5i_A 22 WNSRKVGVLGGGQLGRMLVESANRL-NIQVNVLD 54 (403)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 3467999999999999999999887 48887776
No 439
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=79.05 E-value=2.7 Score=32.94 Aligned_cols=31 Identities=23% Similarity=0.396 Sum_probs=25.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
||||-|.|+ |.+|+.+++.|. + +.+++.+..
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~-g~~V~~~~r 34 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K-KAEVITAGR 34 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T-TSEEEEEES
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C-CCeEEEEec
Confidence 568999999 999999999999 6 577766543
No 440
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=79.00 E-value=2.2 Score=37.60 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=27.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
+.+|+|+|.|..|+.+++.+.+. +++++.+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~l-G~~viv~d 42 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKM-GYKVVVLD 42 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 46899999999999999999988 48887774
No 441
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=78.79 E-value=1.6 Score=39.37 Aligned_cols=35 Identities=23% Similarity=0.163 Sum_probs=30.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
|||.||.|+|.|.+|..+++.+.+. +++++++.+.
T Consensus 4 m~~~kiLI~g~g~~a~~i~~aa~~~-G~~~v~v~~~ 38 (446)
T 3ouz_A 4 MEIKSILIANRGEIALRALRTIKEM-GKKAICVYSE 38 (446)
T ss_dssp TCCCEEEECCCHHHHHHHHHHHHHT-TCEEEEEEEG
T ss_pred cccceEEEECCCHHHHHHHHHHHHc-CCEEEEEEcC
Confidence 7788999999999999999999988 5898888643
No 442
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=78.70 E-value=1.7 Score=39.93 Aligned_cols=37 Identities=27% Similarity=0.224 Sum_probs=23.7
Q ss_pred CCccEEEEEccChh--HHHHHHHHHcCCC--eEEEEEeccc
Q 024565 1 MGKVKIGINGFGRI--GRLVARVILQRDD--VELVAVNDPF 37 (265)
Q Consensus 1 m~~i~vgI~G~G~~--G~~l~~~L~~~p~--~el~~v~~~~ 37 (265)
|+++||+|+|+|.+ |..++..|..... ..-+.+.|..
T Consensus 1 m~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~ 41 (480)
T 1obb_A 1 MPSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDID 41 (480)
T ss_dssp -CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCC
Confidence 77789999999885 6777777764321 2334455553
No 443
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=78.65 E-value=2 Score=38.20 Aligned_cols=33 Identities=9% Similarity=0.088 Sum_probs=27.4
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
+++|-|.|+ |.+|+.+++.|.+. +.+|.++...
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~R~ 102 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGY-SHRIYCFIRA 102 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTT-EEEEEEEEEC
T ss_pred CCEEEEecCCcHHHHHHHHHHHcC-CCEEEEEECC
Confidence 578999999 99999999999655 4777777654
No 444
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=78.31 E-value=1.8 Score=36.01 Aligned_cols=31 Identities=29% Similarity=0.239 Sum_probs=25.4
Q ss_pred EEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 5 ~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
||+|+|+|.+|+.+++.|.+.. ++ +.++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~-v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LE-VWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CC-EEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CE-EEEEECC
Confidence 8999999999999999999875 45 4566653
No 445
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=78.17 E-value=1.6 Score=39.22 Aligned_cols=32 Identities=31% Similarity=0.745 Sum_probs=26.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
..+|-|+|+|++|+.+++.|.++. .+++.|-.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g-~~vvvId~ 35 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG-VKMVVLDH 35 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 367999999999999999999874 77776643
No 446
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=77.99 E-value=2.6 Score=35.87 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=26.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
+++|-|.|+ |++|+.+++.|.+.. .+|.++..
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG-YAVNTTVR 41 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC-CEEEEEEc
Confidence 468999999 999999999999874 67776554
No 447
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=77.98 E-value=2.6 Score=35.60 Aligned_cols=32 Identities=22% Similarity=0.476 Sum_probs=26.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
+++|-|.|+ |.+|+.+++.|.+.. .+|+++..
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 44 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQN-VEVFGTSR 44 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred cceEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 578999999 999999999999874 67777653
No 448
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=77.88 E-value=6.6 Score=33.94 Aligned_cols=31 Identities=16% Similarity=0.247 Sum_probs=24.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEec
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~-el~~v~~ 35 (265)
-+|.|+|+|.+|...++++... +. +++++..
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~ 199 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGS 199 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCSSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCcEEEEECC
Confidence 3689999999999999887766 46 5666543
No 449
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=77.82 E-value=2.4 Score=37.53 Aligned_cols=32 Identities=19% Similarity=0.494 Sum_probs=27.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
-.+|+|+|+|.+|..+++.|.+.. .+++ ++|+
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~G-akVv-v~D~ 204 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEG-AKLV-VTDV 204 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred cCEEEEECchHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 368999999999999999999884 7877 7776
No 450
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=77.80 E-value=4.1 Score=34.37 Aligned_cols=33 Identities=15% Similarity=0.048 Sum_probs=25.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.++.|+|+|-+|+.+++.|.+.. +.-+.|.++.
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G-~~~v~i~~R~ 153 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAG-PSELVIANRD 153 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHcC-CCEEEEEeCC
Confidence 58999999999999999999874 5334555553
No 451
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=77.75 E-value=2.1 Score=36.41 Aligned_cols=31 Identities=19% Similarity=0.233 Sum_probs=24.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
+.+|.|||+|..|...+..|.+. +++++-+-
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie 35 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVD 35 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEe
Confidence 46899999999999999998876 36655443
No 452
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=77.69 E-value=2.3 Score=37.46 Aligned_cols=30 Identities=20% Similarity=0.124 Sum_probs=25.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.++|.|||+|.+|..++..|.++ +++++-+
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~ 52 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQS-GIDCDVY 52 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCEEEE
Confidence 57999999999999999999988 4675544
No 453
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=77.55 E-value=2 Score=38.03 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=25.1
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeE-EEEE
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVE-LVAV 33 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~e-l~~v 33 (265)
+..+|.|||+|.+|..++..|.++ +++ ++-+
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~ 34 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQA-GIGKVTLL 34 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC-CCCeEEEE
Confidence 357999999999999999999887 466 5544
No 454
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=77.52 E-value=1.5 Score=38.18 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=26.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
|++.+|.|||+|.+|..++..|.++. ++++-+
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G-~~V~l~ 33 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYG-LKTLMI 33 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCC-CCEEEE
Confidence 55678999999999999999999874 665544
No 455
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=77.48 E-value=1.6 Score=39.71 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=28.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHc-C-C----CeEEEEEec
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQ-R-D----DVELVAVND 35 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~-~-p----~~el~~v~~ 35 (265)
|++.+|.|||+|..|...+..|.+ + | +++++-+-.
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~ 41 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEM 41 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEES
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEec
Confidence 778899999999999999999887 5 3 577766643
No 456
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=77.32 E-value=1.8 Score=38.41 Aligned_cols=32 Identities=28% Similarity=0.464 Sum_probs=26.1
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
.++|-|.|+ |.+|+++++.|.+....+++.+.
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~ 67 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVD 67 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEE
Confidence 478999999 99999999999988534665554
No 457
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=77.20 E-value=2.7 Score=36.14 Aligned_cols=33 Identities=24% Similarity=0.264 Sum_probs=27.3
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCC----eEEEEEecc
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDD----VELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~----~el~~v~~~ 36 (265)
+||-|.|+ |++|+.+++.|.++.. .+|.++...
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~ 39 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARR 39 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCC
Confidence 58999999 9999999999998753 777776643
No 458
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=77.13 E-value=1.5 Score=40.03 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=25.9
Q ss_pred CCccEEEEEccChh--HHHHHHHHHcCCCe-EEEEEeccc
Q 024565 1 MGKVKIGINGFGRI--GRLVARVILQRDDV-ELVAVNDPF 37 (265)
Q Consensus 1 m~~i~vgI~G~G~~--G~~l~~~L~~~p~~-el~~v~~~~ 37 (265)
|+++||+|+|+|.+ |..++..|...+.+ .-+.+.|..
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~ 42 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLD 42 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSS
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCC
Confidence 45689999999986 67888888765432 234566653
No 459
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=76.89 E-value=1.9 Score=38.70 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=27.9
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcC--CCeEEEEEec
Q 024565 1 MG-KVKIGINGFGRIGRLVARVILQR--DDVELVAVND 35 (265)
Q Consensus 1 m~-~i~vgI~G~G~~G~~l~~~L~~~--p~~el~~v~~ 35 (265)
|+ |.+|.|||+|..|...+..|.+. ++.+++-|..
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~ 38 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISA 38 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECS
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeC
Confidence 54 57999999999999999999872 5678766643
No 460
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=76.87 E-value=1.6 Score=37.69 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=26.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
|...-|.|||+|..|..++..|.++. ++++-+
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G-~~V~v~ 33 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYG-LKTLMI 33 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC-CcEEEE
Confidence 55567999999999999999999884 665544
No 461
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=76.76 E-value=2.8 Score=38.00 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=26.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
-.+|+|+|+|.+|+.+++.|.... +++. ++++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~G-a~Vi-v~D~ 242 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFG-ARVV-VTEV 242 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC-CEEE-EECC
Confidence 368999999999999999998874 7754 4554
No 462
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=76.65 E-value=1.2 Score=39.10 Aligned_cols=31 Identities=23% Similarity=0.460 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
-+|.|+|+|.+|...++++... +.+++++..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~ 226 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTT 226 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeC
Confidence 3799999999999999988766 477666653
No 463
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=76.50 E-value=2.2 Score=35.65 Aligned_cols=30 Identities=23% Similarity=0.332 Sum_probs=25.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|||-|.|+ |++|+.+++.|. . +.++.++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r 31 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P-VGNLIALDV 31 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T-TSEEEEECT
T ss_pred CeEEEECCCCHHHHHHHHHhh-c-CCeEEEecc
Confidence 38999999 999999999999 5 577777643
No 464
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=76.39 E-value=5.2 Score=34.03 Aligned_cols=29 Identities=17% Similarity=0.391 Sum_probs=22.3
Q ss_pred ccEEEEEccCh-hHHHHHHHHHcCC-CeEEE
Q 024565 3 KVKIGINGFGR-IGRLVARVILQRD-DVELV 31 (265)
Q Consensus 3 ~i~vgI~G~G~-~G~~l~~~L~~~p-~~el~ 31 (265)
-.++.|+|+|. +|+.++++|.+.. +..++
T Consensus 158 gk~vvVvG~s~iVG~p~A~lL~~~g~~atVt 188 (281)
T 2c2x_A 158 GAHVVVIGRGVTVGRPLGLLLTRRSENATVT 188 (281)
T ss_dssp TCEEEEECCCTTTHHHHHHHHTSTTTCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHhcCCCCCEEE
Confidence 36899999975 6999999998763 45544
No 465
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=76.37 E-value=2.5 Score=38.01 Aligned_cols=31 Identities=16% Similarity=0.065 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCC-eEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDD-VELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~-~el~~v 33 (265)
|++|.|||+|..|...+..|.+.+. .+++-+
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vl 33 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLV 33 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEE
Confidence 4799999999999999999998752 265544
No 466
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=76.34 E-value=3.1 Score=36.64 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=27.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
..+|+|+|.|.+|+.+++.+.+. +++++.+..
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d~ 45 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEM-GYKIAVLDP 45 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeC
Confidence 35899999999999999999977 488887753
No 467
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=76.32 E-value=2.6 Score=35.06 Aligned_cols=32 Identities=28% Similarity=0.557 Sum_probs=26.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
.+||-|.|+ |++|+.+++.|.++. .+|+++..
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 44 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKN-VEVIPTDV 44 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECT
T ss_pred cceEEEECCCChHHHHHHHHHHhCC-CeEEeccC
Confidence 478999999 999999999999874 77776643
No 468
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=76.30 E-value=2.6 Score=38.43 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=24.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
.+|+|+|+|.+|+.+++.+.... ++|+..
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG-a~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG-ARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998774 775543
No 469
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=76.30 E-value=3.7 Score=33.19 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=26.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
.+|-|.|+ |.+|+.+++.|.++. .+|+.+..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r 33 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAG-HTVIGIDR 33 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 58999999 999999999999874 67666653
No 470
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=76.30 E-value=2.6 Score=36.40 Aligned_cols=31 Identities=23% Similarity=0.350 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCe-EEEEEec
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~-el~~v~~ 35 (265)
-+|.|+|+|.+|..+++++.... . +++++..
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~ 197 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRASG-AGPILVSDP 197 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEECC
Confidence 36999999999999999887764 6 6666653
No 471
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=76.30 E-value=2.7 Score=36.32 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=26.6
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
|++|-|.|+ |.+|+.+++.|.++. .+|+.+..
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKG-YEVHGIKR 33 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 378999999 999999999999875 67766643
No 472
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=76.29 E-value=2 Score=38.49 Aligned_cols=31 Identities=32% Similarity=0.487 Sum_probs=25.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
+.+|.|||+|.+|..++..|.++. ++++-+-
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G-~~V~viE 52 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHD-VDVTVYT 52 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC-CeEEEEc
Confidence 368999999999999999999884 7766554
No 473
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=76.28 E-value=1.3 Score=37.94 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
-+|.|+|+|.+|...++++.... .+++++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG-YVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 47999999999999999887664 6888877
No 474
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=76.21 E-value=2 Score=38.69 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=26.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCeEEEEEe
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVN 34 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~ 34 (265)
|+ ++|.|||+|..|...++.|.+. |+.+++-+-
T Consensus 1 M~-~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie 34 (452)
T 3oc4_A 1 MS-LKIVIIGASFAGISAAIASRKKYPQAEISLID 34 (452)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred CC-CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEE
Confidence 53 7999999999999999999875 678877664
No 475
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=76.18 E-value=1.8 Score=36.83 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=26.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.++.|+|+|-+|+.+++.|.+.. ++-+.|.++.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G-~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHG-VQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CCEEEEEECC
Confidence 58999999999999999999874 6434555553
No 476
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=76.10 E-value=2.9 Score=36.89 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=27.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEeccc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~~ 37 (265)
.+|+|.|+|.+|+.+++.|... +++|+ ++|..
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~-GakVv-vsD~~ 207 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA-GAQLL-VADTD 207 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEE-EEeCC
Confidence 6899999999999999999887 48888 77763
No 477
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=76.05 E-value=2.3 Score=39.08 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
-.+|+|+|+|.+|+.+++.|... ++++.+.
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~-G~~Viv~ 286 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGL-GARVYIT 286 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH-TCEEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-cCEEEEE
Confidence 36899999999999999999877 4776544
No 478
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=75.95 E-value=2.2 Score=38.07 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=27.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcC-CCeEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~~ 35 (265)
+.+|.|||+|..|...+..|.+. ++.+++-|..
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~ 35 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECC
Confidence 47999999999999999999873 4678776644
No 479
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=75.75 E-value=1.6 Score=36.77 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=24.6
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
++.+|.|||+|..|...+..|.++. ++++-+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~li 34 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARAN-LQPVLI 34 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTT-CCCEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCC-CcEEEE
Confidence 3468999999999999999998763 555433
No 480
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=75.61 E-value=2.6 Score=35.31 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=24.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
+.+|.|||+|..|...+..|.++ +++++-+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li 44 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-MLKTLVI 44 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHC-CCcEEEE
Confidence 46999999999999999999887 3665444
No 481
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=75.57 E-value=3.2 Score=38.08 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=23.4
Q ss_pred ccEEEEEccChh-HHHHHHHHHcC-CCe--EEEEEeccc
Q 024565 3 KVKIGINGFGRI-GRLVARVILQR-DDV--ELVAVNDPF 37 (265)
Q Consensus 3 ~i~vgI~G~G~~-G~~l~~~L~~~-p~~--el~~v~~~~ 37 (265)
++||+|+|+|.+ |..++..|..+ +.+ .-+.+.|..
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~ 66 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDND 66 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCC
Confidence 469999999777 66676666655 233 445666663
No 482
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=75.56 E-value=2.7 Score=36.73 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=26.2
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
+++|-|.|+ |++|+.+++.|.++. .+|+++.
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~ 42 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKN-YEVCIVD 42 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEE
Confidence 589999999 999999999999874 6777664
No 483
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=75.50 E-value=3.2 Score=35.35 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=26.2
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcC--CC---eEEEEEec
Q 024565 4 VKIGINGF-GRIGRLVARVILQR--DD---VELVAVND 35 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~--p~---~el~~v~~ 35 (265)
|||-|.|+ |.+|+.+++.|.++ ++ .+++++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 37999999 99999999999874 35 78777654
No 484
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=74.99 E-value=3.1 Score=34.74 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=25.5
Q ss_pred EEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 5 ~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
||-|.|+ |.+|+.+++.|.++...++.++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEcc
Confidence 5889999 999999999999875366766653
No 485
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=74.90 E-value=2.4 Score=37.12 Aligned_cols=30 Identities=27% Similarity=0.212 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcC-CCeEEEEE
Q 024565 4 VKIGINGFGRIGRLVARVILQR-DDVELVAV 33 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v 33 (265)
++|.|||+|.+|..++..|.++ |+++++-+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~ 31 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIV 31 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEE
Confidence 4799999999999999999875 57876544
No 486
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=74.84 E-value=3.1 Score=39.17 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=26.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCeEEEEE
Q 024565 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (265)
Q Consensus 1 m~~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v 33 (265)
|+..+|.|||+|.+|..++..|.++ +++++-+
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~-G~~V~Li 52 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL-GHDVTIY 52 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC-CCCEEEE
Confidence 3457999999999999999999987 4676555
No 487
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=74.81 E-value=1.9 Score=38.10 Aligned_cols=32 Identities=13% Similarity=0.022 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~--p~~el~~v~ 34 (265)
|.+|.|||+|..|...+..|.+. ++.+++-|-
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie 34 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVIN 34 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEe
Confidence 37899999999999999999871 457766554
No 488
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=74.77 E-value=3.4 Score=36.64 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=26.6
Q ss_pred CccEEEEEccChhHHHHHHHHHcC-CCeEEEEEecc
Q 024565 2 GKVKIGINGFGRIGRLVARVILQR-DDVELVAVNDP 36 (265)
Q Consensus 2 ~~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~~~ 36 (265)
||.+|.|||+|..|...++.|.++ .+.+++-+...
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~ 36 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDE 36 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECS
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECC
Confidence 146999999999999999999877 34556666543
No 489
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=74.58 E-value=2.5 Score=36.36 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHHcC-----CCeEEEEEe
Q 024565 4 VKIGINGFGRIGRLVARVILQR-----DDVELVAVN 34 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~-----p~~el~~v~ 34 (265)
|+|.|||+|.+|...+..|.++ |+.+++-+-
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE 36 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYA 36 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEE
Confidence 4799999999999999988876 457766554
No 490
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=74.54 E-value=1.5 Score=38.38 Aligned_cols=32 Identities=16% Similarity=0.397 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
-+|.|+|+|.+|...++++.... .+++++...
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~ 213 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMG-HHVTVISSS 213 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCC
Confidence 37999999999999999887664 677666543
No 491
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=74.42 E-value=2.4 Score=39.25 Aligned_cols=33 Identities=21% Similarity=0.066 Sum_probs=27.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcC-CCeEEEEEec
Q 024565 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~-p~~el~~v~~ 35 (265)
|+||.|||+|..|...++.|.++ ++.+++-+-.
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~ 34 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFER 34 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEEC
Confidence 37999999999999999999875 5678776643
No 492
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=74.39 E-value=3.4 Score=34.71 Aligned_cols=30 Identities=23% Similarity=0.483 Sum_probs=25.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEe
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
|||-|.|+ |.+|+.+++.|.++. .+++++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 31 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG-LEVAVLD 31 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 37999999 999999999999874 6776654
No 493
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=74.36 E-value=2.1 Score=36.07 Aligned_cols=31 Identities=23% Similarity=0.172 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~ 34 (265)
+.+|.|||+|..|...+..|.++ +++++-+-
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie 37 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIE 37 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEE
Confidence 36899999999999999999886 46765553
No 494
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=74.35 E-value=7.6 Score=33.28 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=23.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCeEEEEEecc
Q 024565 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (265)
Q Consensus 4 i~vgI~G~G~~G~~l~~~L~~~p~~el~~v~~~ 36 (265)
-+|.|.|+|.+|...+.++.... .+.+.+++.
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~ 193 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDI 193 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CSEEEEEES
T ss_pred CEEEEECCCCcchHHHHHHHHcC-CcEEEEEec
Confidence 47999999999999998887764 554444444
No 495
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=73.94 E-value=2.9 Score=38.04 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=28.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCC--CeEEEEEecc
Q 024565 3 KVKIGINGF-GRIGRLVARVILQRD--DVELVAVNDP 36 (265)
Q Consensus 3 ~i~vgI~G~-G~~G~~l~~~L~~~p--~~el~~v~~~ 36 (265)
+++|-|.|+ |++|+++++.|.+.+ +.+|..+...
T Consensus 73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~ 109 (478)
T 4dqv_A 73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRA 109 (478)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECC
Confidence 579999999 999999999998874 4688777654
No 496
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=73.90 E-value=2.3 Score=38.80 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~--p~~el~~v~ 34 (265)
+++|.|||+|..|...+..|.+. ++.+++-|-
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie 68 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFD 68 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 37999999999999999999875 457766554
No 497
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=73.74 E-value=2.7 Score=37.41 Aligned_cols=31 Identities=29% Similarity=0.195 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcC-----CCeEEEEE
Q 024565 3 KVKIGINGFGRIGRLVARVILQR-----DDVELVAV 33 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~-----p~~el~~v 33 (265)
+.+|.|||+|..|...+..|.+. |+.+++-+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vl 40 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLV 40 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEE
Confidence 46899999999999999999875 34776555
No 498
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=73.67 E-value=2.8 Score=38.72 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCeEEEEEe
Q 024565 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVN 34 (265)
Q Consensus 3 ~i~vgI~G~G~~G~~l~~~L~~~--p~~el~~v~ 34 (265)
+.+|.|||+|.+|..++..|.++ .+++++-|-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE 38 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIE 38 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 46899999999999999999872 357766554
No 499
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=73.46 E-value=5 Score=35.08 Aligned_cols=31 Identities=10% Similarity=0.027 Sum_probs=25.6
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCeEEEEEec
Q 024565 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~~~p~~el~~v~~ 35 (265)
-+|.|+|+ |.+|...++++... +.+++++.+
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~~ 197 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLS-GYIPIATCS 197 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeC
Confidence 36999999 99999999988766 478887764
No 500
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=73.45 E-value=3.9 Score=35.63 Aligned_cols=31 Identities=26% Similarity=0.457 Sum_probs=26.1
Q ss_pred cEEEEEcc-ChhHHHHHHHHH-cCCCeEEEEEec
Q 024565 4 VKIGINGF-GRIGRLVARVIL-QRDDVELVAVND 35 (265)
Q Consensus 4 i~vgI~G~-G~~G~~l~~~L~-~~p~~el~~v~~ 35 (265)
|+|-|.|+ |.+|+.+++.|. ++. .+|+.+..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g-~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC-CEEEEEec
Confidence 58999999 999999999999 764 67776653
Done!