Your job contains 1 sequence.
>024567
MRQLTYRRKLYGPQPGPLAEGKSVKRSRTQKDYSNSGKGGVKKWLPISGHRRTTNSFWTK
KTWMWRNLLTEKRASLLKITSSLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKS
MTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRYEVKDILEMEMKILEA
LNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYI
ASVYREKDNTAWFEELRVDMNVVSF
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024567
(265 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2152556 - symbol:AT5G48640 species:3702 "Arabi... 695 1.7e-68 1
RGD|70905 - symbol:Ccnc "cyclin C" species:10116 "Rattus ... 409 3.4e-38 1
UNIPROTKB|P39947 - symbol:Ccnc "Cyclin-C" species:10116 "... 409 3.4e-38 1
UNIPROTKB|F1RXY0 - symbol:CCNC "Uncharacterized protein" ... 405 8.9e-38 1
MGI|MGI:1858199 - symbol:Ccnc "cyclin C" species:10090 "M... 404 1.1e-37 1
UNIPROTKB|F1LNZ0 - symbol:Ccnc "Cyclin-C" species:10116 "... 404 1.1e-37 1
UNIPROTKB|P55168 - symbol:CCNC "Cyclin-C" species:9031 "G... 402 1.9e-37 1
UNIPROTKB|Q3ZCK5 - symbol:CCNC "Cyclin-C" species:9913 "B... 402 1.9e-37 1
UNIPROTKB|E5RFK5 - symbol:CCNC "Cyclin-C" species:9606 "H... 402 1.9e-37 1
UNIPROTKB|P24863 - symbol:CCNC "Cyclin-C" species:9606 "H... 402 1.9e-37 1
ZFIN|ZDB-GENE-030131-7369 - symbol:ccnc "cyclin C" specie... 400 3.0e-37 1
UNIPROTKB|Q91031 - symbol:CCNC "Cyclin C" species:9031 "G... 396 8.0e-37 1
UNIPROTKB|F1PGM0 - symbol:CCNC "Uncharacterized protein" ... 396 8.0e-37 1
UNIPROTKB|J3KP90 - symbol:CCNC "Cyclin-C" species:9606 "H... 395 1.0e-36 1
UNIPROTKB|H0YBQ5 - symbol:CCNC "Cyclin-C" species:9606 "H... 379 5.1e-35 1
DICTYBASE|DDB_G0274139 - symbol:cycC "putative C-type cyc... 377 8.3e-35 1
UNIPROTKB|Q29AI1 - symbol:CycC "Cyclin-C" species:46245 "... 367 9.5e-34 1
FB|FBgn0004597 - symbol:CycC "Cyclin C" species:7227 "Dro... 359 6.7e-33 1
UNIPROTKB|G5E954 - symbol:CCNC "Cyclin-C" species:9606 "H... 326 2.1e-29 1
UNIPROTKB|E5RFX8 - symbol:CCNC "Cyclin-C" species:9606 "H... 301 9.4e-27 1
ASPGD|ASPL0000048419 - symbol:AN2172 species:162425 "Emer... 250 2.4e-21 1
SGD|S000004970 - symbol:SSN8 "Cyclin-like component of th... 244 1.0e-20 1
UNIPROTKB|F1NTI7 - symbol:CCNC "Cyclin-C" species:9031 "G... 242 1.7e-20 1
UNIPROTKB|A4RD79 - symbol:SSN8 "RNA polymerase II holoenz... 242 1.7e-20 1
CGD|CAL0004675 - symbol:SSN8 species:5476 "Candida albica... 241 6.9e-20 1
UNIPROTKB|Q5A4H9 - symbol:SSN8 "RNA polymerase II holoenz... 241 6.9e-20 1
POMBASE|SPBC12D12.06 - symbol:srb11 "cyclin CycC, Srb med... 218 5.8e-18 1
TAIR|locus:2122940 - symbol:CYCT1;2 species:3702 "Arabido... 194 2.4e-14 1
TAIR|locus:2122975 - symbol:CYCT1;4 species:3702 "Arabido... 192 1.1e-13 1
POMBASE|SPBC32F12.06 - symbol:pch1 "P-TEFB associated cyc... 188 2.3e-13 1
UNIPROTKB|J9NXY6 - symbol:CCNC "Uncharacterized protein" ... 169 9.6e-13 1
UNIPROTKB|E5RI39 - symbol:CCNC "Cyclin-C" species:9606 "H... 168 1.3e-12 1
FB|FBgn0022936 - symbol:CycH "Cyclin H" species:7227 "Dro... 177 8.2e-12 1
UNIPROTKB|Q5JV82 - symbol:CCNC "Cyclin-C" species:9606 "H... 161 8.8e-12 1
UNIPROTKB|Q90695 - symbol:CCNC "Cyclin C" species:9031 "G... 160 1.2e-11 1
UNIPROTKB|E5RIH8 - symbol:CCNC "Cyclin-C" species:9606 "H... 158 2.0e-11 1
TAIR|locus:2008698 - symbol:CYCT1;1 "cyclin T1;1" species... 166 4.7e-11 1
ZFIN|ZDB-GENE-030131-5126 - symbol:ccnk "cyclin K" specie... 175 4.9e-11 1
UNIPROTKB|Q788V6 - symbol:CCNC "Cyclin-C" species:9031 "G... 154 5.9e-11 1
FB|FBgn0040394 - symbol:CG16903 species:7227 "Drosophila ... 173 1.0e-10 1
TAIR|locus:2153358 - symbol:AT5G45190 species:3702 "Arabi... 172 1.4e-10 1
ZFIN|ZDB-GENE-050320-13 - symbol:ccnh "cyclin H" species:... 164 3.7e-10 1
UNIPROTKB|A9XU13 - symbol:CYCT1b "Cyclin-T1" species:9606... 146 5.0e-10 1
UNIPROTKB|D6RHI7 - symbol:CCNH "Cyclin-H" species:9606 "H... 159 5.1e-10 1
ZFIN|ZDB-GENE-030131-183 - symbol:ccnt2b "cyclin T2b" spe... 167 5.8e-10 1
UNIPROTKB|E2RNV9 - symbol:CCNT2 "Uncharacterized protein"... 168 5.8e-10 1
UNIPROTKB|D6RG18 - symbol:CCNH "Cyclin-H" species:9606 "H... 159 6.0e-10 1
UNIPROTKB|F2Z2C9 - symbol:CCNT2 "Cyclin-T2" species:9606 ... 145 6.5e-10 1
UNIPROTKB|F8WDY7 - symbol:CCNT2 "Cyclin-T2" species:9606 ... 145 6.5e-10 1
UNIPROTKB|E2RNV5 - symbol:CCNT2 "Uncharacterized protein"... 168 6.5e-10 1
UNIPROTKB|G3V2Q3 - symbol:CCNK "Cyclin-K" species:9606 "H... 155 7.2e-10 1
UNIPROTKB|E1B6Z5 - symbol:CCNT2 "Uncharacterized protein"... 167 8.5e-10 1
UNIPROTKB|E2R5P2 - symbol:CCNH "Uncharacterized protein" ... 161 9.2e-10 1
UNIPROTKB|F6V6A9 - symbol:CCNT1 "Uncharacterized protein"... 166 9.4e-10 1
RGD|1309205 - symbol:Ccnt2 "cyclin T2" species:10116 "Rat... 166 1.1e-09 1
MGI|MGI:1328363 - symbol:Ccnt1 "cyclin T1" species:10090 ... 166 1.1e-09 1
RGD|1311151 - symbol:Ccnt1 "cyclin T1" species:10116 "Rat... 166 1.1e-09 1
UNIPROTKB|E2QRW8 - symbol:CCNT1 "Uncharacterized protein"... 166 1.1e-09 1
UNIPROTKB|O60583 - symbol:CCNT2 "Cyclin-T2" species:9606 ... 166 1.1e-09 1
ZFIN|ZDB-GENE-030131-5779 - symbol:ccnt2a "cyclin T2a" sp... 165 1.2e-09 1
UNIPROTKB|F1S0D2 - symbol:F1S0D2 "Uncharacterized protein... 165 1.4e-09 1
ZFIN|ZDB-GENE-030131-4813 - symbol:ccnl1b "cyclin L1b" sp... 163 1.4e-09 1
UNIPROTKB|O60563 - symbol:CCNT1 "Cyclin-T1" species:9606 ... 165 1.5e-09 1
UNIPROTKB|Q9XT26 - symbol:CCNT1 "Cyclin-T1" species:9796 ... 165 1.5e-09 1
UNIPROTKB|F1NPF6 - symbol:CCNL2 "Uncharacterized protein"... 163 1.6e-09 1
UNIPROTKB|Q5ZJP9 - symbol:CCNL1 "Cyclin-L1" species:9031 ... 163 1.6e-09 1
UNIPROTKB|P51946 - symbol:CCNH "Cyclin-H" species:9606 "H... 159 1.6e-09 1
UNIPROTKB|Q4R7U4 - symbol:CCNH "Cyclin-H" species:9541 "M... 159 1.6e-09 1
UNIPROTKB|Q8HXN7 - symbol:CCNT1 "Cyclin-T1" species:9598 ... 164 2.0e-09 1
UNIPROTKB|F1MG12 - symbol:CCNH "Cyclin-H" species:9913 "B... 158 2.1e-09 1
UNIPROTKB|Q3ZBL9 - symbol:CCNH "Cyclin-H" species:9913 "B... 158 2.1e-09 1
UNIPROTKB|E2QYZ5 - symbol:CCNH "Uncharacterized protein" ... 158 2.2e-09 1
UNIPROTKB|Q6T8E9 - symbol:CCNT1 "Cyclin-T1" species:9913 ... 163 2.6e-09 1
UNIPROTKB|F1MIJ6 - symbol:CCNL2 "Uncharacterized protein"... 161 2.7e-09 1
UNIPROTKB|Q96S94 - symbol:CCNL2 "Cyclin-L2" species:9606 ... 161 2.7e-09 1
UNIPROTKB|E2R4K2 - symbol:CCNL2 "Uncharacterized protein"... 161 2.7e-09 1
UNIPROTKB|K7GNA8 - symbol:LOC100520599 "Uncharacterized p... 139 3.1e-09 1
MGI|MGI:1927119 - symbol:Ccnl2 "cyclin L2" species:10090 ... 160 3.5e-09 1
RGD|1309149 - symbol:Ccnl2 "cyclin L2" species:10116 "Rat... 160 3.6e-09 1
UNIPROTKB|Q5I0H5 - symbol:Ccnl2 "Cyclin-L2" species:10116... 160 3.6e-09 1
UNIPROTKB|C9K506 - symbol:CCNH "Uncharacterized protein" ... 155 5.0e-09 1
RGD|69419 - symbol:Ccnh "cyclin H" species:10116 "Rattus ... 155 5.0e-09 1
MGI|MGI:1913921 - symbol:Ccnh "cyclin H" species:10090 "M... 154 6.8e-09 1
UNIPROTKB|C9JPL0 - symbol:CCNL1 "Cyclin-L1" species:9606 ... 156 7.5e-09 1
UNIPROTKB|G3V5E1 - symbol:CCNK "Cyclin-K" species:9606 "H... 155 7.5e-09 1
WB|WBGene00009650 - symbol:ccnk-1 species:6239 "Caenorhab... 150 8.2e-09 1
FB|FBgn0025674 - symbol:CycK "Cyclin K" species:7227 "Dro... 155 8.5e-09 1
ZFIN|ZDB-GENE-030131-6397 - symbol:ccnt1 "cyclin T1" spec... 158 9.4e-09 1
DICTYBASE|DDB_G0268668 - symbol:cycH "putative H-type cyc... 151 1.1e-08 1
UNIPROTKB|E1BJ67 - symbol:CCNL1 "Uncharacterized protein"... 156 1.1e-08 1
UNIPROTKB|Q9UK58 - symbol:CCNL1 "Cyclin-L1" species:9606 ... 156 1.1e-08 1
UNIPROTKB|I3LG02 - symbol:CCNL1 "Uncharacterized protein"... 156 1.1e-08 1
RGD|620864 - symbol:Ccnl1 "cyclin L1" species:10116 "Ratt... 156 1.1e-08 1
UNIPROTKB|Q9R1Q2 - symbol:Ccnl1 "Cyclin-L1" species:10116... 156 1.1e-08 1
MGI|MGI:1922664 - symbol:Ccnl1 "cyclin L1" species:10090 ... 156 1.1e-08 1
MGI|MGI:1276106 - symbol:Ccnk "cyclin K" species:10090 "M... 155 1.5e-08 1
RGD|1595690 - symbol:Ccnk "cyclin K" species:10116 "Rattu... 155 1.5e-08 1
UNIPROTKB|E1C948 - symbol:CCNH "Uncharacterized protein" ... 151 1.5e-08 1
UNIPROTKB|O75909 - symbol:CCNK "Cyclin-K" species:9606 "H... 155 1.7e-08 1
UNIPROTKB|F1NCA1 - symbol:CCNK "Uncharacterized protein" ... 155 1.7e-08 1
WARNING: Descriptions of 38 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2152556 [details] [associations]
symbol:AT5G48640 species:3702 "Arabidopsis thaliana"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA;ISS]
[GO:0010440 "stomatal lineage progression" evidence=RCA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000079 GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 EMBL:AB015468 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 PROSITE:PS00292 EMBL:BX833973
IPI:IPI00545165 RefSeq:NP_199675.2 UniGene:At.50515
ProteinModelPortal:Q9FJK6 SMR:Q9FJK6 PRIDE:Q9FJK6
EnsemblPlants:AT5G48640.1 GeneID:834921 KEGG:ath:AT5G48640
GeneFarm:4108 TAIR:At5g48640 eggNOG:COG5333 HOGENOM:HOG000008007
InParanoid:Q9FJK6 KO:K15161 OMA:ATAITYM PhylomeDB:Q9FJK6
ProtClustDB:CLSN2686764 Genevestigator:Q9FJK6 PANTHER:PTHR10026
Uniprot:Q9FJK6
Length = 253
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 131/170 (77%), Positives = 151/170 (88%)
Query: 94 LAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFY 153
LAQH+KVRQRVVATA+TYMRR Y RKSM E++P LVA TCLYLASKAEES VQAR LVFY
Sbjct: 51 LAQHIKVRQRVVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFY 110
Query: 154 IKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSW 213
IK++Y DE +YE+KDIL MEMK+LEAL+YYLVVFHPYRSL +FLQDA +ND+NM ++W
Sbjct: 111 IKRLYPDEYNKYELKDILGMEMKVLEALDYYLVVFHPYRSLSEFLQDAALNDVNMNQITW 170
Query: 214 GILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
GI+NDTYKMDLILVHPP+ IALACIYIASV+REKD TAWFE+L DMN+V
Sbjct: 171 GIVNDTYKMDLILVHPPYRIALACIYIASVHREKDITAWFEDLHEDMNLV 220
>RGD|70905 [details] [associations]
symbol:Ccnc "cyclin C" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell cycle"
evidence=TAS] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA;ISO] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905
GO:GO:0000079 GO:GO:0006355 GO:GO:0006351 GO:GO:0007049
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
PANTHER:PTHR10026 HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX GO:GO:0016592
EMBL:D14013 IPI:IPI00199131 UniGene:Rn.106758
ProteinModelPortal:P39947 STRING:P39947 UCSC:RGD:70905
InParanoid:P39947 ArrayExpress:P39947 Genevestigator:P39947
GermOnline:ENSRNOG00000007719 Uniprot:P39947
Length = 278
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 88/222 (39%), Positives = 134/222 (60%)
Query: 56 SFWTKKTWM-WRNLLTEKRASLLKITSS-----LRCRCPTIYRNLAQHVKVRQRVVATAV 109
+FW ++ W +L ++R LK S L+ + + L +H+K+RQ+V+ATA
Sbjct: 4 NFWQSSHYLQW--ILDKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATAT 61
Query: 110 TYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEE-------STVQARLLVFYIKKIYSDEK 162
Y +R Y R S+ DP L+APTC++LASK EE S + A V + Y+ K
Sbjct: 62 VYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIAATTSVLKTRFSYASPK 121
Query: 163 -YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYK 221
+ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+NDTY+
Sbjct: 122 EFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDV-LLPLAWRIVNDTYR 180
Query: 222 MDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 181 TDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 222
>UNIPROTKB|P39947 [details] [associations]
symbol:Ccnc "Cyclin-C" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905
GO:GO:0000079 GO:GO:0006355 GO:GO:0006351 GO:GO:0007049
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
PANTHER:PTHR10026 HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX
GO:GO:0016592 EMBL:D14013 IPI:IPI00199131 UniGene:Rn.106758
ProteinModelPortal:P39947 STRING:P39947 UCSC:RGD:70905
InParanoid:P39947 ArrayExpress:P39947 Genevestigator:P39947
GermOnline:ENSRNOG00000007719 Uniprot:P39947
Length = 278
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 88/222 (39%), Positives = 134/222 (60%)
Query: 56 SFWTKKTWM-WRNLLTEKRASLLKITSS-----LRCRCPTIYRNLAQHVKVRQRVVATAV 109
+FW ++ W +L ++R LK S L+ + + L +H+K+RQ+V+ATA
Sbjct: 4 NFWQSSHYLQW--ILDKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATAT 61
Query: 110 TYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEE-------STVQARLLVFYIKKIYSDEK 162
Y +R Y R S+ DP L+APTC++LASK EE S + A V + Y+ K
Sbjct: 62 VYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIAATTSVLKTRFSYASPK 121
Query: 163 -YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYK 221
+ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+NDTY+
Sbjct: 122 EFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDV-LLPLAWRIVNDTYR 180
Query: 222 MDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 181 TDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 222
>UNIPROTKB|F1RXY0 [details] [associations]
symbol:CCNC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016592 "mediator complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0016591 "DNA-directed
RNA polymerase II, holoenzyme" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 OMA:FFANVIQ
GO:GO:0016592 EMBL:CU041276 Ensembl:ENSSSCT00000004810
Uniprot:F1RXY0
Length = 282
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 87/224 (38%), Positives = 136/224 (60%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLL--VFYIKKI---YS 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ + K Y+
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVSKTRFSYA 123
Query: 160 DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDT 219
++ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+NDT
Sbjct: 124 FPRFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVNDT 182
Query: 220 YKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
Y+ DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 183 YRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 226
>MGI|MGI:1858199 [details] [associations]
symbol:Ccnc "cyclin C" species:10090 "Mus musculus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016591 "DNA-directed RNA
polymerase II, holoenzyme" evidence=IEA] [GO:0016592 "mediator
complex" evidence=IDA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
MGI:MGI:1858199 GO:GO:0000079 GO:GO:0006355 GO:GO:0006351
Reactome:REACT_127416 EMBL:CH466538 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 Reactome:REACT_27166 PROSITE:PS00292
eggNOG:COG5333 HOGENOM:HOG000008007 KO:K15161 PANTHER:PTHR10026
CTD:892 GeneTree:ENSGT00690000101911 HOVERGEN:HBG050836 OMA:FFANVIQ
GO:GO:0016592 EMBL:U62638 EMBL:U49050 EMBL:AL772187 EMBL:BC003344
EMBL:BC120649 EMBL:BC120677 EMBL:AJ243075 EMBL:AJ243076
IPI:IPI00126002 IPI:IPI00880396 RefSeq:NP_058026.2
UniGene:Mm.278584 ProteinModelPortal:Q62447 STRING:Q62447
PhosphoSite:Q62447 PRIDE:Q62447 Ensembl:ENSMUST00000102997
GeneID:51813 KEGG:mmu:51813 InParanoid:Q62447 NextBio:308072
CleanEx:MM_CCNC Genevestigator:Q62447 GermOnline:ENSMUSG00000028252
Uniprot:Q62447
Length = 283
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 87/225 (38%), Positives = 137/225 (60%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLLVF---YIKKIYS-- 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ +K +S
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAATTSVLKTRFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+ND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDV-LLPLAWRIVND 182
Query: 219 TYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
TY+ DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 227
>UNIPROTKB|F1LNZ0 [details] [associations]
symbol:Ccnc "Cyclin-C" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 OMA:FFANVIQ GO:GO:0016592
IPI:IPI00190351 Ensembl:ENSRNOT00000043469 ArrayExpress:F1LNZ0
Uniprot:F1LNZ0
Length = 333
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 87/225 (38%), Positives = 137/225 (60%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 54 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 113
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLLVF---YIKKIYS-- 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ +K +S
Sbjct: 114 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAATTSVLKTRFSYA 173
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+ND
Sbjct: 174 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDV-LLPLAWRIVND 232
Query: 219 TYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
TY+ DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 233 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 277
>UNIPROTKB|P55168 [details] [associations]
symbol:CCNC "Cyclin-C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
KO:K15161 PANTHER:PTHR10026 CTD:892 GeneTree:ENSGT00690000101911
HOVERGEN:HBG050836 OMA:FFANVIQ OrthoDB:EOG4G1MGX GO:GO:0016592
EMBL:U40873 IPI:IPI00954739 RefSeq:NP_001161237.1 UniGene:Gga.9076
ProteinModelPortal:P55168 STRING:P55168 Ensembl:ENSGALT00000024947
GeneID:421791 KEGG:gga:421791 InParanoid:P55168 NextBio:20824510
ArrayExpress:P55168 Uniprot:P55168
Length = 283
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/225 (38%), Positives = 137/225 (60%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLL---VFYIKKIYS-- 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ +K +S
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+ND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 219 TYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
TY+ DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 227
>UNIPROTKB|Q3ZCK5 [details] [associations]
symbol:CCNC "Cyclin-C" species:9913 "Bos taurus"
[GO:0016592 "mediator complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
KO:K15161 PANTHER:PTHR10026 EMBL:BC102107 IPI:IPI00709203
RefSeq:NP_001029530.1 UniGene:Bt.16282 HSSP:O94503
ProteinModelPortal:Q3ZCK5 STRING:Q3ZCK5 PRIDE:Q3ZCK5
Ensembl:ENSBTAT00000037858 GeneID:509717 KEGG:bta:509717 CTD:892
GeneTree:ENSGT00690000101911 HOVERGEN:HBG050836 InParanoid:Q3ZCK5
OMA:FFANVIQ OrthoDB:EOG4G1MGX NextBio:20869092 GO:GO:0016592
Uniprot:Q3ZCK5
Length = 283
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 86/225 (38%), Positives = 138/225 (61%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLLVF---YIKKIYS-- 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ +K +S
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ Y++ +LE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+ND
Sbjct: 124 FPKEFPYKMNHVLECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 219 TYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
TY+ DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 227
>UNIPROTKB|E5RFK5 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
IPI:IPI00979643 SMR:E5RFK5 Ensembl:ENST00000518714
Ensembl:ENST00000520371 Uniprot:E5RFK5
Length = 282
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/225 (38%), Positives = 137/225 (60%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLLVF---YIKKIYS-- 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ +K +S
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+ND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 219 TYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
TY+ DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 227
>UNIPROTKB|P24863 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0000079
GO:GO:0005654 GO:GO:0045944 GO:GO:0007219 GO:GO:0007179
GO:GO:0006367 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
KO:K15161 PANTHER:PTHR10026 CTD:892 HOVERGEN:HBG050836 OMA:FFANVIQ
OrthoDB:EOG4G1MGX GO:GO:0016592 EMBL:M74091 EMBL:U40739 EMBL:U40728
EMBL:U40729 EMBL:U40730 EMBL:U40731 EMBL:U40732 EMBL:U40733
EMBL:U40734 EMBL:U40735 EMBL:U40736 EMBL:U40737 EMBL:U40738
EMBL:AK298558 EMBL:AL137784 IPI:IPI00031076 IPI:IPI00554688
PIR:A40268 RefSeq:NP_001013417.1 RefSeq:NP_005181.2
UniGene:Hs.430646 UniGene:Hs.633351 PDB:3RGF PDBsum:3RGF
ProteinModelPortal:P24863 SMR:P24863 DIP:DIP-32920N IntAct:P24863
STRING:P24863 PhosphoSite:P24863 DMDM:166214910 PRIDE:P24863
DNASU:892 Ensembl:ENST00000520429 Ensembl:ENST00000523799
Ensembl:ENST00000523985 GeneID:892 KEGG:hsa:892 UCSC:uc003pqd.3
GeneCards:GC06M100037 HGNC:HGNC:1581 HPA:CAB010499 MIM:123838
neXtProt:NX_P24863 PharmGKB:PA26149 InParanoid:P24863
GenomeRNAi:892 NextBio:3690 ArrayExpress:P24863 Bgee:P24863
CleanEx:HS_CCNC Genevestigator:P24863 GermOnline:ENSG00000112237
Uniprot:P24863
Length = 283
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 87/225 (38%), Positives = 137/225 (60%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLLVF---YIKKIYS-- 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ +K +S
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+ND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 219 TYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
TY+ DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 227
>ZFIN|ZDB-GENE-030131-7369 [details] [associations]
symbol:ccnc "cyclin C" species:7955 "Danio rerio"
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
ZFIN:ZDB-GENE-030131-7369 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
eggNOG:COG5333 HOGENOM:HOG000008007 KO:K15161 PANTHER:PTHR10026
CTD:892 HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX EMBL:BC060903
EMBL:AY398320 EMBL:AY450302 IPI:IPI00497140 RefSeq:NP_956245.1
UniGene:Dr.151536 STRING:Q6STL0 GeneID:335429 KEGG:dre:335429
InParanoid:Q6STL0 NextBio:20810840 Uniprot:Q6STL0
Length = 283
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 86/225 (38%), Positives = 137/225 (60%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++L+ E++ L +T + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWVLDKQDLMKERQKDLKFLTEEEYWKLQIFFANVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLL---VFYIKKIYS-- 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ +K +S
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ + + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+ND
Sbjct: 124 FPKEFPFRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 219 TYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
TY+ DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 227
>UNIPROTKB|Q91031 [details] [associations]
symbol:CCNC "Cyclin C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
HOGENOM:HOG000008007 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX GO:GO:0016592 UniGene:Gga.9076
EMBL:AADN02002249 EMBL:U40875 EMBL:U40876 EMBL:U40877 EMBL:U40886
EMBL:U40879 EMBL:U40880 EMBL:U40881 EMBL:U40882 EMBL:U40883
EMBL:U40884 EMBL:U40885 IPI:IPI00820099 STRING:Q91031
Ensembl:ENSGALT00000037233 InParanoid:Q91031 Uniprot:Q91031
Length = 272
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 84/210 (40%), Positives = 131/210 (62%)
Query: 66 RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVATAVTYMRRCYTRKSM 121
++LL E++ L ++ + + N L +H+K+RQ+V+ATA Y +R Y R S+
Sbjct: 8 QDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSL 67
Query: 122 TEYDPHLVAPTCLYLASKAEESTV--QARLL---VFYIKKIYS---DEKYRYEVKDILEM 173
DP L+APTC++LASK EE V RL+ +K +S +++ Y + ILE
Sbjct: 68 KSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPYRMNHILEC 127
Query: 174 EMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLI 233
E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +I
Sbjct: 128 EFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMI 186
Query: 234 ALACIYIASVYREKDNTAWFEELRVDMNVV 263
ALAC+++A V ++KD WF EL VDM +
Sbjct: 187 ALACLHVACVVQQKDARQWFAELSVDMEKI 216
>UNIPROTKB|F1PGM0 [details] [associations]
symbol:CCNC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 OMA:FFANVIQ EMBL:AAEX03008558
EMBL:AAEX03008559 Ensembl:ENSCAFT00000005668 Uniprot:F1PGM0
Length = 284
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 84/210 (40%), Positives = 131/210 (62%)
Query: 66 RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVATAVTYMRRCYTRKSM 121
++LL E++ L ++ + + N L +H+K+RQ+V+ATA Y +R Y R S+
Sbjct: 20 QDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSL 79
Query: 122 TEYDPHLVAPTCLYLASKAEESTV--QARLL---VFYIKKIYS---DEKYRYEVKDILEM 173
DP L+APTC++LASK EE V RL+ +K +S +++ Y + ILE
Sbjct: 80 KSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPYRMNHILEC 139
Query: 174 EMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLI 233
E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +I
Sbjct: 140 EFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMI 198
Query: 234 ALACIYIASVYREKDNTAWFEELRVDMNVV 263
ALAC+++A V ++KD WF EL VDM +
Sbjct: 199 ALACLHVACVVQQKDARQWFAELSVDMEKI 228
>UNIPROTKB|J3KP90 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
ProteinModelPortal:J3KP90 Ensembl:ENST00000369220 Uniprot:J3KP90
Length = 282
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 87/225 (38%), Positives = 137/225 (60%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLLVF---YIKKIYS-- 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ +K +S
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+ND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAW-IVND 181
Query: 219 TYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
TY+ DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 182 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 226
>UNIPROTKB|H0YBQ5 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
Ensembl:ENST00000486428 Bgee:H0YBQ5 Uniprot:H0YBQ5
Length = 228
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 77/174 (44%), Positives = 115/174 (66%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLLVF--- 152
+K+RQ+V+ATA Y +R Y R S+ DP L+APTC++LASK EE V RL+
Sbjct: 1 LKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATS 60
Query: 153 YIKKIYS---DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMT 209
+K +S +++ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ +
Sbjct: 61 VLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LL 119
Query: 210 HLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVV 263
L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM +
Sbjct: 120 PLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKI 173
>DICTYBASE|DDB_G0274139 [details] [associations]
symbol:cycC "putative C-type cyclin" species:44689
"Dictyostelium discoideum" [GO:0016591 "DNA-directed RNA polymerase
II, holoenzyme" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 dictyBase:DDB_G0274139 GO:GO:0005634
GO:GO:0000079 GO:GO:0006355 GenomeReviews:CM000151_GR GO:GO:0006351
EMBL:AAFI02000012 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 GO:GO:0016538 PROSITE:PS00292 eggNOG:COG5333
KO:K15161 PANTHER:PTHR10026 HSSP:O94503 OMA:FFANVIQ
RefSeq:XP_644320.1 ProteinModelPortal:Q86KE7
EnsemblProtists:DDB0231775 GeneID:8619748 KEGG:ddi:DDB_G0274139
ProtClustDB:CLSZ2729216 Uniprot:Q86KE7
Length = 255
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 71/178 (39%), Positives = 113/178 (63%)
Query: 83 LRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEE 142
LR + +NL +K+RQR ++TA+ Y +R Y + S + +P LVA TCLYL+SK EE
Sbjct: 40 LRTHYCFVIQNLGNALKLRQRAISTAIVYFKRFYLKNSFVDCEPRLVAVTCLYLSSKVEE 99
Query: 143 STVQARLLVFYIKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAG 202
QA+ +K+I D + Y + DILE E +LE L++ L+++HPY+SL +LQ +G
Sbjct: 100 CITQAKKCAAKMKEI--DHSFNYLMNDILECEFFVLEELDFCLIIYHPYKSLPFYLQSSG 157
Query: 203 MNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDM 260
++ ++ + WGI+ND+Y+ D+ L++PP ++ L CI + S +KD W EL V+M
Sbjct: 158 LDPASI-EIIWGIVNDSYRTDVCLLYPPFVVGLGCILLGSYLLKKDIKQWLSELNVEM 214
>UNIPROTKB|Q29AI1 [details] [associations]
symbol:CycC "Cyclin-C" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0016592 "mediator complex" evidence=ISS]
InterPro:IPR004367 InterPro:IPR015429 InterPro:IPR023598
Pfam:PF02984 PIRSF:PIRSF028758 GO:GO:0000079 EMBL:CM000070
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GenomeReviews:CM000070_GR GO:GO:0016591 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026 OMA:FFANVIQ
GO:GO:0016592 OrthoDB:EOG4GF1X0 GO:GO:0001104 RefSeq:XP_001358231.1
ProteinModelPortal:Q29AI1 GeneID:4801070 KEGG:dpo:Dpse_GA20234
FlyBase:FBgn0080229 InParanoid:Q29AI1 Uniprot:Q29AI1
Length = 267
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 88/226 (38%), Positives = 133/226 (58%)
Query: 56 SFW-TKKTWMW----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW + + W ++LL E++ LL + + + N L + +K+RQ+V+A
Sbjct: 4 NFWQSSHSQQWILDKQDLLRERQHDLLSLNEDEYQKVFIFFANVIQVLGEQLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLLVFY---IKKIYS-- 159
TA Y +R Y R S+ DP L+APTC+ LASK EE V +RL+ IK +S
Sbjct: 64 TATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ Y ILE E +LE L+ L+V+ PYR L+Q +QD G D +T LSW I+ND
Sbjct: 124 YTQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLT-LSWRIVND 182
Query: 219 TYKMDLILVHPPHLIALACIYIASVYREKDNTA-WFEELRVDMNVV 263
+ + D+ L++PP+ IA+AC+ IA V +KD+T WF EL VD++ V
Sbjct: 183 SLRTDVCLLYPPYQIAIACLQIACVILQKDSTKQWFAELNVDLDKV 228
>FB|FBgn0004597 [details] [associations]
symbol:CycC "Cyclin C" species:7227 "Drosophila melanogaster"
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=ISS;NAS;IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=NAS] [GO:0019908
"nuclear cyclin-dependent protein kinase holoenzyme complex"
evidence=NAS] [GO:0016592 "mediator complex" evidence=ISS;IPI]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISS] [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=ISS;IMP] [GO:0000079
"regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0036011 "imaginal disc-derived leg segmentation"
evidence=IMP] [GO:0022416 "chaeta development" evidence=IMP]
[GO:0045498 "sex comb development" evidence=IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] InterPro:IPR004367 InterPro:IPR015429
InterPro:IPR023598 Pfam:PF02984 PIRSF:PIRSF028758 EMBL:AE014297
GO:GO:0007095 GO:GO:0000079 GO:GO:0022416 GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0036011
GO:GO:0016591 GO:GO:0045498 GO:GO:0016538 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 OMA:FFANVIQ GO:GO:0016592 EMBL:X62948
EMBL:M74906 EMBL:AY061425 PIR:A40269 RefSeq:NP_476848.1
UniGene:Dm.20187 ProteinModelPortal:P25008 SMR:P25008
DIP:DIP-17706N IntAct:P25008 MINT:MINT-280784 STRING:P25008
PaxDb:P25008 PRIDE:P25008 EnsemblMetazoa:FBtr0083010 GeneID:41801
KEGG:dme:Dmel_CG7281 CTD:41801 FlyBase:FBgn0004597
InParanoid:P25008 OrthoDB:EOG4GF1X0 PhylomeDB:P25008
GenomeRNAi:41801 NextBio:825634 Bgee:P25008 GermOnline:CG7281
GO:GO:0001104 Uniprot:P25008
Length = 267
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 88/226 (38%), Positives = 131/226 (57%)
Query: 56 SFW-TKKTWMW----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW + + W +LL E++ LL + + + N L + +K+RQ+V+A
Sbjct: 4 NFWQSSHSQQWILDKPDLLRERQHDLLALNEDEYQKVFIFFANVIQVLGEQLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLLVFY---IKKIYS-- 159
TA Y +R Y R S+ DP L+APTC+ LASK EE V +RL+ IK +S
Sbjct: 64 TATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ Y ILE E +LE L+ L+V+ PYR L+Q +QD G D +T LSW I+ND
Sbjct: 124 YAQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLT-LSWRIVND 182
Query: 219 TYKMDLILVHPPHLIALACIYIASVYREKDNTA-WFEELRVDMNVV 263
+ + D+ L++PP+ IA+AC+ IA V +KD T WF EL VD++ V
Sbjct: 183 SLRTDVCLLYPPYQIAIACLQIACVILQKDATKQWFAELNVDLDKV 228
>UNIPROTKB|G5E954 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 EMBL:CH471051 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784
UniGene:Hs.430646 UniGene:Hs.633351 HGNC:HGNC:1581
ProteinModelPortal:G5E954 SMR:G5E954 Ensembl:ENST00000326298
ArrayExpress:G5E954 Bgee:G5E954 Uniprot:G5E954
Length = 202
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 74/197 (37%), Positives = 118/197 (59%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLLVF---YIKKIYS-- 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ +K +S
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILND 218
+++ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G D+ + L+W I+ND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 219 TYKMDLILVHPPHLIAL 235
TY+ DL L++PP +IAL
Sbjct: 183 TYRTDLCLLYPPFMIAL 199
>UNIPROTKB|E5RFX8 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR015429 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GO:GO:0016592 EMBL:AL137784
HGNC:HGNC:1581 IPI:IPI00977088 ProteinModelPortal:E5RFX8 SMR:E5RFX8
Ensembl:ENST00000524049 ArrayExpress:E5RFX8 Bgee:E5RFX8
Uniprot:E5RFX8
Length = 162
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 62/143 (43%), Positives = 94/143 (65%)
Query: 129 VAPTCLYLASKAEESTV--QARLLVF---YIKKIYS---DEKYRYEVKDILEMEMKILEA 180
+APTC++LASK EE V RL+ +K +S +++ Y + ILE E +LE
Sbjct: 1 MAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYRMNHILECEFYLLEL 60
Query: 181 LNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYI 240
++ L+V+HPYR L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++
Sbjct: 61 MDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHV 119
Query: 241 ASVYREKDNTAWFEELRVDMNVV 263
A V ++KD WF EL VDM +
Sbjct: 120 ACVVQQKDARQWFAELSVDMEKI 142
>ASPGD|ASPL0000048419 [details] [associations]
symbol:AN2172 species:162425 "Emericella nidulans"
[GO:0016592 "mediator complex" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0010673 "positive regulation of transcription from RNA
polymerase II promoter during meiosis" evidence=IEA] [GO:0000411
"positive regulation of transcription by galactose" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
EMBL:BN001307 GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 KO:K15161
PANTHER:PTHR10026 HSSP:O94503 EMBL:AACD01000034 OrthoDB:EOG4BZRBH
RefSeq:XP_659776.1 ProteinModelPortal:Q5BBA8 STRING:Q5BBA8
GeneID:2875644 KEGG:ani:AN2172.2 HOGENOM:HOG000217621
Uniprot:Q5BBA8
Length = 302
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 63/213 (29%), Positives = 106/213 (49%)
Query: 56 SFWT---KKTWMW-RNLLTEKRASLLKITSSLRCRCP-------TIYRN-----LAQHVK 99
++W +K W++ R L E R S + + P IY N L + +
Sbjct: 4 NYWASTQRKHWLFTRERLAEIRESFKEKDKASHTHFPLPDQRLLNIYFNQQLIKLGKRMS 63
Query: 100 VRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS 159
RQ+ +ATA Y++R YT+ + +P+LV T YLA K EE R +V + ++
Sbjct: 64 TRQQALATAQVYIKRYYTKNEIRNTNPYLVLTTAFYLACKMEECPQHIRFVVSEARALWP 123
Query: 160 DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDT 219
E +V + E E ++ + L+V HPYR+L + + + + L+W ++ND
Sbjct: 124 -EFIVPDVSKVGECEFSLISEMQAQLIVHHPYRTLSELQPELSLTSDEVA-LAWSVINDH 181
Query: 220 YKMDLILVHPPHLIALACIYIASVYREKDNTAW 252
Y DL L++PPH+IA+ I +A V++ TA+
Sbjct: 182 YLTDLSLLYPPHIIAVMAIIVAVVFKPSSQTAF 214
>SGD|S000004970 [details] [associations]
symbol:SSN8 "Cyclin-like component of the RNA polymerase II
holoenzyme" species:4932 "Saccharomyces cerevisiae" [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IDA]
[GO:0010673 "positive regulation of transcription from RNA
polymerase II promoter during meiosis" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=ISS;IMP;IPI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000411 "positive regulation of transcription by galactose"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
SGD:S000004970 GO:GO:0000079 EMBL:BK006947 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 GO:GO:0010673 GO:GO:0016538 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 GO:GO:0016592 GO:GO:0000411
EMBL:Z71301 OrthoDB:EOG4BZRBH HOGENOM:HOG000217621 EMBL:U20221
EMBL:U16248 EMBL:U20635 PIR:S59373 RefSeq:NP_014373.3
RefSeq:NP_014379.3 ProteinModelPortal:P47821 SMR:P47821
DIP:DIP-2007N IntAct:P47821 MINT:MINT-385997 STRING:P47821
EnsemblFungi:YNL025C GeneID:855706 GeneID:855712 KEGG:sce:YNL019C
KEGG:sce:YNL025C CYGD:YNL025c OMA:KVEECPQ NextBio:980046
Genevestigator:P47821 GermOnline:YNL025C Uniprot:P47821
Length = 323
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/165 (33%), Positives = 90/165 (54%)
Query: 82 SLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAE 141
+LR C + L + + +RQ +ATA Y+ R + S+ E + +++ TC+YLA K E
Sbjct: 73 NLRIYCYFLIMKLGRRLNIRQYALATAHIYLSRFLIKASVREINLYMLVTTCVYLACKVE 132
Query: 142 ESTVQARLLVFYIKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDA 201
E R LV + ++ E + + E E +LE L YL+V HPY+SL Q +Q
Sbjct: 133 ECPQYIRTLVSEARTLWP-EFIPPDPTKVTEFEFYLLEELESYLIVHHPYQSLKQIVQVL 191
Query: 202 GMNDINMTHLS------WGILNDTYKMDLILVHPPHLIALACIYI 240
+T S W ++ND+Y D+ L++PPH+IA+AC++I
Sbjct: 192 KQPPFQITLSSDDLQNCWSLINDSYINDVHLLYPPHIIAVACLFI 236
>UNIPROTKB|F1NTI7 [details] [associations]
symbol:CCNC "Cyclin-C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
EMBL:AADN02002249 IPI:IPI00600334 Ensembl:ENSGALT00000037234
ArrayExpress:F1NTI7 Uniprot:F1NTI7
Length = 177
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 58/164 (35%), Positives = 94/164 (57%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTV--QARLL---VFYIKKIYS-- 159
TA Y +R Y R S+ DP L+APTC++LASK EE V RL+ +K +S
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYA 123
Query: 160 -DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAG 202
+++ Y + ILE E +LE ++ L+V+HPYR L+Q++QD G
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMG 167
>UNIPROTKB|A4RD79 [details] [associations]
symbol:SSN8 "RNA polymerase II holoenzyme cyclin-like
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 EMBL:CM001235
GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 KO:K15161
PANTHER:PTHR10026 OrthoDB:EOG4BZRBH RefSeq:XP_003717868.1
ProteinModelPortal:A4RD79 STRING:A4RD79 EnsemblFungi:MGG_01071T0
GeneID:2674146 KEGG:mgr:MGG_01071 Uniprot:A4RD79
Length = 363
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 58/153 (37%), Positives = 88/153 (57%)
Query: 94 LAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFY 153
LA+++ +RQ+ +ATA YM+R YTR + +P LV T +YLA K EE + R +
Sbjct: 58 LAKNLSIRQQAIATAQVYMKRFYTRVEIRSTNPTLVLVTAVYLACKMEEMPLHIRNVSLE 117
Query: 154 IKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGM-NDINMTHLS 212
KK++ E E+ I E E ++ ++ L+V PYR+L QD + ND ++ +S
Sbjct: 118 AKKVWPMETPSLEIAKIGECEFWLISEMSAQLIVHQPYRTLTALQQDFQLANDDHVLAVS 177
Query: 213 WGILNDTYKMDLILVHPPHLIALACIYIASVYR 245
+ LND + DL L++ PH IALA I +A V R
Sbjct: 178 F--LNDHFMTDLPLLYAPHTIALAAIMLALVLR 208
>CGD|CAL0004675 [details] [associations]
symbol:SSN8 species:5476 "Candida albicans" [GO:0031505
"fungal-type cell wall organization" evidence=IMP] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0010673
"positive regulation of transcription from RNA polymerase II
promoter during meiosis" evidence=IEA] [GO:0000411 "positive
regulation of transcription by galactose" evidence=IEA]
InterPro:IPR015429 CGD:CAL0004675 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 GO:GO:0006351 GO:GO:0031505 EMBL:AACQ01000066
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026 HSSP:O94503
RefSeq:XP_716596.1 ProteinModelPortal:Q5A4H9 STRING:Q5A4H9
GeneID:3641718 KEGG:cal:CaO19.7355 Uniprot:Q5A4H9
Length = 434
Score = 241 (89.9 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 55/161 (34%), Positives = 92/161 (57%)
Query: 94 LAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFY 153
L + + +RQ +ATA Y+ R TR S+ E + +L+ TC+Y+A K EE RL++
Sbjct: 64 LGRRLNIRQIALATAEIYLTRFLTRVSLKEINVYLLITTCIYVACKIEECPQHIRLILSE 123
Query: 154 IKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMN------DIN 207
+ I+ E ++V + E E ++E ++ YL++ HPY+SL+Q + N +
Sbjct: 124 ARNIWP-EYIPHDVTKLAEFEFYLIEEMDSYLLLHHPYKSLMQINEFLSNNYNVFGFKLT 182
Query: 208 MTHL--SWGILNDTYKMDLILVHPPHLIALACIYIASVYRE 246
+ L +W ++ND+Y DL L+ PPH IA+A IYI V ++
Sbjct: 183 VEELQNAWSLINDSYITDLHLLLPPHTIAVAAIYITVVLKK 223
>UNIPROTKB|Q5A4H9 [details] [associations]
symbol:SSN8 "RNA polymerase II holoenzyme cyclin-like
subunit" species:237561 "Candida albicans SC5314" [GO:0031505
"fungal-type cell wall organization" evidence=IMP]
InterPro:IPR015429 CGD:CAL0004675 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 GO:GO:0006351 GO:GO:0031505 EMBL:AACQ01000066
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026 HSSP:O94503
RefSeq:XP_716596.1 ProteinModelPortal:Q5A4H9 STRING:Q5A4H9
GeneID:3641718 KEGG:cal:CaO19.7355 Uniprot:Q5A4H9
Length = 434
Score = 241 (89.9 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 55/161 (34%), Positives = 92/161 (57%)
Query: 94 LAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFY 153
L + + +RQ +ATA Y+ R TR S+ E + +L+ TC+Y+A K EE RL++
Sbjct: 64 LGRRLNIRQIALATAEIYLTRFLTRVSLKEINVYLLITTCIYVACKIEECPQHIRLILSE 123
Query: 154 IKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMN------DIN 207
+ I+ E ++V + E E ++E ++ YL++ HPY+SL+Q + N +
Sbjct: 124 ARNIWP-EYIPHDVTKLAEFEFYLIEEMDSYLLLHHPYKSLMQINEFLSNNYNVFGFKLT 182
Query: 208 MTHL--SWGILNDTYKMDLILVHPPHLIALACIYIASVYRE 246
+ L +W ++ND+Y DL L+ PPH IA+A IYI V ++
Sbjct: 183 VEELQNAWSLINDSYITDLHLLLPPHTIAVAAIYITVVLKK 223
>POMBASE|SPBC12D12.06 [details] [associations]
symbol:srb11 "cyclin CycC, Srb mediator subunit Srb11"
species:4896 "Schizosaccharomyces pombe" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IC] [GO:0016591 "DNA-directed RNA
polymerase II, holoenzyme" evidence=IEA] [GO:0016592 "mediator
complex" evidence=IDA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 PomBase:SPBC12D12.06 GO:GO:0000079 EMBL:CU329671
GO:GO:0006357 GO:GO:0006351 GenomeReviews:CU329671_GR
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026
GO:GO:0016592 PIR:T39386 RefSeq:NP_595953.1 PDB:1ZP2 PDBsum:1ZP2
ProteinModelPortal:O94503 SMR:O94503 STRING:O94503
EnsemblFungi:SPBC12D12.06.1 GeneID:2539651 KEGG:spo:SPBC12D12.06
OrthoDB:EOG4BZRBH EvolutionaryTrace:O94503 NextBio:20800805
Uniprot:O94503
Length = 228
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 48/153 (31%), Positives = 83/153 (54%)
Query: 90 IYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTE-YDPHLVAPTCLYLASKAEESTVQAR 148
+ + +++RQRV+ATA+ +RR +K+ + + + TC+YL+ K EE V R
Sbjct: 38 VVQTFGDRLRLRQRVLATAIVLLRRYMLKKNEEKGFSLEALVATCIYLSCKVEECPVHIR 97
Query: 149 LLVFYIKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINM 208
+ ++S K + +I E+E +I+ L+ +L+V HPY SL Q D +N +
Sbjct: 98 TICNEANDLWS-LKVKLSRSNISEIEFEIISVLDAFLIVHHPYTSLEQAFHDGIINQKQL 156
Query: 209 THLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
+W I+ND+Y L L+ PH +A A + I+
Sbjct: 157 -EFAWSIVNDSYASSLCLMAHPHQLAYAALLIS 188
>TAIR|locus:2122940 [details] [associations]
symbol:CYCT1;2 species:3702 "Arabidopsis thaliana"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR015429
GO:GO:0000079 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 EMBL:AL161551 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
HOGENOM:HOG000220828 KO:K15188 EMBL:AL021768 EMBL:AK221363
EMBL:AK221364 IPI:IPI00530189 PIR:T06149 RefSeq:NP_193691.2
UniGene:At.54410 ProteinModelPortal:Q56YF8 SMR:Q56YF8 PRIDE:Q56YF8
EnsemblPlants:AT4G19560.1 GeneID:827698 KEGG:ath:AT4G19560
GeneFarm:4112 TAIR:At4g19560 InParanoid:Q56YF8 OMA:DMASTEK
Genevestigator:Q56YF8 Uniprot:Q56YF8
Length = 460
Score = 194 (73.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 57/208 (27%), Positives = 99/208 (47%)
Query: 66 RNLLTEKRASLLKITSSLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYD 125
RN + + LK + LR T L + +KV Q +ATA+ + R + R+S + D
Sbjct: 40 RNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFFLRQSHAKND 99
Query: 126 PHLVAPTCLYLASKAEESTVQAR-LLVFYIKKIYSDE---KYRYEVKD-----ILEMEMK 176
+A C+ LA K EE+ V +++ ++I+ + R EV D +L E
Sbjct: 100 RQTIATVCMLLAGKVEETPVTLEDVIIASYERIHKKDLAGAQRKEVYDQQKELVLIGEEL 159
Query: 177 ILEALNYYLVVFHPYRSLVQFLQDAGMNDIN--MTHLSWGILNDTYKMDLILVHPPHLIA 234
+L LN+ L + HPY+ LV+ ++ + D + +W +ND + L L + PH IA
Sbjct: 160 VLSTLNFDLCISHPYKPLVEAIKKYMVEDAKTQLAQFAWNFVNDCLRTTLCLQYQPHHIA 219
Query: 235 LACIYIASVYREKDNTAWFEELRVDMNV 262
I +A+ D ++ E L + ++
Sbjct: 220 AGAILLAAELPTVDLQSYREVLCQEFDI 247
>TAIR|locus:2122975 [details] [associations]
symbol:CYCT1;4 species:3702 "Arabidopsis thaliana"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0009615 "response to
virus" evidence=IEP] [GO:0010090 "trichome morphogenesis"
evidence=IMP] [GO:0048366 "leaf development" evidence=IGI]
[GO:0000394 "RNA splicing, via endonucleolytic cleavage and
ligation" evidence=RCA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=RCA] [GO:0008284 "positive
regulation of cell proliferation" evidence=RCA] InterPro:IPR004367
InterPro:IPR015429 Pfam:PF02984 GO:GO:0005634 GO:GO:0000079
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0010090 GO:GO:0051301
GO:GO:0006355 GO:GO:0009615 GO:GO:0007049 GO:GO:0048366
EMBL:AL161551 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
HOGENOM:HOG000220828 KO:K15188 EMBL:AL021768 EMBL:AK117509
EMBL:BT029301 IPI:IPI00546432 PIR:T06153 RefSeq:NP_193695.2
UniGene:At.32800 ProteinModelPortal:Q8GYM6 SMR:Q8GYM6 STRING:Q8GYM6
PRIDE:Q8GYM6 EnsemblPlants:AT4G19600.1 GeneID:827702
KEGG:ath:AT4G19600 GeneFarm:4117 TAIR:At4g19600 InParanoid:Q8GYM6
OMA:IRQSHAR PhylomeDB:Q8GYM6 ProtClustDB:CLSN2679942
Genevestigator:Q8GYM6 Uniprot:Q8GYM6
Length = 541
Score = 192 (72.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 55/199 (27%), Positives = 94/199 (47%)
Query: 77 LKITSSLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYL 136
LK + LR T ++L +KV Q +ATA+ + R + R+S D +A C++L
Sbjct: 53 LKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFL 112
Query: 137 ASKAEESTVQAR--LLVFY----------IKKIYSDEKYRYEVKDILEMEMKILEALNYY 184
A K EE+ + ++V Y +KI E Y + + IL E +L L +
Sbjct: 113 AGKVEETPRPLKDVIVVSYEIIHKKDPTTAQKIKQKEVYEQQKELILNGEKIVLSTLGFD 172
Query: 185 LVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVY 244
V+HPY+ LV+ ++ + + ++W +ND + L L PH IA I++A+ +
Sbjct: 173 FNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKF 232
Query: 245 RE----KDNT-AWFEELRV 258
+ D W++E V
Sbjct: 233 LKVKLPSDGEKVWWQEFDV 251
>POMBASE|SPBC32F12.06 [details] [associations]
symbol:pch1 "P-TEFB associated cyclin, cyclin T Pch1"
species:4896 "Schizosaccharomyces pombe" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006370 "7-methylguanosine mRNA capping"
evidence=TAS] [GO:0008024 "positive transcription elongation factor
complex b" evidence=TAS] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=NAS]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:1901407
"regulation of phosphorylation of RNA polymerase II C-terminal
domain" evidence=IDA] InterPro:IPR004367 InterPro:IPR015429
Pfam:PF02984 PomBase:SPBC32F12.06 GO:GO:0005829 GO:GO:0000079
GO:GO:0051301 GO:GO:0006355 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0007049 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016538 eggNOG:COG5333 PANTHER:PTHR10026 GO:GO:0006370
GO:GO:0008024 EMBL:U92879 PIR:T40230 RefSeq:NP_596149.1
ProteinModelPortal:O74627 IntAct:O74627 MINT:MINT-253426
STRING:O74627 EnsemblFungi:SPBC32F12.06.1 GeneID:2540237
KEGG:spo:SPBC32F12.06 OMA:ATANIYF OrthoDB:EOG4WWVTW
NextBio:20801368 GO:GO:1901407 Uniprot:O74627
Length = 342
Score = 188 (71.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 51/159 (32%), Positives = 83/159 (52%)
Query: 93 NLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVF 152
N+ +K+ Q +ATA Y R Y R S+ Y + VA TC++LA+K E+S + R +V
Sbjct: 53 NVGLRLKLPQTALATANIYFHRFYLRFSLKNYHYYEVAATCIFLATKVEDSVRKLRDIVI 112
Query: 153 YIKKIYS-------DEKYR--YEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAG 202
K+ DE+ + + +D IL E +LEAL + V HPY ++ F++
Sbjct: 113 NCAKVAQKNSNVLVDEQTKEYWRWRDVILYTEEVLLEALCFDFTVEHPYPYVLSFIKKFV 172
Query: 203 MNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
+D N+T ++W +ND+ + L++ P IA A A
Sbjct: 173 ADDKNVTKVAWTYINDSTRSIACLLYSPKTIAAAAFQFA 211
>UNIPROTKB|J9NXY6 [details] [associations]
symbol:CCNC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 EMBL:AAEX03008558 EMBL:AAEX03008559
Ensembl:ENSCAFT00000047644 Uniprot:J9NXY6
Length = 148
Score = 169 (64.5 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 44/128 (34%), Positives = 71/128 (55%)
Query: 66 RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVATAVTYMRRCYTRKSM 121
++LL E++ L ++ + + N L +H+K+RQ+V+ATA Y +R Y R S+
Sbjct: 14 QDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSL 73
Query: 122 TEYDPHLVAPTCLYLASKAEESTV--QARLL---VFYIKKIYS---DEKYRYEVKDILEM 173
DP L+APTC++LASK EE V RL+ +K +S +++ Y + ILE
Sbjct: 74 KSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPYRMNHILEC 133
Query: 174 EMKILEAL 181
E +LE +
Sbjct: 134 EFYLLELM 141
>UNIPROTKB|E5RI39 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
IPI:IPI00974477 ProteinModelPortal:E5RI39 SMR:E5RI39
Ensembl:ENST00000369217 ArrayExpress:E5RI39 Bgee:E5RI39
Uniprot:E5RI39
Length = 192
Score = 168 (64.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 44/126 (34%), Positives = 70/126 (55%)
Query: 66 RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVATAVTYMRRCYTRKSM 121
++LL E++ L ++ + + N L +H+K+RQ+V+ATA Y +R Y R S+
Sbjct: 66 QDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSL 125
Query: 122 TEYDPHLVAPTCLYLASKAEESTV--QARLLVF---YIKKIYS---DEKYRYEVKDILEM 173
DP L+APTC++LASK EE V RL+ +K +S +++ Y + ILE
Sbjct: 126 KSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYRMNHILEC 185
Query: 174 EMKILE 179
E +LE
Sbjct: 186 EFYLLE 191
>FB|FBgn0022936 [details] [associations]
symbol:CycH "Cyclin H" species:7227 "Drosophila melanogaster"
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0005675 "holo TFIIH complex" evidence=ISS;IDA] [GO:0008353 "RNA
polymerase II carboxy-terminal domain kinase activity"
evidence=IDA] [GO:0004693 "cyclin-dependent protein
serine/threonine kinase activity" evidence=IDA] [GO:0032806
"carboxy-terminal domain protein kinase complex" evidence=IDA]
[GO:0070985 "TFIIK complex" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 GO:GO:0007049 GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
HSSP:P51946 GO:GO:0005675 PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569
GO:GO:0032806 EMBL:AF024618 ProteinModelPortal:O17144 IntAct:O17144
STRING:O17144 PRIDE:O17144 FlyBase:FBgn0022936 InParanoid:O17144
OrthoDB:EOG4VDNF8 ArrayExpress:O17144 Bgee:O17144 Uniprot:O17144
Length = 325
Score = 177 (67.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 50/152 (32%), Positives = 75/152 (49%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKY 163
VV TA Y +R Y S +Y P + TC+++A K EE V V IK D
Sbjct: 80 VVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFVNNIK---GDRNK 136
Query: 164 RYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQD----AGMN--DINMTHLSWGILN 217
++ +L E+ ++ LNYYL + +P+R + FL D + M D H+ ++
Sbjct: 137 ATDI--VLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRLRPHID-SFID 193
Query: 218 DTYKMDLILVHPPHLIALACIYIASVYREKDN 249
TY D L+H P IALA + A+ RE++N
Sbjct: 194 STYYSDACLLHTPSQIALAAVLHAAS-REQEN 224
>UNIPROTKB|Q5JV82 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 EMBL:AL137784 UniGene:Hs.430646
UniGene:Hs.633351 HGNC:HGNC:1581 IPI:IPI00552945 SMR:Q5JV82
STRING:Q5JV82 Ensembl:ENST00000482541 UCSC:uc003pqf.3
HOVERGEN:HBG056332 Uniprot:Q5JV82
Length = 143
Score = 161 (61.7 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 41/126 (32%), Positives = 67/126 (53%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEE-STVQARLLVFYIKKIYSDEKYRY 165
TA Y +R Y R S+ DP L+APTC++LASK EE V L+ + +KY
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVCKCKKYIC 123
Query: 166 EVKDIL 171
KD++
Sbjct: 124 -FKDVI 128
>UNIPROTKB|Q90695 [details] [associations]
symbol:CCNC "Cyclin C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SUPFAM:SSF47954
PANTHER:PTHR10026 HSSP:P51946 GeneTree:ENSGT00690000101911
EMBL:AADN02002249 EMBL:U40874 IPI:IPI00574105 STRING:Q90695
Ensembl:ENSGALT00000031692 HOGENOM:HOG000151057 Uniprot:Q90695
Length = 105
Score = 160 (61.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 35/98 (35%), Positives = 57/98 (58%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEEST 144
TA Y +R Y R S+ DP L+APTC++LASK E+ T
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEDKT 101
>UNIPROTKB|E5RIH8 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR015429 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GO:GO:0016592 EMBL:AL137784 HGNC:HGNC:1581
IPI:IPI00979024 ProteinModelPortal:E5RIH8 SMR:E5RIH8
Ensembl:ENST00000484049 ArrayExpress:E5RIH8 Bgee:E5RIH8
Uniprot:E5RIH8
Length = 114
Score = 158 (60.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 35/96 (36%), Positives = 56/96 (58%)
Query: 56 SFWTKKTWM-W----RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVA 106
+FW ++ W ++LL E++ L ++ + + N L +H+K+RQ+V+A
Sbjct: 4 NFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIA 63
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEE 142
TA Y +R Y R S+ DP L+APTC++LASK EE
Sbjct: 64 TATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEE 99
>TAIR|locus:2008698 [details] [associations]
symbol:CYCT1;1 "cyclin T1;1" species:3702 "Arabidopsis
thaliana" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR015429
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000079 GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
EMBL:AC023064 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
HOGENOM:HOG000220828 KO:K15188 IPI:IPI00532594 PIR:E86475
RefSeq:NP_174775.1 UniGene:At.65959 ProteinModelPortal:Q9C8P7
SMR:Q9C8P7 EnsemblPlants:AT1G35440.1 GeneID:840436
KEGG:ath:AT1G35440 GeneFarm:4111 TAIR:At1g35440 InParanoid:Q9C8P7
OMA:WNFANDS PhylomeDB:Q9C8P7 ProtClustDB:CLSN2914362
Genevestigator:Q9C8P7 Uniprot:Q9C8P7
Length = 247
Score = 166 (63.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 49/171 (28%), Positives = 88/171 (51%)
Query: 77 LKITSSLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYL 136
LK + R + + L Q + Q+ +ATA+ +R +TR+S+T+ DP VA C+++
Sbjct: 27 LKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTRQSLTKNDPKTVAIICMFI 86
Query: 137 ASKAEESTVQARLLVFYIKKI-YSDEKYR--YE-VK-DILEMEMKILEALNYYLVVFHPY 191
A K E S A +VF ++ ++ E R +E +K +L E +L L L + HPY
Sbjct: 87 AGKVEGSPRPAGDVVFVSYRVLFNKEPLRDVFERLKMTVLTGEKLVLSTLECDLEIEHPY 146
Query: 192 RSLVQFLQDAGMNDIN--MTHLSWGILNDTYKMDLILVHPPHLIALACIYI 240
+ ++ +++ + + + ++ +ND+ + L L P IA A IYI
Sbjct: 147 KLVMDWVKRSVKTEDGRRLCQAAFNFVNDSLRTSLCLQFGPSQIASAAIYI 197
>ZFIN|ZDB-GENE-030131-5126 [details] [associations]
symbol:ccnk "cyclin K" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR015429
ZFIN:ZDB-GENE-030131-5126 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
HOVERGEN:HBG050836 HOGENOM:HOG000220828
GeneTree:ENSGT00690000102036 EMBL:BX649499 OMA:MSTTNSY
EMBL:CU104739 IPI:IPI00618709 UniGene:Dr.80329
Ensembl:ENSDART00000142518 InParanoid:Q5RGW5 Uniprot:Q5RGW5
Length = 526
Score = 175 (66.7 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 50/211 (23%), Positives = 101/211 (47%)
Query: 53 TTNSFWTKKTWMW--RNLL-TEKRASLLKITSS-LRCRCPTIYRNLAQHVKVRQRVVATA 108
TTN TK W W ++L T ++ L T + R ++ + + +AT
Sbjct: 16 TTNLDHTKPCWYWDKKDLAHTPSQSDLDPATEARYRREGARFIFDVGTRLGLHYDTLATG 75
Query: 109 VTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY--- 165
+TY R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++
Sbjct: 76 ITYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFAQFGD 135
Query: 166 EVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYK 221
+ K+ ++ +E +L+ + + L V HPY+ L+++ + N + + ++W +ND+
Sbjct: 136 DPKEEVMVLERILLQTIKFDLQVEHPYQFLLRYAKQLKGDKNKVQKLVQMAWTFVNDSLC 195
Query: 222 MDLILVHPPHLIALACIYIASVYREKDNTAW 252
L L P +IA+A +Y+A + D W
Sbjct: 196 TMLSLQWEPEIIAVAVMYLAGRLCKFDIQEW 226
>UNIPROTKB|Q788V6 [details] [associations]
symbol:CCNC "Cyclin-C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 EMBL:AADN02002249
EMBL:U40878 EMBL:U40875 EMBL:U40876 EMBL:U40877 IPI:IPI00823364
STRING:Q788V6 Ensembl:ENSGALT00000037232 Uniprot:Q788V6
Length = 94
Score = 154 (59.3 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 32/83 (38%), Positives = 51/83 (61%)
Query: 66 RNLLTEKRASLLKITSSLRCRCPTIYRN----LAQHVKVRQRVVATAVTYMRRCYTRKSM 121
++LL E++ L ++ + + N L +H+K+RQ+V+ATA Y +R Y R S+
Sbjct: 8 QDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSL 67
Query: 122 TEYDPHLVAPTCLYLASKAEEST 144
DP L+APTC++LASK E+ T
Sbjct: 68 KSIDPVLMAPTCVFLASKVEDKT 90
>FB|FBgn0040394 [details] [associations]
symbol:CG16903 species:7227 "Drosophila melanogaster"
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR015429 InterPro:IPR015431
InterPro:IPR017060 PIRSF:PIRSF036580 GO:GO:0000079 GO:GO:0022008
GO:GO:0006355 GO:GO:0016740 EMBL:AE014298 GO:GO:0006396
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 PANTHER:PTHR10026:SF2
FlyBase:FBgn0040394 EMBL:AY058550 RefSeq:NP_569980.1
UniGene:Dm.4166 SMR:Q9W526 MINT:MINT-1591267
EnsemblMetazoa:FBtr0070434 GeneID:31178 KEGG:dme:Dmel_CG16903
UCSC:CG16903-RA InParanoid:Q9W526 OMA:PPWYSIF GenomeRNAi:31178
NextBio:772328 Uniprot:Q9W526
Length = 560
Score = 173 (66.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 49/179 (27%), Positives = 93/179 (51%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT +R + KS ++ VA +C+ LASK EE+ + R + VF+ I
Sbjct: 129 LRLPQVAMATGQVLFQRFFYSKSFVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHI 188
Query: 155 KKIYSDEK--------YRYEVK-DILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMND 205
K++ + ++ Y +K +++ E ++L+ L + + V HP++ +V +LQ
Sbjct: 189 KQVRAQKEISPMVLDPYYTNLKMQVIKAERRVLKELGFCVHVKHPHKLIVMYLQVLQYEK 248
Query: 206 IN-MTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYRE---KDNTAWFEELRVDM 260
+ LSW +ND+ + D+ + + P IA ACIY+++ ++ WF RV M
Sbjct: 249 HEKLMQLSWNFMNDSLRTDVFMRYTPEAIACACIYLSARKLNIPLPNSPPWFGIFRVPM 307
>TAIR|locus:2153358 [details] [associations]
symbol:AT5G45190 species:3702 "Arabidopsis thaliana"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0009615 "response to
virus" evidence=IEP] [GO:0009908 "flower development" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0048366
"leaf development" evidence=IGI] [GO:0050792 "regulation of viral
reproduction" evidence=IMP] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR004367
InterPro:IPR015429 Pfam:PF02984 GO:GO:0005634 EMBL:CP002688
GO:GO:0000079 GO:GO:0010090 GO:GO:0006355 GO:GO:0009615
GO:GO:0009908 GO:GO:0048366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0050792 PANTHER:PTHR10026 KO:K15188 IPI:IPI00938804
RefSeq:NP_001154763.1 UniGene:At.30028 ProteinModelPortal:F4KD43
SMR:F4KD43 PRIDE:F4KD43 EnsemblPlants:AT5G45190.2 GeneID:834555
KEGG:ath:AT5G45190 OMA:RHNSENG Uniprot:F4KD43
Length = 590
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 47/171 (27%), Positives = 83/171 (48%)
Query: 105 VATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVF--Y--------- 153
+ATA+ + R + R+S + D +A C++LA K EE+ + ++F Y
Sbjct: 92 IATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKDPG 151
Query: 154 -IKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLS 212
+KI E Y + + IL E +L L + L V+HPY+ LV+ ++ + + ++
Sbjct: 152 ASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQNALAQVA 211
Query: 213 WGILNDTYKMDLILVHPPHLIALACIYIASVYRE----KDNT-AWFEELRV 258
W +ND + L L PH IA I++A+ + + D W++E V
Sbjct: 212 WNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDV 262
>ZFIN|ZDB-GENE-050320-13 [details] [associations]
symbol:ccnh "cyclin H" species:7955 "Danio rerio"
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0070985 "TFIIK complex"
evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 ZFIN:ZDB-GENE-050320-13 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
TIGRFAMs:TIGR00569 CTD:902 HOVERGEN:HBG050840 EMBL:BC091559
EMBL:DQ294346 IPI:IPI00510205 RefSeq:NP_001013471.1
UniGene:Dr.95737 SMR:Q5BJA4 STRING:Q5BJA4 GeneID:541325
KEGG:dre:541325 InParanoid:Q5BJA4 NextBio:20879144 Uniprot:Q5BJA4
Length = 319
Score = 164 (62.8 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 38/97 (39%), Positives = 53/97 (54%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKY 163
VV TA Y RR Y S+ EY P + TC YL+ K +E V + V +++ S
Sbjct: 79 VVGTACMYFRRFYLNNSLMEYHPRTIMLTCAYLSCKVDEFNVSSTQFVGNLQE--SPAGQ 136
Query: 164 RYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQD 200
V ILE E+ +++ LN++LVV +PYR L FL D
Sbjct: 137 ERAVDQILEYELLLIQQLNFHLVVHNPYRPLEGFLID 173
>UNIPROTKB|A9XU13 [details] [associations]
symbol:CYCT1b "Cyclin-T1" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 HOVERGEN:HBG050836
UniGene:Hs.92308 HGNC:HGNC:1599 EMBL:AC079951 EMBL:EF688064
IPI:IPI00791037 SMR:A9XU13 STRING:A9XU13 Ensembl:ENST00000417344
HOGENOM:HOG000068113 Uniprot:A9XU13
Length = 184
Score = 146 (56.5 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 41/162 (25%), Positives = 76/162 (46%)
Query: 47 ISGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITSSLRCRCPTIYRNLAQHVKVRQRVVA 106
+ G R+ N W N + + S R + + +++ Q + V Q +
Sbjct: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLV------FYIKKIYSD 160
TA+ YM R Y +S T++ + VAP L+LA+K EE + ++ + ++ D
Sbjct: 61 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120
Query: 161 ---EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ 199
E Y +V+D++ +E IL+ L + L + HP+ +V+ Q
Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQ 162
>UNIPROTKB|D6RHI7 [details] [associations]
symbol:CCNH "Cyclin-H" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 GO:GO:0016301 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GO:GO:0005675
PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569 HOGENOM:HOG000232149
HGNC:HGNC:1594 ChiTaRS:CCNH EMBL:AC018754 IPI:IPI00556112
SMR:D6RHI7 Ensembl:ENST00000504878 Uniprot:D6RHI7
Length = 249
Score = 159 (61.0 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 47/149 (31%), Positives = 73/149 (48%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 5 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK 64
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGM------NDINMTHLSWGIL 216
++ ILE E+ +++ LN++L+V +PYR FL D N + + L
Sbjct: 65 ---ALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDFL 121
Query: 217 NDTYKMDLILVHPPHLIALACIYIASVYR 245
N D L++ P IAL I ++S R
Sbjct: 122 NRIALTDAYLLYTPSQIALTAI-LSSASR 149
>ZFIN|ZDB-GENE-030131-183 [details] [associations]
symbol:ccnt2b "cyclin T2b" species:7955 "Danio
rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR015429
ZFIN:ZDB-GENE-030131-183 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG5333
PANTHER:PTHR10026 GeneTree:ENSGT00690000102036 HOGENOM:HOG000013208
HOVERGEN:HBG050843 KO:K15188 OrthoDB:EOG40P469 EMBL:CU571316
EMBL:BC048886 IPI:IPI00503670 RefSeq:NP_997751.1 UniGene:Dr.76751
SMR:Q802D2 Ensembl:ENSDART00000053045 GeneID:321464 KEGG:dre:321464
CTD:321464 InParanoid:Q802D2 NextBio:20807394 Uniprot:Q802D2
Length = 569
Score = 167 (63.8 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 46/173 (26%), Positives = 84/173 (48%)
Query: 82 SLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAE 141
S R + + +++ Q + V Q + TA+ YM R Y S T++ ++++PT L+LA+K E
Sbjct: 36 SYRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMLNSFTKFHRNIISPTTLFLAAKVE 95
Query: 142 ESTVQARLLVFYIKKIYS---------DEK---YRYEVKDILEMEMKILEALNYYLVVFH 189
E Q R L IK ++ D K Y + ++++ +E +L+ L + + + H
Sbjct: 96 E---QPRKLEHVIKVAHACLNPHDPPLDSKSSAYLQQAQELVLLETIVLQTLGFEITIEH 152
Query: 190 PYRSLVQFLQDA-GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
P+ +V+ Q D+ T N + L H P ++A CI++A
Sbjct: 153 PHTDVVRCTQLVRASKDLAQTSYFMAT-NSLHLTTFCLQHKPTVVACVCIHLA 204
>UNIPROTKB|E2RNV9 [details] [associations]
symbol:CCNT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GeneTree:ENSGT00690000102036 EMBL:AAEX03011909
Ensembl:ENSCAFT00000008092 Uniprot:E2RNV9
Length = 678
Score = 168 (64.2 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 47/173 (27%), Positives = 86/173 (49%)
Query: 82 SLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAE 141
S R + + +++ Q + V Q + TA+ YM R Y S T+++ ++++PT L+LA+K E
Sbjct: 47 SYRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNRNIISPTALFLAAKVE 106
Query: 142 ESTVQARLLVFYIKKIYS---------DEK---YRYEVKDILEMEMKILEALNYYLVVFH 189
E QAR L IK ++ D K Y + ++++ +E +L+ L + + + H
Sbjct: 107 E---QARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVLLETIMLQTLGFEITIEH 163
Query: 190 PYRSLVQFLQDA-GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
P+ +V+ Q D+ T N + L + P +IA CI++A
Sbjct: 164 PHTDVVKCTQLVRASKDLAQTSYFMAT-NSLHLTTFCLQYKPTVIACVCIHLA 215
>UNIPROTKB|D6RG18 [details] [associations]
symbol:CCNH "Cyclin-H" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GO:GO:0005675
PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569 HOGENOM:HOG000232149
OrthoDB:EOG47SSF4 HGNC:HGNC:1594 ChiTaRS:CCNH EMBL:AC018754
IPI:IPI00965191 ProteinModelPortal:D6RG18 SMR:D6RG18
Ensembl:ENST00000508855 ArrayExpress:D6RG18 Bgee:D6RG18
Uniprot:D6RG18
Length = 255
Score = 159 (61.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 47/149 (31%), Positives = 73/149 (48%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 5 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK 64
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGM------NDINMTHLSWGIL 216
++ ILE E+ +++ LN++L+V +PYR FL D N + + L
Sbjct: 65 ---ALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDFL 121
Query: 217 NDTYKMDLILVHPPHLIALACIYIASVYR 245
N D L++ P IAL I ++S R
Sbjct: 122 NRIALTDAYLLYTPSQIALTAI-LSSASR 149
>UNIPROTKB|F2Z2C9 [details] [associations]
symbol:CCNT2 "Cyclin-T2" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 EMBL:AC016725
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
HGNC:HGNC:1600 IPI:IPI00927944 SMR:F2Z2C9 Ensembl:ENST00000419781
Ensembl:ENST00000452839 Uniprot:F2Z2C9
Length = 173
Score = 145 (56.1 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 44/166 (26%), Positives = 82/166 (49%)
Query: 48 SGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITSSLRCR--CPTIYRNLAQHVKVRQRVV 105
SG ++ F+T++ N T R ++ L CR + + + Q + V Q +
Sbjct: 3 SGRGASSRWFFTRE--QLEN--TPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTI 58
Query: 106 ATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS------ 159
TA+ YM R Y S T+++ ++++ T L+LA+K EE QAR L IK ++
Sbjct: 59 NTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEE---QARKLEHVIKVAHACLHPLE 115
Query: 160 ---DEK---YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ 199
D K Y + ++++ +E +L+ L + + + HP+ +V+ Q
Sbjct: 116 PLLDTKCDAYLQQTQELVILETIMLQTLGFEITIEHPHTDVVKCTQ 161
>UNIPROTKB|F8WDY7 [details] [associations]
symbol:CCNT2 "Cyclin-T2" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 EMBL:AC016725
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
HGNC:HGNC:1600 IPI:IPI00925381 ProteinModelPortal:F8WDY7 SMR:F8WDY7
Ensembl:ENST00000417175 ArrayExpress:F8WDY7 Bgee:F8WDY7
Uniprot:F8WDY7
Length = 173
Score = 145 (56.1 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 44/166 (26%), Positives = 82/166 (49%)
Query: 48 SGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITSSLRCR--CPTIYRNLAQHVKVRQRVV 105
SG ++ F+T++ N T R ++ L CR + + + Q + V Q +
Sbjct: 3 SGRGASSRWFFTRE--QLEN--TPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTI 58
Query: 106 ATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS------ 159
TA+ YM R Y S T+++ ++++ T L+LA+K EE QAR L IK ++
Sbjct: 59 NTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEE---QARKLEHVIKVAHACLHPLE 115
Query: 160 ---DEK---YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ 199
D K Y + ++++ +E +L+ L + + + HP+ +V+ Q
Sbjct: 116 PLLDTKCDAYLQQTQELVILETIMLQTLGFEITIEHPHTDVVKCTQ 161
>UNIPROTKB|E2RNV5 [details] [associations]
symbol:CCNT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000079 "regulation
of cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000102036 KO:K15188 CTD:905
OMA:YQVGYGH EMBL:AAEX03011909 RefSeq:XP_533333.2
Ensembl:ENSCAFT00000008096 GeneID:476126 KEGG:cfa:476126
NextBio:20851843 Uniprot:E2RNV5
Length = 733
Score = 168 (64.2 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 47/173 (27%), Positives = 86/173 (49%)
Query: 82 SLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAE 141
S R + + +++ Q + V Q + TA+ YM R Y S T+++ ++++PT L+LA+K E
Sbjct: 35 SYRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNRNIISPTALFLAAKVE 94
Query: 142 ESTVQARLLVFYIKKIYS---------DEK---YRYEVKDILEMEMKILEALNYYLVVFH 189
E QAR L IK ++ D K Y + ++++ +E +L+ L + + + H
Sbjct: 95 E---QARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVLLETIMLQTLGFEITIEH 151
Query: 190 PYRSLVQFLQDA-GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
P+ +V+ Q D+ T N + L + P +IA CI++A
Sbjct: 152 PHTDVVKCTQLVRASKDLAQTSYFMAT-NSLHLTTFCLQYKPTVIACVCIHLA 203
>UNIPROTKB|G3V2Q3 [details] [associations]
symbol:CCNK "Cyclin-K" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 EMBL:AL110504 PANTHER:PTHR10026 HGNC:HGNC:1596
ChiTaRS:CCNK ProteinModelPortal:G3V2Q3 SMR:G3V2Q3
Ensembl:ENST00000557441 ArrayExpress:G3V2Q3 Bgee:G3V2Q3
Uniprot:G3V2Q3
Length = 227
Score = 155 (59.6 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 46/196 (23%), Positives = 95/196 (48%)
Query: 59 TKKTWMW--RNLL-TEKRASLLKITSSLRCR---CPTIYRNLAQHVKVRQRVVATAVTYM 112
TK W W ++L T + L + R R I+ ++ + + +AT + Y
Sbjct: 20 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIF-DVGTRLGLHYDTLATGIIYF 78
Query: 113 RRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY---EVKD 169
R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++ + K+
Sbjct: 79 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE 138
Query: 170 -ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYKMDLI 225
++ +E +L+ + + L V HPY+ L+++ + N I + ++W +ND+ L
Sbjct: 139 EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLS 198
Query: 226 LVHPPHLIALACIYIA 241
L P +IA+A +Y+A
Sbjct: 199 LQWEPEIIAVAVMYLA 214
>UNIPROTKB|E1B6Z5 [details] [associations]
symbol:CCNT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000079 "regulation
of cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000102036 KO:K15188 CTD:905
OMA:YQVGYGH EMBL:DAAA02005004 IPI:IPI00693946 RefSeq:NP_001179460.1
UniGene:Bt.36651 PRIDE:E1B6Z5 Ensembl:ENSBTAT00000018816
GeneID:521089 KEGG:bta:521089 NextBio:20873238 Uniprot:E1B6Z5
Length = 731
Score = 167 (63.8 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 82 SLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAE 141
S R + + + + Q + V Q + TA+ YM R Y S T++ ++++PT L+LA+K E
Sbjct: 35 SYRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFSRYMISPTALFLAAKVE 94
Query: 142 ESTVQARLLVFYIKKIYS---------DEK---YRYEVKDILEMEMKILEALNYYLVVFH 189
E QAR L IK ++ D K Y + ++++ +E +L+ L + + + H
Sbjct: 95 E---QARKLEHVIKVAHACLHPLEPLLDTKCDTYLQQTQELVLLETIMLQTLGFEITIEH 151
Query: 190 PYRSLVQFLQDA-GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
P+ +V+ Q D+ T N + L + P +IA CI++A
Sbjct: 152 PHTDVVKCTQLVRASKDLAQTSYFMAT-NSLHLTTFCLQYKPTVIACVCIHLA 203
>UNIPROTKB|E2R5P2 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 CTD:902 OMA:EILATCV
EMBL:AAEX03002082 RefSeq:XP_536300.3 Ensembl:ENSCAFT00000036048
GeneID:479156 KEGG:cfa:479156 Uniprot:E2R5P2
Length = 323
Score = 161 (61.7 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 48/149 (32%), Positives = 74/149 (49%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 79 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK 138
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAG-----MNDINMTHLSWG-IL 216
++ ILE E+ +++ LN++L+V +PYR FL D M + M + L
Sbjct: 139 ---ALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPMMENPEMLRKTADDFL 195
Query: 217 NDTYKMDLILVHPPHLIALACIYIASVYR 245
N D L++ P IAL I ++S R
Sbjct: 196 NRIALTDAYLLYTPSQIALTAI-LSSASR 223
>UNIPROTKB|F6V6A9 [details] [associations]
symbol:CCNT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GeneTree:ENSGT00690000102036 OMA:ANVKSQY EMBL:AAEX03015080
Ensembl:ENSCAFT00000014180 Uniprot:F6V6A9
Length = 652
Score = 166 (63.5 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 50/205 (24%), Positives = 92/205 (44%)
Query: 47 ISGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITSSLRCRCPTIYRNLAQHVKVRQRVVA 106
+ G R+ N W N + + S R + + +++ Q + V Q +
Sbjct: 1 MEGERKNNNKRWYFSREQLENSPSRRFGLDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLV------FYIKKIYSD 160
TA+ YM R Y +S T++ + VAP L+LA+K EE + ++ + ++ D
Sbjct: 61 TAIVYMHRFYMIQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHACLHPQESLPD 120
Query: 161 ---EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDA-GMNDINMTHLSWGIL 216
E Y +V+D++ +E IL+ L + L + HP+ +V+ Q D+ T
Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMAT- 179
Query: 217 NDTYKMDLILVHPPHLIALACIYIA 241
N + L + P ++A CI++A
Sbjct: 180 NSLHLTTFSLQYTPPVVACVCIHLA 204
>RGD|1309205 [details] [associations]
symbol:Ccnt2 "cyclin T2" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] InterPro:IPR015429 RGD:1309205
GO:GO:0005634 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GeneTree:ENSGT00690000102036
KO:K15188 CTD:905 OMA:YQVGYGH EMBL:CH473958 OrthoDB:EOG40P469
IPI:IPI00564348 RefSeq:NP_001100641.1 UniGene:Rn.21407
Ensembl:ENSRNOT00000024602 GeneID:304758 KEGG:rno:304758
UCSC:RGD:1309205 NextBio:653562 Uniprot:D3ZGL6
Length = 722
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/173 (27%), Positives = 86/173 (49%)
Query: 82 SLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAE 141
S R + + +++ Q + V Q + TA+ YM R Y S T+++ ++++PT L+LA+K E
Sbjct: 35 SHRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNRNIISPTALFLAAKVE 94
Query: 142 ESTVQARLLVFYIKKIYS---------DEK---YRYEVKDILEMEMKILEALNYYLVVFH 189
E QAR L IK ++ D K Y + ++++ +E +L+ L + + + H
Sbjct: 95 E---QARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVLLETIMLQTLGFEITIEH 151
Query: 190 PYRSLVQFLQDA-GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
P+ +V+ Q D+ T N + L + P +IA CI++A
Sbjct: 152 PHTDVVKCTQLVRASKDLAQTSYFMAT-NSLHLTTFCLQYKPTVIACVCIHLA 203
>MGI|MGI:1328363 [details] [associations]
symbol:Ccnt1 "cyclin T1" species:10090 "Mus musculus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008024
"positive transcription elongation factor complex b"
evidence=ISO;TAS] [GO:0017069 "snRNA binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR015429
MGI:MGI:1328363 GO:GO:0000079 GO:GO:0051301 GO:GO:0006355
GO:GO:0006468 GO:GO:0006351 GO:GO:0003682 GO:GO:0044212
GO:GO:0007049 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0017069 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
CTD:904 GeneTree:ENSGT00690000102036 HOGENOM:HOG000013208
HOVERGEN:HBG050843 KO:K15188 OMA:ANVKSQY OrthoDB:EOG41NTKJ
GO:GO:0008024 EMBL:AF095640 EMBL:AF109179 EMBL:AF087662
EMBL:AF113951 EMBL:AK133168 EMBL:AC138221 EMBL:BC131685
IPI:IPI00316214 IPI:IPI00653975 RefSeq:NP_033963.1 UniGene:Mm.29941
UniGene:Mm.86538 ProteinModelPortal:Q9QWV9 IntAct:Q9QWV9
STRING:Q9QWV9 PhosphoSite:Q9QWV9 PaxDb:Q9QWV9 PRIDE:Q9QWV9
Ensembl:ENSMUST00000012104 Ensembl:ENSMUST00000169707 GeneID:12455
KEGG:mmu:12455 InParanoid:Q9QWV9 ChiTaRS:CCNT1 NextBio:281302
CleanEx:MM_CCNT1 Genevestigator:Q9QWV9
GermOnline:ENSMUSG00000011960 Uniprot:Q9QWV9
Length = 724
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 51/209 (24%), Positives = 95/209 (45%)
Query: 47 ISGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITS----SLRCRCPTIYRNLAQHVKVRQ 102
+ G R+ N W + R L + + S S R + + +++ Q + V Q
Sbjct: 1 MEGERKNNNKRW----YFTREQLENSPSRRFGVDSDKELSYRQQAANLLQDMGQRLNVSQ 56
Query: 103 RVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLV------FYIKK 156
+ TA+ YM R Y +S T++ + +AP L+LA+K EE + ++ + ++
Sbjct: 57 LTINTAIVYMHRFYMIQSFTQFHRYSMAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQE 116
Query: 157 IYSD---EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDA-GMNDINMTHLS 212
D E Y +V+D++ +E IL+ L + L + HP+ +V+ Q D+ T
Sbjct: 117 SLPDTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYF 176
Query: 213 WGILNDTYKMDLILVHPPHLIALACIYIA 241
N + L + P ++A CI++A
Sbjct: 177 MAT-NSLHLTTFSLQYTPPVVACVCIHLA 204
>RGD|1311151 [details] [associations]
symbol:Ccnt1 "cyclin T1" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=ISO] [GO:0008024
"positive transcription elongation factor complex b" evidence=ISO]
[GO:0017069 "snRNA binding" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR015429 RGD:1311151 GO:GO:0005634
GO:GO:0000079 GO:GO:0006355 GO:GO:0003677 GO:GO:0006468
GO:GO:0003682 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0017069 PANTHER:PTHR10026 OMA:ANVKSQY OrthoDB:EOG41NTKJ
IPI:IPI00361711 Ensembl:ENSRNOT00000015376 UCSC:RGD:1311151
ArrayExpress:D3ZMZ2 Uniprot:D3ZMZ2
Length = 724
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 51/209 (24%), Positives = 95/209 (45%)
Query: 47 ISGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITS----SLRCRCPTIYRNLAQHVKVRQ 102
+ G R+ N W + R L + + S S R + + +++ Q + V Q
Sbjct: 1 MEGERKNNNKRW----YFTREQLENSPSRRFGVDSDKELSYRQQAANLLQDMGQRLNVSQ 56
Query: 103 RVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLV------FYIKK 156
+ TA+ YM R Y +S T++ + +AP L+LA+K EE + ++ + ++
Sbjct: 57 LTINTAIVYMHRFYMIQSFTQFHRYSMAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQE 116
Query: 157 IYSD---EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDA-GMNDINMTHLS 212
D E Y +V+D++ +E IL+ L + L + HP+ +V+ Q D+ T
Sbjct: 117 SLPDTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYF 176
Query: 213 WGILNDTYKMDLILVHPPHLIALACIYIA 241
N + L + P ++A CI++A
Sbjct: 177 MAT-NSLHLTTFSLQYTPPVVACVCIHLA 204
>UNIPROTKB|E2QRW8 [details] [associations]
symbol:CCNT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
CTD:904 KO:K15188 RefSeq:XP_543690.2 Ensembl:ENSCAFT00000014180
GeneID:486564 KEGG:cfa:486564 NextBio:20860323 Uniprot:E2QRW8
Length = 725
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/205 (24%), Positives = 92/205 (44%)
Query: 47 ISGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITSSLRCRCPTIYRNLAQHVKVRQRVVA 106
+ G R+ N W N + + S R + + +++ Q + V Q +
Sbjct: 1 MEGERKNNNKRWYFSREQLENSPSRRFGLDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLV------FYIKKIYSD 160
TA+ YM R Y +S T++ + VAP L+LA+K EE + ++ + ++ D
Sbjct: 61 TAIVYMHRFYMIQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHACLHPQESLPD 120
Query: 161 ---EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDA-GMNDINMTHLSWGIL 216
E Y +V+D++ +E IL+ L + L + HP+ +V+ Q D+ T
Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMAT- 179
Query: 217 NDTYKMDLILVHPPHLIALACIYIA 241
N + L + P ++A CI++A
Sbjct: 180 NSLHLTTFSLQYTPPVVACVCIHLA 204
>UNIPROTKB|O60583 [details] [associations]
symbol:CCNT2 "Cyclin-T2" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0006368 "transcription elongation from
RNA polymerase II promoter" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
Reactome:REACT_71 InterPro:IPR015429 EMBL:AF048732
Reactome:REACT_111102 Reactome:REACT_116125 GO:GO:0019048
GO:GO:0000079 GO:GO:0005654 GO:GO:0016032 GO:GO:0051301
GO:GO:0045944 GO:GO:0007049 EMBL:CH471058 EMBL:AC016725
GO:GO:0007179 GO:GO:0006368 GO:GO:0006367 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 Reactome:REACT_1788 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 HOVERGEN:HBG050843 KO:K15188 Reactome:REACT_1892
EMBL:AF048731 EMBL:AY865621 EMBL:AK292913 EMBL:BC114366
IPI:IPI00030313 IPI:IPI00217564 RefSeq:NP_001232.1
RefSeq:NP_490595.1 UniGene:Hs.731949 PDB:2IVX PDBsum:2IVX
ProteinModelPortal:O60583 SMR:O60583 IntAct:O60583 STRING:O60583
PhosphoSite:O60583 PaxDb:O60583 PRIDE:O60583
Ensembl:ENST00000264157 Ensembl:ENST00000295238 GeneID:905
KEGG:hsa:905 UCSC:uc002tub.2 UCSC:uc002tuc.2 CTD:905
GeneCards:GC02P135698 HGNC:HGNC:1600 HPA:HPA005559 MIM:603862
neXtProt:NX_O60583 PharmGKB:PA26164 InParanoid:O60583 OMA:YQVGYGH
PhylomeDB:O60583 BindingDB:O60583 ChEMBL:CHEMBL1293321
EvolutionaryTrace:O60583 GenomeRNAi:905 NextBio:3736
PMAP-CutDB:O60583 ArrayExpress:O60583 Bgee:O60583 CleanEx:HS_CCNT2
Genevestigator:O60583 GermOnline:ENSG00000082258 Uniprot:O60583
Length = 730
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 54/209 (25%), Positives = 98/209 (46%)
Query: 48 SGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITSSLRCR--CPTIYRNLAQHVKVRQRVV 105
SG ++ F+T++ N T R ++ L CR + + + Q + V Q +
Sbjct: 3 SGRGASSRWFFTRE--QLEN--TPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTI 58
Query: 106 ATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS------ 159
TA+ YM R Y S T+++ ++++ T L+LA+K EE QAR L IK ++
Sbjct: 59 NTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEE---QARKLEHVIKVAHACLHPLE 115
Query: 160 ---DEK---YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDA-GMNDINMTHLS 212
D K Y + ++++ +E +L+ L + + + HP+ +V+ Q D+ T
Sbjct: 116 PLLDTKCDAYLQQTQELVILETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYF 175
Query: 213 WGILNDTYKMDLILVHPPHLIALACIYIA 241
N + L + P +IA CI++A
Sbjct: 176 MAT-NSLHLTTFCLQYKPTVIACVCIHLA 203
>ZFIN|ZDB-GENE-030131-5779 [details] [associations]
symbol:ccnt2a "cyclin T2a" species:7955 "Danio
rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] InterPro:IPR015429
ZFIN:ZDB-GENE-030131-5779 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG5333
PANTHER:PTHR10026 GeneTree:ENSGT00690000102036 HOGENOM:HOG000013208
HOVERGEN:HBG050843 KO:K15188 OMA:YQVGYGH OrthoDB:EOG40P469
EMBL:BX936418 EMBL:BC044378 IPI:IPI00498440 RefSeq:NP_956122.1
UniGene:Dr.7339 SMR:Q803Q8 STRING:Q803Q8 Ensembl:ENSDART00000053282
GeneID:327568 KEGG:dre:327568 CTD:327568 InParanoid:Q803Q8
NextBio:20810089 Uniprot:Q803Q8
Length = 630
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 82 SLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAE 141
S R + + +++ Q + V Q + TA+ YM R Y S T++ ++++PT L+LA+K E
Sbjct: 35 SYRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMYHSFTKFHRNIISPTTLFLAAKVE 94
Query: 142 ESTVQARLLVFYIKKIYS---------DEK---YRYEVKDILEMEMKILEALNYYLVVFH 189
E Q R L IK ++ D K Y + ++++ +E +L+ L + + + H
Sbjct: 95 E---QPRKLEHVIKVAHACLNPQEPPLDTKSNAYLQQAQELVILETIVLQTLGFEITIEH 151
Query: 190 PYRSLVQFLQDA-GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
P+ +V+ Q D+ T N + L H P +IA CI++A
Sbjct: 152 PHTDVVKCSQLVRASKDLAQTSYFMAT-NSLHLTTFCLQHKPTVIACVCIHLA 203
>UNIPROTKB|F1S0D2 [details] [associations]
symbol:F1S0D2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000102036 OMA:YQVGYGH
EMBL:CU861988 Ensembl:ENSSSCT00000017097 Uniprot:F1S0D2
Length = 692
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 82 SLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAE 141
S R + + + + Q + V Q + TA+ YM R Y S T+++ + ++PT L+LA+K E
Sbjct: 35 SYRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNRYTISPTALFLAAKVE 94
Query: 142 ESTVQARLLVFYIKKIYS---------DEK---YRYEVKDILEMEMKILEALNYYLVVFH 189
E QAR L IK ++ D K Y + ++++ +E +L+ L + + + H
Sbjct: 95 E---QARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVLLETIMLQTLGFEITIEH 151
Query: 190 PYRSLVQFLQDA-GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
P+ +V+ Q D+ T N + L + P +IA CI++A
Sbjct: 152 PHTDVVKCTQLVRASKDLAQTSYFMAT-NSLHLTTFCLQYKPTVIACVCIHLA 203
>ZFIN|ZDB-GENE-030131-4813 [details] [associations]
symbol:ccnl1b "cyclin L1b" species:7955 "Danio
rerio" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004367 InterPro:IPR015429
InterPro:IPR015431 InterPro:IPR017060 Pfam:PF02984
PIRSF:PIRSF036580 ZFIN:ZDB-GENE-030131-4813 GO:GO:0005634
GO:GO:0000079 GO:GO:0006355 GO:GO:0006351 GO:GO:0006396
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 PANTHER:PTHR10026 HOGENOM:HOG000231292
HOVERGEN:HBG056044 OrthoDB:EOG4ZPDVD EMBL:BC045378 IPI:IPI00488786
RefSeq:NP_956034.1 UniGene:Dr.80033 ProteinModelPortal:Q7ZVX0
PRIDE:Q7ZVX0 GeneID:326088 KEGG:dre:326088 CTD:326088
InParanoid:Q7ZVX0 NextBio:20809629 ArrayExpress:Q7ZVX0
PANTHER:PTHR10026:SF2 Uniprot:Q7ZVX0
Length = 498
Score = 163 (62.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 44/158 (27%), Positives = 82/158 (51%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT +R + KS +++ +VA C+ LASK EES + R + VF+ +
Sbjct: 77 LRLPQVAMATGQVIFQRFFFSKSFVKHNFEIVAMACVNLASKIEESPRRVRDVINVFHHL 136
Query: 155 KK--------IYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGMN 204
K+ + D+ Y +++ E +IL+ L + + V HP++ +V +LQ + N
Sbjct: 137 KQGKGKKSTPLILDQNYINTKNQVIKAERRILKELGFCVHVKHPHKIIVMYLQVLECEKN 196
Query: 205 DINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
+ + +W +ND + + P IA ACIY+A+
Sbjct: 197 QM-LVQTAWNYMNDALRTSAFVRFEPETIACACIYLAA 233
>UNIPROTKB|O60563 [details] [associations]
symbol:CCNT1 "Cyclin-T1" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0017069 "snRNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008024 "positive
transcription elongation factor complex b" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006468 "protein phosphorylation" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0050434
"positive regulation of viral transcription" evidence=TAS]
Reactome:REACT_71 InterPro:IPR015429 Reactome:REACT_111102
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0000079 GO:GO:0016032
GO:GO:0051301 GO:GO:0003677 GO:GO:0045944 GO:GO:0006468
GO:GO:0003682 GO:GO:0007049 GO:GO:0007179 GO:GO:0006368
GO:GO:0006367 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
Reactome:REACT_1788 GO:GO:0017069 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 GO:GO:0050434 CTD:904 HOGENOM:HOG000013208
HOVERGEN:HBG050843 KO:K15188 OMA:ANVKSQY OrthoDB:EOG41NTKJ
GO:GO:0008024 EMBL:AF045161 EMBL:AF048730 IPI:IPI00030247
RefSeq:NP_001231.2 UniGene:Hs.92308 PDB:2PK2 PDB:3BLH PDB:3BLQ
PDB:3BLR PDB:3LQ5 PDB:3MI9 PDB:3MIA PDB:3MY1 PDB:3TN8 PDB:3TNH
PDB:3TNI PDB:4BCF PDB:4BCH PDB:4BCI PDB:4BCJ PDB:4EC8 PDB:4EC9
PDBsum:2PK2 PDBsum:3BLH PDBsum:3BLQ PDBsum:3BLR PDBsum:3LQ5
PDBsum:3MI9 PDBsum:3MIA PDBsum:3MY1 PDBsum:3TN8 PDBsum:3TNH
PDBsum:3TNI PDBsum:4BCF PDBsum:4BCH PDBsum:4BCI PDBsum:4BCJ
PDBsum:4EC8 PDBsum:4EC9 ProteinModelPortal:O60563 SMR:O60563
DIP:DIP-29891N IntAct:O60563 MINT:MINT-142682 STRING:O60563
PhosphoSite:O60563 PaxDb:O60563 PeptideAtlas:O60563 PRIDE:O60563
Ensembl:ENST00000261900 GeneID:904 KEGG:hsa:904 UCSC:uc001rsd.4
GeneCards:GC12M049086 HGNC:HGNC:1599 HPA:CAB009016 HPA:HPA004892
MIM:143055 neXtProt:NX_O60563 PharmGKB:PA26163 InParanoid:O60563
PhylomeDB:O60563 Reactome:REACT_1892 BindingDB:O60563
ChEMBL:CHEMBL2108 EvolutionaryTrace:O60563 GenomeRNAi:904
NextBio:3732 ArrayExpress:O60563 Bgee:O60563 CleanEx:HS_CCNT1
Genevestigator:O60563 GermOnline:ENSG00000129315 Uniprot:O60563
Length = 726
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/205 (24%), Positives = 92/205 (44%)
Query: 47 ISGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITSSLRCRCPTIYRNLAQHVKVRQRVVA 106
+ G R+ N W N + + S R + + +++ Q + V Q +
Sbjct: 1 MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLV------FYIKKIYSD 160
TA+ YM R Y +S T++ + VAP L+LA+K EE + ++ + ++ D
Sbjct: 61 TAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120
Query: 161 ---EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDA-GMNDINMTHLSWGIL 216
E Y +V+D++ +E IL+ L + L + HP+ +V+ Q D+ T
Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMAT- 179
Query: 217 NDTYKMDLILVHPPHLIALACIYIA 241
N + L + P ++A CI++A
Sbjct: 180 NSLHLTTFSLQYTPPVVACVCIHLA 204
>UNIPROTKB|Q9XT26 [details] [associations]
symbol:CCNT1 "Cyclin-T1" species:9796 "Equus caballus"
[GO:0008024 "positive transcription elongation factor complex b"
evidence=ISS] InterPro:IPR015429 GO:GO:0019048 GO:GO:0000079
GO:GO:0051301 GO:GO:0006355 GO:GO:0003677 GO:GO:0006468
GO:GO:0006351 GO:GO:0003682 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0017069 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 CTD:904 GeneTree:ENSGT00690000102036
HOGENOM:HOG000013208 HOVERGEN:HBG050843 KO:K15188 OMA:ANVKSQY
OrthoDB:EOG41NTKJ GO:GO:0008024 EMBL:AF137509 EMBL:AF190905
RefSeq:NP_001075315.1 UniGene:Eca.12914 PDB:2W2H PDBsum:2W2H
ProteinModelPortal:Q9XT26 SMR:Q9XT26 STRING:Q9XT26
Ensembl:ENSECAT00000016868 GeneID:100033893 KEGG:ecb:100033893
InParanoid:Q9XT26 EvolutionaryTrace:Q9XT26 Uniprot:Q9XT26
Length = 727
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/205 (24%), Positives = 92/205 (44%)
Query: 47 ISGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITSSLRCRCPTIYRNLAQHVKVRQRVVA 106
+ G R+ N W N + + S R + + +++ Q + V Q +
Sbjct: 1 MEGERKNNNKRWYFTREQLENSPSRRFGLDPDKELSYRQQAANLLQDMGQRLNVSQLTIN 60
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLV------FYIKKIYSD 160
TA+ YM R Y +S T++ + VAP L+LA+K EE + ++ + ++ D
Sbjct: 61 TAIVYMHRFYMIQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHACLHPQESLPD 120
Query: 161 ---EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDA-GMNDINMTHLSWGIL 216
E Y +V+D++ +E IL+ L + L + HP+ +V+ Q D+ T
Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMAT- 179
Query: 217 NDTYKMDLILVHPPHLIALACIYIA 241
N + L + P ++A CI++A
Sbjct: 180 NSLHLTTFSLQYTPPVVACVCIHLA 204
>UNIPROTKB|F1NPF6 [details] [associations]
symbol:CCNL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004367 InterPro:IPR015429 InterPro:IPR017060
Pfam:PF02984 PIRSF:PIRSF036580 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 GO:GO:0006396 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 IPI:IPI00820454
OMA:TGHRYER EMBL:AADN02040864 Ensembl:ENSGALT00000002357
ArrayExpress:F1NPF6 Uniprot:F1NPF6
Length = 534
Score = 163 (62.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/159 (28%), Positives = 84/159 (52%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFYI- 154
+++ Q +AT +R + KS ++ V+ C++LASK EE+ + R + VF+
Sbjct: 103 LRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRL 162
Query: 155 ------KK---IYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
KK + D++Y I++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 163 RHLREKKKPVPLILDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 222
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N ++ SW +ND+ + D+ + P IA ACIY+A+
Sbjct: 223 NQ-HLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAA 260
>UNIPROTKB|Q5ZJP9 [details] [associations]
symbol:CCNL1 "Cyclin-L1" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004367 InterPro:IPR015429 InterPro:IPR017060
Pfam:PF02984 PIRSF:PIRSF036580 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 GO:GO:0006351 GO:GO:0006396 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
EMBL:AJ720385 IPI:IPI00820454 RefSeq:NP_989801.2 UniGene:Gga.29650
ProteinModelPortal:Q5ZJP9 GeneID:395124 KEGG:gga:395124 CTD:81669
HOGENOM:HOG000231292 HOVERGEN:HBG056044 InParanoid:Q5ZJP9
OrthoDB:EOG4ZPDVD NextBio:20815217 Uniprot:Q5ZJP9
Length = 534
Score = 163 (62.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/159 (28%), Positives = 84/159 (52%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFYI- 154
+++ Q +AT +R + KS ++ V+ C++LASK EE+ + R + VF+
Sbjct: 103 LRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRL 162
Query: 155 ------KK---IYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
KK + D++Y I++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 163 RHLREKKKPVPLILDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 222
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N ++ SW +ND+ + D+ + P IA ACIY+A+
Sbjct: 223 NQ-HLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAA 260
>UNIPROTKB|P51946 [details] [associations]
symbol:CCNH "Cyclin-H" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA;TAS]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0019907
"cyclin-dependent protein kinase activating kinase holoenzyme
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005675 "holo TFIIH complex" evidence=IDA] [GO:0008353 "RNA
polymerase II carboxy-terminal domain kinase activity"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=TAS] [GO:0000080 "G1
phase of mitotic cell cycle" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0000718 "nucleotide-excision
repair, DNA damage removal" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS] [GO:0006360
"transcription from RNA polymerase I promoter" evidence=TAS]
[GO:0006361 "transcription initiation from RNA polymerase I
promoter" evidence=TAS] [GO:0006362 "transcription elongation from
RNA polymerase I promoter" evidence=TAS] [GO:0006363 "termination
of RNA polymerase I transcription" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0006370
"7-methylguanosine mRNA capping" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0050434 "positive regulation of viral
transcription" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006468 "protein phosphorylation" evidence=IDA]
Reactome:REACT_216 Reactome:REACT_71 InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
Reactome:REACT_116125 Reactome:REACT_115566 GO:GO:0000086
GO:GO:0000079 GO:GO:0016032 GO:GO:0000082 Reactome:REACT_1675
GO:GO:0045944 GO:GO:0006468 GO:GO:0016301 GO:GO:0006368
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0000084
GO:GO:0006367 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 Reactome:REACT_1788 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
TIGRFAMs:TIGR00569 CTD:902 HOGENOM:HOG000232149 HOVERGEN:HBG050840
OrthoDB:EOG47SSF4 EMBL:U11791 EMBL:U12685 EMBL:CR407658
EMBL:AF477979 EMBL:BC005280 EMBL:BC016705 EMBL:BC016823
EMBL:BC022351 IPI:IPI00021305 PIR:I38731 RefSeq:NP_001230.1
UniGene:Hs.292524 PDB:1JKW PDB:1KXU PDBsum:1JKW PDBsum:1KXU
DisProt:DP00307 ProteinModelPortal:P51946 SMR:P51946 DIP:DIP-5996N
IntAct:P51946 MINT:MINT-1434271 STRING:P51946 PhosphoSite:P51946
DMDM:1706232 PaxDb:P51946 PeptideAtlas:P51946 PRIDE:P51946
DNASU:902 Ensembl:ENST00000256897 GeneID:902 KEGG:hsa:902
UCSC:uc003kja.3 GeneCards:GC05M086690 HGNC:HGNC:1594 HPA:CAB019416
MIM:601953 neXtProt:NX_P51946 PharmGKB:PA26159 InParanoid:P51946
OMA:EILATCV PhylomeDB:P51946 BindingDB:P51946 ChEMBL:CHEMBL2165
ChiTaRS:CCNH EvolutionaryTrace:P51946 GenomeRNAi:902 NextBio:3728
ArrayExpress:P51946 Bgee:P51946 CleanEx:HS_CCNH
Genevestigator:P51946 GermOnline:ENSG00000134480 GO:GO:0019907
GO:GO:0006370 GO:GO:0000718 GO:GO:0050434 GO:GO:0006363
GO:GO:0006362 GO:GO:0006361 GO:GO:0006283 Uniprot:P51946
Length = 323
Score = 159 (61.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 47/149 (31%), Positives = 73/149 (48%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 79 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK 138
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGM------NDINMTHLSWGIL 216
++ ILE E+ +++ LN++L+V +PYR FL D N + + L
Sbjct: 139 ---ALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDFL 195
Query: 217 NDTYKMDLILVHPPHLIALACIYIASVYR 245
N D L++ P IAL I ++S R
Sbjct: 196 NRIALTDAYLLYTPSQIALTAI-LSSASR 223
>UNIPROTKB|Q4R7U4 [details] [associations]
symbol:CCNH "Cyclin-H" species:9541 "Macaca fascicularis"
[GO:0005675 "holo TFIIH complex" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=ISS] [GO:0004672
"protein kinase activity" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0008353 "RNA polymerase II
carboxy-terminal domain kinase activity" evidence=ISS]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 GO:GO:0006468
GO:GO:0007049 GO:GO:0006366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 PANTHER:PTHR10026 HSSP:P51946 GO:GO:0005675
PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569 HOVERGEN:HBG050840
EMBL:AB168718 ProteinModelPortal:Q4R7U4 SMR:Q4R7U4 Uniprot:Q4R7U4
Length = 323
Score = 159 (61.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 47/149 (31%), Positives = 73/149 (48%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 79 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK 138
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGM------NDINMTHLSWGIL 216
++ ILE E+ +++ LN++L+V +PYR FL D N + + L
Sbjct: 139 ---ALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDFL 195
Query: 217 NDTYKMDLILVHPPHLIALACIYIASVYR 245
N D L++ P IAL I ++S R
Sbjct: 196 NRIALTDAYLLYTPSQIALTAI-LSSASR 223
>UNIPROTKB|Q8HXN7 [details] [associations]
symbol:CCNT1 "Cyclin-T1" species:9598 "Pan troglodytes"
[GO:0008024 "positive transcription elongation factor complex b"
evidence=ISS] InterPro:IPR015429 GO:GO:0019048 GO:GO:0000079
GO:GO:0051301 GO:GO:0006355 GO:GO:0003677 GO:GO:0006468
GO:GO:0006351 GO:GO:0003682 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0017069 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 CTD:904 GeneTree:ENSGT00690000102036
HOGENOM:HOG000013208 HOVERGEN:HBG050843 KO:K15188 OMA:ANVKSQY
OrthoDB:EOG41NTKJ GO:GO:0008024 EMBL:AF520776 RefSeq:NP_001009054.1
UniGene:Ptr.6410 ProteinModelPortal:Q8HXN7 SMR:Q8HXN7 STRING:Q8HXN7
PRIDE:Q8HXN7 Ensembl:ENSPTRT00000009038 GeneID:450146
KEGG:ptr:450146 InParanoid:Q8HXN7 NextBio:20833108 Uniprot:Q8HXN7
Length = 725
Score = 164 (62.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 45/170 (26%), Positives = 83/170 (48%)
Query: 82 SLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAE 141
S R + + +++ Q + V Q + TA+ YM R Y +S T++ + VAP L+LA+K E
Sbjct: 35 SYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVE 94
Query: 142 ESTVQARLLV------FYIKKIYSD---EKYRYEVKDILEMEMKILEALNYYLVVFHPYR 192
E + ++ + ++ D E Y +V+D++ +E IL+ L + L + HP+
Sbjct: 95 EQPKKLEHVIKVAHTCLHPQESLPDTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHT 154
Query: 193 SLVQFLQDA-GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
+V+ Q D+ T N + L + P ++A CI++A
Sbjct: 155 HVVKCTQLVRASKDLAQTSYFMAT-NSLHLTTFSLQYTPPVVACVCIHLA 203
>UNIPROTKB|F1MG12 [details] [associations]
symbol:CCNH "Cyclin-H" species:9913 "Bos taurus"
[GO:0070985 "TFIIK complex" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 IPI:IPI00689727
UniGene:Bt.177 OMA:EILATCV EMBL:DAAA02021165 EMBL:DAAA02021166
Ensembl:ENSBTAT00000035017 Uniprot:F1MG12
Length = 320
Score = 158 (60.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 47/149 (31%), Positives = 73/149 (48%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 79 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK 138
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGM------NDINMTHLSWGIL 216
++ ILE E+ +++ LN++L+V +PYR FL D N + + L
Sbjct: 139 ---ALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPLLENPEILRKTADDFL 195
Query: 217 NDTYKMDLILVHPPHLIALACIYIASVYR 245
N D L++ P IAL I ++S R
Sbjct: 196 NRVALTDAHLLYTPSQIALTAI-LSSASR 223
>UNIPROTKB|Q3ZBL9 [details] [associations]
symbol:CCNH "Cyclin-H" species:9913 "Bos taurus"
[GO:0006468 "protein phosphorylation" evidence=ISS] [GO:0005675
"holo TFIIH complex" evidence=ISS] [GO:0008353 "RNA polymerase II
carboxy-terminal domain kinase activity" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004672 "protein kinase activity" evidence=ISS] [GO:0007049
"cell cycle" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0070985 "TFIIK
complex" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 GO:GO:0006468 GO:GO:0007049
GO:GO:0006366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026 KO:K06634
GO:GO:0005675 PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569
EMBL:BC103224 IPI:IPI00689727 RefSeq:NP_001073256.1 UniGene:Bt.177
ProteinModelPortal:Q3ZBL9 SMR:Q3ZBL9 STRING:Q3ZBL9 GeneID:615512
KEGG:bta:615512 CTD:902 HOGENOM:HOG000232149 HOVERGEN:HBG050840
InParanoid:Q3ZBL9 OrthoDB:EOG47SSF4 NextBio:20899653 Uniprot:Q3ZBL9
Length = 320
Score = 158 (60.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 47/149 (31%), Positives = 73/149 (48%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 79 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK 138
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGM------NDINMTHLSWGIL 216
++ ILE E+ +++ LN++L+V +PYR FL D N + + L
Sbjct: 139 ---TLEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPLLENPEILRKTADDFL 195
Query: 217 NDTYKMDLILVHPPHLIALACIYIASVYR 245
N D L++ P IAL I ++S R
Sbjct: 196 NRVALTDAHLLYTPSQIALTAI-LSSASR 223
>UNIPROTKB|E2QYZ5 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GO:GO:0005675 PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 EMBL:AAEX03002082 Ensembl:ENSCAFT00000013308
Uniprot:E2QYZ5
Length = 326
Score = 158 (60.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 47/149 (31%), Positives = 74/149 (49%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
V+ TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 82 VLGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK 141
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAG-----MNDINMTHLSWG-IL 216
++ ILE E+ +++ LN++L+V +PYR FL D M + M + L
Sbjct: 142 ---ALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPMMENPEMLRKTADDFL 198
Query: 217 NDTYKMDLILVHPPHLIALACIYIASVYR 245
N D L++ P IAL I ++S R
Sbjct: 199 NRIALTDAYLLYTPSQIALTAI-LSSASR 226
>UNIPROTKB|Q6T8E9 [details] [associations]
symbol:CCNT1 "Cyclin-T1" species:9913 "Bos taurus"
[GO:0008024 "positive transcription elongation factor complex b"
evidence=ISS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0017069 "snRNA binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0019048 GO:GO:0000079
GO:GO:0051301 GO:GO:0006355 GO:GO:0003677 GO:GO:0006468
GO:GO:0006351 GO:GO:0003682 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0017069 eggNOG:COG5333 PANTHER:PTHR10026
EMBL:AY428555 IPI:IPI00713491 RefSeq:NP_001001147.1
UniGene:Bt.47956 ProteinModelPortal:Q6T8E9 SMR:Q6T8E9 STRING:Q6T8E9
PRIDE:Q6T8E9 Ensembl:ENSBTAT00000007703 GeneID:407194
KEGG:bta:407194 CTD:904 GeneTree:ENSGT00690000102036
HOGENOM:HOG000013208 HOVERGEN:HBG050843 InParanoid:Q6T8E9 KO:K15188
OMA:ANVKSQY OrthoDB:EOG41NTKJ NextBio:20818445 ArrayExpress:Q6T8E9
GO:GO:0008024 Uniprot:Q6T8E9
Length = 727
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 50/205 (24%), Positives = 92/205 (44%)
Query: 47 ISGHRRTTNSFWTKKTWMWRNLLTEKRASLLKITSSLRCRCPTIYRNLAQHVKVRQRVVA 106
+ G R+ N W N + + S R + + +++ Q + V Q +
Sbjct: 1 MEGERKNNNKRWYFTREQLENSPSRRFGLDPDKELSNRQQAANLLQDMGQRLNVSQLTIN 60
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLV------FYIKKIYSD 160
TA+ YM R Y +S T++ + VAP L+LA+K EE + ++ + ++ D
Sbjct: 61 TAIVYMHRFYMIQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD 120
Query: 161 ---EKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDA-GMNDINMTHLSWGIL 216
E Y +V+D++ +E IL+ L + L + HP+ +V+ Q D+ T
Sbjct: 121 TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMAT- 179
Query: 217 NDTYKMDLILVHPPHLIALACIYIA 241
N + L + P ++A CI++A
Sbjct: 180 NSLHLTTFSLQYTPPVVACVCIHLA 204
>UNIPROTKB|F1MIJ6 [details] [associations]
symbol:CCNL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR004367 InterPro:IPR015429
InterPro:IPR017060 Pfam:PF02984 PIRSF:PIRSF036580 GO:GO:0005634
GO:GO:0000079 GO:GO:0006355 GO:GO:0006396 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
CTD:81669 OMA:TGHRYER EMBL:DAAA02043237 IPI:IPI00698735
RefSeq:NP_001029822.2 UniGene:Bt.39199 Ensembl:ENSBTAT00000006407
GeneID:538796 KEGG:bta:538796 NextBio:20877586 ArrayExpress:F1MIJ6
Uniprot:F1MIJ6
Length = 520
Score = 161 (61.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 45/159 (28%), Positives = 83/159 (52%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFYI- 154
+++ Q +AT +R + KS ++ V+ C++LASK EE+ + R + VF+
Sbjct: 91 LRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRL 150
Query: 155 ------KK---IYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
KK + D+ Y I++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 151 RHLREKKKPVPLLLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 210
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N ++ SW +ND+ + D+ + P IA ACIY+A+
Sbjct: 211 NQ-HLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAA 248
>UNIPROTKB|Q96S94 [details] [associations]
symbol:CCNL2 "Cyclin-L2" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR004367 InterPro:IPR015429 InterPro:IPR017060
Pfam:PF02984 PIRSF:PIRSF036580 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 GO:GO:0016607 GO:GO:0006351 GO:GO:0006396
EMBL:CH471183 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
EMBL:AL391244 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
CTD:81669 HOVERGEN:HBG056044 OrthoDB:EOG4ZPDVD EMBL:AY037150
EMBL:AY116620 EMBL:AK074112 EMBL:AK027770 EMBL:AK292268
EMBL:CR628411 EMBL:BC016333 EMBL:BC071622 EMBL:AL834432
EMBL:AL834441 EMBL:AF087903 IPI:IPI00066458 IPI:IPI00478642
IPI:IPI00787908 RefSeq:NP_001034666.1 RefSeq:NP_112199.2
UniGene:Hs.515704 ProteinModelPortal:Q96S94 SMR:Q96S94
STRING:Q96S94 PhosphoSite:Q96S94 DMDM:74752124 PaxDb:Q96S94
PRIDE:Q96S94 Ensembl:ENST00000400809 Ensembl:ENST00000408918
Ensembl:ENST00000408952 Ensembl:ENST00000488340 GeneID:81669
KEGG:hsa:81669 UCSC:uc001aff.1 UCSC:uc021oep.1
GeneCards:GC01M001321 HGNC:HGNC:20570 MIM:613482 neXtProt:NX_Q96S94
PharmGKB:PA134973681 InParanoid:Q96S94 OMA:TGHRYER ChiTaRS:CCNL2
GenomeRNAi:81669 NextBio:72022 ArrayExpress:Q96S94 Bgee:Q96S94
CleanEx:HS_CCNL2 Genevestigator:Q96S94 GermOnline:ENSG00000116148
Uniprot:Q96S94
Length = 520
Score = 161 (61.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 45/159 (28%), Positives = 83/159 (52%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFYI- 154
+++ Q +AT +R + KS ++ V+ C++LASK EE+ + R + VF+
Sbjct: 92 LRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRL 151
Query: 155 ------KK---IYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
KK + D+ Y I++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 152 RQLRDKKKPVPLLLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 211
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N ++ SW +ND+ + D+ + P IA ACIY+A+
Sbjct: 212 NQ-HLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAA 249
>UNIPROTKB|E2R4K2 [details] [associations]
symbol:CCNL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR004367 InterPro:IPR015429
InterPro:IPR017060 Pfam:PF02984 PIRSF:PIRSF036580 GO:GO:0005634
GO:GO:0000079 GO:GO:0006355 GO:GO:0006396 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
CTD:81669 OMA:TGHRYER EMBL:AAEX03003846 RefSeq:XP_848553.1
Ensembl:ENSCAFT00000036293 GeneID:479570 KEGG:cfa:479570
Uniprot:E2R4K2
Length = 523
Score = 161 (61.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 45/159 (28%), Positives = 83/159 (52%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFYI- 154
+++ Q +AT +R + KS ++ V+ C++LASK EE+ + R + VF+
Sbjct: 94 LRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRL 153
Query: 155 ------KK---IYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
KK + D+ Y I++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 154 RHLREKKKPVPLLLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 213
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N ++ SW +ND+ + D+ + P IA ACIY+A+
Sbjct: 214 NQ-HLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAA 251
>UNIPROTKB|K7GNA8 [details] [associations]
symbol:LOC100520599 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 EMBL:FP102397
Ensembl:ENSSSCT00000034383 Uniprot:K7GNA8
Length = 190
Score = 139 (54.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 44/154 (28%), Positives = 77/154 (50%)
Query: 105 VATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS----- 159
VATA + + ++ YDP+LVA + LYLA K EE ++ R ++ + +
Sbjct: 10 VATACAIYHKFFCEIALDAYDPYLVAMSSLYLAGKVEEQHLRTRDIINVSNRYFHPGSEP 69
Query: 160 ---DEKYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINM-----TH 210
D ++ +E++D I++ E+ +L L + + HP++ L+ +L N +N T
Sbjct: 70 LELDSRF-WELRDSIVQCELLVLRVLRFQVSFQHPHKYLLHYLLSL-KNWLNRHSWQRTP 127
Query: 211 LS---WGILNDTYKMDLILVHPPHLIALACIYIA 241
+S W +L D+Y L L IA A +Y+A
Sbjct: 128 VSVTAWALLRDSYHGGLCLRFRAQHIAAAVLYLA 161
>MGI|MGI:1927119 [details] [associations]
symbol:Ccnl2 "cyclin L2" species:10090 "Mus musculus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0019901 "protein
kinase binding" evidence=IEA] InterPro:IPR004367 InterPro:IPR015429
InterPro:IPR017060 Pfam:PF02984 PIRSF:PIRSF036580 MGI:MGI:1927119
GO:GO:0000079 GO:GO:0006355 GO:GO:0016607 GO:GO:0006351
GO:GO:0006396 EMBL:AL670236 EMBL:CH466594 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 CTD:81669 HOVERGEN:HBG056044
OrthoDB:EOG4ZPDVD OMA:TGHRYER ChiTaRS:CCNL2 EMBL:AF211859
EMBL:AY337018 EMBL:AB041605 EMBL:AK007552 EMBL:AK029033
EMBL:AK048244 EMBL:AK156037 EMBL:AK169857 EMBL:BC003773
EMBL:BC023747 EMBL:BC083055 EMBL:BC132295 EMBL:U37351
IPI:IPI00310772 IPI:IPI00410923 IPI:IPI00655111 RefSeq:NP_997561.1
UniGene:Mm.23492 ProteinModelPortal:Q9JJA7 SMR:Q9JJA7 STRING:Q9JJA7
PhosphoSite:Q9JJA7 PaxDb:Q9JJA7 PRIDE:Q9JJA7
Ensembl:ENSMUST00000030944 GeneID:56036 KEGG:mmu:56036
UCSC:uc008wev.1 UCSC:uc008wew.1 InParanoid:A2AD95 NextBio:311796
Bgee:Q9JJA7 CleanEx:MM_CCNL2 Genevestigator:Q9JJA7
GermOnline:ENSMUSG00000029068 Uniprot:Q9JJA7
Length = 518
Score = 160 (61.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 44/159 (27%), Positives = 84/159 (52%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFYI- 154
+++ Q +AT +R + KS ++ V+ C++LASK EE+ + R + VF+
Sbjct: 90 LRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRL 149
Query: 155 ------KK---IYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
KK + D++Y I++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 150 RHLREKKKPVPLVLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 209
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N ++ +W +ND+ + D+ + P IA ACIY+A+
Sbjct: 210 NQ-HLVQTAWNYMNDSLRTDVFVRFQPESIACACIYLAA 247
>RGD|1309149 [details] [associations]
symbol:Ccnl2 "cyclin L2" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR004367 InterPro:IPR015429 InterPro:IPR017060
Pfam:PF02984 PIRSF:PIRSF036580 RGD:1309149 GO:GO:0000079
GO:GO:0006355 GO:GO:0016607 GO:GO:0006351 GO:GO:0006396
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
CTD:81669 HOGENOM:HOG000231292 HOVERGEN:HBG056044 OrthoDB:EOG4ZPDVD
OMA:TGHRYER EMBL:AABR03040241 EMBL:BC088316 IPI:IPI00195442
IPI:IPI00655339 RefSeq:NP_001013112.1 UniGene:Rn.43669
ProteinModelPortal:Q5I0H5 STRING:Q5I0H5 PRIDE:Q5I0H5
Ensembl:ENSRNOT00000025531 Ensembl:ENSRNOT00000066894 GeneID:298686
KEGG:rno:298686 InParanoid:Q5I0H5 NextBio:644178
ArrayExpress:Q5I0H5 Genevestigator:Q5I0H5
GermOnline:ENSRNOG00000018691 Uniprot:Q5I0H5
Length = 520
Score = 160 (61.4 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 44/159 (27%), Positives = 84/159 (52%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFYI- 154
+++ Q +AT +R + KS ++ V+ C++LASK EE+ + R + VF+
Sbjct: 90 LRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRL 149
Query: 155 ------KK---IYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
KK + D++Y I++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 150 RHLREKKKPVPLVLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 209
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N ++ +W +ND+ + D+ + P IA ACIY+A+
Sbjct: 210 NQ-HLVQTAWNYMNDSLRTDVFVRFQPESIACACIYLAA 247
>UNIPROTKB|Q5I0H5 [details] [associations]
symbol:Ccnl2 "Cyclin-L2" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR004367 InterPro:IPR015429
InterPro:IPR017060 Pfam:PF02984 PIRSF:PIRSF036580 RGD:1309149
GO:GO:0000079 GO:GO:0006355 GO:GO:0016607 GO:GO:0006351
GO:GO:0006396 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 CTD:81669 HOGENOM:HOG000231292
HOVERGEN:HBG056044 OrthoDB:EOG4ZPDVD OMA:TGHRYER EMBL:AABR03040241
EMBL:BC088316 IPI:IPI00195442 IPI:IPI00655339 RefSeq:NP_001013112.1
UniGene:Rn.43669 ProteinModelPortal:Q5I0H5 STRING:Q5I0H5
PRIDE:Q5I0H5 Ensembl:ENSRNOT00000025531 Ensembl:ENSRNOT00000066894
GeneID:298686 KEGG:rno:298686 InParanoid:Q5I0H5 NextBio:644178
ArrayExpress:Q5I0H5 Genevestigator:Q5I0H5
GermOnline:ENSRNOG00000018691 Uniprot:Q5I0H5
Length = 520
Score = 160 (61.4 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 44/159 (27%), Positives = 84/159 (52%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFYI- 154
+++ Q +AT +R + KS ++ V+ C++LASK EE+ + R + VF+
Sbjct: 90 LRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRL 149
Query: 155 ------KK---IYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
KK + D++Y I++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 150 RHLREKKKPVPLVLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 209
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N ++ +W +ND+ + D+ + P IA ACIY+A+
Sbjct: 210 NQ-HLVQTAWNYMNDSLRTDVFVRFQPESIACACIYLAA 247
>UNIPROTKB|C9K506 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0008353 "RNA polymerase II carboxy-terminal domain kinase
activity" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0000079 "regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0045944 GO:GO:0006366
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0008353
eggNOG:COG5333 PANTHER:PTHR10026 KO:K06634 GO:GO:0005675
PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 CTD:902 OrthoDB:EOG47SSF4 OMA:EILATCV
GO:GO:0019907 GO:GO:0008094 EMBL:FP340351 EMBL:AB499892
RefSeq:NP_001159785.1 UniGene:Ssc.11994 STRING:C9K506
Ensembl:ENSSSCT00000015451 GeneID:100310796 KEGG:ssc:100310796
Uniprot:C9K506
Length = 323
Score = 155 (59.6 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 35/98 (35%), Positives = 55/98 (56%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 79 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK 138
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQD 200
++ ILE E+ +++ LN++L+V +PYR FL D
Sbjct: 139 ---ALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLID 173
>RGD|69419 [details] [associations]
symbol:Ccnh "cyclin H" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005675
"holo TFIIH complex" evidence=ISO;ISS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0006468
"protein phosphorylation" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008353 "RNA polymerase II carboxy-terminal
domain kinase activity" evidence=ISO;ISS] [GO:0016301 "kinase
activity" evidence=ISO] [GO:0016310 "phosphorylation" evidence=ISO]
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0070985 "TFIIK complex"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 RGD:69419 GO:GO:0000079
GO:GO:0045944 GO:GO:0007049 GO:GO:0006366 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0008353 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 CTD:902
HOGENOM:HOG000232149 HOVERGEN:HBG050840 OrthoDB:EOG47SSF4
OMA:EILATCV GO:GO:0019907 GO:GO:0008094 EMBL:AF154914 EMBL:AJ276495
EMBL:BC059109 IPI:IPI00326558 RefSeq:NP_443213.2 UniGene:Rn.23255
ProteinModelPortal:Q9R1A0 SMR:Q9R1A0 STRING:Q9R1A0 PRIDE:Q9R1A0
Ensembl:ENSRNOT00000049423 GeneID:84389 KEGG:rno:84389
UCSC:RGD:69419 InParanoid:Q9R1A0 NextBio:616747
Genevestigator:Q9R1A0 GermOnline:ENSRNOG00000031656 Uniprot:Q9R1A0
Length = 323
Score = 155 (59.6 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 35/98 (35%), Positives = 55/98 (56%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 79 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK 138
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQD 200
++ ILE E+ +++ LN++L+V +PYR FL D
Sbjct: 139 ---ALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLID 173
>MGI|MGI:1913921 [details] [associations]
symbol:Ccnh "cyclin H" species:10090 "Mus musculus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005675 "holo
TFIIH complex" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006468 "protein phosphorylation" evidence=ISO;ISS] [GO:0007049
"cell cycle" evidence=ISS] [GO:0016301 "kinase activity"
evidence=IDA] [GO:0016310 "phosphorylation" evidence=IDA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 MGI:MGI:1913921 GO:GO:0000079 GO:GO:0045944
GO:GO:0006366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0004693 GO:GO:0008353 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 CTD:902
HOVERGEN:HBG050840 OrthoDB:EOG47SSF4 GO:GO:0019907 EMBL:AF287135
EMBL:AK007910 EMBL:AK078059 EMBL:BC038861 EMBL:X82441
IPI:IPI00752728 PIR:S48862 RefSeq:NP_075732.1 UniGene:Mm.18474
ProteinModelPortal:Q61458 SMR:Q61458 STRING:Q61458
PhosphoSite:Q61458 PaxDb:Q61458 PRIDE:Q61458
Ensembl:ENSMUST00000022030 GeneID:66671 KEGG:mmu:66671
UCSC:uc007riu.1 InParanoid:Q61458 NextBio:322333 Bgee:Q61458
CleanEx:MM_CCNH Genevestigator:Q61458 GermOnline:ENSMUSG00000021548
GO:GO:0008094 Uniprot:Q61458
Length = 323
Score = 154 (59.3 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 34/97 (35%), Positives = 54/97 (55%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKY 163
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ ++
Sbjct: 79 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQER 138
Query: 164 RYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQD 200
E ILE E+ +++ LN++L+V +PYR FL D
Sbjct: 139 ALE--QILEYELLLIQQLNFHLIVHNPYRPFEGFLID 173
>UNIPROTKB|C9JPL0 [details] [associations]
symbol:CCNL1 "Cyclin-L1" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR004367 InterPro:IPR015429 InterPro:IPR015431
InterPro:IPR017060 Pfam:PF02984 PIRSF:PIRSF036580 GO:GO:0005634
GO:GO:0000079 GO:GO:0006355 GO:GO:0006396 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 HOGENOM:HOG000231292
OrthoDB:EOG4ZPDVD PANTHER:PTHR10026:SF2 HGNC:HGNC:20569
EMBL:AC104411 IPI:IPI00791836 ProteinModelPortal:C9JPL0 SMR:C9JPL0
STRING:C9JPL0 Ensembl:ENST00000461804 UCSC:uc003fbd.1
ArrayExpress:C9JPL0 Bgee:C9JPL0 Uniprot:C9JPL0
Length = 428
Score = 156 (60.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 41/159 (25%), Positives = 82/159 (51%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT R + KS ++ +VA C+ LASK EE+ + R + VF+ +
Sbjct: 97 LRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHL 156
Query: 155 KKIYS---------DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
+++ D+ Y +++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 157 RQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 216
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N + +W +ND+ + ++ + P IA ACIY+A+
Sbjct: 217 NQ-TLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAA 254
>UNIPROTKB|G3V5E1 [details] [associations]
symbol:CCNK "Cyclin-K" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 EMBL:AL110504 PANTHER:PTHR10026 HGNC:HGNC:1596
ChiTaRS:CCNK ProteinModelPortal:G3V5E1 SMR:G3V5E1 PRIDE:G3V5E1
Ensembl:ENST00000555049 ArrayExpress:G3V5E1 Bgee:G3V5E1
Uniprot:G3V5E1
Length = 378
Score = 155 (59.6 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 46/196 (23%), Positives = 95/196 (48%)
Query: 59 TKKTWMW--RNLL-TEKRASLLKITSSLRCR---CPTIYRNLAQHVKVRQRVVATAVTYM 112
TK W W ++L T + L + R R I+ ++ + + +AT + Y
Sbjct: 20 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIF-DVGTRLGLHYDTLATGIIYF 78
Query: 113 RRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY---EVKD 169
R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++ + K+
Sbjct: 79 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE 138
Query: 170 -ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYKMDLI 225
++ +E +L+ + + L V HPY+ L+++ + N I + ++W +ND+ L
Sbjct: 139 EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLS 198
Query: 226 LVHPPHLIALACIYIA 241
L P +IA+A +Y+A
Sbjct: 199 LQWEPEIIAVAVMYLA 214
>WB|WBGene00009650 [details] [associations]
symbol:ccnk-1 species:6239 "Caenorhabditis elegans"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR015429 GO:GO:0008340 GO:GO:0002009 GO:GO:0006898
GO:GO:0040010 GO:GO:0000079 GO:GO:0006355 GO:GO:0040011
GO:GO:0006974 GO:GO:0040035 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG5333 PANTHER:PTHR10026 HOGENOM:HOG000220828
GeneTree:ENSGT00690000102036 EMBL:Z83226 PIR:T22123
RefSeq:NP_506615.2 UniGene:Cel.26816 ProteinModelPortal:O17869
SMR:O17869 STRING:O17869 PaxDb:O17869 EnsemblMetazoa:F43D2.1
GeneID:185704 KEGG:cel:CELE_F43D2.1 UCSC:F43D2.1 CTD:185704
WormBase:F43D2.1 InParanoid:O17869 OMA:QMIAIAL NextBio:929208
Uniprot:O17869
Length = 252
Score = 150 (57.9 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 63 WMW--RNLLTEK--RASLLKITSSL-RCRCPTIYRNLAQHVKVRQR-VVATAVTYMRRCY 116
W+W L T RA L K L R + + + + R + A Y R Y
Sbjct: 4 WIWPLEALKTTPSIRAGLTKEQELLWRREGIKLLSEVGNALNCKPRPTIGVAAVYFHRFY 63
Query: 117 TRKSMTEYDPHLVAPTCLYLASKAEESTVQAR----LLVFYIKKIYSDEKYRYEVKDILE 172
S + + A +CL+LA K E+ + + V + +IYS KY+ V D++
Sbjct: 64 MIHSFQSFSREVTALSCLFLAGKVEDFPKKCKDVCQAAVTHYPEIYS--KYQNLVDDVMG 121
Query: 173 MEMKILEALNYYLVVFHPYRSLVQF-LQDAGMNDINMT---HLSWGILNDTYKMDLILVH 228
+E +L +L + L V PY +L+ + + MN +T ++W +ND+ L +
Sbjct: 122 LERVLLHSLKFDLHVALPYDALLDYKMMFPDMNREKITDAVQIAWTFINDSIYTTLCITT 181
Query: 229 PPHLIALACIYIA 241
P +IA+A +++A
Sbjct: 182 EPQMIAIALLHLA 194
>FB|FBgn0025674 [details] [associations]
symbol:CycK "Cyclin K" species:7227 "Drosophila melanogaster"
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=ISS] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0000079 "regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR015429
GO:GO:0000079 EMBL:AE014134 GO:GO:0022008 GO:GO:0006355
GO:GO:0016740 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG5333 PANTHER:PTHR10026 GeneTree:ENSGT00690000102036
OMA:GHNTMAT EMBL:AY051667 RefSeq:NP_788082.1 RefSeq:NP_788083.1
UniGene:Dm.1735 SMR:Q961D1 IntAct:Q961D1 MINT:MINT-290019
STRING:Q961D1 EnsemblMetazoa:FBtr0085941 EnsemblMetazoa:FBtr0085942
GeneID:49816 KEGG:dme:Dmel_CG15218 UCSC:CG15218-RA CTD:49816
FlyBase:FBgn0025674 InParanoid:Q961D1 OrthoDB:EOG44TMQB
GenomeRNAi:49816 NextBio:839916 Uniprot:Q961D1
Length = 400
Score = 155 (59.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 105 VATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYR 164
+AT V Y R Y S + ++ A CL+ A K EE+ + R ++ + I +D Y
Sbjct: 51 MATGVVYFHRFYMFHSFRSFPRYVTACCCLFFAGKVEETPKKCRDIIKTARGILTDN-YF 109
Query: 165 YEVKD-----ILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGMNDIN-MTHLSWGIL 216
Y D ++ +E +L+ + + L V HPY L+++ + + M ++W +
Sbjct: 110 YSFGDDPKEEVMTLERILLQTIKFDLQVEHPYTFLLKYAKCFKGDQQKLQKMVQMAWNFV 169
Query: 217 NDTYKMDLILVHPPHLIALACIYIAS 242
ND+ + L P +IA+A I++AS
Sbjct: 170 NDSLSTVVCLQWEPEIIAVALIHLAS 195
>ZFIN|ZDB-GENE-030131-6397 [details] [associations]
symbol:ccnt1 "cyclin T1" species:7955 "Danio
rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] InterPro:IPR015429
ZFIN:ZDB-GENE-030131-6397 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
HOGENOM:HOG000013208 HOVERGEN:HBG050843 EMBL:BC057477
IPI:IPI00512760 UniGene:Dr.80166 ProteinModelPortal:Q6PFP0
STRING:Q6PFP0 PRIDE:Q6PFP0 InParanoid:Q6PFP0 ArrayExpress:Q6PFP0
Bgee:Q6PFP0 Uniprot:Q6PFP0
Length = 683
Score = 158 (60.7 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 45/173 (26%), Positives = 81/173 (46%)
Query: 82 SLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAE 141
S R + + +++ Q + V Q + TA+ YM R Y +S T + ++AP L+LA+K E
Sbjct: 48 SYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMVQSFTRFHRDVIAPAALFLAAKVE 107
Query: 142 ESTVQARLLVFYIKKIYS------------DEKYRYEVKDILEMEMKILEALNYYLVVFH 189
E Q R L IK ++ + Y + +D++ +E IL+ L + + + H
Sbjct: 108 E---QPRKLEHVIKVTHACLNPQDPSPDTRSDTYLQQAQDLVILESIILQTLGFEITIDH 164
Query: 190 PYRSLVQFLQDA-GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
P+ +V+ Q D+ T N + L + P ++A CI++A
Sbjct: 165 PHTHVVKCTQLVRASKDLAQTSYFMAT-NSLHLTTFCLQYSPPIVACVCIHLA 216
>DICTYBASE|DDB_G0268668 [details] [associations]
symbol:cycH "putative H-type cyclin" species:44689
"Dictyostelium discoideum" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR015429 dictyBase:DDB_G0268668
GO:GO:0005634 GO:GO:0000079 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0006351 EMBL:AAFI02000004 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 eggNOG:COG5333 PANTHER:PTHR10026 HSSP:P51946
KO:K06634 RefSeq:XP_646851.1 ProteinModelPortal:Q55F19
STRING:Q55F19 EnsemblProtists:DDB0231776 GeneID:8616534
KEGG:ddi:DDB_G0268668 InParanoid:Q55F19 OMA:CKTEDNH Uniprot:Q55F19
Length = 286
Score = 151 (58.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 46/159 (28%), Positives = 79/159 (49%)
Query: 94 LAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFY 153
+A + + +V A A+ Y++R Y + S+ +Y LV +CL++A K E++ L + Y
Sbjct: 65 IAMALNLPDKVSAPAIIYIKRFYLKNSIMQYGAKLVMLSCLFIACKTEDN----HLDIDY 120
Query: 154 IKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDI--NMTH- 210
I + DI +E+ ILE+LN+ L+V+HP+R + ++ D N N T+
Sbjct: 121 YSNIT-----KASPSDITNLEIIILESLNFNLIVYHPFRPMYGYILDINDNSAIYNNTNG 175
Query: 211 ---LSWGILNDTYKM--------DLILVHPPHLIALACI 238
+ + L +T K D P +IALAC+
Sbjct: 176 VSPIKFDTLWETCKKSIQKSLFSDCCFEFHPQIIALACL 214
>UNIPROTKB|E1BJ67 [details] [associations]
symbol:CCNL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0000079
"regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR015429 InterPro:IPR015431
InterPro:IPR017060 PIRSF:PIRSF036580 GO:GO:0000079 GO:GO:0006355
GO:GO:0006396 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
PANTHER:PTHR10026:SF2 CTD:57018 OMA:CELIQSA EMBL:DAAA02002508
IPI:IPI00692762 RefSeq:NP_001193240.1 UniGene:Bt.53231
Ensembl:ENSBTAT00000005025 GeneID:514613 KEGG:bta:514613
NextBio:20871425 Uniprot:E1BJ67
Length = 526
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/159 (25%), Positives = 82/159 (51%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT R + KS ++ +VA C+ LASK EE+ + R + VF+ +
Sbjct: 97 LRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHL 156
Query: 155 KKIYS---------DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
+++ D+ Y +++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 157 RQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 216
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N + +W +ND+ + ++ + P IA ACIY+A+
Sbjct: 217 NQ-TLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAA 254
>UNIPROTKB|Q9UK58 [details] [associations]
symbol:CCNL1 "Cyclin-L1" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR015429 InterPro:IPR015431 InterPro:IPR017060
PIRSF:PIRSF036580 GO:GO:0000079 GO:GO:0006355 GO:GO:0016607
EMBL:CH471052 GO:GO:0006351 GO:GO:0006396 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
HOVERGEN:HBG056044 OrthoDB:EOG4ZPDVD PANTHER:PTHR10026:SF2
EMBL:AF180920 EMBL:AK022974 EMBL:AF367476 EMBL:AF367477
EMBL:AY034790 EMBL:BC007081 EMBL:BC038394 EMBL:BC067812
EMBL:AF208843 EMBL:AY358663 IPI:IPI00186287 IPI:IPI00654682
IPI:IPI00654772 RefSeq:NP_064703.1 UniGene:Hs.4859
ProteinModelPortal:Q9UK58 SMR:Q9UK58 IntAct:Q9UK58 STRING:Q9UK58
PhosphoSite:Q9UK58 DMDM:74753368 PaxDb:Q9UK58 PRIDE:Q9UK58
Ensembl:ENST00000295925 Ensembl:ENST00000295926
Ensembl:ENST00000465947 Ensembl:ENST00000470121
Ensembl:ENST00000475298 Ensembl:ENST00000477127 GeneID:57018
KEGG:hsa:57018 UCSC:uc003fbe.3 CTD:57018 GeneCards:GC03M156864
HGNC:HGNC:20569 HPA:HPA034752 MIM:613384 neXtProt:NX_Q9UK58
PharmGKB:PA134980948 InParanoid:Q9UK58 OMA:CELIQSA PhylomeDB:Q9UK58
GenomeRNAi:57018 NextBio:62766 ArrayExpress:Q9UK58 Bgee:Q9UK58
CleanEx:HS_CCNL1 Genevestigator:Q9UK58 GermOnline:ENSG00000163660
Uniprot:Q9UK58
Length = 526
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/159 (25%), Positives = 82/159 (51%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT R + KS ++ +VA C+ LASK EE+ + R + VF+ +
Sbjct: 97 LRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHL 156
Query: 155 KKIYS---------DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
+++ D+ Y +++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 157 RQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 216
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N + +W +ND+ + ++ + P IA ACIY+A+
Sbjct: 217 NQ-TLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAA 254
>UNIPROTKB|I3LG02 [details] [associations]
symbol:CCNL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0000079
"regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR015429 InterPro:IPR015431
InterPro:IPR017060 PIRSF:PIRSF036580 GO:GO:0000079 GO:GO:0006355
GO:GO:0006396 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
PANTHER:PTHR10026:SF2 CTD:57018 OMA:CELIQSA EMBL:FP325237
RefSeq:XP_003358677.1 Ensembl:ENSSSCT00000026182 GeneID:100626293
KEGG:ssc:100626293 Uniprot:I3LG02
Length = 526
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/159 (25%), Positives = 82/159 (51%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT R + KS ++ +VA C+ LASK EE+ + R + VF+ +
Sbjct: 97 LRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHL 156
Query: 155 KKIYS---------DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
+++ D+ Y +++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 157 RQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 216
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N + +W +ND+ + ++ + P IA ACIY+A+
Sbjct: 217 NQ-TLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAA 254
>RGD|620864 [details] [associations]
symbol:Ccnl1 "cyclin L1" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA;NAS]
[GO:0016607 "nuclear speck" evidence=IDA] [GO:0019901 "protein
kinase binding" evidence=IEA] InterPro:IPR015429 InterPro:IPR015431
InterPro:IPR017060 PIRSF:PIRSF036580 RGD:620864 GO:GO:0000079
GO:GO:0006355 GO:GO:0016607 GO:GO:0006351 GO:GO:0006396
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
HOGENOM:HOG000231292 HOVERGEN:HBG056044 OrthoDB:EOG4ZPDVD
PANTHER:PTHR10026:SF2 CTD:57018 OMA:CELIQSA EMBL:AF030091
EMBL:BC085686 IPI:IPI00207567 IPI:IPI00392063 RefSeq:NP_446114.1
RefSeq:XP_003749343.1 UniGene:Rn.12962 ProteinModelPortal:Q9R1Q2
STRING:Q9R1Q2 PhosphoSite:Q9R1Q2 Ensembl:ENSRNOT00000016016
Ensembl:ENSRNOT00000034535 GeneID:100909712 GeneID:114121
KEGG:rno:100909712 KEGG:rno:114121 UCSC:RGD:620864
InParanoid:Q9R1Q2 NextBio:618341 ArrayExpress:Q9R1Q2
Genevestigator:Q9R1Q2 GermOnline:ENSRNOG00000011586 Uniprot:Q9R1Q2
Length = 527
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/159 (25%), Positives = 82/159 (51%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT R + KS ++ +VA C+ LASK EE+ + R + VF+ +
Sbjct: 98 LRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHL 157
Query: 155 KKIYS---------DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
+++ D+ Y +++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 158 RQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 217
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N + +W +ND+ + ++ + P IA ACIY+A+
Sbjct: 218 NQ-TLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAA 255
>UNIPROTKB|Q9R1Q2 [details] [associations]
symbol:Ccnl1 "Cyclin-L1" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] InterPro:IPR015429
InterPro:IPR015431 InterPro:IPR017060 PIRSF:PIRSF036580 RGD:620864
GO:GO:0000079 GO:GO:0006355 GO:GO:0016607 GO:GO:0006351
GO:GO:0006396 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 HOGENOM:HOG000231292
HOVERGEN:HBG056044 OrthoDB:EOG4ZPDVD PANTHER:PTHR10026:SF2
CTD:57018 OMA:CELIQSA EMBL:AF030091 EMBL:BC085686 IPI:IPI00207567
IPI:IPI00392063 RefSeq:NP_446114.1 RefSeq:XP_003749343.1
UniGene:Rn.12962 ProteinModelPortal:Q9R1Q2 STRING:Q9R1Q2
PhosphoSite:Q9R1Q2 Ensembl:ENSRNOT00000016016
Ensembl:ENSRNOT00000034535 GeneID:100909712 GeneID:114121
KEGG:rno:100909712 KEGG:rno:114121 UCSC:RGD:620864
InParanoid:Q9R1Q2 NextBio:618341 ArrayExpress:Q9R1Q2
Genevestigator:Q9R1Q2 GermOnline:ENSRNOG00000011586 Uniprot:Q9R1Q2
Length = 527
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/159 (25%), Positives = 82/159 (51%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT R + KS ++ +VA C+ LASK EE+ + R + VF+ +
Sbjct: 98 LRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHL 157
Query: 155 KKIYS---------DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
+++ D+ Y +++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 158 RQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 217
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N + +W +ND+ + ++ + P IA ACIY+A+
Sbjct: 218 NQ-TLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAA 255
>MGI|MGI:1922664 [details] [associations]
symbol:Ccnl1 "cyclin L1" species:10090 "Mus musculus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0008023 "transcription elongation
factor complex" evidence=ISA] [GO:0016607 "nuclear speck"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR015431 InterPro:IPR017060
PIRSF:PIRSF036580 MGI:MGI:1922664 GO:GO:0005737 GO:GO:0000079
GO:GO:0006355 GO:GO:0016607 GO:GO:0006351 GO:GO:0006396
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
HOGENOM:HOG000231292 HOVERGEN:HBG056044 OrthoDB:EOG4ZPDVD
PANTHER:PTHR10026:SF2 CTD:57018 OMA:CELIQSA EMBL:AF159159
EMBL:AF467251 EMBL:AK051380 EMBL:AK011629 EMBL:BC094383
IPI:IPI00336973 IPI:IPI00458291 RefSeq:NP_064321.2
UniGene:Mm.175612 ProteinModelPortal:Q52KE7 SMR:Q52KE7
STRING:Q52KE7 PhosphoSite:Q52KE7 PaxDb:Q52KE7 PRIDE:Q52KE7
Ensembl:ENSMUST00000029416 GeneID:56706 KEGG:mmu:56706
UCSC:uc008pku.1 UCSC:uc008pkx.1 InParanoid:Q52KE7 NextBio:313159
Bgee:Q52KE7 CleanEx:MM_CCNL1 Genevestigator:Q52KE7
GermOnline:ENSMUSG00000027829 GO:GO:0008023 Uniprot:Q52KE7
Length = 532
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/159 (25%), Positives = 82/159 (51%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT R + KS ++ +VA C+ LASK EE+ + R + VF+ +
Sbjct: 103 LRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHL 162
Query: 155 KKIYS---------DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
+++ D+ Y +++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 163 RQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 222
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N + +W +ND+ + ++ + P IA ACIY+A+
Sbjct: 223 NQ-TLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAA 260
>MGI|MGI:1276106 [details] [associations]
symbol:Ccnk "cyclin K" species:10090 "Mus musculus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IMP] [GO:0002944 "cyclin
K-CDK12 complex" evidence=ISO] [GO:0002945 "cyclin K-CDK13 complex"
evidence=ISO] [GO:0004693 "cyclin-dependent protein
serine/threonine kinase activity" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008353 "RNA polymerase II carboxy-terminal
domain kinase activity" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0071157 "negative regulation of cell cycle arrest"
evidence=ISO] InterPro:IPR015429 EMBL:AF060517 MGI:MGI:1276106
GO:GO:0000079 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0001701 GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0004693 GO:GO:0008353 EMBL:AC152059 PROSITE:PS00292
eggNOG:COG5333 PANTHER:PTHR10026 HOVERGEN:HBG050836
HOGENOM:HOG000220828 OrthoDB:EOG4KH2VJ GO:GO:0071157 EMBL:BC027297
IPI:IPI00153134 UniGene:Mm.474441 ProteinModelPortal:O88874
SMR:O88874 STRING:O88874 PhosphoSite:O88874 PaxDb:O88874
PRIDE:O88874 CleanEx:MM_CCNK Genevestigator:O88874
GermOnline:ENSMUSG00000021258 Uniprot:O88874
Length = 554
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/196 (23%), Positives = 95/196 (48%)
Query: 59 TKKTWMW--RNLL-TEKRASLLKITSSLRCR---CPTIYRNLAQHVKVRQRVVATAVTYM 112
TK W W ++L T + L + R R I+ ++ + + +AT + Y
Sbjct: 20 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIF-DVGTRLGLHYDTLATGIIYF 78
Query: 113 RRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY---EVKD 169
R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++ + K+
Sbjct: 79 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE 138
Query: 170 -ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYKMDLI 225
++ +E +L+ + + L V HPY+ L+++ + N I + ++W +ND+ L
Sbjct: 139 EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLS 198
Query: 226 LVHPPHLIALACIYIA 241
L P +IA+A +Y+A
Sbjct: 199 LQWEPEIIAVAVMYLA 214
>RGD|1595690 [details] [associations]
symbol:Ccnk "cyclin K" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0002944 "cyclin
K-CDK12 complex" evidence=ISO] [GO:0002945 "cyclin K-CDK13 complex"
evidence=ISO] [GO:0004693 "cyclin-dependent protein
serine/threonine kinase activity" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0008353 "RNA polymerase II carboxy-terminal domain kinase
activity" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0071157 "negative regulation of cell cycle
arrest" evidence=ISO] InterPro:IPR015429 RGD:1595690 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 EMBL:AC128571 IPI:IPI00368343
Ensembl:ENSRNOT00000009347 UCSC:RGD:1595690 ArrayExpress:D4A3T8
Uniprot:D4A3T8
Length = 554
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/196 (23%), Positives = 95/196 (48%)
Query: 59 TKKTWMW--RNLL-TEKRASLLKITSSLRCR---CPTIYRNLAQHVKVRQRVVATAVTYM 112
TK W W ++L T + L + R R I+ ++ + + +AT + Y
Sbjct: 20 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIF-DVGTRLGLHYDTLATGIIYF 78
Query: 113 RRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY---EVKD 169
R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++ + K+
Sbjct: 79 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE 138
Query: 170 -ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYKMDLI 225
++ +E +L+ + + L V HPY+ L+++ + N I + ++W +ND+ L
Sbjct: 139 EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLS 198
Query: 226 LVHPPHLIALACIYIA 241
L P +IA+A +Y+A
Sbjct: 199 LQWEPEIIAVAVMYLA 214
>UNIPROTKB|E1C948 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008353 "RNA polymerase II carboxy-terminal domain kinase
activity" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0045944 GO:GO:0006366 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0008353 PANTHER:PTHR10026 KO:K06634
GO:GO:0005675 PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 CTD:902 OMA:EILATCV GO:GO:0019907 GO:GO:0008094
EMBL:AADN02047537 IPI:IPI00594378 RefSeq:XP_424908.2
UniGene:Gga.29608 Ensembl:ENSGALT00000025216 GeneID:427328
KEGG:gga:427328 NextBio:20828605 Uniprot:E1C948
Length = 322
Score = 151 (58.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/149 (30%), Positives = 72/149 (48%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKI-YSDEK 162
VV TA Y +R Y S+ EY P ++ TC +LA K +E V + V +++ EK
Sbjct: 79 VVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSAQFVGNLRESPVGQEK 138
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGM------NDINMTHLSWGIL 216
++ ILE E+ +++ LN++L+V +PYR L D N + + L
Sbjct: 139 ---ALEQILEYELLLIQQLNFHLIVHNPYRPFEGILIDLKTRYPLLENPEVLRKTADDFL 195
Query: 217 NDTYKMDLILVHPPHLIALACIYIASVYR 245
+ D L+ P IALA I ++S R
Sbjct: 196 SRVALTDAYLLFTPSQIALAAI-LSSASR 223
>UNIPROTKB|O75909 [details] [associations]
symbol:CCNK "Cyclin-K" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0002944 "cyclin K-CDK12 complex"
evidence=IPI] [GO:0002945 "cyclin K-CDK13 complex" evidence=IPI]
[GO:0004693 "cyclin-dependent protein serine/threonine kinase
activity" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0008353 "RNA polymerase II
carboxy-terminal domain kinase activity" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0071157 "negative
regulation of cell cycle arrest" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR015429 GO:GO:0000079
GO:GO:0051301 GO:GO:0007067 GO:GO:0006355 GO:GO:0006974
GO:GO:0006366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0004693 GO:GO:0008353 EMBL:AL110504 PROSITE:PS00292
eggNOG:COG5333 PANTHER:PTHR10026 HOVERGEN:HBG050836 EMBL:AF060515
EMBL:BT006950 EMBL:AF542236 EMBL:BC015935 EMBL:AH009612
EMBL:BX247958 EMBL:AB209373 IPI:IPI00411579 IPI:IPI00431127
IPI:IPI00783214 IPI:IPI00915260 RefSeq:NP_001092872.1
UniGene:Hs.510409 PDB:2I53 PDBsum:2I53 ProteinModelPortal:O75909
SMR:O75909 IntAct:O75909 MINT:MINT-1437641 STRING:O75909
PhosphoSite:O75909 PaxDb:O75909 PRIDE:O75909 DNASU:8812
Ensembl:ENST00000389879 GeneID:8812 KEGG:hsa:8812 UCSC:uc001ygi.4
CTD:8812 GeneCards:GC14P099947 HGNC:HGNC:1596 HPA:HPA000645
MIM:603544 neXtProt:NX_O75909 PharmGKB:PA26161 HOGENOM:HOG000220828
OrthoDB:EOG4KH2VJ ChiTaRS:CCNK EvolutionaryTrace:O75909
GenomeRNAi:8812 NextBio:33052 ArrayExpress:O75909 Bgee:O75909
CleanEx:HS_CCNK Genevestigator:O75909 GermOnline:ENSG00000090061
GO:GO:0002944 GO:GO:0002945 GO:GO:0071157 Uniprot:O75909
Length = 580
Score = 155 (59.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/196 (23%), Positives = 95/196 (48%)
Query: 59 TKKTWMW--RNLL-TEKRASLLKITSSLRCR---CPTIYRNLAQHVKVRQRVVATAVTYM 112
TK W W ++L T + L + R R I+ ++ + + +AT + Y
Sbjct: 20 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIF-DVGTRLGLHYDTLATGIIYF 78
Query: 113 RRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY---EVKD 169
R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++ + K+
Sbjct: 79 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE 138
Query: 170 -ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYKMDLI 225
++ +E +L+ + + L V HPY+ L+++ + N I + ++W +ND+ L
Sbjct: 139 EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLS 198
Query: 226 LVHPPHLIALACIYIA 241
L P +IA+A +Y+A
Sbjct: 199 LQWEPEIIAVAVMYLA 214
>UNIPROTKB|F1NCA1 [details] [associations]
symbol:CCNK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GeneTree:ENSGT00690000102036
EMBL:AADN02003715 OMA:MSTTNSY IPI:IPI00601824
Ensembl:ENSGALT00000018166 Uniprot:F1NCA1
Length = 587
Score = 155 (59.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/196 (23%), Positives = 95/196 (48%)
Query: 59 TKKTWMW--RNLL-TEKRASLLKITSSLRCR---CPTIYRNLAQHVKVRQRVVATAVTYM 112
TK W W ++L T + L + R R I+ ++ + + +AT + Y
Sbjct: 20 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIF-DVGTRLGLHYDTLATGIIYF 78
Query: 113 RRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY---EVKD 169
R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++ + K+
Sbjct: 79 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE 138
Query: 170 -ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYKMDLI 225
++ +E +L+ + + L V HPY+ L+++ + N I + ++W +ND+ L
Sbjct: 139 EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLS 198
Query: 226 LVHPPHLIALACIYIA 241
L P +IA+A +Y+A
Sbjct: 199 LQWEPEIIAVAVMYLA 214
>DICTYBASE|DDB_G0286617 [details] [associations]
symbol:cycK "putative K-type cyclin" species:44689
"Dictyostelium discoideum" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR004367
InterPro:IPR015429 Pfam:PF02984 dictyBase:DDB_G0286617
GO:GO:0005634 GO:GO:0000079 GenomeReviews:CM000153_GR GO:GO:0006355
EMBL:AAFI02000089 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG5333 PANTHER:PTHR10026 OMA:GHNTMAT RefSeq:XP_637571.1
ProteinModelPortal:Q54LJ0 EnsemblProtists:DDB0231777 GeneID:8625711
KEGG:ddi:DDB_G0286617 InParanoid:Q54LJ0 ProtClustDB:CLSZ2846685
Uniprot:Q54LJ0
Length = 405
Score = 152 (58.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 42/156 (26%), Positives = 77/156 (49%)
Query: 125 DPHLVAPTCLYLASKAEES------TVQARLLVFYIKK------IYSDEKYRYEVKDILE 172
D +VA CL+LA K EE+ ++ ++ KK S +++ IL+
Sbjct: 82 DSPVVATACLFLAGKVEETPRKLDDVIKVSYMIKNKKKDGDKMVAISQQEHNNLKNKILQ 141
Query: 173 MEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHL 232
E IL + + L V HPY+ L+++++ N+ ++W +ND+ + L L +PP L
Sbjct: 142 NEHLILTTIAFELAVEHPYKYLLEYMKSI-QGSKNLCQVAWNFVNDSLRTSLCLHYPPDL 200
Query: 233 IALACIYIASVYRE-----KDNTAWFEELRVDMNVV 263
I+ A IY+A+ + ++ W+E L + V+
Sbjct: 201 ISYASIYLATRFLNYQLITENKKEWWEMLGIKFEVL 236
>UNIPROTKB|J3QT30 [details] [associations]
symbol:FAM58A "Cyclin-related protein FAM58A" species:9606
"Homo sapiens" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 HGNC:HGNC:28434 EMBL:AF274858
ProteinModelPortal:J3QT30 Ensembl:ENST00000406277 Uniprot:J3QT30
Length = 246
Score = 146 (56.5 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 43/163 (26%), Positives = 83/163 (50%)
Query: 100 VRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS 159
+R +ATA T + + ++ YDP+L+A + +YLA K EE ++ R ++ + ++
Sbjct: 41 MRSIPIATACTIYHKFFCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFN 100
Query: 160 --------DEKYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDIN--- 207
D ++ +E++D I++ E+ +L L + + HP++ L+ +L N +N
Sbjct: 101 PSGEPLELDSRF-WELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLVSL-QNWLNRHS 158
Query: 208 -----MTHLSWGILNDTYKMDLILVHPPHLIALACIYIA-SVY 244
+ +W +L D+Y L L IA+A +Y+A VY
Sbjct: 159 WQRTPVAVTAWALLRDSYHGALCLRFQAQHIAVAVLYLALQVY 201
>UNIPROTKB|Q8N1B3 [details] [associations]
symbol:FAM58A "Cyclin-related protein FAM58A" species:9606
"Homo sapiens" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR015429 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026 HOVERGEN:HBG050836
CTD:92002 HOGENOM:HOG000044948 EMBL:BC001909 EMBL:BC007232
EMBL:BC032121 EMBL:BC071851 EMBL:DQ323993 EMBL:AY445048
IPI:IPI00643557 IPI:IPI00647327 RefSeq:NP_001124469.1
RefSeq:NP_689487.2 UniGene:Hs.496943 ProteinModelPortal:Q8N1B3
SMR:Q8N1B3 IntAct:Q8N1B3 STRING:Q8N1B3 PhosphoSite:Q8N1B3
DMDM:156630447 PRIDE:Q8N1B3 DNASU:92002 Ensembl:ENST00000370171
GeneID:92002 KEGG:hsa:92002 UCSC:uc011myr.2 UCSC:uc011mys.2
GeneCards:GC0XM152854 H-InvDB:HIX0019181 H-InvDB:HIX0171824
HGNC:HGNC:28434 HPA:HPA050137 MIM:300707 MIM:300708
neXtProt:NX_Q8N1B3 Orphanet:140952 PharmGKB:PA142671863
GenomeRNAi:92002 NextBio:77554 ArrayExpress:Q8N1B3 Bgee:Q8N1B3
CleanEx:HS_FAM58A Genevestigator:Q8N1B3 Uniprot:Q8N1B3
Length = 248
Score = 146 (56.5 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 43/163 (26%), Positives = 83/163 (50%)
Query: 100 VRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS 159
+R +ATA T + + ++ YDP+L+A + +YLA K EE ++ R ++ + ++
Sbjct: 43 MRSIPIATACTIYHKFFCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFN 102
Query: 160 --------DEKYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDIN--- 207
D ++ +E++D I++ E+ +L L + + HP++ L+ +L N +N
Sbjct: 103 PSGEPLELDSRF-WELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLVSL-QNWLNRHS 160
Query: 208 -----MTHLSWGILNDTYKMDLILVHPPHLIALACIYIA-SVY 244
+ +W +L D+Y L L IA+A +Y+A VY
Sbjct: 161 WQRTPVAVTAWALLRDSYHGALCLRFQAQHIAVAVLYLALQVY 203
>UNIPROTKB|F1Q423 [details] [associations]
symbol:CCNL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR015431 InterPro:IPR017060 PIRSF:PIRSF036580
GO:GO:0000079 GO:GO:0006355 GO:GO:0006396 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
PANTHER:PTHR10026:SF2 OMA:CELIQSA EMBL:AAEX03013713
Ensembl:ENSCAFT00000014104 Uniprot:F1Q423
Length = 461
Score = 152 (58.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 40/159 (25%), Positives = 82/159 (51%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT R + KS ++ +VA C+ LASK E++ + R + VF+ +
Sbjct: 30 LRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEKAPRRIRDVINVFHHL 89
Query: 155 KKIYS---------DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
+++ D+ Y +++ E ++L+ L + + V HP++ +V +LQ +
Sbjct: 90 RQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECER 149
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N + +W +ND+ + ++ + P IA ACIY+A+
Sbjct: 150 NQ-TLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAA 187
>UNIPROTKB|E1BQ09 [details] [associations]
symbol:FAM58A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 OMA:CLRFRAQ
EMBL:DAAA02070073 IPI:IPI00732074 Ensembl:ENSBTAT00000015084
Uniprot:E1BQ09
Length = 253
Score = 146 (56.5 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 46/158 (29%), Positives = 81/158 (51%)
Query: 100 VRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIY- 158
+R +ATA T + + ++ YDP+LVA + LYLA K EE ++ R ++ + +
Sbjct: 48 MRSIPIATACTIYHKFFCEINLDAYDPYLVAMSSLYLAGKVEEQHLRTRDIINVSNRYFH 107
Query: 159 --SD----EKYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINM--- 208
SD + +E++D I++ E+ +L L + + HP++ L+ +L N +N
Sbjct: 108 PGSDPLELDSRFWEIRDSIVQCELLVLRVLRFQVSFQHPHKYLLHYLVSL-KNWLNRYSW 166
Query: 209 --THLS---WGILNDTYKMDLILVHPPHLIALACIYIA 241
T +S W +L D+Y L L IA+A I++A
Sbjct: 167 QRTPVSITAWALLQDSYHGGLCLRFRAQHIAVAVIHLA 204
>POMBASE|SPAC1296.05c [details] [associations]
symbol:lcp1 "cyclin L family cyclin" species:4896
"Schizosaccharomyces pombe" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=NAS]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 PomBase:SPAC1296.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000079 EMBL:CU329670 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016538 eggNOG:COG5333 PANTHER:PTHR10026
PIR:T37566 RefSeq:NP_593045.1 ProteinModelPortal:O94612
EnsemblFungi:SPAC1296.05c.1 GeneID:2542980 KEGG:spo:SPAC1296.05c
OrthoDB:EOG47Q1FZ NextBio:20804013 Uniprot:O94612
Length = 258
Score = 145 (56.1 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 43/171 (25%), Positives = 79/171 (46%)
Query: 76 LLKITSSLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTC-- 133
LL +T + C ++R R V + C + S T P V C
Sbjct: 41 LLNLTQNCVIVCLILFRRYCTLYPPR---VPDLDAIVMACVSIGSKTTETPASVQDICNV 97
Query: 134 -LYLASKAEESTVQARLLVFYIKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYR 192
+YL + +++ +AR F +YS+E Y + + ME+++L ALN+ + P++
Sbjct: 98 VVYLKERFKDTNFEAR--GFIAHDLYSEEMYSSRNR-LSNMELEVLRALNFDTHIVIPHK 154
Query: 193 SLVQFLQDAGMNDIN-MTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
+ +LQ + D + ++W LND + L +++PP +A CI +A+
Sbjct: 155 LAIHYLQTLQLIDNKKLLQITWNFLNDASRTRLCVLYPPFSLACGCIAMAA 205
>UNIPROTKB|K7EM37 [details] [associations]
symbol:FAM58A "Cyclin-related protein FAM58A" species:9606
"Homo sapiens" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 HGNC:HGNC:28434 EMBL:AF274858
Ensembl:ENST00000482182 Uniprot:K7EM37
Length = 142
Score = 126 (49.4 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 36/144 (25%), Positives = 73/144 (50%)
Query: 100 VRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS 159
+R +ATA T + + ++ YDP+L+A + +YLA K EE ++ R ++ + ++
Sbjct: 1 MRSIPIATACTIYHKFFCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFN 60
Query: 160 --------DEKYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDIN--- 207
D ++ +E++D I++ E+ +L L + + HP++ L+ +L N +N
Sbjct: 61 PSGEPLELDSRF-WELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLVSL-QNWLNRHS 118
Query: 208 -----MTHLSWGILNDTYKMDLIL 226
+ +W +L D+Y L L
Sbjct: 119 WQRTPVAVTAWALLRDSYHGALCL 142
>ZFIN|ZDB-GENE-050419-206 [details] [associations]
symbol:ccnl1a "cyclin L1a" species:7955 "Danio
rerio" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR015431
InterPro:IPR017060 PIRSF:PIRSF036580 ZFIN:ZDB-GENE-050419-206
GO:GO:0000079 GO:GO:0006355 GO:GO:0006396 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 HOVERGEN:HBG056044
PANTHER:PTHR10026:SF2 EMBL:BC139645 IPI:IPI00496482
RefSeq:NP_001082832.1 UniGene:Dr.133317 ProteinModelPortal:A4QP43
GeneID:553269 KEGG:dre:553269 CTD:553269 InParanoid:A4QP43
NextBio:20880042 Uniprot:A4QP43
Length = 534
Score = 148 (57.2 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 41/159 (25%), Positives = 81/159 (50%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFY-I 154
+++ Q +AT R + KS ++ +VA C+ LASK EE+ + R + VF+ +
Sbjct: 80 LRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACVNLASKIEEAPRRIRDVINVFHHL 139
Query: 155 KKIYS---------DEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQ--DAGM 203
+++ D+ Y +++ E +IL+ L + + V HP++ +V +LQ +
Sbjct: 140 RQLRGKRSPSPLILDQNYINTKNQVIKAERRILKELGFCVHVKHPHKIIVMYLQVLECEK 199
Query: 204 NDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIAS 242
N + +W +ND+ + ++ + IA ACIY+A+
Sbjct: 200 NQ-TLVQTAWNYMNDSLRTNVFVRFQAETIACACIYLAA 237
>UNIPROTKB|E1BEV0 [details] [associations]
symbol:CCNK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000102036 EMBL:DAAA02053215
EMBL:DAAA02053216 IPI:IPI00824135 Ensembl:ENSBTAT00000024796
Uniprot:E1BEV0
Length = 584
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/198 (23%), Positives = 95/198 (47%)
Query: 59 TKKTWMW--RNLL-TEKRASLLKITSSLRCR---CPTIYRNLAQHVKVRQRVVATAVTYM 112
TK W W ++L T + L + R R I+ ++ + + +AT + Y
Sbjct: 20 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIF-DVGTRLGLHYDTLATGIIYF 78
Query: 113 RRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY---EVKD 169
R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++ + K+
Sbjct: 79 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE 138
Query: 170 -ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYKM--D 223
++ +E +L+ + + L V HPY+ L+++ + N I + ++W +ND +
Sbjct: 139 EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDRTSLCTT 198
Query: 224 LILVHPPHLIALACIYIA 241
L L P +IA+A +Y+A
Sbjct: 199 LSLQWEPEIIAVAVMYLA 216
>UNIPROTKB|F1SAQ3 [details] [associations]
symbol:CCNK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000102036 OMA:MSTTNSY
EMBL:CU469315 EMBL:CT826393 Ensembl:ENSSSCT00000002787
Uniprot:F1SAQ3
Length = 584
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/198 (23%), Positives = 95/198 (47%)
Query: 59 TKKTWMW--RNLL-TEKRASLLKITSSLRCR---CPTIYRNLAQHVKVRQRVVATAVTYM 112
TK W W ++L T + L + R R I+ ++ + + +AT + Y
Sbjct: 20 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIF-DVGTRLGLHYDTLATGIIYF 78
Query: 113 RRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY---EVKD 169
R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++ + K+
Sbjct: 79 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE 138
Query: 170 -ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYKM--D 223
++ +E +L+ + + L V HPY+ L+++ + N I + ++W +ND +
Sbjct: 139 EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDRTSLCTT 198
Query: 224 LILVHPPHLIALACIYIA 241
L L P +IA+A +Y+A
Sbjct: 199 LSLQWEPEIIAVAVMYLA 216
>UNIPROTKB|G3N172 [details] [associations]
symbol:CCNK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000102036 EMBL:DAAA02053215
EMBL:DAAA02053216 OMA:MSTTNSY Ensembl:ENSBTAT00000063128
Uniprot:G3N172
Length = 585
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/198 (23%), Positives = 95/198 (47%)
Query: 59 TKKTWMW--RNLL-TEKRASLLKITSSLRCR---CPTIYRNLAQHVKVRQRVVATAVTYM 112
TK W W ++L T + L + R R I+ ++ + + +AT + Y
Sbjct: 20 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIF-DVGTRLGLHYDTLATGIIYF 78
Query: 113 RRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY---EVKD 169
R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++ + K+
Sbjct: 79 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE 138
Query: 170 -ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYKM--D 223
++ +E +L+ + + L V HPY+ L+++ + N I + ++W +ND +
Sbjct: 139 EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDRTSLCTT 198
Query: 224 LILVHPPHLIALACIYIA 241
L L P +IA+A +Y+A
Sbjct: 199 LSLQWEPEIIAVAVMYLA 216
>UNIPROTKB|E2RN80 [details] [associations]
symbol:CCNK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GeneTree:ENSGT00690000102036 EMBL:AAEX03005979 EMBL:AAEX03005980
Ensembl:ENSCAFT00000028286 OMA:MSTTNSY Uniprot:E2RN80
Length = 588
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/198 (23%), Positives = 95/198 (47%)
Query: 59 TKKTWMW--RNLL-TEKRASLLKITSSLRCR---CPTIYRNLAQHVKVRQRVVATAVTYM 112
TK W W ++L T + L + R R I+ ++ + + +AT + Y
Sbjct: 20 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIF-DVGTRLGLHYDTLATGIIYF 78
Query: 113 RRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRY---EVKD 169
R Y S ++ ++ CL+LA K EE+ + + ++ + + +D ++ + K+
Sbjct: 79 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKE 138
Query: 170 -ILEMEMKILEALNYYLVVFHPYRSLVQFLQD--AGMNDIN-MTHLSWGILNDTYKM--D 223
++ +E +L+ + + L V HPY+ L+++ + N I + ++W +ND +
Sbjct: 139 EVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDRTSLCTT 198
Query: 224 LILVHPPHLIALACIYIA 241
L L P +IA+A +Y+A
Sbjct: 199 LSLQWEPEIIAVAVMYLA 216
>FB|FBgn0025455 [details] [associations]
symbol:CycT "Cyclin T" species:7227 "Drosophila melanogaster"
[GO:0008024 "positive transcription elongation factor complex b"
evidence=TAS;IPI] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=ISS]
[GO:0009408 "response to heat" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0005703 "polytene chromosome puff"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0008353 "RNA
polymerase II carboxy-terminal domain kinase activity"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IMP] [GO:0008360
"regulation of cell shape" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IMP] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032783 "ELL-EAF complex" evidence=IPI]
InterPro:IPR015429 InterPro:IPR015430 GO:GO:0000079 EMBL:AE014296
GO:GO:0006355 GO:GO:0007015 GO:GO:0008360 GO:GO:0006351
GO:GO:0009408 GO:GO:0007049 GO:GO:0032783 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0008353 GO:GO:0016538 eggNOG:COG5333
PANTHER:PTHR10026 GeneTree:ENSGT00690000102036 KO:K15188
GO:GO:0008024 PANTHER:PTHR10026:SF12 EMBL:AF051933 PIR:T13033
RefSeq:NP_524127.2 RefSeq:NP_996117.1 UniGene:Dm.20508
ProteinModelPortal:O96433 SMR:O96433 DIP:DIP-29892N IntAct:O96433
MINT:MINT-294087 STRING:O96433 PaxDb:O96433
EnsemblMetazoa:FBtr0075205 EnsemblMetazoa:FBtr0333124 GeneID:39961
KEGG:dme:Dmel_CG6292 CTD:13067 FlyBase:FBgn0025455
InParanoid:O96433 OMA:RNSMASA OrthoDB:EOG4S1RP2 PhylomeDB:O96433
GenomeRNAi:39961 NextBio:816293 Bgee:O96433 GermOnline:CG6292
GO:GO:0005703 Uniprot:O96433
Length = 1097
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 52/226 (23%), Positives = 101/226 (44%)
Query: 26 RSRTQKDYSNSGKGGVKKWLPISGHRRTTNSFWTKKTWMWRN---LLTEKRASLLKITSS 82
++ T S++ +PI+ + F K W + N + R +K
Sbjct: 10 QAATASSSSSASAAASASGIPITANNNLP--FEKDKIWYFSNDQLANSPSRRCGIKGDDE 67
Query: 83 LRCRCPTIY--RNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKA 140
L+ R T Y + + Q ++V Q + TA+ YM R Y S T + + +A L+LA+K
Sbjct: 68 LQYRQMTAYLIQEMGQRLQVSQLCINTAIVYMHRFYAFHSFTHFHRNSMASASLFLAAKV 127
Query: 141 EESTVQARLLVFYIKKIY---SDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQF 197
EE + ++ K +++ Y ++++ E +L+ L + + + HP+ +V+
Sbjct: 128 EEQPRKLEHVIRAANKCLPPTTEQNYAELAQELVFNENVLLQTLGFDVAIDHPHTHVVRT 187
Query: 198 LQDA-GMNDINMTHLSWGIL-NDTYKMDLILVHPPHLIALACIYIA 241
Q D+ T S+ + N + + L + P ++A CIY+A
Sbjct: 188 CQLVKACKDLAQT--SYFLASNSLHLTSMCLQYRPTVVACFCIYLA 231
>ZFIN|ZDB-GENE-050522-495 [details] [associations]
symbol:fam58a "family with sequence similarity 58,
member A" species:7955 "Danio rerio" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR015429 ZFIN:ZDB-GENE-050522-495 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026 HOVERGEN:HBG050836
EMBL:BC095369 IPI:IPI00481495 RefSeq:NP_001018459.1
UniGene:Dr.39528 ProteinModelPortal:Q503D6 GeneID:553650
KEGG:dre:553650 CTD:92002 HOGENOM:HOG000044948 InParanoid:Q503D6
OrthoDB:EOG45TCP3 NextBio:20880384 Uniprot:Q503D6
Length = 247
Score = 139 (54.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 42/162 (25%), Positives = 80/162 (49%)
Query: 98 VKVRQRVV--ATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIK 155
VK+ R V ATA R + S+ Y+P+LVA + ++LA K EE ++ R ++
Sbjct: 41 VKLGMRSVPMATACVLYHRFFQSASLQIYEPYLVAMSAIHLAGKVEEQHLRTRDIINVCH 100
Query: 156 KIYSDE--------KYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDA----- 201
+ + + K+ +E++D I++ E+ IL LN+ + HP++ L+ +L
Sbjct: 101 RYFHPDSEPLELNGKF-WELRDSIVQCELLILRQLNFQVTFEHPHKYLLHYLLSVRSLLN 159
Query: 202 --GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
+ + + +L D+Y + + H P +AL +Y+A
Sbjct: 160 RHAWSRTPIAETALAVLKDSYHGSVCVRHRPQHLALTALYLA 201
>UNIPROTKB|F1S2B1 [details] [associations]
symbol:LOC100520599 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 OMA:CLRFRAQ
EMBL:FP102397 RefSeq:XP_003360534.1 Ensembl:ENSSSCT00000013961
GeneID:100520599 KEGG:ssc:100520599 Uniprot:F1S2B1
Length = 250
Score = 139 (54.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 44/154 (28%), Positives = 77/154 (50%)
Query: 105 VATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS----- 159
VATA + + ++ YDP+LVA + LYLA K EE ++ R ++ + +
Sbjct: 50 VATACAIYHKFFCEIALDAYDPYLVAMSSLYLAGKVEEQHLRTRDIINVSNRYFHPGSEP 109
Query: 160 ---DEKYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINM-----TH 210
D ++ +E++D I++ E+ +L L + + HP++ L+ +L N +N T
Sbjct: 110 LELDSRF-WELRDSIVQCELLVLRVLRFQVSFQHPHKYLLHYLLSL-KNWLNRHSWQRTP 167
Query: 211 LS---WGILNDTYKMDLILVHPPHLIALACIYIA 241
+S W +L D+Y L L IA A +Y+A
Sbjct: 168 VSVTAWALLRDSYHGGLCLRFRAQHIAAAVLYLA 201
>UNIPROTKB|F1NIJ9 [details] [associations]
symbol:CCNT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR015429 GO:GO:0005634
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000102036 OMA:YQVGYGH
EMBL:AADN02016953 EMBL:AADN02016950 EMBL:AADN02016951
EMBL:AADN02016952 IPI:IPI00599771 Ensembl:ENSGALT00000019931
Uniprot:F1NIJ9
Length = 666
Score = 146 (56.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 45/175 (25%), Positives = 84/175 (48%)
Query: 82 SLRCRCPTIYRNLAQHVKVR--QRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASK 139
S R + + +++ Q + Q + TA+ YM R Y S T+++ ++++PT L+LA+K
Sbjct: 34 SYRQQAANLIQDMGQRLNSSRSQLTINTAIVYMHRFYMHHSFTKFNRNIISPTALFLAAK 93
Query: 140 AEESTVQARLLVFYIKKIYS---------DEK---YRYEVKDILEMEMKILEALNYYLVV 187
EE Q R L IK + + D K Y + ++++ +E +L+ L + + +
Sbjct: 94 VEE---QPRKLEHVIKVVNACLHPHEPQLDTKCDAYLQQAQELVILETIMLQTLGFEITI 150
Query: 188 FHPYRSLVQFLQDA-GMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIA 241
HP+ +V+ Q D+ T N + L + P +IA CI++A
Sbjct: 151 EHPHTDVVKCTQLVRASKDLAQTSYFMAT-NSLHLTTFCLQYKPTVIACVCIHLA 204
>TAIR|locus:2196919 [details] [associations]
symbol:CYCT1;3 "cyclin T 1;3" species:3702 "Arabidopsis
thaliana" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
InterPro:IPR015429 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0000079 GO:GO:0051301 GO:GO:0006355
GO:GO:0007049 EMBL:AC012375 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
HOGENOM:HOG000220828 KO:K15188 EMBL:AC005916 EMBL:AK117692
EMBL:AF344323 EMBL:AY062805 EMBL:AY081601 EMBL:AK229729
EMBL:AY087303 IPI:IPI00533908 IPI:IPI00846873 PIR:D86401
RefSeq:NP_174084.1 UniGene:At.11523 ProteinModelPortal:Q8LBC0
SMR:Q8LBC0 IntAct:Q8LBC0 STRING:Q8LBC0 EnsemblPlants:AT1G27630.1
GeneID:839655 KEGG:ath:AT1G27630 GeneFarm:4113 TAIR:At1g27630
InParanoid:Q8LBC0 OMA:CYTVLCY PhylomeDB:Q8LBC0
ProtClustDB:CLSN2914630 Genevestigator:Q8LBC0 Uniprot:Q8LBC0
Length = 317
Score = 140 (54.3 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 50/182 (27%), Positives = 86/182 (47%)
Query: 81 SSLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKA 140
S LR T + L + V Q ++ A+ R Y R+S + D +A + L+LA KA
Sbjct: 58 SFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFYMRQSHAKNDWQTIATSSLFLACKA 117
Query: 141 EE------STVQARLLVFY------IKKIYSDEKYRYEVKDI-LEMEMKILEALNYYLVV 187
E+ S V A + Y +I+ E Y +E K+I L E +L ++L +
Sbjct: 118 EDEPCQLSSVVVASYEIIYEWDPSASIRIHQTECY-HEFKEIILSGESLLLSTSAFHLDI 176
Query: 188 FHPYRSLVQFLQDAGMNDIN----MTHLSWGILNDTYKMDLILVHPPHLIALACIYIASV 243
PY+ L A +N +N + +W ++D + L L + PH+IA A +++A+
Sbjct: 177 ELPYKPLA-----AALNRLNAWPDLATAAWNFVHDWIRTTLCLQYKPHVIATATVHLAAT 231
Query: 244 YR 245
++
Sbjct: 232 FQ 233
>TAIR|locus:2066185 [details] [associations]
symbol:RCY1 "arginine-rich cyclin 1" species:3702
"Arabidopsis thaliana" [GO:0000079 "regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;RCA;TAS] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=ISS]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0009651 "response to
salt stress" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0010440 "stomatal lineage progression" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR015429 InterPro:IPR017060 PIRSF:PIRSF036580
GO:GO:0009506 GO:GO:0000079 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0006355 GO:GO:0009651 GO:GO:0006396
GO:GO:0007049 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026 EMBL:AF249734
EMBL:AC002505 EMBL:AY091085 EMBL:AY150419 EMBL:AK226505
EMBL:AY086218 IPI:IPI00548032 PIR:T00976 RefSeq:NP_565622.1
UniGene:At.19077 ProteinModelPortal:Q8RWV3 SMR:Q8RWV3 IntAct:Q8RWV3
STRING:Q8RWV3 PaxDb:Q8RWV3 PRIDE:Q8RWV3 EnsemblPlants:AT2G26430.1
GeneID:817183 KEGG:ath:AT2G26430 GeneFarm:4110 TAIR:At2g26430
HOGENOM:HOG000005997 InParanoid:Q8RWV3 OMA:GADGSEN PhylomeDB:Q8RWV3
ProtClustDB:CLSN2688446 Genevestigator:Q8RWV3 Uniprot:Q8RWV3
Length = 416
Score = 142 (55.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 43/182 (23%), Positives = 91/182 (50%)
Query: 98 VKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR--LLVFYIK 155
+K+ Q V+AT +R Y +KS+ ++D +VA +C++LASK EE+ +AR ++VF+
Sbjct: 49 LKLPQAVMATGQVLFQRFYCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRM 108
Query: 156 KIYSD-------EKY--RY-EVK-DILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMN 204
+ + + Y ++ E+K ++ E IL+ + + V HP++ + +L
Sbjct: 109 ECRRENLPLEHLDMYAKKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETP 168
Query: 205 DINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYRE---KDNTAWFEELRVDMN 261
+ +W + ND+ + L + ++A +Y A+ + +N W++ D +
Sbjct: 169 P-ELRQEAWNLANDSLRTTLCVRFRSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKS 227
Query: 262 VV 263
+
Sbjct: 228 SI 229
>ASPGD|ASPL0000078061 [details] [associations]
symbol:pchA species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000079 "regulation
of cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:1901407 "regulation of phosphorylation of RNA polymerase II
C-terminal domain" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR004367 InterPro:IPR015429 Pfam:PF02984
GO:GO:0005634 GO:GO:0000079 GO:GO:0006355 EMBL:BN001303
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 EMBL:AACD01000084
eggNOG:COG5333 PANTHER:PTHR10026 OrthoDB:EOG4WWVTW
RefSeq:XP_662585.1 ProteinModelPortal:Q5B399 STRING:Q5B399
EnsemblFungi:CADANIAT00005414 GeneID:2872782 KEGG:ani:AN4981.2
HOGENOM:HOG000196737 OMA:GHNTMAT Uniprot:Q5B399
Length = 513
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 49/152 (32%), Positives = 83/152 (54%)
Query: 126 PHLVAPTCLYLASKAEESTVQARLLVFYI-----KK--IYSDEKYR--YEVKD-ILEMEM 175
P+ +A T L+LA+K EE+ + + LV + KK + DE+ + ++ +D IL E
Sbjct: 100 PYPIAATSLFLATKVEENVRRMKELVIAVCRVAQKKPDLVVDEQSKEFWKWRDTILHHED 159
Query: 176 KILEALNYYLVVFHPYRSLVQFLQDAGMNDI-NMTHLSWGILNDTYKMDLILVHPPHLIA 234
+LEAL + L + PYR L F+ +ND ++ + SW LND+ L L P +IA
Sbjct: 160 ILLEALCFDLQLEQPYRILYDFICFFRVNDNKHIRNSSWAFLNDSMYTVLCLQFPARVIA 219
Query: 235 LACIYIASVYRE---KDNT---AWFEELRVDM 260
A Y A+ + + +D+ +W+E++ VD+
Sbjct: 220 AAAFYAAASHCDIGFEDDEFGRSWWEQIDVDI 251
>TAIR|locus:2143671 [details] [associations]
symbol:CYCH;1 "cyclin H;1" species:3702 "Arabidopsis
thaliana" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005675
"holo TFIIH complex" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISS] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0010440
"stomatal lineage progression" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0045736 "negative regulation
of cyclin-dependent protein serine/threonine kinase activity"
evidence=RCA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0005634 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000079 GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 GO:GO:0004672 EMBL:AC007478
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 PANTHER:PTHR10026 EMBL:AB051072 EMBL:AK118707
IPI:IPI00548103 RefSeq:NP_198114.2 UniGene:At.27359 HSSP:P51946
ProteinModelPortal:Q8W5S1 SMR:Q8W5S1 IntAct:Q8W5S1 STRING:Q8W5S1
PaxDb:Q8W5S1 PRIDE:Q8W5S1 EnsemblPlants:AT5G27620.1 GeneID:832824
KEGG:ath:AT5G27620 GeneFarm:3392 TAIR:At5g27620
HOGENOM:HOG000030045 InParanoid:Q8W5S1 KO:K06634 OMA:HKIQATA
PhylomeDB:Q8W5S1 ProtClustDB:CLSN2690204 Genevestigator:Q8W5S1
GO:GO:0005675 PANTHER:PTHR10026:SF8 Uniprot:Q8W5S1
Length = 336
Score = 140 (54.3 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 46/150 (30%), Positives = 79/150 (52%)
Query: 103 RVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEK 162
++ ATA+ Y +R Y + S+ ++ P + TC+Y A K EE+ V A + K I D +
Sbjct: 99 KIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACKIEENHVSAEEIG---KGINQDHR 155
Query: 163 YRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQD------AGMNDIN-MTHLSWGI 215
IL+ EM +L++L + L+V+ PYR++ F+ + A ++I + L G
Sbjct: 156 I------ILKYEMAVLQSLEFDLIVYAPYRAIEGFVNNMEEFLQARDDEIQKLESLLKGA 209
Query: 216 LNDTYKM---DLILVHPPHLIALACIYIAS 242
+ K+ D L+ PP +ALA + IA+
Sbjct: 210 TAEADKVMLTDAPLLFPPGQLALASLRIAN 239
>SGD|S000006229 [details] [associations]
symbol:CCL1 "Cyclin associated with protein kinase Kin28p"
species:4932 "Saccharomyces cerevisiae" [GO:0070985 "TFIIK complex"
evidence=IEA;IDA] [GO:0070816 "phosphorylation of RNA polymerase II
C-terminal domain" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0000990 "core RNA polymerase binding
transcription factor activity" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005675 "holo
TFIIH complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA;IGI;IPI] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR015429 InterPro:IPR027081 SGD:S000006229
GO:GO:0005739 GO:GO:0000079 GO:GO:0006366 EMBL:Z71255 EMBL:BK006949
EMBL:Z49274 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0070816 GO:GO:0016538 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 PANTHER:PTHR10026:SF8 EMBL:X71902
PIR:S39383 RefSeq:NP_015350.1 ProteinModelPortal:P37366 SMR:P37366
DIP:DIP-2258N IntAct:P37366 MINT:MINT-528773 STRING:P37366
PaxDb:P37366 PeptideAtlas:P37366 EnsemblFungi:YPR025C GeneID:856136
KEGG:sce:YPR025C CYGD:YPR025c GeneTree:ENSGT00390000008634
HOGENOM:HOG000247914 OMA:EDDIYRT OrthoDB:EOG4CRQ82 NextBio:981239
Genevestigator:P37366 GermOnline:YPR025C GO:GO:0070985
TIGRFAMs:TIGR00569 Uniprot:P37366
Length = 393
Score = 141 (54.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 33/107 (30%), Positives = 57/107 (53%)
Query: 94 LAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFY 153
+AQH+ + VVATA+++ RR + S+ + DP + T ++LA K+E ++
Sbjct: 127 IAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSEN---------YF 177
Query: 154 IKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQD 200
I +K + +L+ E K+LE+L + L+ HPY+ L F D
Sbjct: 178 ISVDSFAQKAKSTRDSVLKFEFKLLESLKFSLLNHHPYKPLHGFFLD 224
>RGD|1305651 [details] [associations]
symbol:Fam58b "family with sequence similarity 58, member B"
species:10116 "Rattus norvegicus" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR015429 RGD:1305651 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 HOVERGEN:HBG050836
HOGENOM:HOG000044948 OrthoDB:EOG45TCP3 EMBL:BC086445 EMBL:BC097941
IPI:IPI00370323 RefSeq:NP_001020583.1 UniGene:Rn.38890
ProteinModelPortal:Q4QQW5 PhosphoSite:Q4QQW5
Ensembl:ENSRNOT00000011019 GeneID:303321 KEGG:rno:303321 CTD:69109
InParanoid:Q4QQW5 OMA:CLRFRAQ NextBio:651142 Genevestigator:Q4QQW5
Uniprot:Q4QQW5
Length = 250
Score = 135 (52.6 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 44/158 (27%), Positives = 81/158 (51%)
Query: 105 VATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS----- 159
+ATA T + + ++ YD +LVA + LYLA K EE ++ R ++ + ++
Sbjct: 50 IATACTIYHKFFCEINLDAYDLYLVAMSSLYLAGKVEEQHLRTRDIINVSHRYFNPGSEP 109
Query: 160 ---DEKYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINM-----TH 210
D ++ +E++D I++ E+ +L L + + HP++ L+ +L N +N T
Sbjct: 110 LELDSRF-WELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISL-KNWLNRYSWQRTP 167
Query: 211 LS---WGILNDTYKMDLILVHPPHLIALACIYIA-SVY 244
+S W +L D+Y L L +A+A +Y+A VY
Sbjct: 168 ISVTAWALLRDSYHGGLCLRFQAQHLAVAVLYLALQVY 205
>POMBASE|SPBP16F5.02 [details] [associations]
symbol:mcs2 "TFIIH complex cyclin Mcs2" species:4896
"Schizosaccharomyces pombe" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0000718 "nucleotide-excision repair, DNA damage
removal" evidence=ISS] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005675 "holo TFIIH complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISO] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IGI] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 PomBase:SPBP16F5.02 GO:GO:0007346 GO:GO:0000079
GO:GO:0051301 GO:GO:0006355 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0007049 GO:GO:0006367 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0004861 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8 OrthoDB:EOG4CRQ82
TIGRFAMs:TIGR00569 GO:GO:0000718 EMBL:S59895 PIR:S35380
RefSeq:NP_595776.1 ProteinModelPortal:P36613 IntAct:P36613
STRING:P36613 EnsemblFungi:SPBP16F5.02.1 GeneID:2540555
KEGG:spo:SPBP16F5.02 HOGENOM:HOG000197843 OMA:ACFYLAM
NextBio:20801681 Uniprot:P36613
Length = 322
Score = 136 (52.9 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 41/154 (26%), Positives = 71/154 (46%)
Query: 94 LAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFY 153
L+ + + + +TA+ + +R Y S+ EY P +++ T L+LA+K + +
Sbjct: 80 LSSALSLPTHIRSTAILFFKRFYLINSVMEYSPKIISFTSLFLATKCNDHYISIEQFCKN 139
Query: 154 IKKIYSDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDA-------GMNDI 206
+ K +E +LE E + ++L + L V+ P+R L FL D +
Sbjct: 140 MPKTTPEE--------VLEYEFNVCQSLKWDLYVWLPFRPLQGFLLDCQTVLPKVAVEKF 191
Query: 207 NMTH-LSWGILNDTYKMDLILVHPPHLIALACIY 239
H LS L +T D+ +H P +IAL IY
Sbjct: 192 YECHDLSKKFLIETLHSDIYFLHSPSIIALGAIY 225
>MGI|MGI:1916359 [details] [associations]
symbol:Fam58b "family with sequence similarity 58, member B"
species:10090 "Mus musculus" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0019901 "protein
kinase binding" evidence=IEA] InterPro:IPR015429 MGI:MGI:1916359
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 HOVERGEN:HBG050836
HOGENOM:HOG000044948 OrthoDB:EOG45TCP3 CTD:69109 OMA:CLRFRAQ
EMBL:AL591376 EMBL:BC027022 IPI:IPI00323157 RefSeq:NP_932106.1
UniGene:Mm.490367 ProteinModelPortal:Q8QZR8 SMR:Q8QZR8
STRING:Q8QZR8 PhosphoSite:Q8QZR8 PRIDE:Q8QZR8 DNASU:69109
Ensembl:ENSMUST00000059468 GeneID:69109 KEGG:mmu:69109
UCSC:uc007kjz.1 InParanoid:Q8QZR8 NextBio:328624 Bgee:Q8QZR8
CleanEx:MM_1810009O10RIK Genevestigator:Q8QZR8 Uniprot:Q8QZR8
Length = 250
Score = 133 (51.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 43/158 (27%), Positives = 81/158 (51%)
Query: 105 VATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS----- 159
+ATA T + + ++ YD +LVA + +YLA K EE ++ R ++ + ++
Sbjct: 50 IATACTIYHKFFCEINLDAYDLYLVAMSSIYLAGKVEEQHLRTRDIINVSHRYFNPGSEP 109
Query: 160 ---DEKYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINM-----TH 210
D ++ +E++D I++ E+ +L L + + HP++ L+ +L N +N T
Sbjct: 110 LELDSRF-WELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISL-KNWLNRYSWQRTP 167
Query: 211 LS---WGILNDTYKMDLILVHPPHLIALACIYIA-SVY 244
+S W +L D+Y L L +A+A +Y+A VY
Sbjct: 168 ISVTAWALLRDSYHGGLCLRFQAQHLAVAVLYLALQVY 205
>WB|WBGene00000506 [details] [associations]
symbol:cic-1 species:6239 "Caenorhabditis elegans"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0007275 GO:GO:0000079 GO:GO:0006355 GO:GO:0006351
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007 KO:K15161
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 OMA:FFANVIQ
EMBL:FO081521 PIR:T33884 RefSeq:NP_497548.2
ProteinModelPortal:Q9TYP2 SMR:Q9TYP2 EnsemblMetazoa:H14E04.5
GeneID:175357 KEGG:cel:CELE_H14E04.5 UCSC:H14E04.5 CTD:175357
WormBase:H14E04.5 InParanoid:Q9TYP2 NextBio:887802 Uniprot:Q9TYP2
Length = 302
Score = 135 (52.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/109 (34%), Positives = 58/109 (53%)
Query: 99 KVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEEST---VQARL--LVFY 153
K+RQ+V+ATA+ Y +R Y R+S + P LVA T L+LA K EE T V + L
Sbjct: 65 KLRQQVIATAIIYFKRFYLRQSFRDMCPFLVASTALFLACKVEEHTTLSVSSFLKNTAIV 124
Query: 154 IKKIYSDEKYRYEVKD--ILEMEMKILEALNYYLVVFHPYRSLVQFLQD 200
+ K + K+ + + E ++E L+ LVV H R + + L+D
Sbjct: 125 LPKRWGVTFETTSTKNGVVYDSEFILVEILDCCLVVHHASRPMFELLED 173
>UNIPROTKB|F1PZJ6 [details] [associations]
symbol:FAM58A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 OMA:CLRFRAQ EMBL:AAEX03027078
EMBL:AAEX03027079 Ensembl:ENSCAFT00000030537 Uniprot:F1PZJ6
Length = 251
Score = 132 (51.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 43/154 (27%), Positives = 77/154 (50%)
Query: 105 VATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYS----- 159
+ATA T + + + YDP+LVA + LYLA K EE ++ R ++ + +
Sbjct: 51 IATACTIYHKFFCEIDLDAYDPYLVAMSSLYLAGKVEEQHLRTRDIINVSNRYFHPGSEP 110
Query: 160 ---DEKYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINM-----TH 210
D ++ + ++D I++ E+ +L L + + HP++ L+ +L N +N T
Sbjct: 111 LELDSRF-WALRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISL-KNWLNRYSWQRTP 168
Query: 211 LS---WGILNDTYKMDLILVHPPHLIALACIYIA 241
+S W +L D+Y L L IA+A I++A
Sbjct: 169 VSVTAWALLRDSYHGGLCLRFRAQHIAVAVIHLA 202
>UNIPROTKB|F1NYN3 [details] [associations]
symbol:CCNL1 "Cyclin-L1" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR004367 InterPro:IPR015429 InterPro:IPR015431
InterPro:IPR017060 Pfam:PF02984 PIRSF:PIRSF036580 GO:GO:0005634
GO:GO:0000079 GO:GO:0006355 GO:GO:0006396 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
PANTHER:PTHR10026:SF2 OMA:CELIQSA EMBL:AADN02021093 IPI:IPI00595942
Ensembl:ENSGALT00000015789 Uniprot:F1NYN3
Length = 403
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/129 (27%), Positives = 70/129 (54%)
Query: 128 LVAPTCLYLASKAEESTVQAR--LLVFY-IKKIYS---------DEKYRYEVKDILEMEM 175
+VA C+ LASK EE+ + R + VF+ ++++ + D+ Y +++ E
Sbjct: 4 IVAMACINLASKIEEAPRRIRDVINVFHHLRQLRAKRTPSPLILDQNYINTKNQVIKAER 63
Query: 176 KILEALNYYLVVFHPYRSLVQFLQ--DAGMNDINMTHLSWGILNDTYKMDLILVHPPHLI 233
++L+ L + + V HP++ +V +LQ + N + +W +ND+ + ++ + P I
Sbjct: 64 RVLKELGFCVHVKHPHKIIVMYLQVLECERNQ-TLVQTAWNYMNDSLRTNVFVRFQPETI 122
Query: 234 ALACIYIAS 242
A ACIY+A+
Sbjct: 123 ACACIYLAA 131
>SGD|S000003543 [details] [associations]
symbol:CTK2 "Beta subunit of C-terminal domain kinase I
(CTDK-I)" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=IC] [GO:0006468 "protein phosphorylation" evidence=IPI]
[GO:0004693 "cyclin-dependent protein serine/threonine kinase
activity" evidence=IPI] [GO:0032786 "positive regulation of
DNA-dependent transcription, elongation" evidence=IDA] [GO:0032806
"carboxy-terminal domain protein kinase complex" evidence=IPI]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045943 "positive
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0045903 "positive regulation of translational
fidelity" evidence=IPI] InterPro:IPR015429 SGD:S000003543
GO:GO:0000079 GO:GO:0005654 GO:GO:0005730 EMBL:BK006943
GO:GO:0006468 GO:GO:0006351 GO:GO:0006974 GO:GO:0007049
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 PANTHER:PTHR10026 GO:GO:0031124 GO:GO:0045903
GO:GO:0032806 GO:GO:0032786 GO:GO:0045943 EMBL:U30295 EMBL:Z49281
PIR:S56777 RefSeq:NP_012528.1 ProteinModelPortal:P46962
DIP:DIP-2105N IntAct:P46962 MINT:MINT-563465 STRING:P46962
PaxDb:P46962 EnsemblFungi:YJL006C GeneID:853450 KEGG:sce:YJL006C
CYGD:YJL006c HOGENOM:HOG000112044 KO:K15564 OMA:IRERRYV
OrthoDB:EOG4CZFQV NextBio:974009 Genevestigator:P46962
GermOnline:YJL006C Uniprot:P46962
Length = 323
Score = 131 (51.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 47/170 (27%), Positives = 83/170 (48%)
Query: 93 NLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQAR---- 148
+L +K ++ + TAV + +R + + VA +CL L K E+ +
Sbjct: 48 DLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICT 107
Query: 149 --LLVFYIKKIYSDEKYRYEVKDILEMEMKILEALNY-YLVVFHPYRSLVQFLQDAGMN- 204
L + + KI +D ++ K + ++E++ILE+ ++ Y V + Y + +++ G
Sbjct: 108 LSLRLRNVVKINTDILENFK-KRVFQIELRILESCSFDYRV--NNYVHIDEYVIKIGREL 164
Query: 205 --DINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAW 252
D + +L+W I D K++ ILV P H IALA + IA Y DN W
Sbjct: 165 SFDYKLCNLAWVIAYDALKLETILVIPQHSIALAILKIA--YELLDNKNW 212
>DICTYBASE|DDB_G0285553 [details] [associations]
symbol:cycL "cyclin" species:44689 "Dictyostelium
discoideum" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
dictyBase:DDB_G0285553 GO:GO:0000079 GenomeReviews:CM000153_GR
GO:GO:0006355 EMBL:AAFI02000079 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 eggNOG:COG5333 PANTHER:PTHR10026 OMA:NTHVALP
RefSeq:XP_638121.1 ProteinModelPortal:Q54N22
EnsemblProtists:DDB0231778 GeneID:8625170 KEGG:ddi:DDB_G0285553
InParanoid:Q54N22 ProtClustDB:CLSZ2728918 Uniprot:Q54N22
Length = 273
Score = 127 (49.8 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 47/190 (24%), Positives = 89/190 (46%)
Query: 66 RNLLTEKRASLLKITSSLRCRCPTIYRNLAQHVKVRQRVVATAVTYMRRCYTRKSMTEYD 125
+N + K +I +LR + + +++ Q T +R Y RKS+ EYD
Sbjct: 11 QNSPSRKDGISFEIEDNLRRYGTEVIQEAGILLELPQATTVTGQVIFQRFYCRKSLKEYD 70
Query: 126 PHLVAPTCLYLASKAEESTVQAR--LLVFYI---KKI-----YSDE-KYRY-EVK-DILE 172
+A L++++K E + R L VF + KK Y D K Y ++K D++
Sbjct: 71 VKTLAMGSLFVSTKFTEPQRKIRDILNVFTLIWQKKEGLPIDYIDTTKQAYWDLKGDVIA 130
Query: 173 MEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHL 232
E IL+ + + V P++ ++ +++ + + SW LND+ + + + + P
Sbjct: 131 AEFDILKEFGFLMYVDLPHKYILNYMKLLERSK-ELAQKSWNYLNDSMRTTITIQYKPES 189
Query: 233 IALACIYIAS 242
IA + I++AS
Sbjct: 190 IAASSIFLAS 199
>UNIPROTKB|P0C7Q3 [details] [associations]
symbol:FAM58BP "Putative cyclin-related protein FAM58B"
species:9606 "Homo sapiens" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
PANTHER:PTHR10026 HOVERGEN:HBG050836 EMBL:AL590126 IPI:IPI00383232
RefSeq:NP_001098987.1 UniGene:Hs.705355 ProteinModelPortal:P0C7Q3
SMR:P0C7Q3 DMDM:193806028 PRIDE:P0C7Q3 DNASU:339521 GeneID:339521
KEGG:hsa:339521 UCSC:uc009wzi.1 CTD:339521 GeneCards:GC01P200184
HGNC:HGNC:27373 neXtProt:NX_P0C7Q3 PharmGKB:PA142671864
GenomeRNAi:339521 NextBio:97448 CleanEx:HS_FAM58B
Genevestigator:P0C7Q3 Uniprot:P0C7Q3
Length = 252
Score = 126 (49.4 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 39/157 (24%), Positives = 76/157 (48%)
Query: 105 VATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSD---- 160
+ATA T + + + +DP+L+A + +YLA K EE + A ++ + ++
Sbjct: 52 IATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDIISVSNRYFNPSSEP 111
Query: 161 ---EKYRYEVKD-ILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDIN--------M 208
+ +E++D I++ E+ +L L + + HP++ L+ +L N +N +
Sbjct: 112 LGLDSRLWELRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYLVSL-KNWLNCHSWQRTPV 170
Query: 209 THLSWGILNDTYKMDLILVHPPHLIALACIYIA-SVY 244
+W +L D+Y L L IA+ +Y+A VY
Sbjct: 171 AVTAWALLRDSYHGGLCLRFQAQHIAVVVLYLALQVY 207
>POMBASE|SPBC530.13 [details] [associations]
symbol:lsc1 "Lsk1 associated cyclin" species:4896
"Schizosaccharomyces pombe" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=TAS] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0031031 "positive regulation of septation
initiation signaling cascade" evidence=IMP] [GO:0031124 "mRNA
3'-end processing" evidence=ISO] [GO:0031565 "cytokinesis
checkpoint" evidence=IMP] [GO:0032806 "carboxy-terminal domain
protein kinase complex" evidence=IPI] [GO:1901407 "regulation of
phosphorylation of RNA polymerase II C-terminal domain"
evidence=IMP] InterPro:IPR015429 PomBase:SPBC530.13 GO:GO:0005829
GO:GO:0000079 GO:GO:0006355 EMBL:CU329671 GO:GO:0006351
GenomeReviews:CU329671_GR Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031565 GO:GO:0016538 eggNOG:COG5333 PANTHER:PTHR10026
GO:GO:1901407 GO:GO:0031124 GO:GO:0002182 GO:GO:0045903
GO:GO:0031031 GO:GO:0032806 PIR:T40529 RefSeq:NP_595326.2
STRING:O59748 GeneID:2540879 OrthoDB:EOG4XWK6C NextBio:20801995
Uniprot:O59748
Length = 335
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/124 (29%), Positives = 64/124 (51%)
Query: 130 APTCLYLASKAEESTVQAR--LLVFYIKK-----IYSDEKYRYEV-----KDILEMEMKI 177
A CL +ASK E++ + R LL Y++K + + + Y++ K IL +E
Sbjct: 84 ATACLVVASKIEDTAKKFRDILLAHYLQKHPGSEVDAHSQVCYKLIEENKKRILGLERMT 143
Query: 178 LEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALAC 237
LE + + V HP+ +V+F + + + ++W + D YK +L +P H++A+A
Sbjct: 144 LELICFDFRVRHPHNYMVKFAKSLKFSS-STASIAWNVCTDAYKTYTMLKYPAHIVAVAS 202
Query: 238 IYIA 241
I IA
Sbjct: 203 ISIA 206
>CGD|CAL0002756 [details] [associations]
symbol:orf19.4542 species:5476 "Candida albicans" [GO:0070985
"TFIIK complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0071901 "negative regulation of protein
serine/threonine kinase activity" evidence=IEA] [GO:0070816
"phosphorylation of RNA polymerase II C-terminal domain"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=IEA]
InterPro:IPR015429 InterPro:IPR027081 CGD:CAL0002756 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG5333 PANTHER:PTHR10026 KO:K06634 GO:GO:0005675
PANTHER:PTHR10026:SF8 EMBL:AACQ01000143 EMBL:AACQ01000140
RefSeq:XP_712873.1 RefSeq:XP_712967.1 ProteinModelPortal:Q59T89
STRING:Q59T89 GeneID:3645435 GeneID:3645529 KEGG:cal:CaO19.12017
KEGG:cal:CaO19.4542 Uniprot:Q59T89
Length = 395
Score = 124 (48.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 30/102 (29%), Positives = 55/102 (53%)
Query: 99 KVRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIY 158
K+ +V TA ++ ++ Y S+ E+ P V TC++LA+K+E + + Y+K +
Sbjct: 117 KMPTQVRLTAASFFKKFYLVNSVMEFHPKNVLYTCIFLAAKSENYFIS---IESYVKALK 173
Query: 159 SDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQD 200
+ IL++E +L++L + L+V HP R+L F D
Sbjct: 174 GTD-----TSHILDLEFIVLQSLKFTLLVHHPIRALYGFFLD 210
>UNIPROTKB|E1BCT0 [details] [associations]
symbol:E1BCT0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070985 "TFIIK complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GO:GO:0005675 PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 OMA:ACFYLAM EMBL:DAAA02043038 IPI:IPI00692730
Ensembl:ENSBTAT00000015470 Uniprot:E1BCT0
Length = 323
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 104 VVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKY 163
VV TA Y + Y S+ +Y P ++ TC +LA K +E V + EK
Sbjct: 80 VVGTACMYFKSFYLNNSVMKYHPWIIMLTCEFLACKVDEFNVSRPQFGNLWESPLVQEK- 138
Query: 164 RYEVKDILEMEMKILEALNYYLVVFHPYR 192
++ ILE E+ +++ LN++L+V +PYR
Sbjct: 139 --ALEQILEYEL-LIQQLNFHLIVHNPYR 164
>TAIR|locus:2124331 [details] [associations]
symbol:CYCD3;1 "CYCLIN D3;1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0009744 "response to sucrose stimulus"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IGI;RCA]
[GO:0048316 "seed development" evidence=IGI] [GO:0000280 "nuclear
division" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0010075 "regulation of meristem
growth" evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0051225 "spindle assembly" evidence=RCA] InterPro:IPR004367
Pfam:PF02984 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009735 GO:GO:0051301 GO:GO:0007067 GO:GO:0000082
GO:GO:0009744 GO:GO:0042127 GO:GO:0048316 EMBL:AL021961
EMBL:AL161584 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0009741 eggNOG:COG5024 PROSITE:PS00292 HOGENOM:HOG000242458
EMBL:X83371 EMBL:AK221712 IPI:IPI00527030 PIR:T05420
RefSeq:NP_195142.1 UniGene:At.22721 ProteinModelPortal:P42753
SMR:P42753 IntAct:P42753 STRING:P42753 EnsemblPlants:AT4G34160.1
GeneID:829564 KEGG:ath:AT4G34160 GeneFarm:3380 TAIR:At4g34160
InParanoid:P42753 KO:K14505 OMA:ALYCEEE PhylomeDB:P42753
ProtClustDB:CLSN2684389 Genevestigator:P42753 GermOnline:AT4G34160
Uniprot:P42753
Length = 376
Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
Identities = 41/161 (25%), Positives = 74/161 (45%)
Query: 108 AVTYMRRCYTRKSMTEYDP---HLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYR 164
A+TY+ + S+ P LV+ CL LA+K EE+ V LL F ++ + KY
Sbjct: 111 AITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPL-LLDFQVE----ETKYV 165
Query: 165 YEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDL 224
+E K I ME+ IL L + + + P + ++ G+ N H W LN +++ L
Sbjct: 166 FEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLK--NNAH--WDFLNKCHRLLL 221
Query: 225 ILVHPPHLIAL--ACIYIASVYREKDNTAWFEELRVDMNVV 263
++ + + + A++ R + F+ L N++
Sbjct: 222 SVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNLL 262
>DICTYBASE|DDB_G0279085 [details] [associations]
symbol:cycA "cyclin" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR004367
Pfam:PF02984 dictyBase:DDB_G0279085 GO:GO:0005634
GenomeReviews:CM000152_GR EMBL:AAFI02000027 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 eggNOG:COG5024 PROSITE:PS00292
RefSeq:XP_001134569.1 ProteinModelPortal:Q1ZXI1
EnsemblProtists:DDB0231774 GeneID:8621862 KEGG:ddi:DDB_G0279085
InParanoid:Q1ZXI1 OMA:ACAFFIA Uniprot:Q1ZXI1
Length = 588
Score = 116 (45.9 bits), Expect = 0.00052, P = 0.00052
Identities = 44/169 (26%), Positives = 85/169 (50%)
Query: 100 VRQRVVATAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEE-STVQARLLVFYIKKIY 158
V+ + ++ + R + + +T + ++ ++A+K EE Q + + I
Sbjct: 374 VKNETIYLSINILDRYLSLQPVTRNEFQMIGACAFFIAAKYEEYKGAQPQFI------IQ 427
Query: 159 SDEKYRYEVKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAGMNDIN-MTHLSWGILN 217
S ++ + V +LE E K+L+ LN+ L L ++L G +DI+ + HL +G L+
Sbjct: 428 SAGEF-FNVDQLLECECKMLKTLNFSLCTPTIKFFLGRYLIAVGDSDISHVAHL-FGELS 485
Query: 218 DTYKMDLILVHPPHLIALACIYIASVYREKD-NTAWFEELRVDMNVVSF 265
+ +LI +PP +IA AC+Y+A + +K T RV++N + F
Sbjct: 486 -LLEYNLIN-YPPSVIAAACVYLACLVLQKQWTTTLTYYCRVEVNDIYF 532
>WB|WBGene00021714 [details] [associations]
symbol:cyh-1 species:6239 "Caenorhabditis elegans"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0005675
"holo TFIIH complex" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0000079 GO:GO:0002119
GO:GO:0006355 GO:GO:0010171 GO:GO:0040011 GO:GO:0040035
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG5333
PANTHER:PTHR10026 HSSP:P51946 KO:K06634 GO:GO:0005675
PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634 OMA:ACFYLAM
EMBL:FO080566 RefSeq:NP_494564.2 ProteinModelPortal:Q9N4U0
SMR:Q9N4U0 STRING:Q9N4U0 PaxDb:Q9N4U0 EnsemblMetazoa:Y49F6B.1
GeneID:190078 KEGG:cel:CELE_Y49F6B.1 UCSC:Y49F6B.1 CTD:190078
WormBase:Y49F6B.1 HOGENOM:HOG000021232 InParanoid:Q9N4U0
NextBio:944568 Uniprot:Q9N4U0
Length = 332
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 37/139 (26%), Positives = 68/139 (48%)
Query: 107 TAVTYMRRCYTRKSMTEYDPHLVAPTCLYLASKAEESTVQARLLVFYIKKIYSDEKYRYE 166
TA+ + +R + ++ +V C YLA K +E + + ++K + E R
Sbjct: 80 TALAFFKRAFLVWVPSDTSIRMVMMACFYLAMKIDEFYIT---IEDFVKNMNVGEP-RQN 135
Query: 167 VKDILEMEMKILEALNYYLVVFHPYRSLVQFLQDAG-----MN-DI-NMTHLSWGILNDT 219
+ IL++E ++++ L+Y L V PYR L D +N D+ ++ S +
Sbjct: 136 AERILKLEPELMKILDYNLTVHCPYRPYEGHLMDMKTRMLLLNFDLESIRRDSMRFFQNA 195
Query: 220 YKMDLILVHPPHLIALACI 238
+ D++L++PP IALA I
Sbjct: 196 LQTDVLLLYPPSQIALAAI 214
>GENEDB_PFALCIPARUM|PF13_0022 [details] [associations]
symbol:cyc-4 "cyclin 4" species:5833
"Plasmodium falciparum" [GO:0000079 "regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=ISS]
InterPro:IPR015429 InterPro:IPR017060 PIRSF:PIRSF036580
GO:GO:0000079 GO:GO:0006355 GO:GO:0006396 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 EMBL:AL844509 PANTHER:PTHR10026
GenomeReviews:AL844509_GR OMA:NTHVALP RefSeq:XP_001349774.1
ProteinModelPortal:Q76NM8 EnsemblProtists:PF13_0022:mRNA
GeneID:814001 KEGG:pfa:PF13_0022 EuPathDB:PlasmoDB:PF3D7_1304700
HOGENOM:HOG000265217 ProtClustDB:CLSZ2432906 Uniprot:Q76NM8
Length = 262
Score = 110 (43.8 bits), Expect = 0.00063, P = 0.00063
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 161 EKYRYEVKDILEMEMKILEALNYYL--VVFHPYRSLVQFLQDAGMNDINMTH-------- 210
E+Y+ DI E+ IL+ + + + + HP+ L+ ++ N++N H
Sbjct: 132 EEYKNMKVDIYTYELLILKEIGFLVHKINQHPHSFLLPYIHSL-FNNLNTIHKDLTKKLA 190
Query: 211 -LSWGILNDTYKMDLILVHPPHLIALACIYIASVYREK----DNTAWFEELRVD 259
+SWG LND+ + L + P IA+A I++A+ Y+ +NT WF+ V+
Sbjct: 191 QMSWGFLNDSMRTTLCCEYQPRCIAVASIFLAA-YKLNIPLMNNTNWFKLFDVE 243
>UNIPROTKB|Q76NM8 [details] [associations]
symbol:Pfcyc-4 "Cyclin" species:36329 "Plasmodium
falciparum 3D7" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=ISS] InterPro:IPR015429
InterPro:IPR017060 PIRSF:PIRSF036580 GO:GO:0000079 GO:GO:0006355
GO:GO:0006396 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
EMBL:AL844509 PANTHER:PTHR10026 GenomeReviews:AL844509_GR
OMA:NTHVALP RefSeq:XP_001349774.1 ProteinModelPortal:Q76NM8
EnsemblProtists:PF13_0022:mRNA GeneID:814001 KEGG:pfa:PF13_0022
EuPathDB:PlasmoDB:PF3D7_1304700 HOGENOM:HOG000265217
ProtClustDB:CLSZ2432906 Uniprot:Q76NM8
Length = 262
Score = 110 (43.8 bits), Expect = 0.00063, P = 0.00063
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 161 EKYRYEVKDILEMEMKILEALNYYL--VVFHPYRSLVQFLQDAGMNDINMTH-------- 210
E+Y+ DI E+ IL+ + + + + HP+ L+ ++ N++N H
Sbjct: 132 EEYKNMKVDIYTYELLILKEIGFLVHKINQHPHSFLLPYIHSL-FNNLNTIHKDLTKKLA 190
Query: 211 -LSWGILNDTYKMDLILVHPPHLIALACIYIASVYREK----DNTAWFEELRVD 259
+SWG LND+ + L + P IA+A I++A+ Y+ +NT WF+ V+
Sbjct: 191 QMSWGFLNDSMRTTLCCEYQPRCIAVASIFLAA-YKLNIPLMNNTNWFKLFDVE 243
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 265 265 0.00093 114 3 11 22 0.42 33
32 0.50 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 138
No. of states in DFA: 618 (66 KB)
Total size of DFA: 216 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.40u 0.10s 22.50t Elapsed: 00:00:02
Total cpu time: 22.42u 0.10s 22.52t Elapsed: 00:00:02
Start: Fri May 10 13:32:45 2013 End: Fri May 10 13:32:47 2013
WARNINGS ISSUED: 1